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Carg12641 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ACCTGAAGAAGAAGATGGACCAGGGGATTCTGTGGAGAGCAGACGATTACGAGGGCACAACTGAACCTTCTTCTACAACGAATCGCCTCACCTTCATTGCTGCTCCGGCGATTTCTCTGAGGTTCCGATTTGGATTGGAGCTCTCAAAGCTACCCACAACAGTGGACTAATTCCGCTCAGTGATCGTCATCTAGAAATGATGTCTCAGAAACTCATCGCCGCTTCTTCTCCGTAAGTAACCTTAATTGCACAGCCTCCATTTTGATCTATCTTCACTTTCATGCAAGTTCGTTCAAATTTGACTTCTCTGGTTTCCAATTGAGTTGTTCTCTTCGTAGCACGAGTTGAATTTGATTGTGCATGTACCTTAATTTCGTCGCTTAGTTGTATGATTCGTTCGGCTACGTTTTTTTTTTGTTGAAATGATGCAGAAGCCAAGTTGTTCTGTTGGATTGTAACTCTAAAGGATCGGACTCGTTGCTGGTTCCTCGCAATCTGAACTACGGGTTCACTAGAGGTATCCTCGCTATATCAGCCATTTTTTGTTTTAAGCTGCTGTTTATGTTAAAGATTGGCTGTTAGTTGAATGAATCTCTGTTACAACTTTCTCTCGTGTCTTTAGTGGTTGAAGGAATCGCCATTGTTGCTGAACTTGGCCAATTTATGGATTTTGATTCACTTTTTTATCCAACTTAAGTGTCACCCTGTTTTTGCTCCTTTTTTTAGGATATTGAATGTTTAAAATGAAAATTTGAAGCATTAGTTTCAGTCGTACGTTTCTTGGAAACTCGTTCTTAATTTCTTTCCCTCTGTATGCTAATTTTGCGTGTTTATCGTTTTGCAGTGAGCAAAAAGCTGAAGGTATGTCGACACCGAGCTAGTTTTTGGGACAATATCAAATCCGGGTAATTCGAGATATGGCTATTCTGGTGACTTTTTTTGCACACACTGCAATTTTATTGTAAGCATGCTTTGACAGATTTCTAGCTAACACAATTTTGATTGCTGTTTTAGTATGTTGCCCTTCTATGTTAGATATTAGATATAGCTAAATTTTCAAATTTATAACCAGGAACCGCCCCTGACGTTTTGACCATCTGTAAATATTGGGGTTCGATAATCATTTTGGGAAATCGTAAGAATCCATATGTACAATATGCTGCTTTTACCAATATTAGCTTTTTTTTGGGTAAGAAACAGAAAAGAGTTGGTGGTAATCATACCCGCTATTTTGATCGACATGTATTCTATTCTGATAAGCTAAACAAAAATTCGAAATATAACAGTGAAACACTTCTTTAATTGGGAACCTCTGGGGAGGACACTATCAGAGAAGTTATGCTATGTAAATAAGAACCATGAAAACGTCAACAAGAAAACAAGTAGACACCGGAGAACTTAAAATCATTTACCATTCTCCCTTGAAGGATCCTTGTAGAAGGTTTCTCATGTGAGGGTTGTTTAGTGAAGATAAGAGGTATTTGCAGTAGATGTGAAGAAATCATGTAAAGTCATGCTGGTTTATTAACCTTTAAGCAAATAAAATTTTTAAATATTTGAGTGTGATTATGGGGTTCTCTCCTCTAAATTTGAATTCCATTGAACTTCTTGGTGGGAATCATTTACATCCTACTGACAAGCATGATCCACAAGTTTCTACTCTTTTTTACAAAGGAATTTCTGCTTCTTGTTGCAGGTTCTTGAATAATAATACTACCCAAGTGGTCGAACCTCCTTCCACGCTTCAGGAAGAGGAAGAAGAACCCTTGCCTGAGGAGTTTGTTCTCACTGAAACGACATTACCGGATGGAACAATTGAACAAATAATATTCTCTACGGGTGGAGATGTTGATATATATGATCTTCAAGCCCTTTGTGATAAGGTTTAGTCATTCAGGTTTTTGTACCTTTTGAGAAATATTAGTTTTGTATACCATGAGCTCAGGGTCTAGAATTGTGTTTGGTTTAGTTAATTTGTACGTTTTATGTATAAAAAAGTATGTGCTACTTCATCCATCCTCTCTGGCCCGATGTTATTGCAAATTTGTGATGCACATTATTACGATTTACCAATCCATGTGTTAGTAATATATTTTTGTTGACAGGTAGGTTGGCCACGTAGATCACTAAACAAATTAGATGTAGCCCTTAGAAACAGTTATATGGTAGCTGCACTACATTCAACTCGGAAATCTCCTGTTTCAGGTATTTTGTGCTGATTTTTCATTCACTTGCCCTACTTCTTCTACGTCTGAAAATATTATGAACAACTTATTGTATTTTGAGAAGTTATTTGACAGAGGAGAATGCACCAAAGAAGCTCATTGGTATGGCTCGTGCCACATCAGACCATGCGTTCAACGCTACAATTTGGGATGTTCTTGTGGATCCTTCTTATCAGGTTATCATTTTCTACTGTGAAAACTTTATGAAATTATATGTATTGTATTGTGGATTTGCAATCTATGGTATCATACCCACATTATGAATTGGCAATATATGTATTGTTTTGTGGTTCAGGGTCAAGGCCTAGGCAGGGCCCTTGTTGAAAAGCTTATAAGGGCACTTTTGCAAAGGGATATTGGCAATATAGCACTCTTTGCAGATAGCCAAGGTATAGTAGCCCTCTTTAGTGCTTCCCTAGGAAATAATTACTGTAACCTTTCTTCGCAGCTTAGTTAAAGCATCTATCTTCCAAGAACGACATCGATTGGAGAGAAACGAGTGTCAGCGAGTACGCTGGGCCCCGAAGAGGGGTGGATTATGAGATCCCACATCGGTTTGGGAAAAGAACGAAACATTCTTTATAAGGGTGTTGAAACTTTTCCCTAGCAGACGTTTGTTAAAAACTTTGAGGGGAAACTCCAAAGAGGAAAATATCTTCTAGTGGTGTGCTTAACTTGCGTGGTTTTCAGAATATTAGATCAAATAAAATATGGGGCGAAGAAATTGGTTACTACAACTTCTTGGATGAAGTATAGATGCTTTAACTGCCAGCTTAATTCATGTTGGCTACTATCATAGATCTTGATGCTCTACATCTATTTTCTTTATCGGTTTCGGATTTCCTCCCAACCCTACATCACAATCGTAGGACAACGAACTTACTTCGACTCCAATTTTATCTTATGGAATAACTTAGATTGGATTTGGATTCAGCTAAAAGTCTAAAACAATGTGATTGTTGCAGTGGTAGAGTTTTACCAGAATCTAGGCTTCGAACCCGACCCCGAAGGAATTAAAGGCATGTTTTGGTACCCGAAACATCATAATTAG ACCTGAAGAAGAAGATGGACCAGGGGATTCTGTGGAGAGCAGACGATTACGAGGGCACAACTGAACCTTCTTCTACAACGAATCGCCTCACCTTCATTGCTGCTCCGGCGATTTCTCTGAGGTTCCGATTTGGATTGGAGCTCTCAAAGCTACCCACAACAGTGGACTAATTCCGCTCAGTGATCGTCATCTAGAAATGATGTCTCAGAAACTCATCGCCGCTTCTTCTCCAAGCCAAGTTGTTCTGTTGGATTGTAACTCTAAAGGATCGGACTCGTTGCTGGTTCCTCGCAATCTGAACTACGGGTTCACTAGAGTGAGCAAAAAGCTGAAGGTATGTCGACACCGAGCTAGTTTTTGGGACAATATCAAATCCGGGTTCTTGAATAATAATACTACCCAAGTGGTCGAACCTCCTTCCACGCTTCAGGAAGAGGAAGAAGAACCCTTGCCTGAGGAGTTTGTTCTCACTGAAACGACATTACCGGATGGAACAATTGAACAAATAATATTCTCTACGGGTGGAGATGTTGATATATATGATCTTCAAGCCCTTTGTGATAAGGTAGGTTGGCCACGTAGATCACTAAACAAATTAGATGTAGCCCTTAGAAACAGTTATATGGTAGCTGCACTACATTCAACTCGGAAATCTCCTGTTTCAGAGGAGAATGCACCAAAGAAGCTCATTGGTATGGCTCGTGCCACATCAGACCATGCGTTCAACGCTACAATTTGGGATGTTCTTGTGGATCCTTCTTATCAGGGTCAAGGCCTAGGCAGGGCCCTTGTTGAAAAGCTTATAAGGGCACTTTTGCAAAGGGATATTGGCAATATAGCACTCTTTGCAGATAGCCAAGTGGTAGAGTTTTACCAGAATCTAGGCTTCGAACCCGACCCCGAAGGAATTAAAGGCATGTTTTGGTACCCGAAACATCATAATTAG ATGATGTCTCAGAAACTCATCGCCGCTTCTTCTCCAAGCCAAGTTGTTCTGTTGGATTGTAACTCTAAAGGATCGGACTCGTTGCTGGTTCCTCGCAATCTGAACTACGGGTTCACTAGAGTGAGCAAAAAGCTGAAGGTATGTCGACACCGAGCTAGTTTTTGGGACAATATCAAATCCGGGTTCTTGAATAATAATACTACCCAAGTGGTCGAACCTCCTTCCACGCTTCAGGAAGAGGAAGAAGAACCCTTGCCTGAGGAGTTTGTTCTCACTGAAACGACATTACCGGATGGAACAATTGAACAAATAATATTCTCTACGGGTGGAGATGTTGATATATATGATCTTCAAGCCCTTTGTGATAAGGTAGGTTGGCCACGTAGATCACTAAACAAATTAGATGTAGCCCTTAGAAACAGTTATATGGTAGCTGCACTACATTCAACTCGGAAATCTCCTGTTTCAGAGGAGAATGCACCAAAGAAGCTCATTGGTATGGCTCGTGCCACATCAGACCATGCGTTCAACGCTACAATTTGGGATGTTCTTGTGGATCCTTCTTATCAGGGTCAAGGCCTAGGCAGGGCCCTTGTTGAAAAGCTTATAAGGGCACTTTTGCAAAGGGATATTGGCAATATAGCACTCTTTGCAGATAGCCAAGTGGTAGAGTTTTACCAGAATCTAGGCTTCGAACCCGACCCCGAAGGAATTAAAGGCATGTTTTGGTACCCGAAACATCATAATTAG MMSQKLIAASSPSQVVLLDCNSKGSDSLLVPRNLNYGFTRVSKKLKVCRHRASFWDNIKSGFLNNNTTQVVEPPSTLQEEEEEPLPEEFVLTETTLPDGTIEQIIFSTGGDVDIYDLQALCDKVGWPRRSLNKLDVALRNSYMVAALHSTRKSPVSEENAPKKLIGMARATSDHAFNATIWDVLVDPSYQGQGLGRALVEKLIRALLQRDIGNIALFADSQVVEFYQNLGFEPDPEGIKGMFWYPKHHN Homology
BLAST of Carg12641 vs. NCBI nr
Match: KAG7027523.1 (Acetyltransferase NSI [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 503.8 bits (1296), Expect = 8.3e-139 Identity = 249/249 (100.00%), Postives = 249/249 (100.00%), Query Frame = 0
BLAST of Carg12641 vs. NCBI nr
Match: KAG6595542.1 (putative acetyltransferase TAP2, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 501.9 bits (1291), Expect = 3.2e-138 Identity = 248/249 (99.60%), Postives = 248/249 (99.60%), Query Frame = 0
BLAST of Carg12641 vs. NCBI nr
Match: XP_022924947.1 (acetyltransferase NSI-like isoform X1 [Cucurbita moschata]) HSP 1 Score: 498.8 bits (1283), Expect = 2.7e-137 Identity = 246/249 (98.80%), Postives = 247/249 (99.20%), Query Frame = 0
BLAST of Carg12641 vs. NCBI nr
Match: KAG6595633.1 (putative acetyltransferase TAP2, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 496.5 bits (1277), Expect = 1.3e-136 Identity = 245/249 (98.39%), Postives = 246/249 (98.80%), Query Frame = 0
BLAST of Carg12641 vs. NCBI nr
Match: XP_023517232.1 (acetyltransferase NSI-like [Cucurbita pepo subsp. pepo] >XP_023517233.1 acetyltransferase NSI-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 480.3 bits (1235), Expect = 9.9e-132 Identity = 237/249 (95.18%), Postives = 241/249 (96.79%), Query Frame = 0
BLAST of Carg12641 vs. ExPASy Swiss-Prot
Match: A0A0R0IHP4 (Probable acetyltransferase TAP2 OS=Glycine max OX=3847 GN=TAP2 PE=1 SV=2) HSP 1 Score: 335.5 bits (859), Expect = 5.1e-91 Identity = 174/250 (69.60%), Postives = 199/250 (79.60%), Query Frame = 0
BLAST of Carg12641 vs. ExPASy Swiss-Prot
Match: K7MTW9 (Histone acetyltransferase TAP1 OS=Glycine max OX=3847 GN=TAP1 PE=1 SV=1) HSP 1 Score: 318.5 bits (815), Expect = 6.5e-86 Identity = 154/206 (74.76%), Postives = 176/206 (85.44%), Query Frame = 0
BLAST of Carg12641 vs. ExPASy Swiss-Prot
Match: Q7X9V3 (Acetyltransferase NSI OS=Arabidopsis thaliana OX=3702 GN=NSI PE=1 SV=1) HSP 1 Score: 308.9 bits (790), Expect = 5.2e-83 Identity = 161/253 (63.64%), Postives = 189/253 (74.70%), Query Frame = 0
BLAST of Carg12641 vs. ExPASy Swiss-Prot
Match: A2Y5T7 (Serotonin N-acetyltransferase 1, chloroplastic OS=Oryza sativa subsp. indica OX=39946 GN=SNAT1 PE=3 SV=3) HSP 1 Score: 286.2 bits (731), Expect = 3.6e-76 Identity = 147/243 (60.49%), Postives = 177/243 (72.84%), Query Frame = 0
BLAST of Carg12641 vs. ExPASy Swiss-Prot
Match: Q5KQI6 (Serotonin N-acetyltransferase 1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=SNAT1 PE=1 SV=1) HSP 1 Score: 286.2 bits (731), Expect = 3.6e-76 Identity = 147/243 (60.49%), Postives = 177/243 (72.84%), Query Frame = 0
BLAST of Carg12641 vs. ExPASy TrEMBL
Match: A0A6J1EAF9 (acetyltransferase NSI-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111432339 PE=4 SV=1) HSP 1 Score: 498.8 bits (1283), Expect = 1.3e-137 Identity = 246/249 (98.80%), Postives = 247/249 (99.20%), Query Frame = 0
BLAST of Carg12641 vs. ExPASy TrEMBL
Match: A0A6J1DZR2 (acetyltransferase NSI OS=Momordica charantia OX=3673 GN=LOC111025811 PE=4 SV=1) HSP 1 Score: 453.0 bits (1164), Expect = 8.2e-124 Identity = 223/246 (90.65%), Postives = 233/246 (94.72%), Query Frame = 0
BLAST of Carg12641 vs. ExPASy TrEMBL
Match: A0A6J1IM80 (acetyltransferase NSI-like OS=Cucurbita maxima OX=3661 GN=LOC111478297 PE=4 SV=1) HSP 1 Score: 445.7 bits (1145), Expect = 1.3e-121 Identity = 219/247 (88.66%), Postives = 234/247 (94.74%), Query Frame = 0
BLAST of Carg12641 vs. ExPASy TrEMBL
Match: A0A6J1GDB9 (acetyltransferase NSI-like OS=Cucurbita moschata OX=3662 GN=LOC111452951 PE=4 SV=1) HSP 1 Score: 445.3 bits (1144), Expect = 1.7e-121 Identity = 219/247 (88.66%), Postives = 233/247 (94.33%), Query Frame = 0
BLAST of Carg12641 vs. ExPASy TrEMBL
Match: A0A0A0L2Y1 (N-acetyltransferase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G336250 PE=4 SV=1) HSP 1 Score: 439.5 bits (1129), Expect = 9.3e-120 Identity = 219/248 (88.31%), Postives = 228/248 (91.94%), Query Frame = 0
BLAST of Carg12641 vs. TAIR 10
Match: AT1G32070.1 (nuclear shuttle interacting ) HSP 1 Score: 309.3 bits (791), Expect = 2.8e-84 Identity = 165/255 (64.71%), Postives = 190/255 (74.51%), Query Frame = 0
BLAST of Carg12641 vs. TAIR 10
Match: AT1G32070.3 (nuclear shuttle interacting ) HSP 1 Score: 309.3 bits (791), Expect = 2.8e-84 Identity = 161/252 (63.89%), Postives = 189/252 (75.00%), Query Frame = 0
BLAST of Carg12641 vs. TAIR 10
Match: AT1G32070.2 (nuclear shuttle interacting ) HSP 1 Score: 308.9 bits (790), Expect = 3.7e-84 Identity = 161/253 (63.64%), Postives = 189/253 (74.70%), Query Frame = 0
BLAST of Carg12641 vs. TAIR 10
Match: AT1G26220.1 (Acyl-CoA N-acyltransferases (NAT) superfamily protein ) HSP 1 Score: 107.8 bits (268), Expect = 1.2e-23 Identity = 56/138 (40.58%), Postives = 87/138 (63.04%), Query Frame = 0
BLAST of Carg12641 vs. TAIR 10
Match: AT4G19985.1 (Acyl-CoA N-acyltransferases (NAT) superfamily protein ) HSP 1 Score: 58.5 bits (140), Expect = 8.6e-09 Identity = 31/90 (34.44%), Postives = 49/90 (54.44%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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