Carg12632 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg12632
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	E3 ubiquitin-protein ligase Praja-2
Location	Carg_Chr07: 6989163 .. 6993658 (-)
RNA-Seq Expression	Carg12632
Synteny	Carg12632

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATTCGATCAAAGCATGAACACCCAGATACAGAATTCAATCCATCACTATCCGAATTTTGTTTAGCCTTTTTCTTTGAGAACAATGTTGATGGGTCAATTACGCCGCTCGCTTTTAAGCGCGTTTTGATTCGTTGAATGTTCTTCGTTTTCCATCCAACAATGGCGGCCGCTCCCGCAAATCGTTTTCTCTAAGAACCCCATTGGCCTCCTCCGCCTGATAATCACGTTGGTTTTCGTTTTTTCTCGCCGATTTCTGTTCATCTTAGTATCATAACGTTTTCACGATTCAAAATGAATGTTTCTGAACAGCGATATTCAATTATTTGTTTCTCAATCGTTTAGCCCTTTTCGTTGATTGTATTATGTTCTTCGTCTTACACAAGTTTTCAGATCGTTGTCTTCGATTGGATGAGTTGGAGCCGAATGTTGGAGGTTTGAATCACTGGAAGCGAACTTTGATCTTCGTCTGTTTCGTTTTATTATGCAGTTTTTCGTTTTCCCTAATTGTATGTAATGTCATTTTTGTGCTCTCTGTGCTAATCATTGGGTGATTGATCTGTTTTCTTCTGTTGCGATTGCGTTGAAATTGAAAACCCTTAGTTTGGACGAAATTATTTCCCTTTTTGTCTTGTTTGCTGATTGAACTTCTGGAACCACTCTTGAACCCTTCAAATACATGTTAGTGGGATGGAGTTTGTGTTGTTGGAGGGTTTTAGCATCAAAATTGGGGATGGATGTGTGAGATCCCGCATCGGTTGGGGAGGAGAACAAAACATTCTTCATAAGGGTGTGGAAACCTCTCCCTAGCAGACGCGTTTTAAAAACTTTGAGGGGGGAAGCCTAGAAGGGGAAGCCTAGAAGGGAAAGCCTAAAGAGGACAATATGTGCTAGTGGTGTGCTTGGCTGCTACAGGACCTTGACGCGTTTGAGAATATTGTTCCCTCGGTTCTACTTTTGAAGTTCTAGGAGTTTGAACTCCTGGTGGGGCGATGGAGGGAGGTTGGAAAGGGCAGTTCATTTGGATTGAGATAAGAAAATGGTTTAGTTTGAAACAAAGAAGTGAAGTGAGGTTAGGAATGAAGTGGTAAAGGAGATATCTAATTCTGCTTATGTGATGTTCTTCTCTCTTTTAAATCTCCTCTCAACTAGGGGTTGTGAAGGGTTACGAGTAGTTGTTAATGTACAAGAGGAAACACGGACGAGGAGTGGCTCGTGACAGGTTTCATGGTGAATGAAGCGGTATCAATTGAGAATGAGAGTAAGTTTGAGATAGTACAAATATAAAACAACTTAGTTAAGAGCTTGAATACATGGCTACAAGGCTAGAAAACTATGACAATTCAGTGTGGTCGGTCTCTCAAGTCGTTTGATCATCTCTGTATAACTGGCATTGTTTTTCATATTTGATTGTGTTGAGGATTGTTCGGAGGGAGTCCCACATTGAATAATTTAGAGGATGATCATGGGTTTATAAGTAAAGAATAAATCTCCATTTGTATGAGGCCTTTTGGGGACACCCAAAGAAAAACCGTGAGAGCTTATGCTCAAAGTGGATAATATCATACCATTGTGGAGGTCCGGAGGTCCGTGATTCCTAACAGACTGAACTTCAACTTAGTTAAATATGATTCTTATTTCACTACTTGTTGAACTTCATGTTGGTTTTCCACTGTTTGTGATTTTTGCTTGCTGGTCTCGTCTCAGATGGACATCGACTTACAAAGAATCTTGGAGGAGTTTCTTCAATCCACTGCTCATGTGATGGACAATAATGAACTGGTTGATGAACATGGTCTAAATCAATCGCCAACTTGTGCATGTTGCGAACGATTCCTAGTACTTGATAACGATGTCAGTGGTGAACCTGAAGCCATTGGTATATGTGGCGATTGTAAGTTTTTGTTACTTGAAGATATGGAATTCCGTGAACAGGATTCTTATAATAGGGCGCTGCCAAGAGGAAGAAGAACAAGGCATGGTAGTTCAGAGTCTCCTGAAAGTCGTTTTTCGCAGGAATTCTCCCATATGATTAACTTGGTGAGGCAAAGTCAGTCGAGTATCTCTAGCTACGGGGATCGGTATGCAGATGGTTCTAATGCTACTTATGCTACGCAGGACTCGAGTTTGCTTATGAGCCCCAATCAATCTAGAAGATGGCGTCGAGCAAACTCTGATTCTGAAAATGATGGTTTAGATAGTATTGACTCTATGTTTCGAGAGAGTGGATCAAATTTCAGTTTTGGGTCTTACAGACATTCTTATGGTGATATTGATTTTGTTTCGTACGGTACTTATGGGGGTGACTCGGACGCTTCCATGGATGGACGAAGTTCCTTGGACACAGATGTTTTCGTTTTTCCTGGTGATGGATTCAATGATACCGATATAGACATTGATCCTATGCGTGCTGGTGTCGGCGATTGGGACTCGAGTGATGAGGAGGAGGATCTTGGTGAATTAACAGAAGCTGACACAGAGCAAGATGCACTCGAAGTAGAATCTTCTCAATCTAGGCCTCCACTTCAAGATTTTCAAGTTTCTAGTTCTTCTGGGAGAGTTAACTCTGGTAATTGGAATGAACAACTTTCTTCACCAGAATACGAACTCGGGCGAATCAGGAGGAATGGGCGATTTTATTCGAACATGAACTATTCACAGTCGGAATTACTATCTTTCGTTGAGAATTTTGGTGAATATCTTGACCAACAAGGCTTTGAACAACTTCTTGAGCAAATTGCCATGACGACCAGCTCAAGACGCGGAGCACCTCCTGCAGCTGTCTCTTCAGTGAAAAATCTCCCACTTTTGGTGATTTCTAAAGAACATTTGAAACATGACAATATATCCTGTGCAATTTGTAAGGATTTCTTACTCGTGGGCGTCGAAGTGAATCAACTACCTTGCCTTCATCTCTACCACCCTTCCTGCATCATGCCGTGGTTGCGTACACGGAATTCGTGCCCCCTTTGTCGATATGAACTTCCAACCGACGATCGAGATTACGAAGAGGGAAAGCGAAGTAGCATCATTACAGCAGAGGTCCAAGGAGTTGGAGCAAATCTAGAGTTTAGAACCAGCCAAGGAGAGGAGCTGAACAACATAGACTCTGCAGTTAATAACAGTAACAATTCAGGCAGACACGACGGTATAAGAAGTTGGGTGTTCGTGGCTGCTCCGATCGTTGGTCTTGCAGGTATAGCCCTGATGTTATGGTTTGGTAGCCCTCGGTGTGATCAAAGAGTACCCGTAGGCCAAGTTGCAGACAGAAGGCAACTTGATGCTCACATTGCTGATGCATTGAACCAAAGAGAGAACAGAAGCAGGAGATGGTGGTGAATTGTCTAGCAATAGCGTATGGTACAAGAAATCAAATTAACACGAGCTTTCTTTTACTTCAATGATAATGCTTATATGAAGTTCATACACAATTGTTTATATCAAAATGTTCTTCACATGAATGGGCATTTAGGTATCCAAATGTTTATCTCCACATGAATATTCTGCAGCGTTCGAGTATCCTTGGAGCGGCGAACGAAGGTGGTTTTCTTCAGCATTTAGTCTATTGTTTTCGGCCAATATCCGATGGAGAAGGTAAAATCAAATTTCCAAACCTTGAAGTTTATACGAGTTTATTTCCGAAGTTCAATATATTCGAGGATATTATGATTTTAGTCATGTACTGTCCTGTTCTTTTGTCTGTTTCGACGTTGGTTTGTTTTGTTTATGAGAGTTGGTTTTCCATTTTTACATTTATGTTCTGTTCCATGATGTTTGAAGTCCCTAAGACTACTCTGTTTTGGTTTATTCTAAGAAGCTTGTTAACTTTGTCGTGATTTAGATTTAGACCAATACTAAGGTTAGCATGTTGTCTGCTCAACAATTCTCAACGTAACTCAACGTAAGCACAAGGTTTAGTTTGGACGAGAACTTCGATTGATGTATCGATTGTGATAAGTTTAGTTGAAATTTCAAATGCATCGATTGATGTAAATGAGCAAGGGCTTGGAGGCATGTATTGTGTCGTATTGTTCGGATGCGACCGATAAATTGCTATGAAGTATCATAACAAATTTCTCTCTTTATATTGCACACATCATTTGTTGTATTTGCTACCATGCTTTATGTTTTTGGGCAAGACAATACAGAGCTGTCCTTAGCTGCGACAAAGTAATTGTATCCATCCCTTGTTTTAGTTCCAATTTTTATGTAAGTTGCTTTGAATAACCTTTTTAGACTTATCAAGATTTGTTAGTTAGTCGCTTGTTTGATGGCAGGAATCATCGATTACATAATTGGGATTTGGCGTTCTACTTTGGTTGGAAAATCCGAAAAGCTCAATTTTTTTGTCAAGTTATTTCTTGTAGTCAAGTAGTCTAGTCAAGTCAATATAAGTATCGATTGAACTATTTTGTATGAGTTTTGATCATTCAATAACTATGAATTTTGATTGTGTTTGATAAATTTTGAATATAAATATCTTGCTAGATATCAGATA

mRNA sequence

AATTCGATCAAAGCATGAACACCCAGATACAGAATTCAATCCATCACTATCCGAATTTTGTTTAGCCTTTTTCTTTGAGAACAATGTTGATGGGTCAATTACGCCGCTCGCTTTTAAGCGCGTTTTGATTCGTTGAATGTTCTTCGTTTTCCATCCAACAATGGCGGCCGCTCCCGCAAATCGTTTTCTCTAAGAACCCCATTGGCCTCCTCCGCCTGATAATCACGTTGGTTTTCGTTTTTTCTCGCCGATTTCTGTTCATCTTAGTATCATAACGTTTTCACGATTCAAAATGAATGTTTCTGAACAGCGATATTCAATTATTTGTTTCTCAATCGTTTAGCCCTTTTCGTTGATTGTATTATGTTCTTCGTCTTACACAAGTTTTCAGATCGTTGTCTTCGATTGGATGAGTTGGAGCCGAATGTTGGAGATGGACATCGACTTACAAAGAATCTTGGAGGAGTTTCTTCAATCCACTGCTCATGTGATGGACAATAATGAACTGGTTGATGAACATGGTCTAAATCAATCGCCAACTTGTGCATGTTGCGAACGATTCCTAGTACTTGATAACGATGTCAGTGGTGAACCTGAAGCCATTGGTATATGTGGCGATTGTAAGTTTTTGTTACTTGAAGATATGGAATTCCGTGAACAGGATTCTTATAATAGGGCGCTGCCAAGAGGAAGAAGAACAAGGCATGGTAGTTCAGAGTCTCCTGAAAGTCGTTTTTCGCAGGAATTCTCCCATATGATTAACTTGGTGAGGCAAAGTCAGTCGAGTATCTCTAGCTACGGGGATCGGTATGCAGATGGTTCTAATGCTACTTATGCTACGCAGGACTCGAGTTTGCTTATGAGCCCCAATCAATCTAGAAGATGGCGTCGAGCAAACTCTGATTCTGAAAATGATGGTTTAGATAGTATTGACTCTATGTTTCGAGAGAGTGGATCAAATTTCAGTTTTGGGTCTTACAGACATTCTTATGGTGATATTGATTTTGTTTCGTACGGTACTTATGGGGGTGACTCGGACGCTTCCATGGATGGACGAAGTTCCTTGGACACAGATGTTTTCGTTTTTCCTGGTGATGGATTCAATGATACCGATATAGACATTGATCCTATGCGTGCTGGTGTCGGCGATTGGGACTCGAGTGATGAGGAGGAGGATCTTGGTGAATTAACAGAAGCTGACACAGAGCAAGATGCACTCGAAGTAGAATCTTCTCAATCTAGGCCTCCACTTCAAGATTTTCAAGTTTCTAGTTCTTCTGGGAGAGTTAACTCTGGTAATTGGAATGAACAACTTTCTTCACCAGAATACGAACTCGGGCGAATCAGGAGGAATGGGCGATTTTATTCGAACATGAACTATTCACAGTCGGAATTACTATCTTTCGTTGAGAATTTTGGTGAATATCTTGACCAACAAGGCTTTGAACAACTTCTTGAGCAAATTGCCATGACGACCAGCTCAAGACGCGGAGCACCTCCTGCAGCTGTCTCTTCAGTGAAAAATCTCCCACTTTTGGTGATTTCTAAAGAACATTTGAAACATGACAATATATCCTGTGCAATTTGTAAGGATTTCTTACTCGTGGGCGTCGAAGTGAATCAACTACCTTGCCTTCATCTCTACCACCCTTCCTGCATCATGCCGTGGTTGCGTACACGGAATTCGTGCCCCCTTTGTCGATATGAACTTCCAACCGACGATCGAGATTACGAAGAGGGAAAGCGAAGTAGCATCATTACAGCAGAGGTCCAAGGAGTTGGAGCAAATCTAGAGTTTAGAACCAGCCAAGGAGAGGAGCTGAACAACATAGACTCTGCAGTTAATAACAGTAACAATTCAGGCAGACACGACGGTATAAGAAGTTGGGTGTTCGTGGCTGCTCCGATCGTTGGTCTTGCAGGTATAGCCCTGATGTTATGGTTTGGTAGCCCTCGGTGTGATCAAAGAGTACCCGTAGGCCAAGTTGCAGACAGAAGGCAACTTGATGCTCACATTGCTGATGCATTGAACCAAAGAGAGAACAGAAGCAGGAGATGGTGGTGAATTGTCTAGCAATAGCGTATGCGTTCGAGTATCCTTGGAGCGGCGAACGAAGGTGGTTTTCTTCAGCATTTAGTCTATTGTTTTCGGCCAATATCCGATGGAGAAGGAATCATCGATTACATAATTGGGATTTGGCGTTCTACTTTGGTTGGAAAATCCGAAAAGCTCAATTTTTTTGTCAAGTTATTTCTTGTAGTCAAGTAGTCTAGTCAAGTCAATATAAGTATCGATTGAACTATTTTGTATGAGTTTTGATCATTCAATAACTATGAATTTTGATTGTGTTTGATAAATTTTGAATATAAATATCTTGCTAGATATCAGATA

Coding sequence (CDS)

ATGAGTTGGAGCCGAATGTTGGAGATGGACATCGACTTACAAAGAATCTTGGAGGAGTTTCTTCAATCCACTGCTCATGTGATGGACAATAATGAACTGGTTGATGAACATGGTCTAAATCAATCGCCAACTTGTGCATGTTGCGAACGATTCCTAGTACTTGATAACGATGTCAGTGGTGAACCTGAAGCCATTGGTATATGTGGCGATTGTAAGTTTTTGTTACTTGAAGATATGGAATTCCGTGAACAGGATTCTTATAATAGGGCGCTGCCAAGAGGAAGAAGAACAAGGCATGGTAGTTCAGAGTCTCCTGAAAGTCGTTTTTCGCAGGAATTCTCCCATATGATTAACTTGGTGAGGCAAAGTCAGTCGAGTATCTCTAGCTACGGGGATCGGTATGCAGATGGTTCTAATGCTACTTATGCTACGCAGGACTCGAGTTTGCTTATGAGCCCCAATCAATCTAGAAGATGGCGTCGAGCAAACTCTGATTCTGAAAATGATGGTTTAGATAGTATTGACTCTATGTTTCGAGAGAGTGGATCAAATTTCAGTTTTGGGTCTTACAGACATTCTTATGGTGATATTGATTTTGTTTCGTACGGTACTTATGGGGGTGACTCGGACGCTTCCATGGATGGACGAAGTTCCTTGGACACAGATGTTTTCGTTTTTCCTGGTGATGGATTCAATGATACCGATATAGACATTGATCCTATGCGTGCTGGTGTCGGCGATTGGGACTCGAGTGATGAGGAGGAGGATCTTGGTGAATTAACAGAAGCTGACACAGAGCAAGATGCACTCGAAGTAGAATCTTCTCAATCTAGGCCTCCACTTCAAGATTTTCAAGTTTCTAGTTCTTCTGGGAGAGTTAACTCTGGTAATTGGAATGAACAACTTTCTTCACCAGAATACGAACTCGGGCGAATCAGGAGGAATGGGCGATTTTATTCGAACATGAACTATTCACAGTCGGAATTACTATCTTTCGTTGAGAATTTTGGTGAATATCTTGACCAACAAGGCTTTGAACAACTTCTTGAGCAAATTGCCATGACGACCAGCTCAAGACGCGGAGCACCTCCTGCAGCTGTCTCTTCAGTGAAAAATCTCCCACTTTTGGTGATTTCTAAAGAACATTTGAAACATGACAATATATCCTGTGCAATTTGTAAGGATTTCTTACTCGTGGGCGTCGAAGTGAATCAACTACCTTGCCTTCATCTCTACCACCCTTCCTGCATCATGCCGTGGTTGCGTACACGGAATTCGTGCCCCCTTTGTCGATATGAACTTCCAACCGACGATCGAGATTACGAAGAGGGAAAGCGAAGTAGCATCATTACAGCAGAGGTCCAAGGAGTTGGAGCAAATCTAGAGTTTAGAACCAGCCAAGGAGAGGAGCTGAACAACATAGACTCTGCAGTTAATAACAGTAACAATTCAGGCAGACACGACGGTATAAGAAGTTGGGTGTTCGTGGCTGCTCCGATCGTTGGTCTTGCAGGTATAGCCCTGATGTTATGGTTTGGTAGCCCTCGGTGTGATCAAAGAGTACCCGTAGGCCAAGTTGCAGACAGAAGGCAACTTGATGCTCACATTGCTGATGCATTGAACCAAAGAGAGAACAGAAGCAGGAGATGGTGGTGA

Protein sequence

MSWSRMLEMDIDLQRILEEFLQSTAHVMDNNELVDEHGLNQSPTCACCERFLVLDNDVSGEPEAIGICGDCKFLLLEDMEFREQDSYNRALPRGRRTRHGSSESPESRFSQEFSHMINLVRQSQSSISSYGDRYADGSNATYATQDSSLLMSPNQSRRWRRANSDSENDGLDSIDSMFRESGSNFSFGSYRHSYGDIDFVSYGTYGGDSDASMDGRSSLDTDVFVFPGDGFNDTDIDIDPMRAGVGDWDSSDEEEDLGELTEADTEQDALEVESSQSRPPLQDFQVSSSSGRVNSGNWNEQLSSPEYELGRIRRNGRFYSNMNYSQSELLSFVENFGEYLDQQGFEQLLEQIAMTTSSRRGAPPAAVSSVKNLPLLVISKEHLKHDNISCAICKDFLLVGVEVNQLPCLHLYHPSCIMPWLRTRNSCPLCRYELPTDDRDYEEGKRSSIITAEVQGVGANLEFRTSQGEELNNIDSAVNNSNNSGRHDGIRSWVFVAAPIVGLAGIALMLWFGSPRCDQRVPVGQVADRRQLDAHIADALNQRENRSRRWW

Homology

[Close]

BLAST of Carg12632 vs. NCBI nr
Match: KAG7027514.1 (E3 ubiquitin-protein ligase RING1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1100.9 bits (2846), Expect = 0.0e+00
Identity = 551/551 (100.00%), Postives = 551/551 (100.00%), Query Frame = 0


Query: 1   MSWSRMLEMDIDLQRILEEFLQSTAHVMDNNELVDEHGLNQSPTCACCERFLVLDNDVSG 60
           MSWSRMLEMDIDLQRILEEFLQSTAHVMDNNELVDEHGLNQSPTCACCERFLVLDNDVSG
Sbjct: 1   MSWSRMLEMDIDLQRILEEFLQSTAHVMDNNELVDEHGLNQSPTCACCERFLVLDNDVSG 60

Query: 61  EPEAIGICGDCKFLLLEDMEFREQDSYNRALPRGRRTRHGSSESPESRFSQEFSHMINLV 120
           EPEAIGICGDCKFLLLEDMEFREQDSYNRALPRGRRTRHGSSESPESRFSQEFSHMINLV
Sbjct: 61  EPEAIGICGDCKFLLLEDMEFREQDSYNRALPRGRRTRHGSSESPESRFSQEFSHMINLV 120

Query: 121 RQSQSSISSYGDRYADGSNATYATQDSSLLMSPNQSRRWRRANSDSENDGLDSIDSMFRE 180
           RQSQSSISSYGDRYADGSNATYATQDSSLLMSPNQSRRWRRANSDSENDGLDSIDSMFRE
Sbjct: 121 RQSQSSISSYGDRYADGSNATYATQDSSLLMSPNQSRRWRRANSDSENDGLDSIDSMFRE 180

Query: 181 SGSNFSFGSYRHSYGDIDFVSYGTYGGDSDASMDGRSSLDTDVFVFPGDGFNDTDIDIDP 240
           SGSNFSFGSYRHSYGDIDFVSYGTYGGDSDASMDGRSSLDTDVFVFPGDGFNDTDIDIDP
Sbjct: 181 SGSNFSFGSYRHSYGDIDFVSYGTYGGDSDASMDGRSSLDTDVFVFPGDGFNDTDIDIDP 240

Query: 241 MRAGVGDWDSSDEEEDLGELTEADTEQDALEVESSQSRPPLQDFQVSSSSGRVNSGNWNE 300
           MRAGVGDWDSSDEEEDLGELTEADTEQDALEVESSQSRPPLQDFQVSSSSGRVNSGNWNE
Sbjct: 241 MRAGVGDWDSSDEEEDLGELTEADTEQDALEVESSQSRPPLQDFQVSSSSGRVNSGNWNE 300

Query: 301 QLSSPEYELGRIRRNGRFYSNMNYSQSELLSFVENFGEYLDQQGFEQLLEQIAMTTSSRR 360
           QLSSPEYELGRIRRNGRFYSNMNYSQSELLSFVENFGEYLDQQGFEQLLEQIAMTTSSRR
Sbjct: 301 QLSSPEYELGRIRRNGRFYSNMNYSQSELLSFVENFGEYLDQQGFEQLLEQIAMTTSSRR 360

Query: 361 GAPPAAVSSVKNLPLLVISKEHLKHDNISCAICKDFLLVGVEVNQLPCLHLYHPSCIMPW 420
           GAPPAAVSSVKNLPLLVISKEHLKHDNISCAICKDFLLVGVEVNQLPCLHLYHPSCIMPW
Sbjct: 361 GAPPAAVSSVKNLPLLVISKEHLKHDNISCAICKDFLLVGVEVNQLPCLHLYHPSCIMPW 420

Query: 421 LRTRNSCPLCRYELPTDDRDYEEGKRSSIITAEVQGVGANLEFRTSQGEELNNIDSAVNN 480
           LRTRNSCPLCRYELPTDDRDYEEGKRSSIITAEVQGVGANLEFRTSQGEELNNIDSAVNN
Sbjct: 421 LRTRNSCPLCRYELPTDDRDYEEGKRSSIITAEVQGVGANLEFRTSQGEELNNIDSAVNN 480

Query: 481 SNNSGRHDGIRSWVFVAAPIVGLAGIALMLWFGSPRCDQRVPVGQVADRRQLDAHIADAL 540
           SNNSGRHDGIRSWVFVAAPIVGLAGIALMLWFGSPRCDQRVPVGQVADRRQLDAHIADAL
Sbjct: 481 SNNSGRHDGIRSWVFVAAPIVGLAGIALMLWFGSPRCDQRVPVGQVADRRQLDAHIADAL 540

Query: 541 NQRENRSRRWW 552
           NQRENRSRRWW
Sbjct: 541 NQRENRSRRWW 551

[Close]

BLAST of Carg12632 vs. NCBI nr
Match: XP_022924889.1 (E3 ubiquitin-protein ligase Praja-2-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 1078.5 bits (2788), Expect = 0.0e+00
Identity = 541/551 (98.19%), Postives = 544/551 (98.73%), Query Frame = 0


Query: 1   MSWSRMLEMDIDLQRILEEFLQSTAHVMDNNELVDEHGLNQSPTCACCERFLVLDNDVSG 60
           MSWSRMLEMDIDLQRILEEFLQSTAHVMDNNELVDEHGLNQSPTCACCERFLVLDNDVSG
Sbjct: 1   MSWSRMLEMDIDLQRILEEFLQSTAHVMDNNELVDEHGLNQSPTCACCERFLVLDNDVSG 60

Query: 61  EPEAIGICGDCKFLLLEDMEFREQDSYNRALPRGRRTRHGSSESPESRFSQEFSHMINLV 120
           EPEAIGICGDCKFLLLEDMEF EQDSYNRA+PRGRRTRHGSSESPESRFSQEFSHMINLV
Sbjct: 61  EPEAIGICGDCKFLLLEDMEFPEQDSYNRAMPRGRRTRHGSSESPESRFSQEFSHMINLV 120

Query: 121 RQSQSSISSYGDRYADGSNATYATQDSSLLMSPNQSRRWRRANSDSENDGLDSIDSMFRE 180
           RQSQSSISSYGDRYADGSNATYA QDSSLLMSPNQSRRWRRANSDSENDGLDSIDSMFRE
Sbjct: 121 RQSQSSISSYGDRYADGSNATYAMQDSSLLMSPNQSRRWRRANSDSENDGLDSIDSMFRE 180

Query: 181 SGSNFSFGSYRHSYGDIDFVSYGTYGGDSDASMDGRSSLDTDVFVFPGDGFNDTDIDIDP 240
           SGSNFSFGSYRHS G IDFVSYGTYGGDSDASMDGRSSLDTDVFVFPGDGFNDTDIDIDP
Sbjct: 181 SGSNFSFGSYRHSSGGIDFVSYGTYGGDSDASMDGRSSLDTDVFVFPGDGFNDTDIDIDP 240

Query: 241 MRAGVGDWDSSDEEEDLGELTEADTEQDALEVESSQSRPPLQDFQVSSSSGRVNSGNWNE 300
           MRAGVGDWDSSDEEEDLGELTEADTEQDALEVESSQ+RPPLQDFQVSS+SGRVNSGNWNE
Sbjct: 241 MRAGVGDWDSSDEEEDLGELTEADTEQDALEVESSQARPPLQDFQVSSASGRVNSGNWNE 300

Query: 301 QLSSPEYELGRIRRNGRFYSNMNYSQSELLSFVENFGEYLDQQGFEQLLEQIAMTTSSRR 360
           QLSSPEYEL RIRRNGRFYSNMNYSQSELLSFVENFGEYLDQQGFEQLLEQIAMTTSSRR
Sbjct: 301 QLSSPEYELERIRRNGRFYSNMNYSQSELLSFVENFGEYLDQQGFEQLLEQIAMTTSSRR 360

Query: 361 GAPPAAVSSVKNLPLLVISKEHLKHDNISCAICKDFLLVGVEVNQLPCLHLYHPSCIMPW 420
           GAPPAAVSSVKNLPLLVISKEHLKHDNISCAICKDFLLVGV VNQLPCLHLYHPSCIMPW
Sbjct: 361 GAPPAAVSSVKNLPLLVISKEHLKHDNISCAICKDFLLVGVAVNQLPCLHLYHPSCIMPW 420

Query: 421 LRTRNSCPLCRYELPTDDRDYEEGKRSSIITAEVQGVGANLEFRTSQGEELNNIDSAVNN 480
           LRTRNSCPLCRYELPTDDRDYEEGKRSSI TAEVQGVGANLEFRTSQGEELNNIDSAVNN
Sbjct: 421 LRTRNSCPLCRYELPTDDRDYEEGKRSSINTAEVQGVGANLEFRTSQGEELNNIDSAVNN 480

Query: 481 SNNSGRHDGIRSWVFVAAPIVGLAGIALMLWFGSPRCDQRVPVGQVADRRQLDAHIADAL 540
           SNNSGRHDGIRSWVFVAAPIVGLAGIALMLWFGSPRCDQRVPVGQVADRRQLDAHIADAL
Sbjct: 481 SNNSGRHDGIRSWVFVAAPIVGLAGIALMLWFGSPRCDQRVPVGQVADRRQLDAHIADAL 540

Query: 541 NQRENRSRRWW 552
           NQRENRSRRWW
Sbjct: 541 NQRENRSRRWW 551

[Close]

BLAST of Carg12632 vs. NCBI nr
Match: XP_022924884.1 (E3 ubiquitin-protein ligase Praja-2-like isoform X1 [Cucurbita moschata] >XP_022924886.1 E3 ubiquitin-protein ligase Praja-2-like isoform X1 [Cucurbita moschata] >XP_022924887.1 E3 ubiquitin-protein ligase Praja-2-like isoform X1 [Cucurbita moschata] >XP_022924888.1 E3 ubiquitin-protein ligase Praja-2-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 1062.8 bits (2747), Expect = 1.0e-306
Identity = 533/545 (97.80%), Postives = 537/545 (98.53%), Query Frame = 0


Query: 7   LEMDIDLQRILEEFLQSTAHVMDNNELVDEHGLNQSPTCACCERFLVLDNDVSGEPEAIG 66
           + MDIDLQRILEEFLQSTAHVMDNNELVDEHGLNQSPTCACCERFLVLDNDVSGEPEAIG
Sbjct: 8   MRMDIDLQRILEEFLQSTAHVMDNNELVDEHGLNQSPTCACCERFLVLDNDVSGEPEAIG 67

Query: 67  ICGDCKFLLLEDMEFREQDSYNRALPRGRRTRHGSSESPESRFSQEFSHMINLVRQSQSS 126
           ICGDCKFLLLEDMEF EQDSYNRA+PRGRRTRHGSSESPESRFSQEFSHMINLVRQSQSS
Sbjct: 68  ICGDCKFLLLEDMEFPEQDSYNRAMPRGRRTRHGSSESPESRFSQEFSHMINLVRQSQSS 127

Query: 127 ISSYGDRYADGSNATYATQDSSLLMSPNQSRRWRRANSDSENDGLDSIDSMFRESGSNFS 186
           ISSYGDRYADGSNATYA QDSSLLMSPNQSRRWRRANSDSENDGLDSIDSMFRESGSNFS
Sbjct: 128 ISSYGDRYADGSNATYAMQDSSLLMSPNQSRRWRRANSDSENDGLDSIDSMFRESGSNFS 187

Query: 187 FGSYRHSYGDIDFVSYGTYGGDSDASMDGRSSLDTDVFVFPGDGFNDTDIDIDPMRAGVG 246
           FGSYRHS G IDFVSYGTYGGDSDASMDGRSSLDTDVFVFPGDGFNDTDIDIDPMRAGVG
Sbjct: 188 FGSYRHSSGGIDFVSYGTYGGDSDASMDGRSSLDTDVFVFPGDGFNDTDIDIDPMRAGVG 247

Query: 247 DWDSSDEEEDLGELTEADTEQDALEVESSQSRPPLQDFQVSSSSGRVNSGNWNEQLSSPE 306
           DWDSSDEEEDLGELTEADTEQDALEVESSQ+RPPLQDFQVSS+SGRVNSGNWNEQLSSPE
Sbjct: 248 DWDSSDEEEDLGELTEADTEQDALEVESSQARPPLQDFQVSSASGRVNSGNWNEQLSSPE 307

Query: 307 YELGRIRRNGRFYSNMNYSQSELLSFVENFGEYLDQQGFEQLLEQIAMTTSSRRGAPPAA 366
           YEL RIRRNGRFYSNMNYSQSELLSFVENFGEYLDQQGFEQLLEQIAMTTSSRRGAPPAA
Sbjct: 308 YELERIRRNGRFYSNMNYSQSELLSFVENFGEYLDQQGFEQLLEQIAMTTSSRRGAPPAA 367

Query: 367 VSSVKNLPLLVISKEHLKHDNISCAICKDFLLVGVEVNQLPCLHLYHPSCIMPWLRTRNS 426
           VSSVKNLPLLVISKEHLKHDNISCAICKDFLLVGV VNQLPCLHLYHPSCIMPWLRTRNS
Sbjct: 368 VSSVKNLPLLVISKEHLKHDNISCAICKDFLLVGVAVNQLPCLHLYHPSCIMPWLRTRNS 427

Query: 427 CPLCRYELPTDDRDYEEGKRSSIITAEVQGVGANLEFRTSQGEELNNIDSAVNNSNNSGR 486
           CPLCRYELPTDDRDYEEGKRSSI TAEVQGVGANLEFRTSQGEELNNIDSAVNNSNNSGR
Sbjct: 428 CPLCRYELPTDDRDYEEGKRSSINTAEVQGVGANLEFRTSQGEELNNIDSAVNNSNNSGR 487

Query: 487 HDGIRSWVFVAAPIVGLAGIALMLWFGSPRCDQRVPVGQVADRRQLDAHIADALNQRENR 546
           HDGIRSWVFVAAPIVGLAGIALMLWFGSPRCDQRVPVGQVADRRQLDAHIADALNQRENR
Sbjct: 488 HDGIRSWVFVAAPIVGLAGIALMLWFGSPRCDQRVPVGQVADRRQLDAHIADALNQRENR 547

Query: 547 SRRWW 552
           SRRWW
Sbjct: 548 SRRWW 552

[Close]

BLAST of Carg12632 vs. NCBI nr
Match: XP_022924890.1 (E3 ubiquitin-protein ligase Praja-2-like isoform X3 [Cucurbita moschata])

HSP 1 Score: 1062.4 bits (2746), Expect = 1.3e-306
Identity = 533/543 (98.16%), Postives = 536/543 (98.71%), Query Frame = 0


Query: 9   MDIDLQRILEEFLQSTAHVMDNNELVDEHGLNQSPTCACCERFLVLDNDVSGEPEAIGIC 68
           MDIDLQRILEEFLQSTAHVMDNNELVDEHGLNQSPTCACCERFLVLDNDVSGEPEAIGIC
Sbjct: 1   MDIDLQRILEEFLQSTAHVMDNNELVDEHGLNQSPTCACCERFLVLDNDVSGEPEAIGIC 60

Query: 69  GDCKFLLLEDMEFREQDSYNRALPRGRRTRHGSSESPESRFSQEFSHMINLVRQSQSSIS 128
           GDCKFLLLEDMEF EQDSYNRA+PRGRRTRHGSSESPESRFSQEFSHMINLVRQSQSSIS
Sbjct: 61  GDCKFLLLEDMEFPEQDSYNRAMPRGRRTRHGSSESPESRFSQEFSHMINLVRQSQSSIS 120

Query: 129 SYGDRYADGSNATYATQDSSLLMSPNQSRRWRRANSDSENDGLDSIDSMFRESGSNFSFG 188
           SYGDRYADGSNATYA QDSSLLMSPNQSRRWRRANSDSENDGLDSIDSMFRESGSNFSFG
Sbjct: 121 SYGDRYADGSNATYAMQDSSLLMSPNQSRRWRRANSDSENDGLDSIDSMFRESGSNFSFG 180

Query: 189 SYRHSYGDIDFVSYGTYGGDSDASMDGRSSLDTDVFVFPGDGFNDTDIDIDPMRAGVGDW 248
           SYRHS G IDFVSYGTYGGDSDASMDGRSSLDTDVFVFPGDGFNDTDIDIDPMRAGVGDW
Sbjct: 181 SYRHSSGGIDFVSYGTYGGDSDASMDGRSSLDTDVFVFPGDGFNDTDIDIDPMRAGVGDW 240

Query: 249 DSSDEEEDLGELTEADTEQDALEVESSQSRPPLQDFQVSSSSGRVNSGNWNEQLSSPEYE 308
           DSSDEEEDLGELTEADTEQDALEVESSQ+RPPLQDFQVSS+SGRVNSGNWNEQLSSPEYE
Sbjct: 241 DSSDEEEDLGELTEADTEQDALEVESSQARPPLQDFQVSSASGRVNSGNWNEQLSSPEYE 300

Query: 309 LGRIRRNGRFYSNMNYSQSELLSFVENFGEYLDQQGFEQLLEQIAMTTSSRRGAPPAAVS 368
           L RIRRNGRFYSNMNYSQSELLSFVENFGEYLDQQGFEQLLEQIAMTTSSRRGAPPAAVS
Sbjct: 301 LERIRRNGRFYSNMNYSQSELLSFVENFGEYLDQQGFEQLLEQIAMTTSSRRGAPPAAVS 360

Query: 369 SVKNLPLLVISKEHLKHDNISCAICKDFLLVGVEVNQLPCLHLYHPSCIMPWLRTRNSCP 428
           SVKNLPLLVISKEHLKHDNISCAICKDFLLVGV VNQLPCLHLYHPSCIMPWLRTRNSCP
Sbjct: 361 SVKNLPLLVISKEHLKHDNISCAICKDFLLVGVAVNQLPCLHLYHPSCIMPWLRTRNSCP 420

Query: 429 LCRYELPTDDRDYEEGKRSSIITAEVQGVGANLEFRTSQGEELNNIDSAVNNSNNSGRHD 488
           LCRYELPTDDRDYEEGKRSSI TAEVQGVGANLEFRTSQGEELNNIDSAVNNSNNSGRHD
Sbjct: 421 LCRYELPTDDRDYEEGKRSSINTAEVQGVGANLEFRTSQGEELNNIDSAVNNSNNSGRHD 480

Query: 489 GIRSWVFVAAPIVGLAGIALMLWFGSPRCDQRVPVGQVADRRQLDAHIADALNQRENRSR 548
           GIRSWVFVAAPIVGLAGIALMLWFGSPRCDQRVPVGQVADRRQLDAHIADALNQRENRSR
Sbjct: 481 GIRSWVFVAAPIVGLAGIALMLWFGSPRCDQRVPVGQVADRRQLDAHIADALNQRENRSR 540

Query: 549 RWW 552
           RWW
Sbjct: 541 RWW 543

[Close]

BLAST of Carg12632 vs. NCBI nr
Match: XP_023517907.1 (E3 ubiquitin-protein ligase Praja-2-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1050.4 bits (2715), Expect = 5.3e-303
Identity = 532/551 (96.55%), Postives = 534/551 (96.91%), Query Frame = 0


Query: 1   MSWSRMLEMDIDLQRILEEFLQSTAHVMDNNELVDEHGLNQSPTCACCERFLVLDNDVSG 60
           MS SRMLEMDIDLQ ILEEFLQSTAHVMDNNELVDE GLNQSPTCACCERFLVLDNDVSG
Sbjct: 1   MSSSRMLEMDIDLQGILEEFLQSTAHVMDNNELVDERGLNQSPTCACCERFLVLDNDVSG 60

Query: 61  EPEAIGICGDCKFLLLEDMEFREQDSYNRALPRGRRTRHGSSESPESRFSQEFSHMINLV 120
           EPEAIGIC DCKFLLLEDMEF EQDSYNRALPRGRRTRHGSSES ESRFSQEFSHMINLV
Sbjct: 61  EPEAIGICSDCKFLLLEDMEFPEQDSYNRALPRGRRTRHGSSESLESRFSQEFSHMINLV 120

Query: 121 RQSQSSISSYGDRYADGSNATYATQDSSLLMSPNQSRRWRRANSDSENDGLDSIDSMFRE 180
           RQSQSSISSYGDRYADGSNATYATQDSSLLMSPNQSRRW RANSDSENDGLDSIDSMFRE
Sbjct: 121 RQSQSSISSYGDRYADGSNATYATQDSSLLMSPNQSRRWHRANSDSENDGLDSIDSMFRE 180

Query: 181 SGSNFSFGSYRHSYGDIDFVSYGTYGGDSDASMDGRSSLDTDVFVFPGDGFNDTDIDIDP 240
           SGSNFSFGSYRHSYGDIDFVSY TYGGDSDASMDGRSSLDTDVFVFPGDGFNDTDIDIDP
Sbjct: 181 SGSNFSFGSYRHSYGDIDFVSYRTYGGDSDASMDGRSSLDTDVFVFPGDGFNDTDIDIDP 240

Query: 241 MRAGVGDWDSSDEEEDLGELTEADTEQDALEVESSQSRPPLQDFQVSSSSGRVNSGNWNE 300
           MRAGVGDWD SDEEEDLGELTEADTEQDALEVESSQ+RPPLQDFQVSS+SGRVNSGNWNE
Sbjct: 241 MRAGVGDWDLSDEEEDLGELTEADTEQDALEVESSQARPPLQDFQVSSASGRVNSGNWNE 300

Query: 301 QLSSPEYELGRIRRNGRFYSNMNYSQSELLSFVENFGEYLDQQGFEQLLEQIAMTTSSRR 360
           QLSSPEYEL RIRRNGRFYSNMNYSQSELLSFVENFGEYLDQQGFEQLLEQIAMTTSSRR
Sbjct: 301 QLSSPEYELERIRRNGRFYSNMNYSQSELLSFVENFGEYLDQQGFEQLLEQIAMTTSSRR 360

Query: 361 GAPPAAVSSVKNLPLLVISKEHLKHDNISCAICKDFLLVGVEVNQLPCLHLYHPSCIMPW 420
           GAPPAAVSSVKNLPLLVISKEHLKHDNISCAICKDFL V VEVNQLPCLHLYHPSCIMPW
Sbjct: 361 GAPPAAVSSVKNLPLLVISKEHLKHDNISCAICKDFLHVSVEVNQLPCLHLYHPSCIMPW 420

Query: 421 LRTRNSCPLCRYELPTDDRDYEEGKRSSIITAEVQGVGANLEFRTSQGEELNNIDSAVNN 480
           L TRNSCPLCRYELPTDDRDYEEGKRSSI TAEVQ VGANLEFRTSQGEELNNIDSAVNN
Sbjct: 421 LSTRNSCPLCRYELPTDDRDYEEGKRSSINTAEVQVVGANLEFRTSQGEELNNIDSAVNN 480

Query: 481 SNNSGRHDGIRSWVFVAAPIVGLAGIALMLWFGSPRCDQRVPVGQVADRRQLDAHIADAL 540
           SNNSGRHDGIRSWVFVAAPIVGLAGIALMLWFGSPRCDQRVP GQ ADRRQLDAHIADAL
Sbjct: 481 SNNSGRHDGIRSWVFVAAPIVGLAGIALMLWFGSPRCDQRVPGGQAADRRQLDAHIADAL 540

Query: 541 NQRENRSRRWW 552
           NQRENRSRRWW
Sbjct: 541 NQRENRSRRWW 551

[Close]

BLAST of Carg12632 vs. ExPASy Swiss-Prot
Match: Q8LPN7 (E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19950 PE=1 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 1.4e-27
Identity = 54/122 (44.26%), Postives = 79/122 (64.75%), Query Frame = 0


Query: 335 NFGEYLDQQGFEQLLEQIAMTTSSRRGAPPAAVSSVKNLPLLVISKEHLKHDNISCAICK 394
           NFG+Y    G EQL++Q+A    +R G PPA+ S++  LP + ++K+ LK +   CA+C 
Sbjct: 161 NFGDYFFGPGLEQLIQQLAENDPNRYGTPPASKSAIDALPTVKVTKDMLKSEMNQCAVCM 220

Query: 395 DFLLVGVEVNQLPCLHLYHPSCIMPWLRTRNSCPLCRYELPTDDRDYEEGKRSSIITAEV 454
           D    G +V Q+PC H++H  C++PWL   NSCP+CR+ELPTDD DYE   + S  + + 
Sbjct: 221 DEFEDGSDVKQMPCKHVFHQDCLLPWLELHNSCPVCRFELPTDDPDYENRSQGSQGSGDG 280

Query: 455 QG 457
           QG
Sbjct: 281 QG 282

[Close]

BLAST of Carg12632 vs. ExPASy Swiss-Prot
Match: P0CH30 (E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum OX=3635 GN=RING1 PE=1 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 2.3e-27
Identity = 54/114 (47.37%), Postives = 74/114 (64.91%), Query Frame = 0


Query: 335 NFGEYLDQQGFEQLLEQIAMTTSSRRGAPPAAVSSVKNLPLLVISKEHLKHDNISCAICK 394
           N G+Y    G EQL++Q+A    +R G PPA+ S+++ LPL+ I+K +L  +   CA+C 
Sbjct: 169 NIGDYFIGPGLEQLIQQLAENDPNRYGTPPASKSAIEALPLVNITKSNLNSEFNQCAVCM 228

Query: 395 DFLLVGVEVNQLPCLHLYHPSCIMPWLRTRNSCPLCRYELPTDDRDYEEGKRSS 449
           D    G E  Q+PC HLYH  C++PWL   NSCP+CR+ELPTDD DYE   R +
Sbjct: 229 DDFEEGTEAKQMPCKHLYHKDCLLPWLELHNSCPVCRHELPTDDPDYERRVRGA 282

[Close]

BLAST of Carg12632 vs. ExPASy Swiss-Prot
Match: O22197 (Probable E3 ubiquitin-protein ligase RHC1A OS=Arabidopsis thaliana OX=3702 GN=RHC1A PE=2 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 5.0e-22
Identity = 47/102 (46.08%), Postives = 67/102 (65.69%), Query Frame = 0


Query: 335 NFGEYLDQQGFEQLLEQIAMTTSSRRGAPPAAVSSVKNLPLLVISKEHLKHDNISCAICK 394
           N G+Y    G E+L EQ++  T +RRG PPA  S++  LP + I++ HL+  + +C +CK
Sbjct: 136 NTGDYFFGPGLEELFEQLSAGT-TRRGPPPAPRSAIDALPTIKIAQRHLRSSDSNCPVCK 195

Query: 395 DFLLVGVEVNQLPCLHLYHPSCIMPWLRTRNSCPLCRYELPT 437
           D   +G E  Q+PC H+YH  CI+PWL   NSCP+CR ELP+
Sbjct: 196 DEFELGSEAKQMPCNHIYHSDCIVPWLVQHNSCPVCRQELPS 236

[Close]

BLAST of Carg12632 vs. ExPASy Swiss-Prot
Match: Q9SPL2 (E3 ubiquitin-protein ligase CIP8 OS=Arabidopsis thaliana OX=3702 GN=CIP8 PE=1 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 8.6e-22
Identity = 83/239 (34.73%), Postives = 116/239 (48.54%), Query Frame = 0


Query: 218 SLDTDVFVFPGDGFNDTDIDIDPMRAGVGDWDSSDEEEDLGELTEADTEQDALEVESSQS 277
           S + D F    +  N+ D D D      GD +  DEEE+L    E D E D       ++
Sbjct: 101 SYEDDFFRLELNSRNEIDDDEDEDEDD-GDEEEEDEEENLTVNDEEDEEDDL----RRRN 160

Query: 278 RPPLQDFQVSSSSGRVNSGNWNEQLSSPEYELGRIRRNGRFYSNMNYSQSELLSFVENFG 337
           R PL   Q  S +GR    +W E L   E      R     Y+              N  
Sbjct: 161 RFPLTTTQ--SRTGRNRILDWAEILMGIEDNSIEFRMESDRYAG-------------NPA 220

Query: 338 EYLDQ-QGFEQLLEQIAMTT----SSRRGAPPAAVSSVKNLPLLVISKEHLKHDNISCAI 397
           +Y+D   G+E LL+ +A         RRGAPPAA S+++ L    +S    +   + CA+
Sbjct: 221 DYIDDAAGYEALLQNLAEGDGGGGGGRRGAPPAAKSAIEALETFEVSSSEGEMVMV-CAV 280

Query: 398 CKDFLLVGVEVNQLPCLHLYHPSCIMPWLRTRNSCPLCRYELPTDDRDYEEGKRSSIIT 452
           CKD +++G    +LPC H YH  CI+PWL TRNSCP+CR++L TDD +YEE ++    T
Sbjct: 281 CKDGMVMGETGKKLPCGHCYHGDCIVPWLGTRNSCPVCRFQLETDDAEYEEERKKRTST 318

[Close]

BLAST of Carg12632 vs. ExPASy Swiss-Prot
Match: Q9SNB6 (E3 ubiquitin-protein ligase RDUF1 OS=Arabidopsis thaliana OX=3702 GN=RDUF1 PE=1 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 3.3e-21
Identity = 68/196 (34.69%), Postives = 103/196 (52.55%), Query Frame = 0


Query: 311 RIRRNGRFYSNMNYSQSELLSFVENFGEYLDQQGFEQLLEQIAMTTSS-----RRGAPPA 370
           R RR   FY + + S S L    ++  E L   GFE+LLEQ++   +S     R G PPA
Sbjct: 133 RERRAYEFYYD-DGSGSGLRPLPDSVSEILMGSGFERLLEQLSQIEASGNGIGRSGNPPA 192

Query: 371 AVSSVKNLPLLVISKEHLKHDNISCAICKDFLLVGVEVNQLPCLHLYHPSCIMPWLRTRN 430
           + S++++LP + IS  H K +  +CA+C +    G+E  ++PC H++H  CI+PWL  RN
Sbjct: 193 SKSAIESLPRVEISDCHTKAE-ANCAVCTEVFEAGIEGREMPCKHIFHGDCIVPWLSIRN 252

Query: 431 SCPLCRYELPTD--DRDYEEGKRSSIITAEVQGVG---ANLEFRTSQGEELNNIDSAVNN 490
           SCP+CR+ELP+D   R  EE     +    + G G           +GE +  +     +
Sbjct: 253 SCPVCRFELPSDPIQRSNEEEHAVGMTIWRLPGGGFAVGRFNAGVREGERILPVVLTEMD 312

Query: 491 SNNSGRHDGIR--SWV 495
               G ++G R  SWV
Sbjct: 313 GGGLGSNEGPRRISWV 326

[Close]

BLAST of Carg12632 vs. ExPASy TrEMBL
Match: A0A6J1EAH4 (E3 ubiquitin-protein ligase Praja-2-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111432303 PE=4 SV=1)

HSP 1 Score: 1078.5 bits (2788), Expect = 0.0e+00
Identity = 541/551 (98.19%), Postives = 544/551 (98.73%), Query Frame = 0


Query: 1   MSWSRMLEMDIDLQRILEEFLQSTAHVMDNNELVDEHGLNQSPTCACCERFLVLDNDVSG 60
           MSWSRMLEMDIDLQRILEEFLQSTAHVMDNNELVDEHGLNQSPTCACCERFLVLDNDVSG
Sbjct: 1   MSWSRMLEMDIDLQRILEEFLQSTAHVMDNNELVDEHGLNQSPTCACCERFLVLDNDVSG 60

Query: 61  EPEAIGICGDCKFLLLEDMEFREQDSYNRALPRGRRTRHGSSESPESRFSQEFSHMINLV 120
           EPEAIGICGDCKFLLLEDMEF EQDSYNRA+PRGRRTRHGSSESPESRFSQEFSHMINLV
Sbjct: 61  EPEAIGICGDCKFLLLEDMEFPEQDSYNRAMPRGRRTRHGSSESPESRFSQEFSHMINLV 120

Query: 121 RQSQSSISSYGDRYADGSNATYATQDSSLLMSPNQSRRWRRANSDSENDGLDSIDSMFRE 180
           RQSQSSISSYGDRYADGSNATYA QDSSLLMSPNQSRRWRRANSDSENDGLDSIDSMFRE
Sbjct: 121 RQSQSSISSYGDRYADGSNATYAMQDSSLLMSPNQSRRWRRANSDSENDGLDSIDSMFRE 180

Query: 181 SGSNFSFGSYRHSYGDIDFVSYGTYGGDSDASMDGRSSLDTDVFVFPGDGFNDTDIDIDP 240
           SGSNFSFGSYRHS G IDFVSYGTYGGDSDASMDGRSSLDTDVFVFPGDGFNDTDIDIDP
Sbjct: 181 SGSNFSFGSYRHSSGGIDFVSYGTYGGDSDASMDGRSSLDTDVFVFPGDGFNDTDIDIDP 240

Query: 241 MRAGVGDWDSSDEEEDLGELTEADTEQDALEVESSQSRPPLQDFQVSSSSGRVNSGNWNE 300
           MRAGVGDWDSSDEEEDLGELTEADTEQDALEVESSQ+RPPLQDFQVSS+SGRVNSGNWNE
Sbjct: 241 MRAGVGDWDSSDEEEDLGELTEADTEQDALEVESSQARPPLQDFQVSSASGRVNSGNWNE 300

Query: 301 QLSSPEYELGRIRRNGRFYSNMNYSQSELLSFVENFGEYLDQQGFEQLLEQIAMTTSSRR 360
           QLSSPEYEL RIRRNGRFYSNMNYSQSELLSFVENFGEYLDQQGFEQLLEQIAMTTSSRR
Sbjct: 301 QLSSPEYELERIRRNGRFYSNMNYSQSELLSFVENFGEYLDQQGFEQLLEQIAMTTSSRR 360

Query: 361 GAPPAAVSSVKNLPLLVISKEHLKHDNISCAICKDFLLVGVEVNQLPCLHLYHPSCIMPW 420
           GAPPAAVSSVKNLPLLVISKEHLKHDNISCAICKDFLLVGV VNQLPCLHLYHPSCIMPW
Sbjct: 361 GAPPAAVSSVKNLPLLVISKEHLKHDNISCAICKDFLLVGVAVNQLPCLHLYHPSCIMPW 420

Query: 421 LRTRNSCPLCRYELPTDDRDYEEGKRSSIITAEVQGVGANLEFRTSQGEELNNIDSAVNN 480
           LRTRNSCPLCRYELPTDDRDYEEGKRSSI TAEVQGVGANLEFRTSQGEELNNIDSAVNN
Sbjct: 421 LRTRNSCPLCRYELPTDDRDYEEGKRSSINTAEVQGVGANLEFRTSQGEELNNIDSAVNN 480

Query: 481 SNNSGRHDGIRSWVFVAAPIVGLAGIALMLWFGSPRCDQRVPVGQVADRRQLDAHIADAL 540
           SNNSGRHDGIRSWVFVAAPIVGLAGIALMLWFGSPRCDQRVPVGQVADRRQLDAHIADAL
Sbjct: 481 SNNSGRHDGIRSWVFVAAPIVGLAGIALMLWFGSPRCDQRVPVGQVADRRQLDAHIADAL 540

Query: 541 NQRENRSRRWW 552
           NQRENRSRRWW
Sbjct: 541 NQRENRSRRWW 551

[Close]

BLAST of Carg12632 vs. ExPASy TrEMBL
Match: A0A6J1EAH0 (E3 ubiquitin-protein ligase Praja-2-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111432303 PE=4 SV=1)

HSP 1 Score: 1062.8 bits (2747), Expect = 5.0e-307
Identity = 533/545 (97.80%), Postives = 537/545 (98.53%), Query Frame = 0


Query: 7   LEMDIDLQRILEEFLQSTAHVMDNNELVDEHGLNQSPTCACCERFLVLDNDVSGEPEAIG 66
           + MDIDLQRILEEFLQSTAHVMDNNELVDEHGLNQSPTCACCERFLVLDNDVSGEPEAIG
Sbjct: 8   MRMDIDLQRILEEFLQSTAHVMDNNELVDEHGLNQSPTCACCERFLVLDNDVSGEPEAIG 67

Query: 67  ICGDCKFLLLEDMEFREQDSYNRALPRGRRTRHGSSESPESRFSQEFSHMINLVRQSQSS 126
           ICGDCKFLLLEDMEF EQDSYNRA+PRGRRTRHGSSESPESRFSQEFSHMINLVRQSQSS
Sbjct: 68  ICGDCKFLLLEDMEFPEQDSYNRAMPRGRRTRHGSSESPESRFSQEFSHMINLVRQSQSS 127

Query: 127 ISSYGDRYADGSNATYATQDSSLLMSPNQSRRWRRANSDSENDGLDSIDSMFRESGSNFS 186
           ISSYGDRYADGSNATYA QDSSLLMSPNQSRRWRRANSDSENDGLDSIDSMFRESGSNFS
Sbjct: 128 ISSYGDRYADGSNATYAMQDSSLLMSPNQSRRWRRANSDSENDGLDSIDSMFRESGSNFS 187

Query: 187 FGSYRHSYGDIDFVSYGTYGGDSDASMDGRSSLDTDVFVFPGDGFNDTDIDIDPMRAGVG 246
           FGSYRHS G IDFVSYGTYGGDSDASMDGRSSLDTDVFVFPGDGFNDTDIDIDPMRAGVG
Sbjct: 188 FGSYRHSSGGIDFVSYGTYGGDSDASMDGRSSLDTDVFVFPGDGFNDTDIDIDPMRAGVG 247

Query: 247 DWDSSDEEEDLGELTEADTEQDALEVESSQSRPPLQDFQVSSSSGRVNSGNWNEQLSSPE 306
           DWDSSDEEEDLGELTEADTEQDALEVESSQ+RPPLQDFQVSS+SGRVNSGNWNEQLSSPE
Sbjct: 248 DWDSSDEEEDLGELTEADTEQDALEVESSQARPPLQDFQVSSASGRVNSGNWNEQLSSPE 307

Query: 307 YELGRIRRNGRFYSNMNYSQSELLSFVENFGEYLDQQGFEQLLEQIAMTTSSRRGAPPAA 366
           YEL RIRRNGRFYSNMNYSQSELLSFVENFGEYLDQQGFEQLLEQIAMTTSSRRGAPPAA
Sbjct: 308 YELERIRRNGRFYSNMNYSQSELLSFVENFGEYLDQQGFEQLLEQIAMTTSSRRGAPPAA 367

Query: 367 VSSVKNLPLLVISKEHLKHDNISCAICKDFLLVGVEVNQLPCLHLYHPSCIMPWLRTRNS 426
           VSSVKNLPLLVISKEHLKHDNISCAICKDFLLVGV VNQLPCLHLYHPSCIMPWLRTRNS
Sbjct: 368 VSSVKNLPLLVISKEHLKHDNISCAICKDFLLVGVAVNQLPCLHLYHPSCIMPWLRTRNS 427

Query: 427 CPLCRYELPTDDRDYEEGKRSSIITAEVQGVGANLEFRTSQGEELNNIDSAVNNSNNSGR 486
           CPLCRYELPTDDRDYEEGKRSSI TAEVQGVGANLEFRTSQGEELNNIDSAVNNSNNSGR
Sbjct: 428 CPLCRYELPTDDRDYEEGKRSSINTAEVQGVGANLEFRTSQGEELNNIDSAVNNSNNSGR 487

Query: 487 HDGIRSWVFVAAPIVGLAGIALMLWFGSPRCDQRVPVGQVADRRQLDAHIADALNQRENR 546
           HDGIRSWVFVAAPIVGLAGIALMLWFGSPRCDQRVPVGQVADRRQLDAHIADALNQRENR
Sbjct: 488 HDGIRSWVFVAAPIVGLAGIALMLWFGSPRCDQRVPVGQVADRRQLDAHIADALNQRENR 547

Query: 547 SRRWW 552
           SRRWW
Sbjct: 548 SRRWW 552

[Close]

BLAST of Carg12632 vs. ExPASy TrEMBL
Match: A0A6J1EGC2 (E3 ubiquitin-protein ligase Praja-2-like isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111432303 PE=4 SV=1)

HSP 1 Score: 1062.4 bits (2746), Expect = 6.5e-307
Identity = 533/543 (98.16%), Postives = 536/543 (98.71%), Query Frame = 0


Query: 9   MDIDLQRILEEFLQSTAHVMDNNELVDEHGLNQSPTCACCERFLVLDNDVSGEPEAIGIC 68
           MDIDLQRILEEFLQSTAHVMDNNELVDEHGLNQSPTCACCERFLVLDNDVSGEPEAIGIC
Sbjct: 1   MDIDLQRILEEFLQSTAHVMDNNELVDEHGLNQSPTCACCERFLVLDNDVSGEPEAIGIC 60

Query: 69  GDCKFLLLEDMEFREQDSYNRALPRGRRTRHGSSESPESRFSQEFSHMINLVRQSQSSIS 128
           GDCKFLLLEDMEF EQDSYNRA+PRGRRTRHGSSESPESRFSQEFSHMINLVRQSQSSIS
Sbjct: 61  GDCKFLLLEDMEFPEQDSYNRAMPRGRRTRHGSSESPESRFSQEFSHMINLVRQSQSSIS 120

Query: 129 SYGDRYADGSNATYATQDSSLLMSPNQSRRWRRANSDSENDGLDSIDSMFRESGSNFSFG 188
           SYGDRYADGSNATYA QDSSLLMSPNQSRRWRRANSDSENDGLDSIDSMFRESGSNFSFG
Sbjct: 121 SYGDRYADGSNATYAMQDSSLLMSPNQSRRWRRANSDSENDGLDSIDSMFRESGSNFSFG 180

Query: 189 SYRHSYGDIDFVSYGTYGGDSDASMDGRSSLDTDVFVFPGDGFNDTDIDIDPMRAGVGDW 248
           SYRHS G IDFVSYGTYGGDSDASMDGRSSLDTDVFVFPGDGFNDTDIDIDPMRAGVGDW
Sbjct: 181 SYRHSSGGIDFVSYGTYGGDSDASMDGRSSLDTDVFVFPGDGFNDTDIDIDPMRAGVGDW 240

Query: 249 DSSDEEEDLGELTEADTEQDALEVESSQSRPPLQDFQVSSSSGRVNSGNWNEQLSSPEYE 308
           DSSDEEEDLGELTEADTEQDALEVESSQ+RPPLQDFQVSS+SGRVNSGNWNEQLSSPEYE
Sbjct: 241 DSSDEEEDLGELTEADTEQDALEVESSQARPPLQDFQVSSASGRVNSGNWNEQLSSPEYE 300

Query: 309 LGRIRRNGRFYSNMNYSQSELLSFVENFGEYLDQQGFEQLLEQIAMTTSSRRGAPPAAVS 368
           L RIRRNGRFYSNMNYSQSELLSFVENFGEYLDQQGFEQLLEQIAMTTSSRRGAPPAAVS
Sbjct: 301 LERIRRNGRFYSNMNYSQSELLSFVENFGEYLDQQGFEQLLEQIAMTTSSRRGAPPAAVS 360

Query: 369 SVKNLPLLVISKEHLKHDNISCAICKDFLLVGVEVNQLPCLHLYHPSCIMPWLRTRNSCP 428
           SVKNLPLLVISKEHLKHDNISCAICKDFLLVGV VNQLPCLHLYHPSCIMPWLRTRNSCP
Sbjct: 361 SVKNLPLLVISKEHLKHDNISCAICKDFLLVGVAVNQLPCLHLYHPSCIMPWLRTRNSCP 420

Query: 429 LCRYELPTDDRDYEEGKRSSIITAEVQGVGANLEFRTSQGEELNNIDSAVNNSNNSGRHD 488
           LCRYELPTDDRDYEEGKRSSI TAEVQGVGANLEFRTSQGEELNNIDSAVNNSNNSGRHD
Sbjct: 421 LCRYELPTDDRDYEEGKRSSINTAEVQGVGANLEFRTSQGEELNNIDSAVNNSNNSGRHD 480

Query: 489 GIRSWVFVAAPIVGLAGIALMLWFGSPRCDQRVPVGQVADRRQLDAHIADALNQRENRSR 548
           GIRSWVFVAAPIVGLAGIALMLWFGSPRCDQRVPVGQVADRRQLDAHIADALNQRENRSR
Sbjct: 481 GIRSWVFVAAPIVGLAGIALMLWFGSPRCDQRVPVGQVADRRQLDAHIADALNQRENRSR 540

Query: 549 RWW 552
           RWW
Sbjct: 541 RWW 543

[Close]

BLAST of Carg12632 vs. ExPASy TrEMBL
Match: A0A6J1EAQ0 (uncharacterized protein LOC111432303 isoform X4 OS=Cucurbita moschata OX=3662 GN=LOC111432303 PE=4 SV=1)

HSP 1 Score: 1003.0 bits (2592), Expect = 4.7e-289
Identity = 508/545 (93.21%), Postives = 512/545 (93.94%), Query Frame = 0


Query: 7   LEMDIDLQRILEEFLQSTAHVMDNNELVDEHGLNQSPTCACCERFLVLDNDVSGEPEAIG 66
           + MDIDLQRILEEFLQSTAHVMDNNELVDEHGLNQSPTCACCERFLVLDNDVSGEPEAIG
Sbjct: 8   MRMDIDLQRILEEFLQSTAHVMDNNELVDEHGLNQSPTCACCERFLVLDNDVSGEPEAIG 67

Query: 67  ICGDCKFLLLEDMEFREQDSYNRALPRGRRTRHGSSESPESRFSQEFSHMINLVRQSQSS 126
           ICGDCKFLLLEDMEF EQDSYNRA+PRGRRTRHGSSESPESRFSQEFSHMINL       
Sbjct: 68  ICGDCKFLLLEDMEFPEQDSYNRAMPRGRRTRHGSSESPESRFSQEFSHMINL------- 127

Query: 127 ISSYGDRYADGSNATYATQDSSLLMSPNQSRRWRRANSDSENDGLDSIDSMFRESGSNFS 186
                              DSSLLMSPNQSRRWRRANSDSENDGLDSIDSMFRESGSNFS
Sbjct: 128 -------------------DSSLLMSPNQSRRWRRANSDSENDGLDSIDSMFRESGSNFS 187

Query: 187 FGSYRHSYGDIDFVSYGTYGGDSDASMDGRSSLDTDVFVFPGDGFNDTDIDIDPMRAGVG 246
           FGSYRHS G IDFVSYGTYGGDSDASMDGRSSLDTDVFVFPGDGFNDTDIDIDPMRAGVG
Sbjct: 188 FGSYRHSSGGIDFVSYGTYGGDSDASMDGRSSLDTDVFVFPGDGFNDTDIDIDPMRAGVG 247

Query: 247 DWDSSDEEEDLGELTEADTEQDALEVESSQSRPPLQDFQVSSSSGRVNSGNWNEQLSSPE 306
           DWDSSDEEEDLGELTEADTEQDALEVESSQ+RPPLQDFQVSS+SGRVNSGNWNEQLSSPE
Sbjct: 248 DWDSSDEEEDLGELTEADTEQDALEVESSQARPPLQDFQVSSASGRVNSGNWNEQLSSPE 307

Query: 307 YELGRIRRNGRFYSNMNYSQSELLSFVENFGEYLDQQGFEQLLEQIAMTTSSRRGAPPAA 366
           YEL RIRRNGRFYSNMNYSQSELLSFVENFGEYLDQQGFEQLLEQIAMTTSSRRGAPPAA
Sbjct: 308 YELERIRRNGRFYSNMNYSQSELLSFVENFGEYLDQQGFEQLLEQIAMTTSSRRGAPPAA 367

Query: 367 VSSVKNLPLLVISKEHLKHDNISCAICKDFLLVGVEVNQLPCLHLYHPSCIMPWLRTRNS 426
           VSSVKNLPLLVISKEHLKHDNISCAICKDFLLVGV VNQLPCLHLYHPSCIMPWLRTRNS
Sbjct: 368 VSSVKNLPLLVISKEHLKHDNISCAICKDFLLVGVAVNQLPCLHLYHPSCIMPWLRTRNS 427

Query: 427 CPLCRYELPTDDRDYEEGKRSSIITAEVQGVGANLEFRTSQGEELNNIDSAVNNSNNSGR 486
           CPLCRYELPTDDRDYEEGKRSSI TAEVQGVGANLEFRTSQGEELNNIDSAVNNSNNSGR
Sbjct: 428 CPLCRYELPTDDRDYEEGKRSSINTAEVQGVGANLEFRTSQGEELNNIDSAVNNSNNSGR 487

Query: 487 HDGIRSWVFVAAPIVGLAGIALMLWFGSPRCDQRVPVGQVADRRQLDAHIADALNQRENR 546
           HDGIRSWVFVAAPIVGLAGIALMLWFGSPRCDQRVPVGQVADRRQLDAHIADALNQRENR
Sbjct: 488 HDGIRSWVFVAAPIVGLAGIALMLWFGSPRCDQRVPVGQVADRRQLDAHIADALNQRENR 526

Query: 547 SRRWW 552
           SRRWW
Sbjct: 548 SRRWW 526

[Close]

BLAST of Carg12632 vs. ExPASy TrEMBL
Match: A0A6J1EAA3 (E3 ubiquitin-protein ligase Praja-2-like isoform X5 OS=Cucurbita moschata OX=3662 GN=LOC111432303 PE=4 SV=1)

HSP 1 Score: 896.3 bits (2315), Expect = 6.2e-257
Identity = 453/462 (98.05%), Postives = 456/462 (98.70%), Query Frame = 0


Query: 90  ALPRGRRTRHGSSESPESRFSQEFSHMINLVRQSQSSISSYGDRYADGSNATYATQDSSL 149
           A+PRGRRTRHGSSESPESRFSQEFSHMINLVRQSQSSISSYGDRYADGSNATYA QDSSL
Sbjct: 2   AMPRGRRTRHGSSESPESRFSQEFSHMINLVRQSQSSISSYGDRYADGSNATYAMQDSSL 61

Query: 150 LMSPNQSRRWRRANSDSENDGLDSIDSMFRESGSNFSFGSYRHSYGDIDFVSYGTYGGDS 209
           LMSPNQSRRWRRANSDSENDGLDSIDSMFRESGSNFSFGSYRHS G IDFVSYGTYGGDS
Sbjct: 62  LMSPNQSRRWRRANSDSENDGLDSIDSMFRESGSNFSFGSYRHSSGGIDFVSYGTYGGDS 121

Query: 210 DASMDGRSSLDTDVFVFPGDGFNDTDIDIDPMRAGVGDWDSSDEEEDLGELTEADTEQDA 269
           DASMDGRSSLDTDVFVFPGDGFNDTDIDIDPMRAGVGDWDSSDEEEDLGELTEADTEQDA
Sbjct: 122 DASMDGRSSLDTDVFVFPGDGFNDTDIDIDPMRAGVGDWDSSDEEEDLGELTEADTEQDA 181

Query: 270 LEVESSQSRPPLQDFQVSSSSGRVNSGNWNEQLSSPEYELGRIRRNGRFYSNMNYSQSEL 329
           LEVESSQ+RPPLQDFQVSS+SGRVNSGNWNEQLSSPEYEL RIRRNGRFYSNMNYSQSEL
Sbjct: 182 LEVESSQARPPLQDFQVSSASGRVNSGNWNEQLSSPEYELERIRRNGRFYSNMNYSQSEL 241

Query: 330 LSFVENFGEYLDQQGFEQLLEQIAMTTSSRRGAPPAAVSSVKNLPLLVISKEHLKHDNIS 389
           LSFVENFGEYLDQQGFEQLLEQIAMTTSSRRGAPPAAVSSVKNLPLLVISKEHLKHDNIS
Sbjct: 242 LSFVENFGEYLDQQGFEQLLEQIAMTTSSRRGAPPAAVSSVKNLPLLVISKEHLKHDNIS 301

Query: 390 CAICKDFLLVGVEVNQLPCLHLYHPSCIMPWLRTRNSCPLCRYELPTDDRDYEEGKRSSI 449
           CAICKDFLLVGV VNQLPCLHLYHPSCIMPWLRTRNSCPLCRYELPTDDRDYEEGKRSSI
Sbjct: 302 CAICKDFLLVGVAVNQLPCLHLYHPSCIMPWLRTRNSCPLCRYELPTDDRDYEEGKRSSI 361

Query: 450 ITAEVQGVGANLEFRTSQGEELNNIDSAVNNSNNSGRHDGIRSWVFVAAPIVGLAGIALM 509
            TAEVQGVGANLEFRTSQGEELNNIDSAVNNSNNSGRHDGIRSWVFVAAPIVGLAGIALM
Sbjct: 362 NTAEVQGVGANLEFRTSQGEELNNIDSAVNNSNNSGRHDGIRSWVFVAAPIVGLAGIALM 421

Query: 510 LWFGSPRCDQRVPVGQVADRRQLDAHIADALNQRENRSRRWW 552
           LWFGSPRCDQRVPVGQVADRRQLDAHIADALNQRENRSRRWW
Sbjct: 422 LWFGSPRCDQRVPVGQVADRRQLDAHIADALNQRENRSRRWW 463

[Close]

BLAST of Carg12632 vs. TAIR 10
Match: AT5G01980.1 (RING/U-box superfamily protein )

HSP 1 Score: 277.3 bits (708), Expect = 2.6e-74
Identity = 215/551 (39.02%), Postives = 288/551 (52.27%), Query Frame = 0


Query: 23  STAHVMDNNELVDEHGLNQSPTCAC--CERFLVLDNDVSGEPEAIGICGDCKFLLLEDME 82
           S  H MD +        N  P+ AC  C R +      S + E   +C DCKFLLLED  
Sbjct: 7   SNGHPMDISS-------NSIPSSACNLCGRVV---QSASDDLEIFSLCVDCKFLLLEDFG 66

Query: 83  ------FREQDSYNRALPRGRR-TRHGSSES--PESRFSQEFSHMINLVRQSQSSISSYG 142
                  R Q    R + R RR TRH SSES       SQ+F+H+I++ RQS S++ +  
Sbjct: 67  TPAPPLARRQTIRRRRMRRRRRTTRHDSSESVGVGDLSSQQFTHLISIARQSLSTVQASE 126

Query: 143 DRYADGSNATYATQDSSLLMSPNQSRRWRRANSDSENDGLDSIDSMFRESGSNFSFGSYR 202
           D   D   +++ T        P+ S RW R  S+SE+D  D+    F E+ SN SF  YR
Sbjct: 127 DLRDDLRTSSHTT--------PSGSTRW-RLFSESESDDFDN----FGETESNASFSLYR 186

Query: 203 HSYGDIDFVSYGTYGGDSDASMDGRSSLDTDVFVFPGDGFN-DTDIDIDPMRAGVGDWDS 262
             + D D +S+  YGG+SDAS D  +    D+FV P D  + D D DIDPMRAG+  W+S
Sbjct: 187 FPHADNDTISFSAYGGESDASTDRHA----DIFVQPDDRSDIDFDTDIDPMRAGLNQWNS 246

Query: 263 SDE----EEDLGELTEADTEQDALEVESSQSRPPLQDFQVSSSSGRVNSGNWNEQLSSPE 322
            +E    EE  G    A T         S+S   +  F                   SPE
Sbjct: 247 DEEDREWEEGAGPSGVAGTRYRNYLASPSESYSSMTRF------------------DSPE 306

Query: 323 YELG---RIRRNGRFYSNMNYSQSELLSF---VENFGEYLDQQGFEQLLEQIAMTTSSRR 382
            E     RI       S   ++  E L F     N G+YLD++GF++LLEQ+A + +SRR
Sbjct: 307 LERSFRQRIIERRHSLSRNIFTGLEDLDFSPYAANVGDYLDERGFDELLEQLAESDNSRR 366

Query: 383 GAPPAAVSSVKNLPLLVISKEHLKHDNISCAICKDFLLVGVEVNQLPCLHLYHPSCIMPW 442
           GAPPA+VS V+NLP ++I++EH+    + CAICK+   +  E  QLPCLHLYH  CI+PW
Sbjct: 367 GAPPASVSCVRNLPRVIIAEEHVM-KGLVCAICKELFSLRNETTQLPCLHLYHAHCIVPW 426

Query: 443 LRTRNSCPLCRYELPTDDRDYEEGKRSSIITAEVQGVGANLEFRTSQGEELNNIDSAVNN 502
           L  RNSCPLCRYELPTDD+DYEEGKR+ +   +V    ++ +  T  GEE   ++   + 
Sbjct: 427 LSARNSCPLCRYELPTDDKDYEEGKRNVL---DVSEDSSSSDDGTESGEE-EYVERGESE 486

Query: 503 SNNSGRHDGIRSWVFV-AAPIVGLAGIALMLWFGSPRCDQRVPVGQVADRRQLDAHIADA 551
           S  S    G   W+F+ AAP+V L G+ L +W  SP             RR     IA +
Sbjct: 487 SGVSRVSRG--RWLFLAAAPVVSLVGVVLAMWLSSPH------------RR----GIAIS 489

[Close]

BLAST of Carg12632 vs. TAIR 10
Match: AT3G19950.1 (RING/U-box superfamily protein )

HSP 1 Score: 125.9 bits (315), Expect = 9.7e-29
Identity = 54/122 (44.26%), Postives = 79/122 (64.75%), Query Frame = 0


Query: 335 NFGEYLDQQGFEQLLEQIAMTTSSRRGAPPAAVSSVKNLPLLVISKEHLKHDNISCAICK 394
           NFG+Y    G EQL++Q+A    +R G PPA+ S++  LP + ++K+ LK +   CA+C 
Sbjct: 161 NFGDYFFGPGLEQLIQQLAENDPNRYGTPPASKSAIDALPTVKVTKDMLKSEMNQCAVCM 220

Query: 395 DFLLVGVEVNQLPCLHLYHPSCIMPWLRTRNSCPLCRYELPTDDRDYEEGKRSSIITAEV 454
           D    G +V Q+PC H++H  C++PWL   NSCP+CR+ELPTDD DYE   + S  + + 
Sbjct: 221 DEFEDGSDVKQMPCKHVFHQDCLLPWLELHNSCPVCRFELPTDDPDYENRSQGSQGSGDG 280

Query: 455 QG 457
           QG
Sbjct: 281 QG 282

[Close]

BLAST of Carg12632 vs. TAIR 10
Match: AT3G02340.1 (RING/U-box superfamily protein )

HSP 1 Score: 113.2 bits (282), Expect = 6.5e-25
Identity = 56/121 (46.28%), Postives = 76/121 (62.81%), Query Frame = 0


Query: 327 SELLSFVENFGEYLDQQGFEQLLEQIAMTTSSRRGAPPAAVSSVKNLPLLVISKEHLKHD 386
           S L  F EN   + D    + +L Q+    +  RG PPAA S +++LP++ ++ E L   
Sbjct: 275 SGLDEFDENHSGHYDA---DAILGQMFDDETGIRGNPPAAKSVIQDLPVVELAVEELDKG 334

Query: 387 NISCAICKDFLLVGVEVNQLPCLHLYHPSCIMPWLRTRNSCPLCRYELPTDDRDYEEGKR 446
           N  CA+CKD +LV  +V +LPC H YH  CI+PWL  RN+CP+CRYELPTDD +YE  K 
Sbjct: 335 NNVCAVCKDEMLVEEKVRRLPCSHFYHGECIIPWLGIRNTCPVCRYELPTDDLEYERHKS 392

Query: 447 S 448
           S
Sbjct: 395 S 392

[Close]

BLAST of Carg12632 vs. TAIR 10
Match: AT5G64920.1 (COP1-interacting protein 8 )

HSP 1 Score: 106.7 bits (265), Expect = 6.1e-23
Identity = 83/239 (34.73%), Postives = 116/239 (48.54%), Query Frame = 0


Query: 218 SLDTDVFVFPGDGFNDTDIDIDPMRAGVGDWDSSDEEEDLGELTEADTEQDALEVESSQS 277
           S + D F    +  N+ D D D      GD +  DEEE+L    E D E D       ++
Sbjct: 101 SYEDDFFRLELNSRNEIDDDEDEDEDD-GDEEEEDEEENLTVNDEEDEEDDL----RRRN 160

Query: 278 RPPLQDFQVSSSSGRVNSGNWNEQLSSPEYELGRIRRNGRFYSNMNYSQSELLSFVENFG 337
           R PL   Q  S +GR    +W E L   E      R     Y+              N  
Sbjct: 161 RFPLTTTQ--SRTGRNRILDWAEILMGIEDNSIEFRMESDRYAG-------------NPA 220

Query: 338 EYLDQ-QGFEQLLEQIAMTT----SSRRGAPPAAVSSVKNLPLLVISKEHLKHDNISCAI 397
           +Y+D   G+E LL+ +A         RRGAPPAA S+++ L    +S    +   + CA+
Sbjct: 221 DYIDDAAGYEALLQNLAEGDGGGGGGRRGAPPAAKSAIEALETFEVSSSEGEMVMV-CAV 280

Query: 398 CKDFLLVGVEVNQLPCLHLYHPSCIMPWLRTRNSCPLCRYELPTDDRDYEEGKRSSIIT 452
           CKD +++G    +LPC H YH  CI+PWL TRNSCP+CR++L TDD +YEE ++    T
Sbjct: 281 CKDGMVMGETGKKLPCGHCYHGDCIVPWLGTRNSCPVCRFQLETDDAEYEEERKKRTST 318

[Close]

BLAST of Carg12632 vs. TAIR 10
Match: AT5G08139.1 (RING/U-box superfamily protein )

HSP 1 Score: 102.8 bits (255), Expect = 8.8e-22
Identity = 91/303 (30.03%), Postives = 141/303 (46.53%), Query Frame = 0


Query: 165 DSENDGLDSIDSMFRESGSNF--SFGSYRHSYGDIDFVSYGTYGGDSDASMDGRSSL--- 224
           D  ND  +  D  F    ++F   F     S  DI  ++  + G D D  ++    L   
Sbjct: 72  DVSNDFDEPDDDDFFVGRTDFGLEFRDIASSGNDIRLITVES-GSDDDDGVENERELWGI 131

Query: 225 ---DTDVFVFPGDGFNDTDIDID-PMRAGVGDWDSSDEEEDLGELTEADTEQ-------- 284
              + DV+V   D + D D+ +  P+      WDS   E+      E D E+        
Sbjct: 132 DLNEEDVYVNDDDEYEDDDVSVTIPL-----CWDSLQLEDREVTADEFDWEEVGGGGGGG 191

Query: 285 --DALEVESSQSRPPLQDFQVSSSSGRVN-SGNWNEQLSSPEYELG-RIRRNGRFYSNMN 344
             D  E+ S  ++  + D  + S+S  ++  G    + +     LG  +  N     N +
Sbjct: 192 VDDEREIRSGFAQIDMNDESLISASPIISLEGLVTRERAEGSGNLGWEVLLNHTLEINFD 251

Query: 345 YSQSELLSFVENFGEYLDQ-QGFEQLLEQIAMTTSSRRGAPPAAVSSVKNLPLLVISKEH 404
               EL       G++ D  Q ++ L EQ A    S  G PP + S + NLP++++  E+
Sbjct: 252 VDNRELYI----GGDHDDYVQDYDMLFEQFADAEVSVIGLPPTSKSFLNNLPVVLLEGEN 311

Query: 405 LKHDNISCAICKDFLLVGVEVNQLPCLHLYHPSCIMPWLRTRNSCPLCRYELPTDDRDYE 446
                + CA+CKD + +G +  QLPC H YH  CI+PWL+ RN+CP+CRYELPTDD +YE
Sbjct: 312 DDDGGLVCAVCKDEMNIGNKAVQLPCNHKYHSECIVPWLKVRNTCPVCRYELPTDDAEYE 364

The following BLAST results are available for this feature:

BLAST of Carg12632 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7027514.1	0.0e+00	100.00	E3 ubiquitin-protein ligase RING1 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022924889.1	0.0e+00	98.19	E3 ubiquitin-protein ligase Praja-2-like isoform X2 [Cucurbita moschata]	[more]
XP_022924884.1	1.0e-306	97.80	E3 ubiquitin-protein ligase Praja-2-like isoform X1 [Cucurbita moschata] >XP_022...	[more]
XP_022924890.1	1.3e-306	98.16	E3 ubiquitin-protein ligase Praja-2-like isoform X3 [Cucurbita moschata]	[more]
XP_023517907.1	5.3e-303	96.55	E3 ubiquitin-protein ligase Praja-2-like isoform X2 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg12632 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LPN7	1.4e-27	44.26	E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19...	[more]
P0CH30	2.3e-27	47.37	E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum OX=3635 GN=RING1 PE=1 SV...	[more]
O22197	5.0e-22	46.08	Probable E3 ubiquitin-protein ligase RHC1A OS=Arabidopsis thaliana OX=3702 GN=RH...	[more]
Q9SPL2	8.6e-22	34.73	E3 ubiquitin-protein ligase CIP8 OS=Arabidopsis thaliana OX=3702 GN=CIP8 PE=1 SV...	[more]
Q9SNB6	3.3e-21	34.69	E3 ubiquitin-protein ligase RDUF1 OS=Arabidopsis thaliana OX=3702 GN=RDUF1 PE=1 ...	[more]

BLAST of Carg12632 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EAH4	0.0e+00	98.19	E3 ubiquitin-protein ligase Praja-2-like isoform X2 OS=Cucurbita moschata OX=366...	[more]
A0A6J1EAH0	5.0e-307	97.80	E3 ubiquitin-protein ligase Praja-2-like isoform X1 OS=Cucurbita moschata OX=366...	[more]
A0A6J1EGC2	6.5e-307	98.16	E3 ubiquitin-protein ligase Praja-2-like isoform X3 OS=Cucurbita moschata OX=366...	[more]
A0A6J1EAQ0	4.7e-289	93.21	uncharacterized protein LOC111432303 isoform X4 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1EAA3	6.2e-257	98.05	E3 ubiquitin-protein ligase Praja-2-like isoform X5 OS=Cucurbita moschata OX=366...	[more]

BLAST of Carg12632 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G01980.1	2.6e-74	39.02	RING/U-box superfamily protein	[more]
AT3G19950.1	9.7e-29	44.26	RING/U-box superfamily protein	[more]
AT3G02340.1	6.5e-25	46.28	RING/U-box superfamily protein	[more]
AT5G64920.1	6.1e-23	34.73	COP1-interacting protein 8	[more]
AT5G08139.1	8.8e-22	30.03	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 390..430 e-value: 1.2E-5 score: 34.7
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 389..431 e-value: 3.8E-10 score: 40.0
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 390..431 score: 11.781134
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 351..437 e-value: 2.5E-17 score: 64.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 249..269
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 87..109
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 145..168
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 87..105
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 145..159
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 235..300
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 270..300
None	No IPR available	PANTHER	PTHR15710:SF75	E3 UBIQUITIN-PROTEIN LIGASE RING1	coord: 327..481
None	No IPR available	PANTHER	PTHR15710	E3 UBIQUITIN-PROTEIN LIGASE PRAJA	coord: 327..481
None	No IPR available	CDD	cd16667	RING-H2_RNF126_like	coord: 389..431 e-value: 7.47322E-21 score: 83.5212
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 378..438

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg12632-RA	Carg12632-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006511	ubiquitin-dependent protein catabolic process
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0061630	ubiquitin protein ligase activity