Carg12629 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg12629
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: cultured cell;
Location	Carg_Chr07: 6967854 .. 6973993 (-)
RNA-Seq Expression	Carg12629
Synteny	Carg12629

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACAGAGAAGGAGAGGGAGCGGCGGCAGCGGCAGCGGCAGCGGCAGCGGCTGCGTCGTCTTCTCAGGCCAACAGATCTGGTAGGAGGGTGGATCCGTTGCTCGTAACTTGCAGGTTTTTCAGTATTGTAACAACTCTCACTGCTATTCTCTGCATTGTTTCCAATGTCATCTCTGCGATTCGATCCTTTAAGAACAACTCCGATGTAATCTCTCTGTTTCTGTTGCGTCTTTGTTCGGTATTTTTTTGAATCTAATGCTGTATCACGCGGTTGTTTGAAATTTTGGCAGATATTCGATGGTATATTTCGTTGTTATGCAGTTGTGATCTCATTCTTCGTGGTTATTGCTGAGACGGAATGGGAGTTTATTCTTAAGAACTGGCAGGTTTTTTGCGTCTGAACCCTAACTTCTCAATTTCTGAAGTGATTTTGGTTTTCGCTCTATTTGTTTCCCACTTCAATCTTTGAATCTTTCATCTATTTCCTTTTGCGGCTTTTAGGTACAATAAATGTATGGCTGTTTTAGTGGTGTGGTCTGGGTACAAAAGTTGGAGCGCGAAAGCCAGCCATAGTAGCTTGTCTTGGAATATGATTATTCAAAATAGCTCCTAGTAATTTGATGGTTGAAGCTAAGAATTACAGTATGCTTTGATTTTAATAGAAATGGATGGGTTCTAGGATTATCTCTTGATGTTGTATACCTTGCCTTGTTGAAAATTAATCTCATTTTATTCGACTAATCATTTAACTATGTGGACATTGCCTCTTTCTCATTTGTTGCGTATGGTTATTGTGAGATCCCACATCGGTTGGGGAGGAGAATGAAACATTCTTTATAATGGTGTGGAAACCTCTTCCTAGCAGATGAAACTTGAAGGGGAAGCCTGAAAGGGAAAGCCTAAAGAGGACAATATCTGCTAGCGGTGGGCTTGAGCTGTTACAAATGATATCAGAGCTAGACACTGGGTGATGTGCTAGCGAGGAGGCTGAGTCCCGAAGGGGAGTTGACACAAGCCAGTATGCTAGTAAGGTCGCTGGCTCCAACAGGAGGTGGATTGGGGGGTCCCACATCGATTGGAGAAGGGAACAAGTGCCAGCGAGGATGCTGGGCCCTGTAGGGGTGGATTATGAGATCCCACATTAGTTGTGGAGGGAGGCGTGGAAACCTCTCCCTAGTAGACGTGTTTTAAAAACTTTGAGGGGAAACCCAAAAGGAAAAGCCCCAAGCTGGGCTTGGGCTGTTTTAGTTAATATAAATATTAAAACTTAAATGATTTATTTATTTGTTGCTTATACTGTAGAAAAATTTTACCTCCCTTTCATTCTCTGGGATGTCACTATTGGAGAATGTACCCAAGTGGAACTATATATTCATTCGTATCAGACTATTACCTGTCTAAATTTTCTGGGATGTCACGAAAAAGGCCTTGGAAGTATCATAGGTTGCCACAATATTCCTTGAAGCTCAAAGATGCATTTTATGCCTTATTCCTTCCTAAGGTTTCTTAAGTTTTTTCCCTTTTGAGGATTTGCCTACGGCATCATTTAATTCAGTTGGGTCTGTGCATTGCAGGTATTGGAATACTGGGCTGGCGGGGCATGTTGCAAATCTTGTAAGCTTTATTTTTAGGAGTATTTGCAACCTTTTCCTTTTTACTTTCTGACTTGTTCCTATATGCCATGTGCCTCTATGTGAAAATCTTGCTTATCAATAAGCTCCATGCACCCAGTCAATTTTGCAACTGAATTGTTGGTTTTTTGGAGAAACATGTAATGAAATATGCAACATCTGGTGTTGGTTAGATGCCTTCTTGTTAATTCAATGATCCTATGAACTTTCCTTAGGATGTTAGACTGGGACTAGTTTAAATTTATTAGAATAGGAGATTTTTCCATGCAGTAGAGATATATACCTACCGTGATTATAACTATAAAAAACTTTCACATTGATCAAGAAGATTAGATTCCACATGAGATGAGATACATGAAATTCATGGATTCCCCATATTGTGAGCATTCAATTTGTTTTAAGTTGCAATTGTCTTTGTGCAGTGTTGCAGTAATGACAAGAGCTTTCCCTGTGTATTCTGTAGAGAAGAGAGAGCTTATTCTTCTCCAAGATGCTGCAAGTTATCTCCTCCTTGCTTGTGGTGCAGTCTATGTTGTAACGGTAAGCCTTGTGAACGATACCTTGTTTCCTAATTTTATCCCTGGGGGCTTGTGAGAGAGGTTATATATGTTTCTGCTCTTTGCTTGTTCCATGATCTGTGTTGTTTTGGTAACCTGAATGAAAACCTACATTATTAATGCTTGAGTGGGATATTTAAATTTTTTTTTCTTTCTTTGATGTATTCCCCTGCACACGTATATTTCTTTTCATTGTTGAATTGACAGCAAGAGAGCACAACTTTTAAAAAAAAAACAAAAAAACAAGAAACCGATTTTTTTTCATTGATTCGAGAAGACTAATGCTCAAGAGATACAAACTCCACAAGGGAGTGAAAAGGAACAAGAAAAAAAAAAAAAAAAAAAAAAAAAAGAACAGAAGGAGATACAATGTGCTGGAAAGAACTAGCTCGCATGACTTGGAGGCTGGAAACAACCTTGAAAAACCCAAAACAAAGGTTAGGGAAGAAGCCTTAAAACCAAATCAAGATAGGAACTGTCAACAAAACACATAGGAACCTTTGCAAACCGCGATCAACCGAGAACCAAGAGAACAGACACTGTAACAAAAGCTGAAAACACCAATCTGGCACCCAAACTGGGCTGAAAAGCTTGAAAGAGAACCAAACCACTAAACCTCAGAGAAGATAAAACAGAGCTTGGCAAAGCTAAACACTGACATGGCTTCCTTCATTAACCAATGGAAGAATTTCACGAAACTCAAGGCCATAAGCTTCAATAAGTGAACCGAATTTGGCCTGCAAGGTGGGTGGAATAGGAGGAGGAGTCTTTTTGTCACAATCCAGAAATAATATGTCAAAAGCTTCAAAATAACAATCTTCATGCCACTCTCCTTGCTGAAATCCACAGGCTAAATGAATGATTTCACACTTCTCAAGCTTACCACGGAGTTAGCATCAATGGCGCCACCATGTGAAGGAGAAGAAAAATGAAGCGAGTTGGGGTCCTTTGTCCAGTGAATACCTCCTATTGTTAATCCTACATCCAGATCCATGTCATCAAAGGTGGTAAGGTGACTTGCTGATCAAAGGGCACTAAGAGCCTTGTACAACTTTCTTCAATTACATCAGAAGCAAAGAATCGGCCTCTTTTCTTACGTGTATAAGACAAAGGATAGGCTGGAATAAAACCCTTCACCTCTTTAACACTCAAAAGCCATAAGGGAAGATTCAAAGGAGGCTCAGAAATCTCCATAGGCGCCTGTTTGAGTAAATTTTCAAAATCAACCTCACCTTCCAATTGATGGTTTGCGAATAATGAGGAATTAAATCCCTCTTGAAGTTCCTGGGGAGAAGAAATAGACTTCTTGGAGACTTGAAACCTCTTGAATGAACCACAAGGTGGATGGAAAGGTGGCTCATGCGGACCATGGTCTTTTTTTCCTTGCATAGAATTTCAAATAAGCTGCAATAAAATTATCTTTTACTTCGTTTATGCTTAAAGGTATTGGAGAACCAAAATTCAAGTCACTCTTGGTCTTCTTCTGCTGCTGTCTTCAAAACGGGGGATTCCGAAAATTTATTAAATGGGACAGGAACAATAATAGTATTAACCAGCTTCAAAATGCACAAGGGGGAGAAGGTACCTGATCCTTTGAAATTAAAGGCACTTGCTCATGCAGATTAGGAGCAATAATTAAAGGTTTTTACTATTCACATCCTGTATTAGTAAAGCCTCAACTTTTATACTTGTGTTTCACTTAGTTTCAATCCAACAATTATATGATTTCTTCATGCACTTGCTCCCTAGCAAGTTAGCCCAGCCAAAATCGCATTACCAGTGGTGCAATGAGTCTTTCATGAACTTTTTTCATATTTGTGCGTTAATGGTTTTTATTGATAATACAAGGTTGGAGAAAAACATTAAATACATCAAGAAACAGAGTGTCGGTAGTCGGTAGACCACAAGGAAAAAGGAATCAAACAGTTGAAAGTTGACAATATTTTCTAGGGTTTGCTTACGTCAGTTTTTCATGTATGTCTTTAGAGGTTCATGATATGGATGTCATTTATTTGGTTCTCGTGGATTTGTCTCAAAATCTTGATATCCATGATACTTTCTGTAATTGCCTTTCTTCATCCCAAGTATGTCTTTGACAGCACTGAATTTTGTTTTTAGTGTGTGTTAGACTAATTACTGGAGGTGCAAGTTAATTCATGAACCTTCTGTGCACCAAGATGCTAAGTCATATGTAAATATGTGCTGGGCTATCATACATCAGTGAACTAAATCATCATCCGTTTGAAAGTAATATGAACCAAGGCATTAATCATGCAATATTAACTTCAAGAAAGATGTGAAGAAAATGTTGTTTAAATTATCACAAGATGTTACAATTCATGCCACATTAAAAAATAATGAAACTTCATTTATTCACAAAATTTGGGTCTATGATAATTTAGAGTTATGGTGTTTCTTTAATGTATTTTAAAGCTACATAGTGGCTAATTAGGGTCATAAAGTATACATAGTGGCTAATTATGGTCATAAAATATGAAAGTTACAACTCTTGGAACACCTTATGGAAAGTTAAGGGTTTTAATTTTGATGCTATATAAAGTCATGTATGTTGTCGAAGACTTGGAAAATGGAGTAAAAAGAACCTTTGTGTTTTCCTTTAGCCAATAGCTAAGTTTATTTGCAATTCTATGTAGTTTAGGTGGCATGTTTAGAATTATTCAAGCTTGACATGATCAATCTTGCTTGTGGAGTGATTTGAATCTCAAACAAGTGTTCTTGCCTTGAGATATTCGATCAACAGAGTAATCCGAATCTTACTTCCCTTCCAGTGATTCCTTATCATTTGGTATCAGAGTTTTTCCTTAGATTGATTTCTTATAAAAAAGTTTGCCTATGGTGTATGTGAATCTAATAAAAAAGTTTGCCTATGGTGTATAAAACATGTGATTGGATCTTTGTTTGCATGGATAACGCTTAAATGATTCTGGTTTTTCCTACAAATTTCAAGGGAATAATGTGCATTGGGTTTCTCAAACGTGCTCGTGAAGAGAAAGAGACCGCAAAGGACAGGATTGTCAATGATCTTCAGGTAAGCTCTTTCACTGGATAGTTCTATAACTCATTGGGGAGCACGAATAGATACTAATAATGTTTTGTTGCCATTTTTTTAAATGAAAACATTAAAGCATATATATGTCATAATATATTGTTTGAGATTATAAGCAACTTCTCCAATTTCAGTTGATTACCATTAGCTGTGGAGTTTATTTTTCTCTGGTTTATTGGCATTAGTCACCGTGTGATGTCCCACGTTGATTGAGGAGGAGAACAAACCACCATTTATAAGAGTGTGGAAACCTTCTCCTAGCAGACGCGTTTTAAAACCTTGAGGGGAAGCCCGAAGGGGAAAGCCCAAAAAAGAGAATATCTGCTAGCAGTGGATTTAGCCAATTGTCTTGATCGTGGGATATCATTGAGAAATAGGAATCCGTGTTATCAAAGGATTTCCTGCGATTATTTCTCGTACGGAATGGATCTGGACCGTTAGATAGAGAGTTTTAGTTTACTGGAAATTTGAATTTCAGCACAAACAGAGCATCGTTTGGTGACAATTTTGTTTCCAAAATATCTGTTTTTAAAAATTAAGCTCGTTAATGTCCATAATTTTCTTTCATCTTTTTAACGCCGCACTACTTTCTTTTGTTCTTAAAATTTGACCCAGAGTACTGTTGTTAGTCTTTTCTCATTATCATAGGGCTCCCCTCTGTGTGATTTACATGAACCAAGAATTCTTAGTTTATTATTCAACCATTTTTACACACACAATTTGATCTTGAGGAAGCCCTGAATTTGTTGTAGGATTTGGAAAGTCAAAAACAAGAACTTGAACGGTTGCTCATTTCAGAAACTGTTTGAAACGATATAAAGACATTCCCATGCAACAGAACATAATTGCACCAGATTCTCGCTTCACTGCTGGGATTGTATGA

mRNA sequence

ATGGACAGAGAAGGAGAGGGAGCGGCGGCAGCGGCAGCGGCAGCGGCAGCGGCTGCGTCGTCTTCTCAGGCCAACAGATCTGGTAGGAGGGTGGATCCGTTGCTCGTAACTTGCAGGTTTTTCAGTATTGTAACAACTCTCACTGCTATTCTCTGCATTGTTTCCAATGTCATCTCTGCGATTCGATCCTTTAAGAACAACTCCGATATATTCGATGGTATATTTCGTTGTTATGCAGTTGTGATCTCATTCTTCGTGGTTATTGCTGAGACGGAATGGGAGTTTATTCTTAAGAACTGGCAGGTATTGGAATACTGGGCTGGCGGGGCATGTTGCAAATCTTTAATGACAAGAGCTTTCCCTGTGTATTCTGTAGAGAAGAGAGAGCTTATTCTTCTCCAAGATGCTGCAAGTTATCTCCTCCTTGCTTGTGGTGCAGTCTATGTTGTAACGGGAATAATGTGCATTGGGTTTCTCAAACGTGCTCGTGAAGAGAAAGAGACCGCAAAGGACAGGATTGTCAATGATCTTCAGAACATAATTGCACCAGATTCTCGCTTCACTGCTGGGATTGTATGA

Coding sequence (CDS)

ATGGACAGAGAAGGAGAGGGAGCGGCGGCAGCGGCAGCGGCAGCGGCAGCGGCTGCGTCGTCTTCTCAGGCCAACAGATCTGGTAGGAGGGTGGATCCGTTGCTCGTAACTTGCAGGTTTTTCAGTATTGTAACAACTCTCACTGCTATTCTCTGCATTGTTTCCAATGTCATCTCTGCGATTCGATCCTTTAAGAACAACTCCGATATATTCGATGGTATATTTCGTTGTTATGCAGTTGTGATCTCATTCTTCGTGGTTATTGCTGAGACGGAATGGGAGTTTATTCTTAAGAACTGGCAGGTATTGGAATACTGGGCTGGCGGGGCATGTTGCAAATCTTTAATGACAAGAGCTTTCCCTGTGTATTCTGTAGAGAAGAGAGAGCTTATTCTTCTCCAAGATGCTGCAAGTTATCTCCTCCTTGCTTGTGGTGCAGTCTATGTTGTAACGGGAATAATGTGCATTGGGTTTCTCAAACGTGCTCGTGAAGAGAAAGAGACCGCAAAGGACAGGATTGTCAATGATCTTCAGAACATAATTGCACCAGATTCTCGCTTCACTGCTGGGATTGTATGA

Protein sequence

MDREGEGAAAAAAAAAAAASSSQANRSGRRVDPLLVTCRFFSIVTTLTAILCIVSNVISAIRSFKNNSDIFDGIFRCYAVVISFFVVIAETEWEFILKNWQVLEYWAGGACCKSLMTRAFPVYSVEKRELILLQDAASYLLLACGAVYVVTGIMCIGFLKRAREEKETAKDRIVNDLQNIIAPDSRFTAGIV

Homology

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BLAST of Carg12629 vs. NCBI nr
Match: KAG7027511.1 (hypothetical protein SDJN02_11525, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 364.0 bits (933), Expect = 7.9e-97
Identity = 192/192 (100.00%), Postives = 192/192 (100.00%), Query Frame = 0


Query: 1   MDREGEGAAAAAAAAAAAASSSQANRSGRRVDPLLVTCRFFSIVTTLTAILCIVSNVISA 60
           MDREGEGAAAAAAAAAAAASSSQANRSGRRVDPLLVTCRFFSIVTTLTAILCIVSNVISA
Sbjct: 1   MDREGEGAAAAAAAAAAAASSSQANRSGRRVDPLLVTCRFFSIVTTLTAILCIVSNVISA 60

Query: 61  IRSFKNNSDIFDGIFRCYAVVISFFVVIAETEWEFILKNWQVLEYWAGGACCKSLMTRAF 120
           IRSFKNNSDIFDGIFRCYAVVISFFVVIAETEWEFILKNWQVLEYWAGGACCKSLMTRAF
Sbjct: 61  IRSFKNNSDIFDGIFRCYAVVISFFVVIAETEWEFILKNWQVLEYWAGGACCKSLMTRAF 120

Query: 121 PVYSVEKRELILLQDAASYLLLACGAVYVVTGIMCIGFLKRAREEKETAKDRIVNDLQNI 180
           PVYSVEKRELILLQDAASYLLLACGAVYVVTGIMCIGFLKRAREEKETAKDRIVNDLQNI
Sbjct: 121 PVYSVEKRELILLQDAASYLLLACGAVYVVTGIMCIGFLKRAREEKETAKDRIVNDLQNI 180

Query: 181 IAPDSRFTAGIV 193
           IAPDSRFTAGIV
Sbjct: 181 IAPDSRFTAGIV 192

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BLAST of Carg12629 vs. NCBI nr
Match: XP_022922529.1 (uncharacterized protein LOC111430498 [Cucurbita moschata] >KAG6576880.1 hypothetical protein SDJN03_24454, partial [Cucurbita argyrosperma subsp. sororia] >KAG7014903.1 hypothetical protein SDJN02_22534 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 278.5 bits (711), Expect = 4.4e-71
Identity = 146/183 (79.78%), Postives = 163/183 (89.07%), Query Frame = 0


Query: 1   MDREGEGAAAAAAAAAAAASSSQANRSGRRVDPLLVTCRFFSIVTTLTAILCIVSNVISA 60
           M+R GEGAAA   AAA AASSSQ +R GRRVDPLLVTCRFFS+VT LTAILCIVSNVI+A
Sbjct: 1   MERGGEGAAAGTTAAATAASSSQTSRPGRRVDPLLVTCRFFSVVTALTAILCIVSNVIAA 60

Query: 61  IRSFKNNSDIFDGIFRCYAVVISFFVVIAETEWEFILKNWQVLEYWAGGACCK---SLMT 120
           IRSFKN SDIFDGIFRCYAVVI+FFVV+AETEWEFILKNW+VLEYWAG    +   ++MT
Sbjct: 61  IRSFKNKSDIFDGIFRCYAVVIAFFVVLAETEWEFILKNWKVLEYWAGRGMLQIFVAVMT 120

Query: 121 RAFPVYSVEKRELILLQDAASYLLLACGAVYVVTGIMCIGFLKRAREEKETAKDRIVNDL 180
           RAFP YSVE+RE ILLQ+AASYLLLACGAVYVV+GI+CIGFLKRAREEKET+KDR+V DL
Sbjct: 121 RAFPAYSVEQREFILLQEAASYLLLACGAVYVVSGILCIGFLKRAREEKETSKDRVVKDL 180

[Close]

BLAST of Carg12629 vs. NCBI nr
Match: XP_022984240.1 (uncharacterized protein LOC111482612 [Cucurbita maxima] >XP_022984241.1 uncharacterized protein LOC111482612 [Cucurbita maxima])

HSP 1 Score: 276.9 bits (707), Expect = 1.3e-70
Identity = 146/183 (79.78%), Postives = 162/183 (88.52%), Query Frame = 0


Query: 1   MDREGEGAAAAAAAAAAAASSSQANRSGRRVDPLLVTCRFFSIVTTLTAILCIVSNVISA 60
           M+R GEGAAA   AAA AASSSQ  R GRRVDPLLVTCRFFS+VT LTAILCIVSNVI+A
Sbjct: 1   MERGGEGAAAGTTAAATAASSSQTIRPGRRVDPLLVTCRFFSVVTALTAILCIVSNVIAA 60

Query: 61  IRSFKNNSDIFDGIFRCYAVVISFFVVIAETEWEFILKNWQVLEYWAGGACCK---SLMT 120
           IRSFKN SDIFDGIFRCYAVVI+FFVV+AETEWEFILKNW+VLEYWAG    +   ++MT
Sbjct: 61  IRSFKNKSDIFDGIFRCYAVVIAFFVVLAETEWEFILKNWKVLEYWAGRGMLQIFVAVMT 120

Query: 121 RAFPVYSVEKRELILLQDAASYLLLACGAVYVVTGIMCIGFLKRAREEKETAKDRIVNDL 180
           RAFP YSVE+RE ILLQ+AASYLLLACGAVYVV+GI+CIGFLKRAREEKET+KDR+V DL
Sbjct: 121 RAFPAYSVEQREFILLQEAASYLLLACGAVYVVSGILCIGFLKRAREEKETSKDRVVKDL 180

[Close]

BLAST of Carg12629 vs. NCBI nr
Match: XP_023552582.1 (uncharacterized protein LOC111810200 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 276.6 bits (706), Expect = 1.7e-70
Identity = 144/183 (78.69%), Postives = 162/183 (88.52%), Query Frame = 0


Query: 1   MDREGEGAAAAAAAAAAAASSSQANRSGRRVDPLLVTCRFFSIVTTLTAILCIVSNVISA 60
           M+R GEGAA    AAA AASSSQ +R GRRVDPLLVTCRFFS+VT LTAILCIVSNV++A
Sbjct: 1   MERGGEGAATGTTAAATAASSSQTSRPGRRVDPLLVTCRFFSVVTALTAILCIVSNVVAA 60

Query: 61  IRSFKNNSDIFDGIFRCYAVVISFFVVIAETEWEFILKNWQVLEYWAGGACCK---SLMT 120
           IRSFKN SDIFDGIFRCYAVVI+FFVV+AETEWEFILKNW+VLEYWAG    +   ++MT
Sbjct: 61  IRSFKNKSDIFDGIFRCYAVVIAFFVVLAETEWEFILKNWKVLEYWAGRGMLQIFVAVMT 120

Query: 121 RAFPVYSVEKRELILLQDAASYLLLACGAVYVVTGIMCIGFLKRAREEKETAKDRIVNDL 180
           RAFP YSVE+RE ILLQ+AASYLLLACGAVYVV+GI+CIGFLKRAREEKET+KDR+V DL
Sbjct: 121 RAFPAYSVEQREFILLQEAASYLLLACGAVYVVSGILCIGFLKRAREEKETSKDRVVKDL 180

[Close]

BLAST of Carg12629 vs. NCBI nr
Match: XP_038905258.1 (uncharacterized protein LOC120091338 isoform X1 [Benincasa hispida])

HSP 1 Score: 270.4 bits (690), Expect = 1.2e-68
Identity = 144/183 (78.69%), Postives = 161/183 (87.98%), Query Frame = 0


Query: 1   MDREGEGAAAAAAAAAAAASSSQANRSGRRVDPLLVTCRFFSIVTTLTAILCIVSNVISA 60
           M+R+GEG     A AAAA+SSSQ  R  RRVDPLLVTCRFFS++T LTAILCIVSNVISA
Sbjct: 1   MERDGEG-----APAAAASSSSQTIRPRRRVDPLLVTCRFFSVLTALTAILCIVSNVISA 60

Query: 61  IRSFKNNSDIFDGIFRCYAVVISFFVVIAETEWEFILKNWQVLEYWAGGACCK---SLMT 120
           IRSFKN SD+FDGIFRCYAVVI+ FVV+AETEWEFILKNW+VLEYWAG    +   ++MT
Sbjct: 61  IRSFKNKSDLFDGIFRCYAVVIACFVVLAETEWEFILKNWKVLEYWAGRGMLQIFVAVMT 120

Query: 121 RAFPVYSVEKRELILLQDAASYLLLACGAVYVVTGIMCIGFLKRAREEKETAKDRIVNDL 180
           RAFPVYSVE+RELILLQDAASYLLLACGAVYVV+GI+CIGFLKRAREEKETAKDR+V DL
Sbjct: 121 RAFPVYSVEQRELILLQDAASYLLLACGAVYVVSGILCIGFLKRAREEKETAKDRVVKDL 178

[Close]

BLAST of Carg12629 vs. ExPASy TrEMBL
Match: A0A6J1E3M8 (uncharacterized protein LOC111430498 OS=Cucurbita moschata OX=3662 GN=LOC111430498 PE=4 SV=1)

HSP 1 Score: 278.5 bits (711), Expect = 2.1e-71
Identity = 146/183 (79.78%), Postives = 163/183 (89.07%), Query Frame = 0


Query: 1   MDREGEGAAAAAAAAAAAASSSQANRSGRRVDPLLVTCRFFSIVTTLTAILCIVSNVISA 60
           M+R GEGAAA   AAA AASSSQ +R GRRVDPLLVTCRFFS+VT LTAILCIVSNVI+A
Sbjct: 1   MERGGEGAAAGTTAAATAASSSQTSRPGRRVDPLLVTCRFFSVVTALTAILCIVSNVIAA 60

Query: 61  IRSFKNNSDIFDGIFRCYAVVISFFVVIAETEWEFILKNWQVLEYWAGGACCK---SLMT 120
           IRSFKN SDIFDGIFRCYAVVI+FFVV+AETEWEFILKNW+VLEYWAG    +   ++MT
Sbjct: 61  IRSFKNKSDIFDGIFRCYAVVIAFFVVLAETEWEFILKNWKVLEYWAGRGMLQIFVAVMT 120

Query: 121 RAFPVYSVEKRELILLQDAASYLLLACGAVYVVTGIMCIGFLKRAREEKETAKDRIVNDL 180
           RAFP YSVE+RE ILLQ+AASYLLLACGAVYVV+GI+CIGFLKRAREEKET+KDR+V DL
Sbjct: 121 RAFPAYSVEQREFILLQEAASYLLLACGAVYVVSGILCIGFLKRAREEKETSKDRVVKDL 180

[Close]

BLAST of Carg12629 vs. ExPASy TrEMBL
Match: A0A6J1J849 (uncharacterized protein LOC111482612 OS=Cucurbita maxima OX=3661 GN=LOC111482612 PE=4 SV=1)

HSP 1 Score: 276.9 bits (707), Expect = 6.2e-71
Identity = 146/183 (79.78%), Postives = 162/183 (88.52%), Query Frame = 0


Query: 1   MDREGEGAAAAAAAAAAAASSSQANRSGRRVDPLLVTCRFFSIVTTLTAILCIVSNVISA 60
           M+R GEGAAA   AAA AASSSQ  R GRRVDPLLVTCRFFS+VT LTAILCIVSNVI+A
Sbjct: 1   MERGGEGAAAGTTAAATAASSSQTIRPGRRVDPLLVTCRFFSVVTALTAILCIVSNVIAA 60

Query: 61  IRSFKNNSDIFDGIFRCYAVVISFFVVIAETEWEFILKNWQVLEYWAGGACCK---SLMT 120
           IRSFKN SDIFDGIFRCYAVVI+FFVV+AETEWEFILKNW+VLEYWAG    +   ++MT
Sbjct: 61  IRSFKNKSDIFDGIFRCYAVVIAFFVVLAETEWEFILKNWKVLEYWAGRGMLQIFVAVMT 120

Query: 121 RAFPVYSVEKRELILLQDAASYLLLACGAVYVVTGIMCIGFLKRAREEKETAKDRIVNDL 180
           RAFP YSVE+RE ILLQ+AASYLLLACGAVYVV+GI+CIGFLKRAREEKET+KDR+V DL
Sbjct: 121 RAFPAYSVEQREFILLQEAASYLLLACGAVYVVSGILCIGFLKRAREEKETSKDRVVKDL 180

[Close]

BLAST of Carg12629 vs. ExPASy TrEMBL
Match: A0A1S3BY74 (uncharacterized protein LOC103494861 OS=Cucumis melo OX=3656 GN=LOC103494861 PE=4 SV=1)

HSP 1 Score: 266.2 bits (679), Expect = 1.1e-67
Identity = 140/183 (76.50%), Postives = 163/183 (89.07%), Query Frame = 0


Query: 1   MDREGEGAAAAAAAAAAAASSSQANRSGRRVDPLLVTCRFFSIVTTLTAILCIVSNVISA 60
           M+R GEG A AA+++++++SSSQ  R  R VDPLLVTCRFFS++T LTAILCIVSNVISA
Sbjct: 1   MERNGEG-APAASSSSSSSSSSQITRPRRSVDPLLVTCRFFSVITALTAILCIVSNVISA 60

Query: 61  IRSFKNNSDIFDGIFRCYAVVISFFVVIAETEWEFILKNWQVLEYWAGGACCK---SLMT 120
           IRSFKN SDIFDGIFRCYAVVI+FFVV+AETEWEFI KNW+VLEYWAG    +   ++MT
Sbjct: 61  IRSFKNQSDIFDGIFRCYAVVITFFVVLAETEWEFIFKNWKVLEYWAGRGMLQIFVAVMT 120

Query: 121 RAFPVYSVEKRELILLQDAASYLLLACGAVYVVTGIMCIGFLKRAREEKETAKDRIVNDL 180
           RAFPVYSVE+RELILLQDAASYLLLACGAVYVV+GI+CIGFLKRARE+KETAKD++V DL
Sbjct: 121 RAFPVYSVEQRELILLQDAASYLLLACGAVYVVSGILCIGFLKRAREKKETAKDKVVKDL 180

[Close]

BLAST of Carg12629 vs. ExPASy TrEMBL
Match: A0A0A0KYH6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G182250 PE=4 SV=1)

HSP 1 Score: 265.8 bits (678), Expect = 1.4e-67
Identity = 141/184 (76.63%), Postives = 162/184 (88.04%), Query Frame = 0


Query: 1   MDREGEGA-AAAAAAAAAAASSSQANRSGRRVDPLLVTCRFFSIVTTLTAILCIVSNVIS 60
           M+R GEGA A A AA+++++SSSQ  R  R VDPLLVTCRFFS++T LTAILCIVSNVIS
Sbjct: 1   MERNGEGAPALAPAASSSSSSSSQITRPRRSVDPLLVTCRFFSVITALTAILCIVSNVIS 60

Query: 61  AIRSFKNNSDIFDGIFRCYAVVISFFVVIAETEWEFILKNWQVLEYWAGGACCK---SLM 120
           AIRSFKN SDIFDGIFRCYAVVI+FF V+AETEWEFI KNW+VLEYWAG    +   ++M
Sbjct: 61  AIRSFKNQSDIFDGIFRCYAVVIAFFAVLAETEWEFIFKNWKVLEYWAGRGMLQIFVAVM 120

Query: 121 TRAFPVYSVEKRELILLQDAASYLLLACGAVYVVTGIMCIGFLKRAREEKETAKDRIVND 180
           TRAFPVYSVE+RELILLQDAASYLLLACGAVYVV+GI+CIGFLKRARE+KETAKD++V D
Sbjct: 121 TRAFPVYSVEQRELILLQDAASYLLLACGAVYVVSGILCIGFLKRAREKKETAKDKVVKD 180

[Close]

BLAST of Carg12629 vs. ExPASy TrEMBL
Match: A0A6J1D697 (uncharacterized protein LOC111017704 OS=Momordica charantia OX=3673 GN=LOC111017704 PE=4 SV=1)

HSP 1 Score: 238.4 bits (607), Expect = 2.4e-59
Identity = 125/187 (66.84%), Postives = 153/187 (81.82%), Query Frame = 0


Query: 1   MDREGE----GAAAAAAAAAAAASSSQANRSGRRVDPLLVTCRFFSIVTTLTAILCIVSN 60
           M ++GE    G     AA+++++SSS   R GRRVDPLLVTCRFFS++T LTAILCIV N
Sbjct: 1   MPKDGEEEVAGITPVPAASSSSSSSSHTTRHGRRVDPLLVTCRFFSVLTALTAILCIVVN 60

Query: 61  VISAIRSFKNNSDIFDGIFRCYAVVISFFVVIAETEWEFILKNWQVLEYWAGGACCK--- 120
           VISA+RSFK+ +DIFDGIFRCYAV+I+ FVV+AETEWEFI+K W+VLEYWAG    +   
Sbjct: 61  VISAVRSFKDKADIFDGIFRCYAVLIASFVVLAETEWEFIIKFWKVLEYWAGRGMLQIFV 120

Query: 121 SLMTRAFPVYSVEKRELILLQDAASYLLLACGAVYVVTGIMCIGFLKRAREEKETAKDRI 180
           ++MTRAFP YS ++RELI+LQD ASYLLL CGAVYV +GI+C+GFLKRAREEKETAK+R 
Sbjct: 121 AVMTRAFPAYSEDQRELIILQDVASYLLLGCGAVYVASGILCLGFLKRAREEKETAKERT 180

[Close]

BLAST of Carg12629 vs. TAIR 10
Match: AT4G33625.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Golgi apparatus membrane protein TVP15 (InterPro:IPR013714); Has 59 Blast hits to 59 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). )

HSP 1 Score: 197.2 bits (500), Expect = 1.2e-50
Identity = 97/168 (57.74%), Postives = 132/168 (78.57%), Query Frame = 0


Query: 16  AAAASSSQANRSGRRVDPLLVTCRFFSIVTTLTAILCIVSNVISAIRSFKNNSDIFDGIF 75
           A  +S S   + G R DP LV CR FS+VT+L AILC+V NV++A+RSF+++ D+FDGIF
Sbjct: 12  AGPSSGSAKLKLGNRADPFLVVCRCFSLVTSLIAILCVVVNVLAAVRSFRDSHDLFDGIF 71

Query: 76  RCYAVVISFFVVIAETEWEFILKNWQVLEYWAGGACCK---SLMTRAFPVYSVEKRELIL 135
           RCYAVVI+ FVV+ ETEW FILK  +VLEYWAG    +   ++MTRAFP Y  +K++L+L
Sbjct: 72  RCYAVVIACFVVLVETEWGFILKFSKVLEYWAGRGMLQIFVAVMTRAFPDYMTQKKDLLL 131

Query: 136 LQDAASYLLLACGAVYVVTGIMCIGFLKRAREEKETAKDRIVNDLQNI 181
           LQ+ ASYLLLACG +YV++G++CIGFLKRAR++KE ++++ V DL+ I
Sbjct: 132 LQNIASYLLLACGVIYVISGVLCIGFLKRARQQKEVSREQAVKDLEEI 179

[Close]

BLAST of Carg12629 vs. TAIR 10
Match: AT4G33625.2 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Golgi apparatus membrane protein TVP15 (InterPro:IPR013714); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 195.7 bits (496), Expect = 3.5e-50
Identity = 96/166 (57.83%), Postives = 131/166 (78.92%), Query Frame = 0


Query: 16  AAAASSSQANRSGRRVDPLLVTCRFFSIVTTLTAILCIVSNVISAIRSFKNNSDIFDGIF 75
           A  +S S   + G R DP LV CR FS+VT+L AILC+V NV++A+RSF+++ D+FDGIF
Sbjct: 12  AGPSSGSAKLKLGNRADPFLVVCRCFSLVTSLIAILCVVVNVLAAVRSFRDSHDLFDGIF 71

Query: 76  RCYAVVISFFVVIAETEWEFILKNWQVLEYWAGGACCK---SLMTRAFPVYSVEKRELIL 135
           RCYAVVI+ FVV+ ETEW FILK  +VLEYWAG    +   ++MTRAFP Y  +K++L+L
Sbjct: 72  RCYAVVIACFVVLVETEWGFILKFSKVLEYWAGRGMLQIFVAVMTRAFPDYMTQKKDLLL 131

Query: 136 LQDAASYLLLACGAVYVVTGIMCIGFLKRAREEKETAKDRIVNDLQ 179
           LQ+ ASYLLLACG +YV++G++CIGFLKRAR++KE ++++ V DL+
Sbjct: 132 LQNIASYLLLACGVIYVISGVLCIGFLKRARQQKEVSREQAVKDLE 177

The following BLAST results are available for this feature:

BLAST of Carg12629 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7027511.1	7.9e-97	100.00	hypothetical protein SDJN02_11525, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022922529.1	4.4e-71	79.78	uncharacterized protein LOC111430498 [Cucurbita moschata] >KAG6576880.1 hypothet...	[more]
XP_022984240.1	1.3e-70	79.78	uncharacterized protein LOC111482612 [Cucurbita maxima] >XP_022984241.1 uncharac...	[more]
XP_023552582.1	1.7e-70	78.69	uncharacterized protein LOC111810200 isoform X2 [Cucurbita pepo subsp. pepo]	[more]
XP_038905258.1	1.2e-68	78.69	uncharacterized protein LOC120091338 isoform X1 [Benincasa hispida]	[more]

BLAST of Carg12629 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg12629 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E3M8	2.1e-71	79.78	uncharacterized protein LOC111430498 OS=Cucurbita moschata OX=3662 GN=LOC1114304...	[more]
A0A6J1J849	6.2e-71	79.78	uncharacterized protein LOC111482612 OS=Cucurbita maxima OX=3661 GN=LOC111482612...	[more]
A0A1S3BY74	1.1e-67	76.50	uncharacterized protein LOC103494861 OS=Cucumis melo OX=3656 GN=LOC103494861 PE=...	[more]
A0A0A0KYH6	1.4e-67	76.63	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G182250 PE=4 SV=1	[more]
A0A6J1D697	2.4e-59	66.84	uncharacterized protein LOC111017704 OS=Momordica charantia OX=3673 GN=LOC111017...	[more]

BLAST of Carg12629 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G33625.1	1.2e-50	57.74	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]
AT4G33625.2	3.5e-50	57.83	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 159..179
None	No IPR available	PANTHER	PTHR34965	OS07G0118300 PROTEIN	coord: 13..180

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg12629-RA	Carg12629-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane