Carg12535 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg12535
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Heat shock protein DnaJ, cysteine-rich domain containing protein
Location	Carg_Chr14: 536191 .. 537333 (+)
RNA-Seq Expression	Carg12535
Synteny	Carg12535

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAGAGATGTCAGGACAAAATTAGAAGGGAGAGTTAGTCGCTAAAAAATTCATATGGTGGGCCATTCTTATCTACACAACAATCAGAACCTTAAGTCGGATATAGCCTTATCCAGATTTCATTCAACTTCAAAACATCCCTCCATCCTTTCCAACCACCAAATTATAAAAAATCTGTTCTTGATCTTCTTCCATCCCTGAATTCAGATTCAGTTTCAGTCCTCTGGAAAACATGGCATCCTTGTGTACATTTCCACGTATTTCTTCCACAGAACCCATCAAGCAAACGCCCGCCGCCGCCCCTTTTCCGCCCTCCAATCAGCCGATGAGACCCTCGGCGTTGTCCCTCCGCCAAAGCAGCAGCAAGCACCGGAGAATTTCTACAGTGGTCGCCGCCATTGGAGATGTCTCCGCCGATGGCACCACCTACTTGATCGCCGGCGCTGTAGCTGTGGCTCTTGTCGGAACCGCCTTCCCTATCCTCTTCTCTCGCAAAGACCTGTAAGTAAAATTTCTAGTACTTCTATAGCCATCTATTTCTGCATTGAAATTAAATTAACAAATGCGATTTAAAGAATACGTCACCATAAATTTTCCCCTTTTCTCTGCAGTGGAATTCTGTTCTGCTTCTGTTATTGTCTTTTACTCTTAATTACAGTTTCAGTCTCACGACATTAATTAAACAAACTACCCATCTGCAATGCTTTAAGAGGAGCTTTAATTTAAATTTCAATGGTTGAGATTTTAATTGCGGCGGCGGTTTTCGTGGTCTGGTCTACCGTAGGTGTCCGGAATGCGACGGCGCAGGGTTTGTCCGGCGATCAGGAGCGGCGCTGAGGGCTAATGCGGCTCGCAAAGACCAAACTCAGATCGTTTGTGCTCGTTGCAATGGCCTTGGCAAGCTCAACCAAGTGGACAAATAAATTAAAACCTGCCTTTTTTAGCCCCATCATAAATTCCATACTTTATTAATGCTGTAATAATCTATTTTTAATATATTTTAGTCGATGTCCTTCGAGTCTTTGGAACTGTAATATTTGTTTTTAACCTAACATTTGAATTCGAATTAGTTTTTTTTTTTTTTTAATTATGCTTTGACCGATATAATATATTTAACGTTAAATGACATTATTAACGAGGTCATT

mRNA sequence

TAGAGATGTCAGGACAAAATTAGAAGGGAGAGTTAGTCGCTAAAAAATTCATATGGTGGGCCATTCTTATCTACACAACAATCAGAACCTTAAGTCGGATATAGCCTTATCCAGATTTCATTCAACTTCAAAACATCCCTCCATCCTTTCCAACCACCAAATTATAAAAAATCTGTTCTTGATCTTCTTCCATCCCTGAATTCAGATTCAGTTTCAGTCCTCTGGAAAACATGGCATCCTTGTGTACATTTCCACGTATTTCTTCCACAGAACCCATCAAGCAAACGCCCGCCGCCGCCCCTTTTCCGCCCTCCAATCAGCCGATGAGACCCTCGGCGTTGTCCCTCCGCCAAAGCAGCAGCAAGCACCGGAGAATTTCTACAGTGGTCGCCGCCATTGGAGATGTCTCCGCCGATGGCACCACCTACTTGATCGCCGGCGCTGTAGCTGTGGCTCTTGTCGGAACCGCCTTCCCTATCCTCTTCTCTCGCAAAGACCTGTGTCCGGAATGCGACGGCGCAGGGTTTGTCCGGCGATCAGGAGCGGCGCTGAGGGCTAATGCGGCTCGCAAAGACCAAACTCAGATCGTTTGTGCTCGTTGCAATGGCCTTGGCAAGCTCAACCAAGTGGACAAATAAATTAAAACCTGCCTTTTTTAGCCCCATCATAAATTCCATACTTTATTAATGCTGTAATAATCTATTTTTAATATATTTTAGTCGATGTCCTTCGAGTCTTTGGAACTGTAATATTTGTTTTTAACCTAACATTTGAATTCGAATTAGTTTTTTTTTTTTTTTAATTATGCTTTGACCGATATAATATATTTAACGTTAAATGACATTATTAACGAGGTCATT

Coding sequence (CDS)

ATGGCATCCTTGTGTACATTTCCACGTATTTCTTCCACAGAACCCATCAAGCAAACGCCCGCCGCCGCCCCTTTTCCGCCCTCCAATCAGCCGATGAGACCCTCGGCGTTGTCCCTCCGCCAAAGCAGCAGCAAGCACCGGAGAATTTCTACAGTGGTCGCCGCCATTGGAGATGTCTCCGCCGATGGCACCACCTACTTGATCGCCGGCGCTGTAGCTGTGGCTCTTGTCGGAACCGCCTTCCCTATCCTCTTCTCTCGCAAAGACCTGTGTCCGGAATGCGACGGCGCAGGGTTTGTCCGGCGATCAGGAGCGGCGCTGAGGGCTAATGCGGCTCGCAAAGACCAAACTCAGATCGTTTGTGCTCGTTGCAATGGCCTTGGCAAGCTCAACCAAGTGGACAAATAA

Protein sequence

MASLCTFPRISSTEPIKQTPAAAPFPPSNQPMRPSALSLRQSSSKHRRISTVVAAIGDVSADGTTYLIAGAVAVALVGTAFPILFSRKDLCPECDGAGFVRRSGAALRANAARKDQTQIVCARCNGLGKLNQVDK

Homology

[Close]

BLAST of Carg12535 vs. NCBI nr
Match: XP_023528629.1 (uncharacterized protein LOC111791489 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 260.4 bits (664), Expect = 8.7e-66
Identity = 135/135 (100.00%), Postives = 135/135 (100.00%), Query Frame = 0


Query: 1   MASLCTFPRISSTEPIKQTPAAAPFPPSNQPMRPSALSLRQSSSKHRRISTVVAAIGDVS 60
           MASLCTFPRISSTEPIKQTPAAAPFPPSNQPMRPSALSLRQSSSKHRRISTVVAAIGDVS
Sbjct: 60  MASLCTFPRISSTEPIKQTPAAAPFPPSNQPMRPSALSLRQSSSKHRRISTVVAAIGDVS 119

Query: 61  ADGTTYLIAGAVAVALVGTAFPILFSRKDLCPECDGAGFVRRSGAALRANAARKDQTQIV 120
           ADGTTYLIAGAVAVALVGTAFPILFSRKDLCPECDGAGFVRRSGAALRANAARKDQTQIV
Sbjct: 120 ADGTTYLIAGAVAVALVGTAFPILFSRKDLCPECDGAGFVRRSGAALRANAARKDQTQIV 179

Query: 121 CARCNGLGKLNQVDK 136
           CARCNGLGKLNQVDK
Sbjct: 180 CARCNGLGKLNQVDK 194

[Close]

BLAST of Carg12535 vs. NCBI nr
Match: XP_022935020.1 (uncharacterized protein LOC111442008 [Cucurbita moschata] >XP_022935021.1 uncharacterized protein LOC111442008 [Cucurbita moschata] >KAG6580531.1 hypothetical protein SDJN03_20533, partial [Cucurbita argyrosperma subsp. sororia] >KAG7017282.1 hypothetical protein SDJN02_19145 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 260.4 bits (664), Expect = 8.7e-66
Identity = 135/135 (100.00%), Postives = 135/135 (100.00%), Query Frame = 0


Query: 1   MASLCTFPRISSTEPIKQTPAAAPFPPSNQPMRPSALSLRQSSSKHRRISTVVAAIGDVS 60
           MASLCTFPRISSTEPIKQTPAAAPFPPSNQPMRPSALSLRQSSSKHRRISTVVAAIGDVS
Sbjct: 1   MASLCTFPRISSTEPIKQTPAAAPFPPSNQPMRPSALSLRQSSSKHRRISTVVAAIGDVS 60

Query: 61  ADGTTYLIAGAVAVALVGTAFPILFSRKDLCPECDGAGFVRRSGAALRANAARKDQTQIV 120
           ADGTTYLIAGAVAVALVGTAFPILFSRKDLCPECDGAGFVRRSGAALRANAARKDQTQIV
Sbjct: 61  ADGTTYLIAGAVAVALVGTAFPILFSRKDLCPECDGAGFVRRSGAALRANAARKDQTQIV 120

Query: 121 CARCNGLGKLNQVDK 136
           CARCNGLGKLNQVDK
Sbjct: 121 CARCNGLGKLNQVDK 135

[Close]

BLAST of Carg12535 vs. NCBI nr
Match: XP_022983996.1 (uncharacterized protein LOC111482446 [Cucurbita maxima])

HSP 1 Score: 253.4 bits (646), Expect = 1.1e-63
Identity = 131/135 (97.04%), Postives = 132/135 (97.78%), Query Frame = 0


Query: 1   MASLCTFPRISSTEPIKQTPAAAPFPPSNQPMRPSALSLRQSSSKHRRISTVVAAIGDVS 60
           MASLCTFPRISSTEPIKQTPAAAPFPPSNQPMRPSALSLRQSS KH R STVVAA+GDVS
Sbjct: 1   MASLCTFPRISSTEPIKQTPAAAPFPPSNQPMRPSALSLRQSSGKHWRTSTVVAAVGDVS 60

Query: 61  ADGTTYLIAGAVAVALVGTAFPILFSRKDLCPECDGAGFVRRSGAALRANAARKDQTQIV 120
           ADGTTYLIAGAVAVALVGTAFPILFSRKDLCPECDGAGFVRRSGAALRANAARKDQTQIV
Sbjct: 61  ADGTTYLIAGAVAVALVGTAFPILFSRKDLCPECDGAGFVRRSGAALRANAARKDQTQIV 120

Query: 121 CARCNGLGKLNQVDK 136
           CARCNGLGKLNQVDK
Sbjct: 121 CARCNGLGKLNQVDK 135

[Close]

BLAST of Carg12535 vs. NCBI nr
Match: XP_038905250.1 (uncharacterized protein LOC120091333 [Benincasa hispida])

HSP 1 Score: 240.7 bits (613), Expect = 7.1e-60
Identity = 124/135 (91.85%), Postives = 128/135 (94.81%), Query Frame = 0


Query: 1   MASLCTFPRISSTEPIKQTPAAAPFPPSNQPMRPSALSLRQSSSKHRRISTVVAAIGDVS 60
           MASLC+FPRISSTEPIKQ P AAPFP SN P+RPSALSLRQ S KH+RIS VVAA+GDVS
Sbjct: 1   MASLCSFPRISSTEPIKQPPTAAPFPSSNHPIRPSALSLRQISPKHKRISVVVAAVGDVS 60

Query: 61  ADGTTYLIAGAVAVALVGTAFPILFSRKDLCPECDGAGFVRRSGAALRANAARKDQTQIV 120
           ADGTTYLIAGAVAVALVGTAFPILFSRKDLCPECDGAGFVRRSGAALRANAARKDQTQIV
Sbjct: 61  ADGTTYLIAGAVAVALVGTAFPILFSRKDLCPECDGAGFVRRSGAALRANAARKDQTQIV 120

Query: 121 CARCNGLGKLNQVDK 136
           CARCNGLGKLNQVDK
Sbjct: 121 CARCNGLGKLNQVDK 135

[Close]

BLAST of Carg12535 vs. NCBI nr
Match: XP_008442527.1 (PREDICTED: uncharacterized protein LOC103486375 [Cucumis melo])

HSP 1 Score: 239.6 bits (610), Expect = 1.6e-59
Identity = 120/135 (88.89%), Postives = 129/135 (95.56%), Query Frame = 0


Query: 1   MASLCTFPRISSTEPIKQTPAAAPFPPSNQPMRPSALSLRQSSSKHRRISTVVAAIGDVS 60
           MASLC+FPRISSTEPIKQ+PA APFPPSN P+RPS LSLRQSS  H+RISTVVAA+GDVS
Sbjct: 1   MASLCSFPRISSTEPIKQSPATAPFPPSNHPIRPSTLSLRQSSRNHKRISTVVAAVGDVS 60

Query: 61  ADGTTYLIAGAVAVALVGTAFPILFSRKDLCPECDGAGFVRRSGAALRANAARKDQTQIV 120
           +DGTTYLIAGA+AVALVGTAFPI FSRKDLCPEC+GAGFVRRSG+ALRANAARKDQTQIV
Sbjct: 61  SDGTTYLIAGAIAVALVGTAFPIFFSRKDLCPECEGAGFVRRSGSALRANAARKDQTQIV 120

Query: 121 CARCNGLGKLNQVDK 136
           CARCNGLGKLNQVDK
Sbjct: 121 CARCNGLGKLNQVDK 135

[Close]

BLAST of Carg12535 vs. ExPASy TrEMBL
Match: A0A6J1F9E5 (uncharacterized protein LOC111442008 OS=Cucurbita moschata OX=3662 GN=LOC111442008 PE=4 SV=1)

HSP 1 Score: 260.4 bits (664), Expect = 4.2e-66
Identity = 135/135 (100.00%), Postives = 135/135 (100.00%), Query Frame = 0


Query: 1   MASLCTFPRISSTEPIKQTPAAAPFPPSNQPMRPSALSLRQSSSKHRRISTVVAAIGDVS 60
           MASLCTFPRISSTEPIKQTPAAAPFPPSNQPMRPSALSLRQSSSKHRRISTVVAAIGDVS
Sbjct: 1   MASLCTFPRISSTEPIKQTPAAAPFPPSNQPMRPSALSLRQSSSKHRRISTVVAAIGDVS 60

Query: 61  ADGTTYLIAGAVAVALVGTAFPILFSRKDLCPECDGAGFVRRSGAALRANAARKDQTQIV 120
           ADGTTYLIAGAVAVALVGTAFPILFSRKDLCPECDGAGFVRRSGAALRANAARKDQTQIV
Sbjct: 61  ADGTTYLIAGAVAVALVGTAFPILFSRKDLCPECDGAGFVRRSGAALRANAARKDQTQIV 120

Query: 121 CARCNGLGKLNQVDK 136
           CARCNGLGKLNQVDK
Sbjct: 121 CARCNGLGKLNQVDK 135

[Close]

BLAST of Carg12535 vs. ExPASy TrEMBL
Match: A0A6J1J3Y5 (uncharacterized protein LOC111482446 OS=Cucurbita maxima OX=3661 GN=LOC111482446 PE=4 SV=1)

HSP 1 Score: 253.4 bits (646), Expect = 5.1e-64
Identity = 131/135 (97.04%), Postives = 132/135 (97.78%), Query Frame = 0


Query: 1   MASLCTFPRISSTEPIKQTPAAAPFPPSNQPMRPSALSLRQSSSKHRRISTVVAAIGDVS 60
           MASLCTFPRISSTEPIKQTPAAAPFPPSNQPMRPSALSLRQSS KH R STVVAA+GDVS
Sbjct: 1   MASLCTFPRISSTEPIKQTPAAAPFPPSNQPMRPSALSLRQSSGKHWRTSTVVAAVGDVS 60

Query: 61  ADGTTYLIAGAVAVALVGTAFPILFSRKDLCPECDGAGFVRRSGAALRANAARKDQTQIV 120
           ADGTTYLIAGAVAVALVGTAFPILFSRKDLCPECDGAGFVRRSGAALRANAARKDQTQIV
Sbjct: 61  ADGTTYLIAGAVAVALVGTAFPILFSRKDLCPECDGAGFVRRSGAALRANAARKDQTQIV 120

Query: 121 CARCNGLGKLNQVDK 136
           CARCNGLGKLNQVDK
Sbjct: 121 CARCNGLGKLNQVDK 135

[Close]

BLAST of Carg12535 vs. ExPASy TrEMBL
Match: A0A1S3B5E7 (uncharacterized protein LOC103486375 OS=Cucumis melo OX=3656 GN=LOC103486375 PE=4 SV=1)

HSP 1 Score: 239.6 bits (610), Expect = 7.7e-60
Identity = 120/135 (88.89%), Postives = 129/135 (95.56%), Query Frame = 0


Query: 1   MASLCTFPRISSTEPIKQTPAAAPFPPSNQPMRPSALSLRQSSSKHRRISTVVAAIGDVS 60
           MASLC+FPRISSTEPIKQ+PA APFPPSN P+RPS LSLRQSS  H+RISTVVAA+GDVS
Sbjct: 1   MASLCSFPRISSTEPIKQSPATAPFPPSNHPIRPSTLSLRQSSRNHKRISTVVAAVGDVS 60

Query: 61  ADGTTYLIAGAVAVALVGTAFPILFSRKDLCPECDGAGFVRRSGAALRANAARKDQTQIV 120
           +DGTTYLIAGA+AVALVGTAFPI FSRKDLCPEC+GAGFVRRSG+ALRANAARKDQTQIV
Sbjct: 61  SDGTTYLIAGAIAVALVGTAFPIFFSRKDLCPECEGAGFVRRSGSALRANAARKDQTQIV 120

Query: 121 CARCNGLGKLNQVDK 136
           CARCNGLGKLNQVDK
Sbjct: 121 CARCNGLGKLNQVDK 135

[Close]

BLAST of Carg12535 vs. ExPASy TrEMBL
Match: A0A0A0LDN8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G734100 PE=4 SV=1)

HSP 1 Score: 235.3 bits (599), Expect = 1.5e-58
Identity = 119/135 (88.15%), Postives = 128/135 (94.81%), Query Frame = 0


Query: 1   MASLCTFPRISSTEPIKQTPAAAPFPPSNQPMRPSALSLRQSSSKHRRISTVVAAIGDVS 60
           MASLC+FPRISSTEPIKQ+PA APFPPSN  ++PS LSLRQSS  H+RISTVVAA+GDVS
Sbjct: 1   MASLCSFPRISSTEPIKQSPAVAPFPPSNHSIKPSTLSLRQSSRNHKRISTVVAAVGDVS 60

Query: 61  ADGTTYLIAGAVAVALVGTAFPILFSRKDLCPECDGAGFVRRSGAALRANAARKDQTQIV 120
           +DGTTYLIAGA+AVALVGTAFPILFSRKDLCPECDGAGFVRRS +ALRANAARKDQTQIV
Sbjct: 61  SDGTTYLIAGAIAVALVGTAFPILFSRKDLCPECDGAGFVRRSESALRANAARKDQTQIV 120

Query: 121 CARCNGLGKLNQVDK 136
           CARCNGLGKLNQVDK
Sbjct: 121 CARCNGLGKLNQVDK 135

[Close]

BLAST of Carg12535 vs. ExPASy TrEMBL
Match: A0A6J1I3R1 (uncharacterized protein LOC111470276 OS=Cucurbita maxima OX=3661 GN=LOC111470276 PE=4 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 1.1e-55
Identity = 118/135 (87.41%), Postives = 124/135 (91.85%), Query Frame = 0


Query: 1   MASLCTFPRISSTEPIKQTPAAAPFPPSNQPMRPSALSLRQSSSKHRRISTVVAAIGDVS 60
           MASLC+FPRISS +PIK  PAAAPFPPSN P RPSALSLRQSS   +R ST+VAAIGDVS
Sbjct: 1   MASLCSFPRISSADPIKH-PAAAPFPPSNHPKRPSALSLRQSSRNQKRTSTIVAAIGDVS 60

Query: 61  ADGTTYLIAGAVAVALVGTAFPILFSRKDLCPECDGAGFVRRSGAALRANAARKDQTQIV 120
           ADGTTYLIAGAVAVALVGTAFPILFSRKDLCP CDGAGFVR+SGAALRANAARKDQ QIV
Sbjct: 61  ADGTTYLIAGAVAVALVGTAFPILFSRKDLCPVCDGAGFVRKSGAALRANAARKDQAQIV 120

Query: 121 CARCNGLGKLNQVDK 136
           C+RCNGLGKLNQVDK
Sbjct: 121 CSRCNGLGKLNQVDK 134

[Close]

BLAST of Carg12535 vs. TAIR 10
Match: AT5G02160.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 121 Blast hits to 121 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 121; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 145.2 bits (365), Expect = 3.8e-35
Identity = 73/102 (71.57%), Postives = 81/102 (79.41%), Query Frame = 0


Query: 34  PSALSLRQSSSKHRRISTVVAAIGDVSADGTTYLIAGAVAVALVGTAFPILFSRKDLCPE 93
           PS  ++    +K    S VVAA+GDVS+DGT YLI GA+AVALVGTAFPILF RKD CPE
Sbjct: 27  PSPNNVILPKNKRSSSSVVVAAVGDVSSDGTIYLIGGAIAVALVGTAFPILFKRKDTCPE 86

Query: 94  CDGAGFVRRSGAALRANAARKDQTQIVCARCNGLGKLNQVDK 136
           CDGAGFVR+ G  LRANAARKD  QIVCA CNGLGKLNQ+DK
Sbjct: 87  CDGAGFVRKGGVTLRANAARKDLPQIVCANCNGLGKLNQIDK 128

The following BLAST results are available for this feature:

BLAST of Carg12535 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023528629.1	8.7e-66	100.00	uncharacterized protein LOC111791489 [Cucurbita pepo subsp. pepo]	[more]
XP_022935020.1	8.7e-66	100.00	uncharacterized protein LOC111442008 [Cucurbita moschata] >XP_022935021.1 unchar...	[more]
XP_022983996.1	1.1e-63	97.04	uncharacterized protein LOC111482446 [Cucurbita maxima]	[more]
XP_038905250.1	7.1e-60	91.85	uncharacterized protein LOC120091333 [Benincasa hispida]	[more]
XP_008442527.1	1.6e-59	88.89	PREDICTED: uncharacterized protein LOC103486375 [Cucumis melo]	[more]

BLAST of Carg12535 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg12535 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F9E5	4.2e-66	100.00	uncharacterized protein LOC111442008 OS=Cucurbita moschata OX=3662 GN=LOC1114420...	[more]
A0A6J1J3Y5	5.1e-64	97.04	uncharacterized protein LOC111482446 OS=Cucurbita maxima OX=3661 GN=LOC111482446...	[more]
A0A1S3B5E7	7.7e-60	88.89	uncharacterized protein LOC103486375 OS=Cucumis melo OX=3656 GN=LOC103486375 PE=...	[more]
A0A0A0LDN8	1.5e-58	88.15	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G734100 PE=4 SV=1	[more]
A0A6J1I3R1	1.1e-55	87.41	uncharacterized protein LOC111470276 OS=Cucurbita maxima OX=3661 GN=LOC111470276...	[more]

BLAST of Carg12535 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G02160.1	3.8e-35	71.57	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 16..45
None	No IPR available	PANTHER	PTHR36389	OS05G0110100 PROTEIN	coord: 1..135
IPR036410	Heat shock protein DnaJ, cysteine-rich domain superfamily	SUPERFAMILY	57938	DnaJ/Hsp40 cysteine-rich domain	coord: 84..130

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg12535-RA	Carg12535-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0046274	lignin catabolic process
biological_process	GO:0006508	proteolysis
cellular_component	GO:0048046	apoplast
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0004190	aspartic-type endopeptidase activity
molecular_function	GO:0005507	copper ion binding
molecular_function	GO:0052716	hydroquinone:oxygen oxidoreductase activity