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Carg12686 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.AACCCTCAGTCTACAAACGGCCGCTCATCGGAGCTGTTCATTCAGTTCTCATCACCACAGCCATCTCATCATGTCAAGATTGAGAGCTGTTCTCCACCATCAGCTGGTGACGGTCGTCATCGTGGTGGCGGTGGCTGTGGCGGTGATGATCCGGTCGCTGTAGCTAAGAAACTTAAACATAATGCTAGCGAACGCGATCGTCGCAAGAAGATGAACTCTCTCTATACTTCTCTTCGCTGCTTGCTTCCATCGACAAATCGATCGGTAGGTTTTGCTTCTTCATTAGGCATGAATGTGTTAATATGTTTTTCAAATTTGGATATAAATTCTAATAGGATTGTGATATCGCACGTCGGTTAGAACAAAACATTCTTTATAAGCATGTGAAAACTTCTCTCTGTCAAACACGTTTTAAAAACCTTGAGGGGAAGCGTGAAAGGGAAAACCCAAAGAGGACAATATTCGTTAGCGGTGGGCCTGGGCTGTTACACATGGTATTAGAGCTAGACACCGGGCGATGTGTCAATGAGGAGGTTGAGCCTTGAAGGGGGTGGATACGAGGCGGTATGTCAGCAAGGACGTTGGGCCCCGAAAAGGGGTGGATTATGATATCCCACATCGGTTGGGGAGGAGAACGAAGCATTCTTTATAAGGGTGTGGAAACTCTCCCTAGCAGACTCGTTTTAAAAACCTTAAGAGGGAGCCCAAAAGGGAAAACTCAAAGAGGACAATATCTACTGGACGTAAGCTGCTACAAATGGTATTAGAGCACGGGCAATATGTCAATGAGGAGGTTGAGTCCCGAAGGGGGTGGACACGAGGCAGTGTGCCAACAAGGACGCTGGGCCCTGAAAGAAGGTGGATTGGGGAGTCCCACGTCGATTGGAGAAGAGAATGAGTGTCAGCAAGGACGTGGGCCCCGAAGGGGGGTGAACTATGATATCTCACGTCAGTTGGGGAGGAAAACAAAACATTCTTTATAGGGGTGTGGAAACCTTTTCGTATCATACACATTTTAAAAACTTTGAAGGGAAGCCCGAAAGAAAAAGTCGTTCAAAGAGGACAATATCTACTAGCGTTAGACTTAAACTAGTTAAGGAGTGTTCATGGGTTGGATTTCGTCGGGATTAGAACATTTTTTGACGGTCGAAAATCACTTCTTGCAGAAAACAATGAGTAATCCAGCCACAATATCAAGGGCTTTGAAGTATATACCTGAGCTAAGACAGCACGTGGAGGAGCTAAGGAGAAGGAAGCAAGGGCTTGAGACAAAGATAAATTCCATAACTCATGACCAACAAAAGCAAGTGAGGAAAGACAAGGAGGCCCCATGGATGGGTTGTTCTTCATGTGCTGTGAATTGGCTAAGAGAAAATGAAGCATTGCTTCAACTAACTTCTAATGATACCTTCAAACTCAAATTTTCACAAATTCTCCATTCTCTAGACGAAGAAGAACTTCTCGTTAAGACCATTTCTACCTTTCAGTCGTTCGATGGGAGGCACTTCTTTACTTTGCTCGTTCAGGTATAATTTAATATTTTTTCTATACAAATGTTCGTGGGTTGGATCGGGTCGGGTCGGATTATAATATTTTTCCGACCCAATCTAATTGTTTGAGTTGTGAATTTGTGAGATCTCACATCAGTAGGAGAGGGAAATAAAACATTCTTTGCAAGGTGTAGAAACCTCTTCATAATAGACCCGTTTTAAAACATCGAAGGAAAGCCCTATTCTCGGGTTCGTAATAACTAAAAATATTTAAGAAAACGGAGATATTTTATTTGTTTATTTAAAGTTTTAAGCCTTAATATATAATTTGATTTGATTTGATTTTATGTTTAATGCAGGCTAAGCCAAATACTCCCTCAAGAGTGCTGCAAGAGATCTTGAATAGAAAGTTC AACCCTCAGTCTACAAACGGCCGCTCATCGGAGCTGTTCATTCAGTTCTCATCACCACAGCCATCTCATCATGTCAAGATTGAGAGCTGTTCTCCACCATCAGCTGGTGACGGTCGTCATCGTGGTGGCGGTGGCTGTGGCGGTGATGATCCGGTCGCTCACGTGGAGGAGCTAAGGAGAAGGAAGCAAGGGCTTGAGACAAAGATAAATTCCATAACTCATGACCAACAAAAGCAAGTGAGGAAAGACAAGGAGGCCCCATGGATGGGTTGTTCTTCATGTGCTGTGAATTGGCTAAGAGAAAATGAAGCATTGCTTCAACTAACTTCTAATGATACCTTCAAACTCAAATTTTCACAAATTCTCCATTCTCTAGACGAAGAAGAACTTCTCGCTAAGCCAAATACTCCCTCAAGAGTGCTGCAAGAGATCTTGAATAGAAAGTTC AACCCTCAGTCTACAAACGGCCGCTCATCGGAGCTGTTCATTCAGTTCTCATCACCACAGCCATCTCATCATGTCAAGATTGAGAGCTGTTCTCCACCATCAGCTGGTGACGGTCGTCATCGTGGTGGCGGTGGCTGTGGCGGTGATGATCCGGTCGCTCACGTGGAGGAGCTAAGGAGAAGGAAGCAAGGGCTTGAGACAAAGATAAATTCCATAACTCATGACCAACAAAAGCAAGTGAGGAAAGACAAGGAGGCCCCATGGATGGGTTGTTCTTCATGTGCTGTGAATTGGCTAAGAGAAAATGAAGCATTGCTTCAACTAACTTCTAATGATACCTTCAAACTCAAATTTTCACAAATTCTCCATTCTCTAGACGAAGAAGAACTTCTCGCTAAGCCAAATACTCCCTCAAGAGTGCTGCAAGAGATCTTGAATAGAAAGTTC NPQSTNGRSSELFIQFSSPQPSHHVKIESCSPPSAGDGRHRGGGGCGGDDPVAHVEELRRRKQGLETKINSITHDQQKQVRKDKEAPWMGCSSCAVNWLRENEALLQLTSNDTFKLKFSQILHSLDEEELLAKPNTPSRVLQEILNRKF Homology
BLAST of Carg12686 vs. NCBI nr
Match: KAG7027567.1 (hypothetical protein SDJN02_11581, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 303.1 bits (775), Expect = 1.3e-78 Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 0
BLAST of Carg12686 vs. NCBI nr
Match: KAG6595594.1 (Transcription factor ORG2, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 262.3 bits (669), Expect = 2.5e-66 Identity = 147/226 (65.04%), Postives = 148/226 (65.49%), Query Frame = 0
BLAST of Carg12686 vs. NCBI nr
Match: XP_022925194.1 (transcription factor bHLH101-like [Cucurbita moschata]) HSP 1 Score: 258.8 bits (660), Expect = 2.8e-65 Identity = 144/226 (63.72%), Postives = 149/226 (65.93%), Query Frame = 0
BLAST of Carg12686 vs. NCBI nr
Match: XP_023518049.1 (transcription factor bHLH101-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 253.1 bits (645), Expect = 1.5e-63 Identity = 141/226 (62.39%), Postives = 147/226 (65.04%), Query Frame = 0
BLAST of Carg12686 vs. NCBI nr
Match: XP_022966445.1 (transcription factor bHLH101-like [Cucurbita maxima]) HSP 1 Score: 243.8 bits (621), Expect = 9.3e-61 Identity = 138/226 (61.06%), Postives = 144/226 (63.72%), Query Frame = 0
BLAST of Carg12686 vs. ExPASy TrEMBL
Match: A0A6J1EBF8 (transcription factor bHLH101-like OS=Cucurbita moschata OX=3662 GN=LOC111432509 PE=4 SV=1) HSP 1 Score: 258.8 bits (660), Expect = 1.4e-65 Identity = 144/226 (63.72%), Postives = 149/226 (65.93%), Query Frame = 0
BLAST of Carg12686 vs. ExPASy TrEMBL
Match: A0A6J1HRN3 (transcription factor bHLH101-like OS=Cucurbita maxima OX=3661 GN=LOC111466098 PE=4 SV=1) HSP 1 Score: 243.8 bits (621), Expect = 4.5e-61 Identity = 138/226 (61.06%), Postives = 144/226 (63.72%), Query Frame = 0
BLAST of Carg12686 vs. ExPASy TrEMBL
Match: A0A0A0KYH3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G434980 PE=4 SV=1) HSP 1 Score: 83.6 bits (205), Expect = 7.8e-13 Identity = 57/117 (48.72%), Postives = 68/117 (58.12%), Query Frame = 0
BLAST of Carg12686 vs. ExPASy TrEMBL
Match: A0A1S3C1M0 (transcription factor bHLH101-like OS=Cucumis melo OX=3656 GN=LOC103495812 PE=4 SV=1) HSP 1 Score: 78.6 bits (192), Expect = 2.5e-11 Identity = 54/117 (46.15%), Postives = 67/117 (57.26%), Query Frame = 0
BLAST of Carg12686 vs. ExPASy TrEMBL
Match: A0A5D3DDY1 (Transcription factor bHLH101-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1479G00120 PE=4 SV=1) HSP 1 Score: 70.5 bits (171), Expect = 6.8e-09 Identity = 42/79 (53.16%), Postives = 54/79 (68.35%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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