Carg12775 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg12775
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	protein SPOROCYTELESS
Location	Carg_Chr09: 4984799 .. 4985960 (+)
RNA-Seq Expression	Carg12775
Synteny	Carg12775

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGTCTCCCATGGTGGTGATAGAAGAAACCAAGCCCGGCGAGCCTCACAAAACCAGAGCCGCCAGAAAAACCGCCGCCAAAAATCCCCACCACAAAAAACCGCCGCAGAGAGGCCTCGGCGTTGCTCAGCTCGAACGCTTAAGGCTTCAAGAACGGTGGAAGAAAATGACCGAAATCTCCCCTCCCCATCCCTTCCAATCCCACTCCCCCTTCCTCCTCGATTTCCCCTTGCAGTTCCCCGCCGCCGCCGCCGGAGGTAATGACTATGCTACCGGCGTTTTGGGGTTCATCGGAAATGGTGGGTTTGGCGGCGGCGGCGGCGGTGGTGGACTGATGACCATGGAGCCGTTTCCACACGGCGGTGGAGCCATGGTGGACCCCAGACTTTTGATTGGAAATAGCGTTGAGGCTTCCAGAGAGCTCTCTTCAATCCCAAACTTGCCGCCTCCACCACCACCGCCACCGCCTCCTCCGCCGTGTGTTTCTGATCGTTGTGATATTTGCTTTAAGGTAAAATCTCTATAATCCAATATATATTTTACAAAATCCATTTGGAATTTAAACATCGCGATTTTTTATTCCCAGAAGAAACGAGTCAATTTCAGCAATACAATGAAAGAGAAGAACATCATCGGAACTGCAGAGCCGCCGCCACCGGCGGCGGCGAGTTTCGATTTTCTCGGCCTGAATACAAATTCCGCCGCCACAGATTTCGATTTCAGTTTAAATTTCAACCAGGTGATTCAAAAACAAAAACCCAGAAAAACCCAGATCATGACATTCCAAAACAAACCCGAAATTTAACGATCTTCTTGTCGGTGTAATGAAACAGGACGGAGCAGGGGTTAAGCAAATACACCGGAAAGTGGCCGGGAAGGGCGGCGGCGGCGGCGGTGAAGGAAGTACATTAATGGAGTACGAGTTTTTTCCAAGGAAAAATGGCAGAGGAACAGAGTTGGAGGAGCGGAAAAGGGCAAATGAAGAATTGGGATTATTTGCAGAGGAAGAAGAAGAGGAAGAAGAAGAAGAAGAAGAAGAAGCAGTACAGGCGGTGGATCATGGAGAAGGTTCTTGTATCACTACGAGCTGCAGTGATATCATTAATGGCGGTACCAGAAATTCCACTGTTCTTGATTTGTCTCTTAAGCTTTCATTTTAG

mRNA sequence

ATGGCGTCTCCCATGGTGGTGATAGAAGAAACCAAGCCCGGCGAGCCTCACAAAACCAGAGCCGCCAGAAAAACCGCCGCCAAAAATCCCCACCACAAAAAACCGCCGCAGAGAGGCCTCGGCGTTGCTCAGCTCGAACGCTTAAGGCTTCAAGAACGGTGGAAGAAAATGACCGAAATCTCCCCTCCCCATCCCTTCCAATCCCACTCCCCCTTCCTCCTCGATTTCCCCTTGCAGTTCCCCGCCGCCGCCGCCGGAGGTAATGACTATGCTACCGGCGTTTTGGGGTTCATCGGAAATGGTGGGTTTGGCGGCGGCGGCGGCGGTGGTGGACTGATGACCATGGAGCCGTTTCCACACGGCGGTGGAGCCATGGTGGACCCCAGACTTTTGATTGGAAATAGCGTTGAGGCTTCCAGAGAGCTCTCTTCAATCCCAAACTTGCCGCCTCCACCACCACCGCCACCGCCTCCTCCGCCGTGTGTTTCTGATCGTTGTGATATTTGCTTTAAGAAGAAACGAGTCAATTTCAGCAATACAATGAAAGAGAAGAACATCATCGGAACTGCAGAGCCGCCGCCACCGGCGGCGGCGAGTTTCGATTTTCTCGGCCTGAATACAAATTCCGCCGCCACAGATTTCGATTTCAGTTTAAATTTCAACCAGGACGGAGCAGGGGTTAAGCAAATACACCGGAAAGTGGCCGGGAAGGGCGGCGGCGGCGGCGGTGAAGGAAGTACATTAATGGAGTACGAGTTTTTTCCAAGGAAAAATGGCAGAGGAACAGAGTTGGAGGAGCGGAAAAGGGCAAATGAAGAATTGGGATTATTTGCAGAGGAAGAAGAAGAGGAAGAAGAAGAAGAAGAAGAAGAAGCAGTACAGGCGGTGGATCATGGAGAAGGTTCTTGTATCACTACGAGCTGCAGTGATATCATTAATGGCGGTACCAGAAATTCCACTGTTCTTGATTTGTCTCTTAAGCTTTCATTTTAG

Coding sequence (CDS)

ATGGCGTCTCCCATGGTGGTGATAGAAGAAACCAAGCCCGGCGAGCCTCACAAAACCAGAGCCGCCAGAAAAACCGCCGCCAAAAATCCCCACCACAAAAAACCGCCGCAGAGAGGCCTCGGCGTTGCTCAGCTCGAACGCTTAAGGCTTCAAGAACGGTGGAAGAAAATGACCGAAATCTCCCCTCCCCATCCCTTCCAATCCCACTCCCCCTTCCTCCTCGATTTCCCCTTGCAGTTCCCCGCCGCCGCCGCCGGAGGTAATGACTATGCTACCGGCGTTTTGGGGTTCATCGGAAATGGTGGGTTTGGCGGCGGCGGCGGCGGTGGTGGACTGATGACCATGGAGCCGTTTCCACACGGCGGTGGAGCCATGGTGGACCCCAGACTTTTGATTGGAAATAGCGTTGAGGCTTCCAGAGAGCTCTCTTCAATCCCAAACTTGCCGCCTCCACCACCACCGCCACCGCCTCCTCCGCCGTGTGTTTCTGATCGTTGTGATATTTGCTTTAAGAAGAAACGAGTCAATTTCAGCAATACAATGAAAGAGAAGAACATCATCGGAACTGCAGAGCCGCCGCCACCGGCGGCGGCGAGTTTCGATTTTCTCGGCCTGAATACAAATTCCGCCGCCACAGATTTCGATTTCAGTTTAAATTTCAACCAGGACGGAGCAGGGGTTAAGCAAATACACCGGAAAGTGGCCGGGAAGGGCGGCGGCGGCGGCGGTGAAGGAAGTACATTAATGGAGTACGAGTTTTTTCCAAGGAAAAATGGCAGAGGAACAGAGTTGGAGGAGCGGAAAAGGGCAAATGAAGAATTGGGATTATTTGCAGAGGAAGAAGAAGAGGAAGAAGAAGAAGAAGAAGAAGAAGCAGTACAGGCGGTGGATCATGGAGAAGGTTCTTGTATCACTACGAGCTGCAGTGATATCATTAATGGCGGTACCAGAAATTCCACTGTTCTTGATTTGTCTCTTAAGCTTTCATTTTAG

Protein sequence

MASPMVVIEETKPGEPHKTRAARKTAAKNPHHKKPPQRGLGVAQLERLRLQERWKKMTEISPPHPFQSHSPFLLDFPLQFPAAAAGGNDYATGVLGFIGNGGFGGGGGGGGLMTMEPFPHGGGAMVDPRLLIGNSVEASRELSSIPNLPPPPPPPPPPPPCVSDRCDICFKKKRVNFSNTMKEKNIIGTAEPPPPAAASFDFLGLNTNSAATDFDFSLNFNQDGAGVKQIHRKVAGKGGGGGGEGSTLMEYEFFPRKNGRGTELEERKRANEELGLFAEEEEEEEEEEEEEAVQAVDHGEGSCITTSCSDIINGGTRNSTVLDLSLKLSF

Homology

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BLAST of Carg12775 vs. NCBI nr
Match: KAG7024875.1 (hypothetical protein SDJN02_13694, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 640.6 bits (1651), Expect = 7.6e-180
Identity = 330/330 (100.00%), Postives = 330/330 (100.00%), Query Frame = 0


Query: 1   MASPMVVIEETKPGEPHKTRAARKTAAKNPHHKKPPQRGLGVAQLERLRLQERWKKMTEI 60
           MASPMVVIEETKPGEPHKTRAARKTAAKNPHHKKPPQRGLGVAQLERLRLQERWKKMTEI
Sbjct: 1   MASPMVVIEETKPGEPHKTRAARKTAAKNPHHKKPPQRGLGVAQLERLRLQERWKKMTEI 60

Query: 61  SPPHPFQSHSPFLLDFPLQFPAAAAGGNDYATGVLGFIGNGGFGGGGGGGGLMTMEPFPH 120
           SPPHPFQSHSPFLLDFPLQFPAAAAGGNDYATGVLGFIGNGGFGGGGGGGGLMTMEPFPH
Sbjct: 61  SPPHPFQSHSPFLLDFPLQFPAAAAGGNDYATGVLGFIGNGGFGGGGGGGGLMTMEPFPH 120

Query: 121 GGGAMVDPRLLIGNSVEASRELSSIPNLPPPPPPPPPPPPCVSDRCDICFKKKRVNFSNT 180
           GGGAMVDPRLLIGNSVEASRELSSIPNLPPPPPPPPPPPPCVSDRCDICFKKKRVNFSNT
Sbjct: 121 GGGAMVDPRLLIGNSVEASRELSSIPNLPPPPPPPPPPPPCVSDRCDICFKKKRVNFSNT 180

Query: 181 MKEKNIIGTAEPPPPAAASFDFLGLNTNSAATDFDFSLNFNQDGAGVKQIHRKVAGKGGG 240
           MKEKNIIGTAEPPPPAAASFDFLGLNTNSAATDFDFSLNFNQDGAGVKQIHRKVAGKGGG
Sbjct: 181 MKEKNIIGTAEPPPPAAASFDFLGLNTNSAATDFDFSLNFNQDGAGVKQIHRKVAGKGGG 240

Query: 241 GGGEGSTLMEYEFFPRKNGRGTELEERKRANEELGLFAEEEEEEEEEEEEEAVQAVDHGE 300
           GGGEGSTLMEYEFFPRKNGRGTELEERKRANEELGLFAEEEEEEEEEEEEEAVQAVDHGE
Sbjct: 241 GGGEGSTLMEYEFFPRKNGRGTELEERKRANEELGLFAEEEEEEEEEEEEEAVQAVDHGE 300

Query: 301 GSCITTSCSDIINGGTRNSTVLDLSLKLSF 331
           GSCITTSCSDIINGGTRNSTVLDLSLKLSF
Sbjct: 301 GSCITTSCSDIINGGTRNSTVLDLSLKLSF 330

[Close]

BLAST of Carg12775 vs. NCBI nr
Match: XP_022936226.1 (protein virilizer homolog [Cucurbita moschata])

HSP 1 Score: 625.5 bits (1612), Expect = 2.5e-175
Identity = 326/331 (98.49%), Postives = 327/331 (98.79%), Query Frame = 0


Query: 1   MASPMVVIEETKPGEPHKTRAARKTAAKNPHHKKPPQRGLGVAQLERLRLQERWKKMTEI 60
           MASPMVVIEETKPGEP KTRAARKTAAKNPHHKKPPQRGLGVAQLERLRLQERWKKMTEI
Sbjct: 1   MASPMVVIEETKPGEPLKTRAARKTAAKNPHHKKPPQRGLGVAQLERLRLQERWKKMTEI 60

Query: 61  SPPHPFQSHSPFLLDFPLQFPAAAAGGNDYATGVLGFIGNGGFGGGGGGGGLMTMEPFPH 120
           SPPHPFQSHSPFLLDFPLQF AAAAGGNDYATGVLGFIGNGGFGGGGGGGGLMTMEPFPH
Sbjct: 61  SPPHPFQSHSPFLLDFPLQFSAAAAGGNDYATGVLGFIGNGGFGGGGGGGGLMTMEPFPH 120

Query: 121 GGGAMVDPRLLIGNSVEASRELSSIPNLPPPPPPPPPPPPCVSDRCDICFKKKRVNFSNT 180
           GGGAMVDPRLLIGNSVEASRELSSIPNLPPPPPPPPPPPPCVSDRCDICFKKKRVNFSNT
Sbjct: 121 GGGAMVDPRLLIGNSVEASRELSSIPNLPPPPPPPPPPPPCVSDRCDICFKKKRVNFSNT 180

Query: 181 MKEKNIIGTAE-PPPPAAASFDFLGLNTNSAATDFDFSLNFNQDGAGVKQIHRKVAGKGG 240
           MKEKNIIGTAE PPPPA ASFDFLGLNTNSAATDFDFSLNFNQ+GAGVKQIHRKVAGKGG
Sbjct: 181 MKEKNIIGTAEPPPPPAVASFDFLGLNTNSAATDFDFSLNFNQEGAGVKQIHRKVAGKGG 240

Query: 241 GGGGEGSTLMEYEFFPRKNGRGTELEERKRANEELGLFAEEEEEEEEEEEEEAVQAVDHG 300
           GGGGEGSTLMEYEFFPRKNGRGTELEERKRANEELGLFAEEEEEEEEEEEEEAVQAVDHG
Sbjct: 241 GGGGEGSTLMEYEFFPRKNGRGTELEERKRANEELGLFAEEEEEEEEEEEEEAVQAVDHG 300

Query: 301 EGSCITTSCSDIINGGTRNSTVLDLSLKLSF 331
           EGSCITTSCSDIINGGTRNSTVLDLSLKLSF
Sbjct: 301 EGSCITTSCSDIINGGTRNSTVLDLSLKLSF 331

[Close]

BLAST of Carg12775 vs. NCBI nr
Match: KAG6591999.1 (hypothetical protein SDJN03_14345, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 607.1 bits (1564), Expect = 9.3e-170
Identity = 325/334 (97.31%), Postives = 325/334 (97.31%), Query Frame = 0


Query: 1   MASPMVVIEETKPGEPHKTRAARKTAAKNPHHKKPPQRGLGVAQLERLRLQERWKKMTEI 60
           MASPMVVIEETKPGEP KTRAARKTAAKNPHHKKPPQRGLGVAQLERLRLQERWKKMTEI
Sbjct: 1   MASPMVVIEETKPGEPLKTRAARKTAAKNPHHKKPPQRGLGVAQLERLRLQERWKKMTEI 60

Query: 61  SPPHPFQSHSPFLLDFPLQFPAAAAGGNDYATGVLGFIGNGGFGGGGGGGGLMTMEPFPH 120
           SPPHPFQSHSPFLLDFPLQFPAAAAGGNDYATGVLGFIGNGGF GGGG GGLMTMEPFPH
Sbjct: 61  SPPHPFQSHSPFLLDFPLQFPAAAAGGNDYATGVLGFIGNGGF-GGGGCGGLMTMEPFPH 120

Query: 121 GGGAMVDPRLLIGNSVEASRELSSIPNLPPPPPPPPPPPPCVSDRCDICFKKKRVNFSNT 180
           GGGAMVD RLLIGNSVEASRELSSIPNLPPPPPPPPPPPPCVSDRCDICF KKRVNFSNT
Sbjct: 121 GGGAMVDHRLLIGNSVEASRELSSIPNLPPPPPPPPPPPPCVSDRCDICF-KKRVNFSNT 180

Query: 181 MKEKNIIGTAE-PPPPAAASFDFLGLNTNSAATDFDFSLNFNQDGAGVKQIHRKVAGKGG 240
           MKEKNIIGTAE PPPPAAASFDFLGLNTNSAATDFDFSLNFNQDGAGVKQIHRKVAGKGG
Sbjct: 181 MKEKNIIGTAEPPPPPAAASFDFLGLNTNSAATDFDFSLNFNQDGAGVKQIHRKVAGKGG 240

Query: 241 GGGGEGSTLMEYEFFPRKNGRGTELEERKRANEELGLFA---EEEEEEEEEEEEEAVQAV 300
           GGGGEGSTLMEYEFFPRKNGRGTELEERKRANEELGLFA   EEEEEEEEEEEEEAVQAV
Sbjct: 241 GGGGEGSTLMEYEFFPRKNGRGTELEERKRANEELGLFAEEEEEEEEEEEEEEEEAVQAV 300

Query: 301 DHGEGSCITTSCSDIINGGTRNSTVLDLSLKLSF 331
           DHGEGSCITTSCSDIINGGTRNSTVLDLSLKLSF
Sbjct: 301 DHGEGSCITTSCSDIINGGTRNSTVLDLSLKLSF 332

[Close]

BLAST of Carg12775 vs. NCBI nr
Match: XP_022975733.1 (protein SPOROCYTELESS [Cucurbita maxima])

HSP 1 Score: 543.9 bits (1400), Expect = 9.6e-151
Identity = 298/334 (89.22%), Postives = 302/334 (90.42%), Query Frame = 0


Query: 1   MASPMVVIEETKPGEPHKTRAARKTAAKNPHHKKPPQRGLGVAQLERLRLQERWKKMTEI 60
           MA+PMVVIEETKPGEP KTRAARKTAAKNPH KKPPQRGLGVAQLERLRLQERWKKMT+I
Sbjct: 1   MATPMVVIEETKPGEPLKTRAARKTAAKNPHQKKPPQRGLGVAQLERLRLQERWKKMTQI 60

Query: 61  SPPHPFQSHSPFLLDFPLQFPAAAAG----GNDYATGVLGFIGNGGFGGGGGGGGLMTME 120
           SPPH      PFLLDFPLQFP A A     GNDY TGVLGFIGN GF  G GGGGLMTME
Sbjct: 61  SPPH------PFLLDFPLQFPVAGASSAPVGNDYGTGVLGFIGNCGF--GSGGGGLMTME 120

Query: 121 PFPHGGGAMVDPRLLIGNSVEASRELSSIPNLPPPPPPPPPPPPCVSDRCDICFKKKRVN 180
           PFPHGGGAMVDPRLLIGNSVEASRELSSIPNL    PPPPPPPPCVSDRCDICFKKKRVN
Sbjct: 121 PFPHGGGAMVDPRLLIGNSVEASRELSSIPNL----PPPPPPPPCVSDRCDICFKKKRVN 180

Query: 181 FSNTMKEKNIIGTAEPPPPAAASFDFLGLNTNSAATDFDFSLNFNQDGAGVKQIHRKVAG 240
           FSNTMKEKNIIGTAEPPP    SFDFLGL+TNSAATDFDFSLNFNQDGAGVKQIHRKVAG
Sbjct: 181 FSNTMKEKNIIGTAEPPP---VSFDFLGLSTNSAATDFDFSLNFNQDGAGVKQIHRKVAG 240

Query: 241 KGGGGGGEGSTLMEYEFFPRKNGRGTELEERKRANEELGLFAEEEEEEEEEEEEEAVQAV 300
           K GGGGGEGSTLMEYEFFPRKNGRGTE EE KR NEELGLFAEEEEEE+EEEEEEAVQAV
Sbjct: 241 K-GGGGGEGSTLMEYEFFPRKNGRGTEFEELKRPNEELGLFAEEEEEEQEEEEEEAVQAV 300

Query: 301 DHGEGSCITTSCSDIINGGTRNSTVLDLSLKLSF 331
           DHGEGSCITTSCSDIINGGTRNSTVLDLSLKLSF
Sbjct: 301 DHGEGSCITTSCSDIINGGTRNSTVLDLSLKLSF 318

[Close]

BLAST of Carg12775 vs. NCBI nr
Match: XP_038900102.1 (protein SPOROCYTELESS-like [Benincasa hispida])

HSP 1 Score: 330.9 bits (847), Expect = 1.3e-86
Identity = 225/363 (61.98%), Postives = 243/363 (66.94%), Query Frame = 0


Query: 9   EETKPGEPHKTRAARKTAAKNPHHKKPPQRGLGVAQLERLRLQERWKKMTEISPPHPF-Q 68
           EETKP EP KTR  RKT A+NPH KKPPQRGLGVAQLERLRLQ++W K+TE+SPPH F Q
Sbjct: 10  EETKPHEPPKTRPGRKTGARNPHQKKPPQRGLGVAQLERLRLQDKWNKITEMSPPHHFIQ 69

Query: 69  SHSP-FLLD-----FPLQFPAAA----AGGNDYATGVLGF---------IGN-GGFGGGG 128
           SHSP FLLD     FPLQFPAAA    A  +    GVLGF         IGN GGF  GG
Sbjct: 70  SHSPTFLLDNTLTNFPLQFPAAAPVMVATDSGGGGGVLGFDHQGLVVQRIGNHGGFLAGG 129

Query: 129 GGGGLMTMEPFPHGGGAMVDPRLLIGN-SVEASRELSSIPNLPPPPPPPPPPPPCVSDRC 188
                   EP+ HGGG      +LIGN SVEASRELSSIP L    PPP  PP C SD C
Sbjct: 130 --------EPYSHGGG------VLIGNSSVEASRELSSIPKL----PPPSLPPSCDSDHC 189

Query: 189 DICFKKKRVNFSNTMKEKNI-IGTAEPPPPAAASFDFLGLNTNSAATD------------ 248
           DICFKKKRVNFSN MKEKNI I  AE PP AAA FDFLGL+T ++  +            
Sbjct: 190 DICFKKKRVNFSNLMKEKNINIAAAETPPLAAAGFDFLGLSTTNSTAELNNSTVVNHHAN 249

Query: 249 ----FDFSLNFNQDGAGVKQIHRKVAGKGGGGG-GEGST-LMEYEFFPRKNGRGTELEER 308
               F F+ NFNQ  +G        +G GGGGG GEGS+ LMEYEFFPRKN RGTE+EE 
Sbjct: 250 PDFGFSFNFNFNQGRSG----GNSGSGSGGGGGNGEGSSRLMEYEFFPRKNCRGTEIEEL 309

Query: 309 KRANEELGLFAEEEEEEEEEEEEEAVQAVDHGEGSCITTSCSDIINGGTRNSTVLDLSLK 331
           K   EEL LF EE EEEEE      V AVDHGEGSCITTSC+DIINGGTRNST LDLSLK
Sbjct: 310 KMPKEELSLFGEENEEEEE------VLAVDHGEGSCITTSCNDIINGGTRNSTALDLSLK 344

[Close]

BLAST of Carg12775 vs. ExPASy TrEMBL
Match: A0A6J1F6X7 (protein virilizer homolog OS=Cucurbita moschata OX=3662 GN=LOC111442900 PE=4 SV=1)

HSP 1 Score: 625.5 bits (1612), Expect = 1.2e-175
Identity = 326/331 (98.49%), Postives = 327/331 (98.79%), Query Frame = 0


Query: 1   MASPMVVIEETKPGEPHKTRAARKTAAKNPHHKKPPQRGLGVAQLERLRLQERWKKMTEI 60
           MASPMVVIEETKPGEP KTRAARKTAAKNPHHKKPPQRGLGVAQLERLRLQERWKKMTEI
Sbjct: 1   MASPMVVIEETKPGEPLKTRAARKTAAKNPHHKKPPQRGLGVAQLERLRLQERWKKMTEI 60

Query: 61  SPPHPFQSHSPFLLDFPLQFPAAAAGGNDYATGVLGFIGNGGFGGGGGGGGLMTMEPFPH 120
           SPPHPFQSHSPFLLDFPLQF AAAAGGNDYATGVLGFIGNGGFGGGGGGGGLMTMEPFPH
Sbjct: 61  SPPHPFQSHSPFLLDFPLQFSAAAAGGNDYATGVLGFIGNGGFGGGGGGGGLMTMEPFPH 120

Query: 121 GGGAMVDPRLLIGNSVEASRELSSIPNLPPPPPPPPPPPPCVSDRCDICFKKKRVNFSNT 180
           GGGAMVDPRLLIGNSVEASRELSSIPNLPPPPPPPPPPPPCVSDRCDICFKKKRVNFSNT
Sbjct: 121 GGGAMVDPRLLIGNSVEASRELSSIPNLPPPPPPPPPPPPCVSDRCDICFKKKRVNFSNT 180

Query: 181 MKEKNIIGTAE-PPPPAAASFDFLGLNTNSAATDFDFSLNFNQDGAGVKQIHRKVAGKGG 240
           MKEKNIIGTAE PPPPA ASFDFLGLNTNSAATDFDFSLNFNQ+GAGVKQIHRKVAGKGG
Sbjct: 181 MKEKNIIGTAEPPPPPAVASFDFLGLNTNSAATDFDFSLNFNQEGAGVKQIHRKVAGKGG 240

Query: 241 GGGGEGSTLMEYEFFPRKNGRGTELEERKRANEELGLFAEEEEEEEEEEEEEAVQAVDHG 300
           GGGGEGSTLMEYEFFPRKNGRGTELEERKRANEELGLFAEEEEEEEEEEEEEAVQAVDHG
Sbjct: 241 GGGGEGSTLMEYEFFPRKNGRGTELEERKRANEELGLFAEEEEEEEEEEEEEAVQAVDHG 300

Query: 301 EGSCITTSCSDIINGGTRNSTVLDLSLKLSF 331
           EGSCITTSCSDIINGGTRNSTVLDLSLKLSF
Sbjct: 301 EGSCITTSCSDIINGGTRNSTVLDLSLKLSF 331

[Close]

BLAST of Carg12775 vs. ExPASy TrEMBL
Match: A0A6J1IK53 (protein SPOROCYTELESS OS=Cucurbita maxima OX=3661 GN=LOC111475949 PE=4 SV=1)

HSP 1 Score: 543.9 bits (1400), Expect = 4.7e-151
Identity = 298/334 (89.22%), Postives = 302/334 (90.42%), Query Frame = 0


Query: 1   MASPMVVIEETKPGEPHKTRAARKTAAKNPHHKKPPQRGLGVAQLERLRLQERWKKMTEI 60
           MA+PMVVIEETKPGEP KTRAARKTAAKNPH KKPPQRGLGVAQLERLRLQERWKKMT+I
Sbjct: 1   MATPMVVIEETKPGEPLKTRAARKTAAKNPHQKKPPQRGLGVAQLERLRLQERWKKMTQI 60

Query: 61  SPPHPFQSHSPFLLDFPLQFPAAAAG----GNDYATGVLGFIGNGGFGGGGGGGGLMTME 120
           SPPH      PFLLDFPLQFP A A     GNDY TGVLGFIGN GF  G GGGGLMTME
Sbjct: 61  SPPH------PFLLDFPLQFPVAGASSAPVGNDYGTGVLGFIGNCGF--GSGGGGLMTME 120

Query: 121 PFPHGGGAMVDPRLLIGNSVEASRELSSIPNLPPPPPPPPPPPPCVSDRCDICFKKKRVN 180
           PFPHGGGAMVDPRLLIGNSVEASRELSSIPNL    PPPPPPPPCVSDRCDICFKKKRVN
Sbjct: 121 PFPHGGGAMVDPRLLIGNSVEASRELSSIPNL----PPPPPPPPCVSDRCDICFKKKRVN 180

Query: 181 FSNTMKEKNIIGTAEPPPPAAASFDFLGLNTNSAATDFDFSLNFNQDGAGVKQIHRKVAG 240
           FSNTMKEKNIIGTAEPPP    SFDFLGL+TNSAATDFDFSLNFNQDGAGVKQIHRKVAG
Sbjct: 181 FSNTMKEKNIIGTAEPPP---VSFDFLGLSTNSAATDFDFSLNFNQDGAGVKQIHRKVAG 240

Query: 241 KGGGGGGEGSTLMEYEFFPRKNGRGTELEERKRANEELGLFAEEEEEEEEEEEEEAVQAV 300
           K GGGGGEGSTLMEYEFFPRKNGRGTE EE KR NEELGLFAEEEEEE+EEEEEEAVQAV
Sbjct: 241 K-GGGGGEGSTLMEYEFFPRKNGRGTEFEELKRPNEELGLFAEEEEEEQEEEEEEAVQAV 300

Query: 301 DHGEGSCITTSCSDIINGGTRNSTVLDLSLKLSF 331
           DHGEGSCITTSCSDIINGGTRNSTVLDLSLKLSF
Sbjct: 301 DHGEGSCITTSCSDIINGGTRNSTVLDLSLKLSF 318

[Close]

BLAST of Carg12775 vs. ExPASy TrEMBL
Match: A0A0A0LDJ3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G850670 PE=4 SV=1)

HSP 1 Score: 287.0 bits (733), Expect = 1.0e-73
Identity = 195/338 (57.69%), Postives = 216/338 (63.91%), Query Frame = 0


Query: 15  EPHKTRAARKTAAKNPHHKKPPQRGLGVAQLERLRLQERWKKMTEISPPHPFQSHSPFLL 74
           EP KTRA RK   KNP+ KKPPQRGLGVAQLERLRLQE WK +TEISPP  F  H+P L 
Sbjct: 16  EPPKTRAGRKPGPKNPNQKKPPQRGLGVAQLERLRLQENWKTVTEISPP-TFLLHNP-LP 75

Query: 75  DFPLQFPAAAAGGNDYATGVLGFIGNGGFGGGGGGGGLMTMEPFPHGGGAMVDPRLLIGN 134
           +FPL FP A A      T  +GF  +G             ++   + GG +    +LIGN
Sbjct: 76  NFPLHFPPAPA--PILHTDCIGFDHHG-----------FVVQRIGNNGGFLPASGVLIGN 135

Query: 135 -SVEASRELSSIPNLPPPPPPPPPPPPCVSDRCDICFKKKRVNFSNTMKEKNII-GTAEP 194
            SVEASRELSSIP L         P  C SDRCD CFKKKRVN+SN MKEKNII G AE 
Sbjct: 136 TSVEASRELSSIPKL---------PLACDSDRCDHCFKKKRVNYSNRMKEKNIIVGAAET 195

Query: 195 PPPAAASFDFLGLNTNSAA-------------------TDFDFSLNFNQDGAGVKQIHRK 254
           P     SFDFLGL+TNS+A                    D D+ L+FN     +KQ    
Sbjct: 196 P-----SFDFLGLSTNSSAELNTHTHTHTVMNHHTNSDLDLDYDLSFN-----LKQ---- 255

Query: 255 VAGKGGGG-GGEGSTLMEYEFFPRKNGRGTELEERKRANEELGLFAEEEEEEEEEEEEEA 314
             G+GGGG GGEGS LMEYEFFPRKNGRGTE+EE K   EEL LF EE EEEEEE     
Sbjct: 256 --GRGGGGDGGEGSKLMEYEFFPRKNGRGTEIEELKMPKEELSLFREENEEEEEE----- 308

Query: 315 VQAVDHGEGSCITTSCSDIINGGTRNSTVLDLSLKLSF 331
           V A+DHGEGSCITTSC+DIINGGTRNST LDLSLKLSF
Sbjct: 316 VLAMDHGEGSCITTSCNDIINGGTRNSTALDLSLKLSF 308

[Close]

BLAST of Carg12775 vs. ExPASy TrEMBL
Match: A0A5A7T067 (Protein SPOROCYTELESS OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold110G001020 PE=4 SV=1)

HSP 1 Score: 281.2 bits (718), Expect = 5.6e-72
Identity = 198/358 (55.31%), Postives = 216/358 (60.34%), Query Frame = 0


Query: 1   MASPMVVIEETKPGEPHKTRAARKTAAKNPHHKKPPQRGLGVAQLERLRLQERWKKMTEI 60
           MA+P+   + +    P K RA RK   KNP+ KKPPQRGLGVAQLERLRLQE WK +TEI
Sbjct: 1   MATPLQQ-QTSNTSHPPKPRAGRKPGPKNPNQKKPPQRGLGVAQLERLRLQENWKTVTEI 60

Query: 61  SPPHPFQSHSPFLLDFPLQFPAA----------AAGGNDYATGVLGFIGNGGFGGGGGGG 120
           SPP  F  H+  L +FPL FP A          AAG    A  VLGF  +G         
Sbjct: 61  SPP-TFLLHNT-LPNFPLHFPPAPPPILHTDCIAAG----AGAVLGFDHHG--------- 120

Query: 121 GLMTMEPFPHGGGAMVDPRLLIGN-SVEASRELSSIPNLPPPPPPPPPPPPCVSDRCDIC 180
               ++   + GG +    +LIGN SVEASRELSSIP L         P  C SDRCD C
Sbjct: 121 --FVVQRIGNNGGFLPAGGVLIGNTSVEASRELSSIPKL---------PLACDSDRCDHC 180

Query: 181 FKKKRVNFSNTMKEKNIIGTAEPPPPAAASFDFLGLNTNSAA-----------------T 240
           FKKKRVNFSN MKEKNII  A   P    SFDFLGL TNS A                  
Sbjct: 181 FKKKRVNFSNRMKEKNIIAAAAETP----SFDFLGLGTNSTAELNTHSVMNHHTDSGWDL 240

Query: 241 DFDFSLNFNQDGAGVKQIHRKVAGKGGGGGGEGSTLMEYEFFPRKNGRGTELEERKRANE 300
           D+DFSLN  Q           V G GGG GGEGS LMEYEFFPRKNGRGTE+EE K   E
Sbjct: 241 DYDFSLNLKQ-----------VRG-GGGDGGEGSKLMEYEFFPRKNGRGTEIEELKMPKE 300

Query: 301 ELGLFAEEEEEEEEEEEEEAVQAVDHGEGSCITTSCSDIINGGTRNSTVLDLSLKLSF 331
           EL LF EE EEEEEE     V A+DHGEGSCITTSC+DIINGGTRNST LDLSLKLSF
Sbjct: 301 ELSLFREENEEEEEE-----VLAMDHGEGSCITTSCNDIINGGTRNSTALDLSLKLSF 310

[Close]

BLAST of Carg12775 vs. ExPASy TrEMBL
Match: A0A1S3BZ57 (uncharacterized protein LOC103494987 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103494987 PE=4 SV=1)

HSP 1 Score: 281.2 bits (718), Expect = 5.6e-72
Identity = 198/358 (55.31%), Postives = 216/358 (60.34%), Query Frame = 0


Query: 1   MASPMVVIEETKPGEPHKTRAARKTAAKNPHHKKPPQRGLGVAQLERLRLQERWKKMTEI 60
           MA+P+   + +    P K RA RK   KNP+ KKPPQRGLGVAQLERLRLQE WK +TEI
Sbjct: 1   MATPLQQ-QTSNTSHPPKPRAGRKPGPKNPNQKKPPQRGLGVAQLERLRLQENWKTVTEI 60

Query: 61  SPPHPFQSHSPFLLDFPLQFPAA----------AAGGNDYATGVLGFIGNGGFGGGGGGG 120
           SPP  F  H+  L +FPL FP A          AAG    A  VLGF  +G         
Sbjct: 61  SPP-TFLLHNT-LPNFPLHFPPAPPPILHTDCIAAG----AGAVLGFDHHG--------- 120

Query: 121 GLMTMEPFPHGGGAMVDPRLLIGN-SVEASRELSSIPNLPPPPPPPPPPPPCVSDRCDIC 180
               ++   + GG +    +LIGN SVEASRELSSIP L         P  C SDRCD C
Sbjct: 121 --FVVQRIGNNGGFLPAGGVLIGNTSVEASRELSSIPKL---------PLACDSDRCDHC 180

Query: 181 FKKKRVNFSNTMKEKNIIGTAEPPPPAAASFDFLGLNTNSAA-----------------T 240
           FKKKRVNFSN MKEKNII  A   P    SFDFLGL TNS A                  
Sbjct: 181 FKKKRVNFSNRMKEKNIIAAAAETP----SFDFLGLGTNSTAELNTHSVMNHHTDSGWDL 240

Query: 241 DFDFSLNFNQDGAGVKQIHRKVAGKGGGGGGEGSTLMEYEFFPRKNGRGTELEERKRANE 300
           D+DFSLN  Q           V G GGG GGEGS LMEYEFFPRKNGRGTE+EE K   E
Sbjct: 241 DYDFSLNLKQ-----------VRG-GGGDGGEGSKLMEYEFFPRKNGRGTEIEELKMPKE 300

Query: 301 ELGLFAEEEEEEEEEEEEEAVQAVDHGEGSCITTSCSDIINGGTRNSTVLDLSLKLSF 331
           EL LF EE EEEEEE     V A+DHGEGSCITTSC+DIINGGTRNST LDLSLKLSF
Sbjct: 301 ELSLFREENEEEEEE-----VLAMDHGEGSCITTSCNDIINGGTRNSTALDLSLKLSF 310

The following BLAST results are available for this feature:

BLAST of Carg12775 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7024875.1	7.6e-180	100.00	hypothetical protein SDJN02_13694, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022936226.1	2.5e-175	98.49	protein virilizer homolog [Cucurbita moschata]	[more]
KAG6591999.1	9.3e-170	97.31	hypothetical protein SDJN03_14345, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022975733.1	9.6e-151	89.22	protein SPOROCYTELESS [Cucurbita maxima]	[more]
XP_038900102.1	1.3e-86	61.98	protein SPOROCYTELESS-like [Benincasa hispida]	[more]

BLAST of Carg12775 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg12775 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F6X7	1.2e-175	98.49	protein virilizer homolog OS=Cucurbita moschata OX=3662 GN=LOC111442900 PE=4 SV=...	[more]
A0A6J1IK53	4.7e-151	89.22	protein SPOROCYTELESS OS=Cucurbita maxima OX=3661 GN=LOC111475949 PE=4 SV=1	[more]
A0A0A0LDJ3	1.0e-73	57.69	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G850670 PE=4 SV=1	[more]
A0A5A7T067	5.6e-72	55.31	Protein SPOROCYTELESS OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold11...	[more]
A0A1S3BZ57	5.6e-72	55.31	uncharacterized protein LOC103494987 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]

BLAST of Carg12775 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 267..298
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 277..299
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 277..294
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..41
None	No IPR available	SUPERFAMILY	101447	Formin homology 2 domain (FH2 domain)	coord: 150..160
IPR014855	Plant transcription factor NOZZLE	PFAM	PF08744	NOZZLE	coord: 15..178 e-value: 1.1E-5 score: 25.1
IPR014855	Plant transcription factor NOZZLE	PANTHER	PTHR33388:SF2	PROTEIN SPOROCYTELESS	coord: 10..330
IPR040356	SPEAR family	PANTHER	PTHR33388	OS01G0212500 PROTEIN	coord: 10..330

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg12775-RA	Carg12775-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003700	DNA-binding transcription factor activity