Carg12644 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg12644
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Ubiquitin-conjugating enzyme E2 28
Location	Carg_Chr07: 7073710 .. 7076151 (+)
RNA-Seq Expression	Carg12644
Synteny	Carg12644

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCGAAGCGTATCTTGAAGGAACTCAAGGATTTACAGAAGGATCCGCCCACGTCTTGCAGCGCTGGTATGTTCTATGAGCCTCGATCTTCCTATTTGATTATCTAATTTGATCATTTTGTTCGAATTTTATTGAATGAATTGGTTGTTTTGGAGATGTGTTTCGAGGATTAGAACGCTTGACTACGAGATATATGCGTTAATCAGTTGAGCTATGATGTGTTCTTCGGAGCAGATCATATGATTTTGATTTTTCTGTTGACCTTTTGATCTGTCTATATATATTTATATTAGAAGATATATGTGTTGATCAGTTGAGCGATGATGCGTTTTTCGTGAGCGTCGTTGACGTTTCGATCTGTCTATATGTATATTTATATTGTTTGGAGTTGTGAGATTGGAATGTTTGTTTGAATTTTGAGGATAGGTCCTGTAGCTGAAGACATGTTCCATTGGCAAGCGACCATTATGGGACCATCTGATAGTCCTTATTCAGGAGGTGTTTTTCTTGTCAATATTCATTTTCCGCCAGATTATCCTTTCAAGCCCCCCAAGGTGAATGATGTTTGTCTTCTGTTTGATGCTGATTTATGCAAGACGATTCTATGTTTATTGTTTTCGTTTCTAATAGAATAGGATCACTGTGAGATTCCACGTCGGTTGGAGAGGGAAACGAAACATTCCTTATAAGGGTGTGGAAACATCTCCATACTAGATGTGTTTTAAAATCGTGAGGTTGACGGCGATATGTAATGGGCCAAAACGACAATATATGCTAGAGGTGGGCTTGGGCTGTTACAAATGGTATCAAAGCCAGACACTAGGCACTGTGTCAATGAGGACGTTGGGCTGGGCCTCTAAGGGGGGTGGATTGTGTGATCTCACATCGGTTGGAGAGGCAATGAAATTCCTCCCTACTAGACGCGTTTTAAAATCGTGAGGCTGATGGCGATATGTAATGGGCCAAAGCATACAATATTTGTTAGTGGTGGGCTTAGGCTGTTACAAATGGTTTCAGAGACAGACATTGCCGGTGTGCTAGTGAGGATGCTGGCCCCCAAGGAGGTCGATTGTGAGATCCCACATTGGTTGGAGAGGGGAACAAAACATTTCTTATTAGGGTGTGGAAACCTCTCCCTACCAAACACGTTTTAAATCATGAGGTTGATGTCGATACATAACGGGCCAAAGTGGACAATATTTGCTAACGGCGGGTTTGGGCTGTAACAAATGGTATCAAAGCCAGACACCGGGCGGTCTGCCAGAGAGAAGGCTGAACCTCAAAGGGGGTTGGACACCAAGTGATGTGCCAGCGAGAACTCTGGACGCCCAAGGGGGGTGGATTCTGAGATCCCACGTCGGTTGGAGAGGGGAACGAAACATTCCTTATAAGGGTGCGGAAACCTCTCCCTACCAGACGCGTTTAAAAATCATGAGGCTAATGGCGATATAGAATGGGCCAAAGCAGACAATATCTGCTAGTGGTGGGCATGAGGGGTTACAACCGCCTCCACCTGAGGCTTAATGGCTTAATGATTGTGGTGTATTGTTATTCAGGTTGCTTTTAGGACCAAAGTGTTTCATCCAAATATCAATAGCAATGGAAGCATTTGTCTCGACATCCTTAAAGAACAGTGGAGCCCTGCGCTTACAATTTCTAAGGTTCGTTTGGCCTTTTCTTTTTGGATTCACTTATAGTTTATCATTTGGTTCCTAATCTTGTTATTGTGGTGTTTGCATAACTTGTGATGTTTGAGATCTATGTGCTTCTACCATAGTAAAGTGGATTTACTGTTTCGAAATTCCTTACTCGGTGGAGAATCTTAGAACACTAGAGTTATACCGACACATTCACTAACTGGGATGTATCGGTAAACAATCTAGATACTCTTTGAGCAATGATTCTCTATGCAGTTGAATGGTCCTTTCTTGTATGTCGATAATTGGGGCGTCGGGTCCTACGCCTGCGTTATCCTCATGGCCTGCACCCTACTAATCTTGGGATGACTTGCCATCCCGTAGCTTTGCGGCAGTTGAGAACCATCATTAATATCTAAACGAGTTGAGTTGAAGCTCTTAAGTCATTTTACCTACACTGCTATTAAAGAACAAGTAGCTGAGCTTGATATCTTCACTCGTCCTTTTGATCGTCGTACAAGTAGCTGAGAACTTGCATTCTCGTCGACTTTGAAGTTAAGGCCAAAGACCCGTAACCATAATCCTCCCCGAGAGAGAGAAACTAAAAAGATTTGATCGAGCAAATTCTAAAACATTGACGACATTTTCATGAAACAGGTCCTACTCTCCATATGCTCATTGCTGACCGATCCAAACCCAGACGACCCTCTCGTACCGGAGATTGCACACATGTACAAGACTGACCGAGCCAAGTACGAAGCGAGTGCAAGGAGCTGGACTCAGAAGTACGCGATGGGTTGA

mRNA sequence

ATGGCTTCGAAGCGTATCTTGAAGGAACTCAAGGATTTACAGAAGGATCCGCCCACGTCTTGCAGCGCTGGTCCTGTAGCTGAAGACATGTTCCATTGGCAAGCGACCATTATGGGACCATCTGATAGTCCTTATTCAGGAGGTGTTTTTCTTGTCAATATTCATTTTCCGCCAGATTATCCTTTCAAGCCCCCCAAGGCTGTTACAAATGGTTTCAGAGACAGACATTGCCGGTGTGCTAGTGAGGATGCTGGCCCCCAAGGAGGTCGATTCCAGACACCGGGCGGTCTGCCAGAGAGAAGGCTGAACCTCAAAGGGGGTTGGACACCAAGTGATGTGCCAGCGAGAACTCTGGACGCCCAAGGGGGGTGGATTCTGAGATCCCACGTTGCTTTTAGGACCAAAGTGTTTCATCCAAATATCAATAGCAATGGAAGCATTTGTCTCGACATCCTTAAAGAACAGTGGAGCCCTGCGCTTACAATTTCTAAGGTCCTACTCTCCATATGCTCATTGCTGACCGATCCAAACCCAGACGACCCTCTCGTACCGGAGATTGCACACATGTACAAGACTGACCGAGCCAAGTACGAAGCGAGTGCAAGGAGCTGGACTCAGAAGTACGCGATGGGTTGA

Coding sequence (CDS)

ATGGCTTCGAAGCGTATCTTGAAGGAACTCAAGGATTTACAGAAGGATCCGCCCACGTCTTGCAGCGCTGGTCCTGTAGCTGAAGACATGTTCCATTGGCAAGCGACCATTATGGGACCATCTGATAGTCCTTATTCAGGAGGTGTTTTTCTTGTCAATATTCATTTTCCGCCAGATTATCCTTTCAAGCCCCCCAAGGCTGTTACAAATGGTTTCAGAGACAGACATTGCCGGTGTGCTAGTGAGGATGCTGGCCCCCAAGGAGGTCGATTCCAGACACCGGGCGGTCTGCCAGAGAGAAGGCTGAACCTCAAAGGGGGTTGGACACCAAGTGATGTGCCAGCGAGAACTCTGGACGCCCAAGGGGGGTGGATTCTGAGATCCCACGTTGCTTTTAGGACCAAAGTGTTTCATCCAAATATCAATAGCAATGGAAGCATTTGTCTCGACATCCTTAAAGAACAGTGGAGCCCTGCGCTTACAATTTCTAAGGTCCTACTCTCCATATGCTCATTGCTGACCGATCCAAACCCAGACGACCCTCTCGTACCGGAGATTGCACACATGTACAAGACTGACCGAGCCAAGTACGAAGCGAGTGCAAGGAGCTGGACTCAGAAGTACGCGATGGGTTGA

Protein sequence

MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVNIHFPPDYPFKPPKAVTNGFRDRHCRCASEDAGPQGGRFQTPGGLPERRLNLKGGWTPSDVPARTLDAQGGWILRSHVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYEASARSWTQKYAMG

Homology

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BLAST of Carg12644 vs. NCBI nr
Match: KAG7027526.1 (Ubiquitin-conjugating enzyme E2 11, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 451.1 bits (1159), Expect = 5.4e-123
Identity = 211/211 (100.00%), Postives = 211/211 (100.00%), Query Frame = 0


Query: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVNIHFPPDY 60
           MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVNIHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVNIHFPPDY 60

Query: 61  PFKPPKAVTNGFRDRHCRCASEDAGPQGGRFQTPGGLPERRLNLKGGWTPSDVPARTLDA 120
           PFKPPKAVTNGFRDRHCRCASEDAGPQGGRFQTPGGLPERRLNLKGGWTPSDVPARTLDA
Sbjct: 61  PFKPPKAVTNGFRDRHCRCASEDAGPQGGRFQTPGGLPERRLNLKGGWTPSDVPARTLDA 120

Query: 121 QGGWILRSHVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDD 180
           QGGWILRSHVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDD
Sbjct: 121 QGGWILRSHVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDD 180

Query: 181 PLVPEIAHMYKTDRAKYEASARSWTQKYAMG 212
           PLVPEIAHMYKTDRAKYEASARSWTQKYAMG
Sbjct: 181 PLVPEIAHMYKTDRAKYEASARSWTQKYAMG 211

[Close]

BLAST of Carg12644 vs. NCBI nr
Match: BBG97621.1 (ubiquitin-conjugating enzyme 28, partial [Prunus dulcis])

HSP 1 Score: 295.0 bits (754), Expect = 5.0e-76
Identity = 153/214 (71.50%), Postives = 157/214 (73.36%), Query Frame = 0


Query: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVNIHFPPDY 60
           MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP DSPY+GGVFLV IHFPPDY
Sbjct: 21  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY 80

Query: 61  PFKPPKAVTNGF---RDRHCRCASEDAGPQGGRFQTPGGLPERRLNLKGGWTPSDVPART 120
           PFKPPK V       R+    C              P   P  +    G WT S      
Sbjct: 81  PFKPPKHVAKLLLFDREDKIVCFG------------PSLRPSSQACWLGSWTESGNLGLV 140

Query: 121 LDAQGGWILRSHVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPN 180
           L           VAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPN
Sbjct: 141 LATAHCIGEADSVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPN 200

Query: 181 PDDPLVPEIAHMYKTDRAKYEASARSWTQKYAMG 212
           PDDPLVPEIAHMYKTDRAKYE +ARSWTQKYAMG
Sbjct: 201 PDDPLVPEIAHMYKTDRAKYETTARSWTQKYAMG 222

[Close]

BLAST of Carg12644 vs. NCBI nr
Match: KAF9671181.1 (hypothetical protein SADUNF_Sadunf12G0020700 [Salix dunnii])

HSP 1 Score: 293.9 bits (751), Expect = 1.1e-75
Identity = 150/213 (70.42%), Postives = 162/213 (76.06%), Query Frame = 0


Query: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVNIHFPPDY 60
           MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP DSPY+GGVFLV IHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY 60

Query: 61  PFKPPKAVTNGFRDRHCRCASEDAGPQGGRFQTPGGLPERRLNLKGGWTPSDVP--ARTL 120
           PFKPPK   N          ++ +  +G R+     L  +       +  S  P    +L
Sbjct: 61  PFKPPKVWVNS-------TVTKASTRRGLRYVNDAALASKVFVSSINFCFSCFPFVKASL 120

Query: 121 DAQGGWILRSHVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNP 180
           ++        HVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNP
Sbjct: 121 NSWSVATASHHVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNP 180

Query: 181 DDPLVPEIAHMYKTDRAKYEASARSWTQKYAMG 212
           DDPLVPEIAHMYKTDR KYE +ARSWTQKYAMG
Sbjct: 181 DDPLVPEIAHMYKTDRNKYETTARSWTQKYAMG 206

[Close]

BLAST of Carg12644 vs. NCBI nr
Match: RYR79414.1 (hypothetical protein Ahy_A01g004226 isoform A [Arachis hypogaea])

HSP 1 Score: 292.4 bits (747), Expect = 3.2e-75
Identity = 161/247 (65.18%), Postives = 169/247 (68.42%), Query Frame = 0


Query: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVNIHFPPDY 60
           MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP+DSPY+GGVFLV+IHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPADSPYTGGVFLVSIHFPPDY 60

Query: 61  PFKPPK---------AVTNGFRDRH-----CRCAS--EDAGPQGGRFQTPGGLPER---- 120
           PFKPPK         A+   F   H     C C    ED             L  R    
Sbjct: 61  PFKPPKLGLLELLDLALVFMFIILHLYYTRCICVRGIEDCKEFKSSDDLAVSLHHRFAYG 120

Query: 121 ---RLNLKGGWTP-------------SDVPARTLDAQGGWILRSHVAFRTKVFHPNINSN 180
               +  K G  P             + + AR LD         HVAFRTKVFHPNINSN
Sbjct: 121 TYCHVTFKAGKMPCLLRWLKREYLLITLLAARCLDVTVDRFRYGHVAFRTKVFHPNINSN 180

Query: 181 GSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYEASARSW 212
           GSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYEA+ARSW
Sbjct: 181 GSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYEATARSW 240

[Close]

BLAST of Carg12644 vs. NCBI nr
Match: KHN24724.1 (Ubiquitin-conjugating enzyme E2-17 kDa [Glycine soja])

HSP 1 Score: 291.6 bits (745), Expect = 5.5e-75
Identity = 147/211 (69.67%), Postives = 158/211 (74.88%), Query Frame = 0


Query: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVNIHFPPDY 60
           MASKRI+KELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP DSPY+GGVFLV+IHFPPDY
Sbjct: 1   MASKRIVKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYTGGVFLVSIHFPPDY 60

Query: 61  PFKPPKAVTNGFRDRHCRCASEDAGPQGGRFQTPGGLPERRLNLKGGWTPSDVPARTLDA 120
           PFKPPKA++   +D+                                       A+ L +
Sbjct: 61  PFKPPKAISYPMQDQ---------------------------------------AKFLIS 120

Query: 121 QGGWILRSHVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDD 180
               +    VAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDD
Sbjct: 121 DNFSMQYCQVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDD 172

Query: 181 PLVPEIAHMYKTDRAKYEASARSWTQKYAMG 212
           PLVPEIAHMYKTDRAKYEA+ARSWTQKYAMG
Sbjct: 181 PLVPEIAHMYKTDRAKYEATARSWTQKYAMG 172

[Close]

BLAST of Carg12644 vs. ExPASy Swiss-Prot
Match: Q94F47 (Ubiquitin-conjugating enzyme E2 28 OS=Arabidopsis thaliana OX=3702 GN=UBC28 PE=1 SV=1)

HSP 1 Score: 279.6 bits (714), Expect = 2.8e-74
Identity = 144/211 (68.25%), Postives = 147/211 (69.67%), Query Frame = 0


Query: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVNIHFPPDY 60
           MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLV IHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDY 60

Query: 61  PFKPPKAVTNGFRDRHCRCASEDAGPQGGRFQTPGGLPERRLNLKGGWTPSDVPARTLDA 120
           PFKPPK                                                      
Sbjct: 61  PFKPPK------------------------------------------------------ 120

Query: 121 QGGWILRSHVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDD 180
                    VAFRTKVFHPN+NSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDD
Sbjct: 121 ---------VAFRTKVFHPNVNSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDD 148

Query: 181 PLVPEIAHMYKTDRAKYEASARSWTQKYAMG 212
           PLVPEIAHMYKTDRAKYE++ARSWTQKYAMG
Sbjct: 181 PLVPEIAHMYKTDRAKYESTARSWTQKYAMG 148

[Close]

BLAST of Carg12644 vs. ExPASy Swiss-Prot
Match: P35135 (Ubiquitin-conjugating enzyme E2-17 kDa OS=Solanum lycopersicum OX=4081 PE=2 SV=1)

HSP 1 Score: 277.7 bits (709), Expect = 1.1e-73
Identity = 143/211 (67.77%), Postives = 147/211 (69.67%), Query Frame = 0


Query: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVNIHFPPDY 60
           MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP+DSPY+GGVFLV+IHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPTDSPYAGGVFLVSIHFPPDY 60

Query: 61  PFKPPKAVTNGFRDRHCRCASEDAGPQGGRFQTPGGLPERRLNLKGGWTPSDVPARTLDA 120
           PFKPPK                                                      
Sbjct: 61  PFKPPK------------------------------------------------------ 120

Query: 121 QGGWILRSHVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDD 180
                    VAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDD
Sbjct: 121 ---------VAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDD 148

Query: 181 PLVPEIAHMYKTDRAKYEASARSWTQKYAMG 212
           PLVPEIAHMYKTDRAKYE +ARSWTQKYAMG
Sbjct: 181 PLVPEIAHMYKTDRAKYETTARSWTQKYAMG 148

[Close]

BLAST of Carg12644 vs. ExPASy Swiss-Prot
Match: P35131 (Ubiquitin-conjugating enzyme E2 8 OS=Arabidopsis thaliana OX=3702 GN=UBC8 PE=1 SV=1)

HSP 1 Score: 277.3 bits (708), Expect = 1.4e-73
Identity = 143/211 (67.77%), Postives = 147/211 (69.67%), Query Frame = 0


Query: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVNIHFPPDY 60
           MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP++SPYSGGVFLV IHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPDY 60

Query: 61  PFKPPKAVTNGFRDRHCRCASEDAGPQGGRFQTPGGLPERRLNLKGGWTPSDVPARTLDA 120
           PFKPPK                                                      
Sbjct: 61  PFKPPK------------------------------------------------------ 120

Query: 121 QGGWILRSHVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDD 180
                    VAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDD
Sbjct: 121 ---------VAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDD 148

Query: 181 PLVPEIAHMYKTDRAKYEASARSWTQKYAMG 212
           PLVPEIAHMYKTDRAKYEA+AR+WTQKYAMG
Sbjct: 181 PLVPEIAHMYKTDRAKYEATARNWTQKYAMG 148

[Close]

BLAST of Carg12644 vs. ExPASy Swiss-Prot
Match: P35132 (SUMO-conjugating enzyme UBC9 OS=Arabidopsis thaliana OX=3702 GN=UBC9 PE=1 SV=1)

HSP 1 Score: 275.4 bits (703), Expect = 5.4e-73
Identity = 142/211 (67.30%), Postives = 146/211 (69.19%), Query Frame = 0


Query: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVNIHFPPDY 60
           MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLV IHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDY 60

Query: 61  PFKPPKAVTNGFRDRHCRCASEDAGPQGGRFQTPGGLPERRLNLKGGWTPSDVPARTLDA 120
           PFKPPK                                                      
Sbjct: 61  PFKPPK------------------------------------------------------ 120

Query: 121 QGGWILRSHVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDD 180
                    VAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDD
Sbjct: 121 ---------VAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDD 148

Query: 181 PLVPEIAHMYKTDRAKYEASARSWTQKYAMG 212
           PLVPEIAHMYKTD+ KYE++AR+WTQKYAMG
Sbjct: 181 PLVPEIAHMYKTDKNKYESTARTWTQKYAMG 148

[Close]

BLAST of Carg12644 vs. ExPASy Swiss-Prot
Match: Q8S919 (Ubiquitin-conjugating enzyme E2 5B OS=Oryza sativa subsp. japonica OX=39947 GN=UBC5B PE=2 SV=1)

HSP 1 Score: 274.6 bits (701), Expect = 9.1e-73
Identity = 141/211 (66.82%), Postives = 146/211 (69.19%), Query Frame = 0


Query: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVNIHFPPDY 60
           MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQAT+MGPSDSPY+GGVFLV IHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATLMGPSDSPYAGGVFLVTIHFPPDY 60

Query: 61  PFKPPKAVTNGFRDRHCRCASEDAGPQGGRFQTPGGLPERRLNLKGGWTPSDVPARTLDA 120
           PFKPPK                                                      
Sbjct: 61  PFKPPK------------------------------------------------------ 120

Query: 121 QGGWILRSHVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDD 180
                    VA +TKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDD
Sbjct: 121 ---------VALKTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDD 148

Query: 181 PLVPEIAHMYKTDRAKYEASARSWTQKYAMG 212
           PLVPEIAHMYKTDRAKYE++ARSWTQKYAMG
Sbjct: 181 PLVPEIAHMYKTDRAKYESTARSWTQKYAMG 148

[Close]

BLAST of Carg12644 vs. ExPASy TrEMBL
Match: A0A4Y1R0J2 (Ubiquitin-conjugating enzyme 28 (Fragment) OS=Prunus dulcis OX=3755 GN=Prudu_006811 PE=3 SV=1)

HSP 1 Score: 295.0 bits (754), Expect = 2.4e-76
Identity = 153/214 (71.50%), Postives = 157/214 (73.36%), Query Frame = 0


Query: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVNIHFPPDY 60
           MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP DSPY+GGVFLV IHFPPDY
Sbjct: 21  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY 80

Query: 61  PFKPPKAVTNGF---RDRHCRCASEDAGPQGGRFQTPGGLPERRLNLKGGWTPSDVPART 120
           PFKPPK V       R+    C              P   P  +    G WT S      
Sbjct: 81  PFKPPKHVAKLLLFDREDKIVCFG------------PSLRPSSQACWLGSWTESGNLGLV 140

Query: 121 LDAQGGWILRSHVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPN 180
           L           VAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPN
Sbjct: 141 LATAHCIGEADSVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPN 200

Query: 181 PDDPLVPEIAHMYKTDRAKYEASARSWTQKYAMG 212
           PDDPLVPEIAHMYKTDRAKYE +ARSWTQKYAMG
Sbjct: 201 PDDPLVPEIAHMYKTDRAKYETTARSWTQKYAMG 222

[Close]

BLAST of Carg12644 vs. ExPASy TrEMBL
Match: A0A445EV81 (UBC core domain-containing protein OS=Arachis hypogaea OX=3818 GN=Ahy_A01g004226 PE=3 SV=1)

HSP 1 Score: 292.4 bits (747), Expect = 1.6e-75
Identity = 161/247 (65.18%), Postives = 169/247 (68.42%), Query Frame = 0


Query: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVNIHFPPDY 60
           MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP+DSPY+GGVFLV+IHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPADSPYTGGVFLVSIHFPPDY 60

Query: 61  PFKPPK---------AVTNGFRDRH-----CRCAS--EDAGPQGGRFQTPGGLPER---- 120
           PFKPPK         A+   F   H     C C    ED             L  R    
Sbjct: 61  PFKPPKLGLLELLDLALVFMFIILHLYYTRCICVRGIEDCKEFKSSDDLAVSLHHRFAYG 120

Query: 121 ---RLNLKGGWTP-------------SDVPARTLDAQGGWILRSHVAFRTKVFHPNINSN 180
               +  K G  P             + + AR LD         HVAFRTKVFHPNINSN
Sbjct: 121 TYCHVTFKAGKMPCLLRWLKREYLLITLLAARCLDVTVDRFRYGHVAFRTKVFHPNINSN 180

Query: 181 GSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYEASARSW 212
           GSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYEA+ARSW
Sbjct: 181 GSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYEATARSW 240

[Close]

BLAST of Carg12644 vs. ExPASy TrEMBL
Match: A0A7N2R3E1 (UBC core domain-containing protein OS=Quercus lobata OX=97700 PE=3 SV=1)

HSP 1 Score: 292.4 bits (747), Expect = 1.6e-75
Identity = 149/211 (70.62%), Postives = 155/211 (73.46%), Query Frame = 0


Query: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVNIHFPPDY 60
           MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP+DSPY+GGVFLV IHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPTDSPYAGGVFLVTIHFPPDY 60

Query: 61  PFKPPKAVTNGFRDRHCRCASEDAGPQGGRFQTPGGLPERRLNLKGGWTPSDVPARTLDA 120
           PFKPPKAV +   +R      +                                      
Sbjct: 61  PFKPPKAVDDQALERAFSSYDD-------------------------------------- 120

Query: 121 QGGWILRSHVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDD 180
               IL S VAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDD
Sbjct: 121 ----ILESKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDD 169

Query: 181 PLVPEIAHMYKTDRAKYEASARSWTQKYAMG 212
           PLVPEIAHMYKTDRAKYE +ARSWTQKYAMG
Sbjct: 181 PLVPEIAHMYKTDRAKYETTARSWTQKYAMG 169

[Close]

BLAST of Carg12644 vs. ExPASy TrEMBL
Match: A0A0B2QXH0 (Ubiquitin-conjugating enzyme E2-17 kDa OS=Glycine soja OX=3848 GN=glysoja_029793 PE=3 SV=1)

HSP 1 Score: 291.6 bits (745), Expect = 2.7e-75
Identity = 147/211 (69.67%), Postives = 158/211 (74.88%), Query Frame = 0


Query: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVNIHFPPDY 60
           MASKRI+KELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP DSPY+GGVFLV+IHFPPDY
Sbjct: 1   MASKRIVKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYTGGVFLVSIHFPPDY 60

Query: 61  PFKPPKAVTNGFRDRHCRCASEDAGPQGGRFQTPGGLPERRLNLKGGWTPSDVPARTLDA 120
           PFKPPKA++   +D+                                       A+ L +
Sbjct: 61  PFKPPKAISYPMQDQ---------------------------------------AKFLIS 120

Query: 121 QGGWILRSHVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDD 180
               +    VAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDD
Sbjct: 121 DNFSMQYCQVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDD 172

Query: 181 PLVPEIAHMYKTDRAKYEASARSWTQKYAMG 212
           PLVPEIAHMYKTDRAKYEA+ARSWTQKYAMG
Sbjct: 181 PLVPEIAHMYKTDRAKYEATARSWTQKYAMG 172

[Close]

BLAST of Carg12644 vs. ExPASy TrEMBL
Match: A0A5N5P2T1 (UBC core domain-containing protein OS=Salix brachista OX=2182728 GN=DKX38_000691 PE=3 SV=1)

HSP 1 Score: 290.0 bits (741), Expect = 7.8e-75
Identity = 150/211 (71.09%), Postives = 158/211 (74.88%), Query Frame = 0


Query: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVNIHFPPDY 60
           MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP DSPY+GGVFLV IHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY 60

Query: 61  PFKPPKAVTNGFRDRHCRCASEDAGPQGGRFQTPGGLPERRLNLKGGWTPSDVPARTLDA 120
           PFKPPK         H   + +  G +      P       L +    +      RT   
Sbjct: 61  PFKPPK---------HLLASKQGFGLKDFSLVCPNQAAAFSLEMS---SRDHGSLRT--- 120

Query: 121 QGGWILRSHVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDD 180
              W  R  VAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDD
Sbjct: 121 -SAW--RERVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDD 180

Query: 181 PLVPEIAHMYKTDRAKYEASARSWTQKYAMG 212
           PLVPEIAHMYKTDR+KYE +ARSWTQKYAMG
Sbjct: 181 PLVPEIAHMYKTDRSKYETTARSWTQKYAMG 193

[Close]

BLAST of Carg12644 vs. TAIR 10
Match: AT1G64230.1 (ubiquitin-conjugating enzyme 28 )

HSP 1 Score: 279.6 bits (714), Expect = 2.0e-75
Identity = 144/211 (68.25%), Postives = 147/211 (69.67%), Query Frame = 0


Query: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVNIHFPPDY 60
           MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLV IHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDY 60

Query: 61  PFKPPKAVTNGFRDRHCRCASEDAGPQGGRFQTPGGLPERRLNLKGGWTPSDVPARTLDA 120
           PFKPPK                                                      
Sbjct: 61  PFKPPK------------------------------------------------------ 120

Query: 121 QGGWILRSHVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDD 180
                    VAFRTKVFHPN+NSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDD
Sbjct: 121 ---------VAFRTKVFHPNVNSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDD 148

Query: 181 PLVPEIAHMYKTDRAKYEASARSWTQKYAMG 212
           PLVPEIAHMYKTDRAKYE++ARSWTQKYAMG
Sbjct: 181 PLVPEIAHMYKTDRAKYESTARSWTQKYAMG 148

[Close]

BLAST of Carg12644 vs. TAIR 10
Match: AT1G64230.2 (ubiquitin-conjugating enzyme 28 )

HSP 1 Score: 279.6 bits (714), Expect = 2.0e-75
Identity = 144/211 (68.25%), Postives = 147/211 (69.67%), Query Frame = 0


Query: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVNIHFPPDY 60
           MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLV IHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDY 60

Query: 61  PFKPPKAVTNGFRDRHCRCASEDAGPQGGRFQTPGGLPERRLNLKGGWTPSDVPARTLDA 120
           PFKPPK                                                      
Sbjct: 61  PFKPPK------------------------------------------------------ 120

Query: 121 QGGWILRSHVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDD 180
                    VAFRTKVFHPN+NSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDD
Sbjct: 121 ---------VAFRTKVFHPNVNSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDD 148

Query: 181 PLVPEIAHMYKTDRAKYEASARSWTQKYAMG 212
           PLVPEIAHMYKTDRAKYE++ARSWTQKYAMG
Sbjct: 181 PLVPEIAHMYKTDRAKYESTARSWTQKYAMG 148

[Close]

BLAST of Carg12644 vs. TAIR 10
Match: AT5G41700.2 (ubiquitin conjugating enzyme 8 )

HSP 1 Score: 277.3 bits (708), Expect = 1.0e-74
Identity = 143/211 (67.77%), Postives = 147/211 (69.67%), Query Frame = 0


Query: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVNIHFPPDY 60
           MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP++SPYSGGVFLV IHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPDY 60

Query: 61  PFKPPKAVTNGFRDRHCRCASEDAGPQGGRFQTPGGLPERRLNLKGGWTPSDVPARTLDA 120
           PFKPPK                                                      
Sbjct: 61  PFKPPK------------------------------------------------------ 120

Query: 121 QGGWILRSHVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDD 180
                    VAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDD
Sbjct: 121 ---------VAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDD 148

Query: 181 PLVPEIAHMYKTDRAKYEASARSWTQKYAMG 212
           PLVPEIAHMYKTDRAKYEA+AR+WTQKYAMG
Sbjct: 181 PLVPEIAHMYKTDRAKYEATARNWTQKYAMG 148

[Close]

BLAST of Carg12644 vs. TAIR 10
Match: AT5G41700.1 (ubiquitin conjugating enzyme 8 )

HSP 1 Score: 277.3 bits (708), Expect = 1.0e-74
Identity = 143/211 (67.77%), Postives = 147/211 (69.67%), Query Frame = 0


Query: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVNIHFPPDY 60
           MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP++SPYSGGVFLV IHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPDY 60

Query: 61  PFKPPKAVTNGFRDRHCRCASEDAGPQGGRFQTPGGLPERRLNLKGGWTPSDVPARTLDA 120
           PFKPPK                                                      
Sbjct: 61  PFKPPK------------------------------------------------------ 120

Query: 121 QGGWILRSHVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDD 180
                    VAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDD
Sbjct: 121 ---------VAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDD 148

Query: 181 PLVPEIAHMYKTDRAKYEASARSWTQKYAMG 212
           PLVPEIAHMYKTDRAKYEA+AR+WTQKYAMG
Sbjct: 181 PLVPEIAHMYKTDRAKYEATARNWTQKYAMG 148

[Close]

BLAST of Carg12644 vs. TAIR 10
Match: AT5G41700.5 (ubiquitin conjugating enzyme 8 )

HSP 1 Score: 277.3 bits (708), Expect = 1.0e-74
Identity = 143/211 (67.77%), Postives = 147/211 (69.67%), Query Frame = 0


Query: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVNIHFPPDY 60
           MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP++SPYSGGVFLV IHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPDY 60

Query: 61  PFKPPKAVTNGFRDRHCRCASEDAGPQGGRFQTPGGLPERRLNLKGGWTPSDVPARTLDA 120
           PFKPPK                                                      
Sbjct: 61  PFKPPK------------------------------------------------------ 120

Query: 121 QGGWILRSHVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDD 180
                    VAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDD
Sbjct: 121 ---------VAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDD 148

Query: 181 PLVPEIAHMYKTDRAKYEASARSWTQKYAMG 212
           PLVPEIAHMYKTDRAKYEA+AR+WTQKYAMG
Sbjct: 181 PLVPEIAHMYKTDRAKYEATARNWTQKYAMG 148

The following BLAST results are available for this feature:

BLAST of Carg12644 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7027526.1	5.4e-123	100.00	Ubiquitin-conjugating enzyme E2 11, partial [Cucurbita argyrosperma subsp. argyr...	[more]
BBG97621.1	5.0e-76	71.50	ubiquitin-conjugating enzyme 28, partial [Prunus dulcis]	[more]
KAF9671181.1	1.1e-75	70.42	hypothetical protein SADUNF_Sadunf12G0020700 [Salix dunnii]	[more]
RYR79414.1	3.2e-75	65.18	hypothetical protein Ahy_A01g004226 isoform A [Arachis hypogaea]	[more]
KHN24724.1	5.5e-75	69.67	Ubiquitin-conjugating enzyme E2-17 kDa [Glycine soja]	[more]

BLAST of Carg12644 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94F47	2.8e-74	68.25	Ubiquitin-conjugating enzyme E2 28 OS=Arabidopsis thaliana OX=3702 GN=UBC28 PE=1...	[more]
P35135	1.1e-73	67.77	Ubiquitin-conjugating enzyme E2-17 kDa OS=Solanum lycopersicum OX=4081 PE=2 SV=1	[more]
P35131	1.4e-73	67.77	Ubiquitin-conjugating enzyme E2 8 OS=Arabidopsis thaliana OX=3702 GN=UBC8 PE=1 S...	[more]
P35132	5.4e-73	67.30	SUMO-conjugating enzyme UBC9 OS=Arabidopsis thaliana OX=3702 GN=UBC9 PE=1 SV=1	[more]
Q8S919	9.1e-73	66.82	Ubiquitin-conjugating enzyme E2 5B OS=Oryza sativa subsp. japonica OX=39947 GN=U...	[more]

BLAST of Carg12644 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A4Y1R0J2	2.4e-76	71.50	Ubiquitin-conjugating enzyme 28 (Fragment) OS=Prunus dulcis OX=3755 GN=Prudu_006...	[more]
A0A445EV81	1.6e-75	65.18	UBC core domain-containing protein OS=Arachis hypogaea OX=3818 GN=Ahy_A01g004226...	[more]
A0A7N2R3E1	1.6e-75	70.62	UBC core domain-containing protein OS=Quercus lobata OX=97700 PE=3 SV=1	[more]
A0A0B2QXH0	2.7e-75	69.67	Ubiquitin-conjugating enzyme E2-17 kDa OS=Glycine soja OX=3848 GN=glysoja_029793...	[more]
A0A5N5P2T1	7.8e-75	71.09	UBC core domain-containing protein OS=Salix brachista OX=2182728 GN=DKX38_000691...	[more]

BLAST of Carg12644 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G64230.1	2.0e-75	68.25	ubiquitin-conjugating enzyme 28	[more]
AT1G64230.2	2.0e-75	68.25	ubiquitin-conjugating enzyme 28	[more]
AT5G41700.2	1.0e-74	67.77	ubiquitin conjugating enzyme 8	[more]
AT5G41700.1	1.0e-74	67.77	ubiquitin conjugating enzyme 8	[more]
AT5G41700.5	1.0e-74	67.77	ubiquitin conjugating enzyme 8	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SMART	SM00212	ubc_7	coord: 4..210 e-value: 1.7E-67 score: 240.2
None	No IPR available	PANTHER	PTHR24068:SF346	BNAA01G32320D PROTEIN	coord: 3..67
None	No IPR available	PANTHER	PTHR24068	UBIQUITIN-CONJUGATING ENZYME E2	coord: 3..67
None	No IPR available	PANTHER	PTHR24068:SF346	BNAA01G32320D PROTEIN	coord: 129..208
None	No IPR available	PANTHER	PTHR24068	UBIQUITIN-CONJUGATING ENZYME E2	coord: 129..208
IPR000608	Ubiquitin-conjugating enzyme E2	PFAM	PF00179	UQ_con	coord: 130..204 e-value: 1.3E-26 score: 92.9 coord: 5..67 e-value: 1.1E-18 score: 67.3
IPR000608	Ubiquitin-conjugating enzyme E2	PROSITE	PS50127	UBC_2	coord: 1..210 score: 48.902359
IPR000608	Ubiquitin-conjugating enzyme E2	CDD	cd00195	UBCc	coord: 3..205 e-value: 8.14375E-65 score: 195.114
IPR016135	Ubiquitin-conjugating enzyme/RWD-like	GENE3D	3.10.110.10	Ubiquitin Conjugating Enzyme	coord: 1..211 e-value: 1.1E-70 score: 238.3
IPR016135	Ubiquitin-conjugating enzyme/RWD-like	SUPERFAMILY	54495	UBC-like	coord: 1..68
IPR016135	Ubiquitin-conjugating enzyme/RWD-like	SUPERFAMILY	54495	UBC-like	coord: 130..210
IPR023313	Ubiquitin-conjugating enzyme, active site	PROSITE	PS00183	UBC_1	coord: 137..152

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg12644-RA	Carg12644-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000209	protein polyubiquitination
biological_process	GO:0006511	ubiquitin-dependent protein catabolic process
cellular_component	GO:0016020	membrane
cellular_component	GO:0005634	nucleus
molecular_function	GO:0000166	nucleotide binding
molecular_function	GO:0061631	ubiquitin conjugating enzyme activity