Carg12425 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg12425
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	RING/U-box superfamily protein
Location	Carg_Chr01: 3530722 .. 3532977 (-)
RNA-Seq Expression	Carg12425
Synteny	Carg12425

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGAGAAAAACCGGCGTTTGCTTGTGCTTTTGCTTGATCAGTTCGAAAGAATTTCGGATTATCGATTACGAGATTTTGTTTTTTGGTTGATTTTTTGATGTTAGATTATGAGGATAATCTGTAGGGTTTCGGTTCTAGATTTTGATTCTACTTGATCGATCATTCGTTTTCGTTGGATTGGATTTTTCTTTTCCGGGAAAATTCGACCGCCATGGGAAAGCTTTCGTTCAAGGATTCGCTCAAAGCGCTTGAAGCCGATGTACAGCATGCCAATACTCTGTAACTTTCTTCTTCATTCTCTTTGAGAAACGAAATTTTCGATTTGTATGGAGAATCTTTGTTTCTGCAATTTTTGGCCGTAAATTCCACTCTGAAAACACCGATGAGTTAATAAACTGATTCTGGCATGTTTATGGCTTGATTTTTCTTGTTAATTGGTTCTTTCTCTGGTTTTGTCTAGAAGATACATATTCTACTGGCGACAGTACAAGGGACTGTTTACTTTTTGAAACTGTCTACATTATTGAATGTTGGATGAGCAATATAAATATTTTTCAGTGAATTGTCCAGTCAAATTAAGAATGATTTAGCTTCTGTACTGCTATTGAATTTCATTACTGCTTTGTGTTTTTTTGTTTTTCAATTGTTTTTTGTATCAGTGAATAGGGAAGAAATTGCATCGTTGATTGCTCTTTCTGTCTGTGTAAAAGTTGAGCAGTACGGGACTGAAGAAATATCTGAGATGAGAAAGAGGGGGGATATCAGATTGATAGCAAATTCATATGAATTAGCATTAACAAATTGTTGTGGTCAAATTTTCTCTGAGCCCTGTTTTTCTTGTTTAACCATTCCTCTTTTGTTTGCAGTGCTTTAGACTGTCCAAGAGAGAGTGATGGAGCTTGTGTTCAAATGAGAATATCTTACAGTCCTGCCGCTCCCTTTTTCCTTTTTCTTGTTCAATGGACTGACTGCCGCCTTGCTGGTGCCTTGGGGCTGCTAAGAATCCATGTCTATGTGGTATGCCTTCTACATTTTGGTACTATTTGGCAATAGTTACCAGTTAGCAGCTTTTTTGTTTGTTCATGTAGGCTTGATATTTTCTCCATAGAAGGCCTTATCTGTACTAACTTAATAAGAGGTCTGATGTTCTATTTCTTGACAATGAAGGTCAATATTGTTTAATTACTTCTTGTCGTGTAATGTTATGAAGCAGACTTATCCAGATGGAAAGACCACCATGTCCATTTATGAGCGAAAATCTAGCATTAGAGAATTTTATGGTGAGTGAGATTCTTAGATTGCATCTTAAGTATTGGAACTTAGCTTTCTGGTCTTGGTCTTGGTCTTGTTCTTGTTCTTGTTCTTTTCTGGTGGGGGTGTTAATGGATTGTTCTTCTCATCAACAGCGGTAATCTTCCCTTCTCTTCTGCAACTTCAAAAGGGCATCACAGAATTGGAAGATAGGAAACAGAAAGAGGTTTGCAATTCCAGATACAAAAGAAGGGATGAAGTTGCAAGGGGAAAACTGTCAGAAATCGACAAAGAAAGAGAAAAGGAGTGTGGAATTTGCATGGAGGTTAACAGCATTGTTGTTTTACCTCATTGCAACCATTCTTTGTGCTTGAAATGTTATCGAGATTGGTAAGTTTTAGACTATGATTTTACTTTTCAATTGAACACAATCAGCAAAAAAAGATAGAATCAAAAGTGCTTTCAAGAAAGTAGACTAAGTTTGAAATCAGATTATCTGTTGGATCTGAAAATCTTCAAAATTATCCTGATTTGATTAGTTTGCATTCAGTGCTAGCACTATTCTTAGACTCATATTCAACCTTATCTTGTCTGTCTGTTTCATCGTCCAGGCGCAGTCGTTCTCAGTCGTGTCCCTTCTGTCGGGATAGCCTCAAGCGAGTGAACTCCGGCGACCTATGGATCTACACAGACAGGAATGAAACGATTGATCTTACTTCAATTTTGCAGGAGAACCGGAAGAGACTATTTATGTACATTAATAAGTTGCCATTGGTTGTTCCAGATCCAGTGTTTCTTCCTCTTGATTCTCATATTAGATGAAGAATGGGGGACGCACCTCTTCAATCTGTGAGTAGTAGTTTCAACTTTCTGTGTAGATAATTGATTGTAGGTTGATAAGATAGGGATTGTAGAAGGGATGTTTGCCAAATTTCATTTTCTTAGTTTATCAAAGTAAATGCTTTTGGTTCACCCAATGCAAAAGTTTGTTGAAATATCAACAAAT

mRNA sequence

TGAGAAAAACCGGCGTTTGCTTGTGCTTTTGCTTGATCAGTTCGAAAGAATTTCGGATTATCGATTACGAGATTTTGTTTTTTGGTTGATTTTTTGATGTTAGATTATGAGGATAATCTGTAGGGTTTCGGTTCTAGATTTTGATTCTACTTGATCGATCATTCGTTTTCGTTGGATTGGATTTTTCTTTTCCGGGAAAATTCGACCGCCATGGGAAAGCTTTCGTTCAAGGATTCGCTCAAAGCGCTTGAAGCCGATGTACAGCATGCCAATACTCTTGCTTTAGACTGTCCAAGAGAGAGTGATGGAGCTTGTGTTCAAATGAGAATATCTTACAGTCCTGCCGCTCCCTTTTTCCTTTTTCTTGTTCAATGGACTGACTGCCGCCTTGCTGGTGCCTTGGGGCTGCTAAGAATCCATGTCTATGTGACTTATCCAGATGGAAAGACCACCATGTCCATTTATGAGCGAAAATCTAGCATTAGAGAATTTTATGCGGTAATCTTCCCTTCTCTTCTGCAACTTCAAAAGGGCATCACAGAATTGGAAGATAGGAAACAGAAAGAGGTTTGCAATTCCAGATACAAAAGAAGGGATGAAGTTGCAAGGGGAAAACTGTCAGAAATCGACAAAGAAAGAGAAAAGGAGTGTGGAATTTGCATGGAGGTTAACAGCATTGTTGTTTTACCTCATTGCAACCATTCTTTGTGCTTGAAATGTTATCGAGATTGGCGCAGTCGTTCTCAGTCGTGTCCCTTCTGTCGGGATAGCCTCAAGCGAGTGAACTCCGGCGACCTATGGATCTACACAGACAGGAATGAAACGATTGATCTTACTTCAATTTTGCAGGAGAACCGGAAGAGACTATTTATGTACATTAATAAGTTGCCATTGGTTGTTCCAGATCCAGTGTTTCTTCCTCTTGATTCTCATATTAGATGAAGAATGGGGGACGCACCTCTTCAATCTGTGAGTAGTAGTTTCAACTTTCTGTGTAGATAATTGATTGTAGGTTGATAAGATAGGGATTGTAGAAGGGATGTTTGCCAAATTTCATTTTCTTAGTTTATCAAAGTAAATGCTTTTGGTTCACCCAATGCAAAAGTTTGTTGAAATATCAACAAAT

Coding sequence (CDS)

ATGGGAAAGCTTTCGTTCAAGGATTCGCTCAAAGCGCTTGAAGCCGATGTACAGCATGCCAATACTCTTGCTTTAGACTGTCCAAGAGAGAGTGATGGAGCTTGTGTTCAAATGAGAATATCTTACAGTCCTGCCGCTCCCTTTTTCCTTTTTCTTGTTCAATGGACTGACTGCCGCCTTGCTGGTGCCTTGGGGCTGCTAAGAATCCATGTCTATGTGACTTATCCAGATGGAAAGACCACCATGTCCATTTATGAGCGAAAATCTAGCATTAGAGAATTTTATGCGGTAATCTTCCCTTCTCTTCTGCAACTTCAAAAGGGCATCACAGAATTGGAAGATAGGAAACAGAAAGAGGTTTGCAATTCCAGATACAAAAGAAGGGATGAAGTTGCAAGGGGAAAACTGTCAGAAATCGACAAAGAAAGAGAAAAGGAGTGTGGAATTTGCATGGAGGTTAACAGCATTGTTGTTTTACCTCATTGCAACCATTCTTTGTGCTTGAAATGTTATCGAGATTGGCGCAGTCGTTCTCAGTCGTGTCCCTTCTGTCGGGATAGCCTCAAGCGAGTGAACTCCGGCGACCTATGGATCTACACAGACAGGAATGAAACGATTGATCTTACTTCAATTTTGCAGGAGAACCGGAAGAGACTATTTATGTACATTAATAAGTTGCCATTGGTTGTTCCAGATCCAGTGTTTCTTCCTCTTGATTCTCATATTAGATGA

Protein sequence

MGKLSFKDSLKALEADVQHANTLALDCPRESDGACVQMRISYSPAAPFFLFLVQWTDCRLAGALGLLRIHVYVTYPDGKTTMSIYERKSSIREFYAVIFPSLLQLQKGITELEDRKQKEVCNSRYKRRDEVARGKLSEIDKEREKECGICMEVNSIVVLPHCNHSLCLKCYRDWRSRSQSCPFCRDSLKRVNSGDLWIYTDRNETIDLTSILQENRKRLFMYINKLPLVVPDPVFLPLDSHIR

Homology

[Close]

BLAST of Carg12425 vs. NCBI nr
Match: KAG6607303.1 (E3 ubiquitin-protein ligase AIRP2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7036982.1 RING finger protein-like protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 500.0 bits (1286), Expect = 1.2e-137
Identity = 243/243 (100.00%), Postives = 243/243 (100.00%), Query Frame = 0


Query: 1   MGKLSFKDSLKALEADVQHANTLALDCPRESDGACVQMRISYSPAAPFFLFLVQWTDCRL 60
           MGKLSFKDSLKALEADVQHANTLALDCPRESDGACVQMRISYSPAAPFFLFLVQWTDCRL
Sbjct: 1   MGKLSFKDSLKALEADVQHANTLALDCPRESDGACVQMRISYSPAAPFFLFLVQWTDCRL 60

Query: 61  AGALGLLRIHVYVTYPDGKTTMSIYERKSSIREFYAVIFPSLLQLQKGITELEDRKQKEV 120
           AGALGLLRIHVYVTYPDGKTTMSIYERKSSIREFYAVIFPSLLQLQKGITELEDRKQKEV
Sbjct: 61  AGALGLLRIHVYVTYPDGKTTMSIYERKSSIREFYAVIFPSLLQLQKGITELEDRKQKEV 120

Query: 121 CNSRYKRRDEVARGKLSEIDKEREKECGICMEVNSIVVLPHCNHSLCLKCYRDWRSRSQS 180
           CNSRYKRRDEVARGKLSEIDKEREKECGICMEVNSIVVLPHCNHSLCLKCYRDWRSRSQS
Sbjct: 121 CNSRYKRRDEVARGKLSEIDKEREKECGICMEVNSIVVLPHCNHSLCLKCYRDWRSRSQS 180

Query: 181 CPFCRDSLKRVNSGDLWIYTDRNETIDLTSILQENRKRLFMYINKLPLVVPDPVFLPLDS 240
           CPFCRDSLKRVNSGDLWIYTDRNETIDLTSILQENRKRLFMYINKLPLVVPDPVFLPLDS
Sbjct: 181 CPFCRDSLKRVNSGDLWIYTDRNETIDLTSILQENRKRLFMYINKLPLVVPDPVFLPLDS 240

Query: 241 HIR 244
           HIR
Sbjct: 241 HIR 243

[Close]

BLAST of Carg12425 vs. NCBI nr
Match: XP_022948775.1 (uncharacterized protein LOC111452344 [Cucurbita moschata])

HSP 1 Score: 493.4 bits (1269), Expect = 1.1e-135
Identity = 240/243 (98.77%), Postives = 241/243 (99.18%), Query Frame = 0


Query: 1   MGKLSFKDSLKALEADVQHANTLALDCPRESDGACVQMRISYSPAAPFFLFLVQWTDCRL 60
           MGKLSFKDSLKALEADVQHANTLALDCPRESDGACVQMRISYSPAAPFFLFLVQWTDCRL
Sbjct: 1   MGKLSFKDSLKALEADVQHANTLALDCPRESDGACVQMRISYSPAAPFFLFLVQWTDCRL 60

Query: 61  AGALGLLRIHVYVTYPDGKTTMSIYERKSSIREFYAVIFPSLLQLQKGITELEDRKQKEV 120
           AGALGLLRIHVYVTYPDGKTTMSIYERKSSIREFY VIFPSLLQLQKGITELEDRKQKEV
Sbjct: 61  AGALGLLRIHVYVTYPDGKTTMSIYERKSSIREFYVVIFPSLLQLQKGITELEDRKQKEV 120

Query: 121 CNSRYKRRDEVARGKLSEIDKEREKECGICMEVNSIVVLPHCNHSLCLKCYRDWRSRSQS 180
           CNSRYKRRDEVARGKLSEIDKEREKECGICMEVNSIVVLPHC HSLCLKCYRDWRSRSQS
Sbjct: 121 CNSRYKRRDEVARGKLSEIDKEREKECGICMEVNSIVVLPHCIHSLCLKCYRDWRSRSQS 180

Query: 181 CPFCRDSLKRVNSGDLWIYTDRNETIDLTSILQENRKRLFMYINKLPLVVPDPVFLPLDS 240
           CPFCRDSLKRVNSGDLWIYTDRNETIDLTSILQEN+KRLFMYINKLPLVVPDPVFLPLDS
Sbjct: 181 CPFCRDSLKRVNSGDLWIYTDRNETIDLTSILQENQKRLFMYINKLPLVVPDPVFLPLDS 240

Query: 241 HIR 244
           HIR
Sbjct: 241 HIR 243

[Close]

BLAST of Carg12425 vs. NCBI nr
Match: XP_023525243.1 (uncharacterized protein LOC111788903 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 491.9 bits (1265), Expect = 3.2e-135
Identity = 237/243 (97.53%), Postives = 240/243 (98.77%), Query Frame = 0


Query: 1   MGKLSFKDSLKALEADVQHANTLALDCPRESDGACVQMRISYSPAAPFFLFLVQWTDCRL 60
           MGKLSFKDSLKALEADVQHANTLALDCPRESDGACVQMRISYSPAAPFFLFLVQWTDCRL
Sbjct: 1   MGKLSFKDSLKALEADVQHANTLALDCPRESDGACVQMRISYSPAAPFFLFLVQWTDCRL 60

Query: 61  AGALGLLRIHVYVTYPDGKTTMSIYERKSSIREFYAVIFPSLLQLQKGITELEDRKQKEV 120
           AGALGLLRIH++VTYPDGKTTMSIYERKSSIREFY VIFPSLLQLQKGITELEDRKQKEV
Sbjct: 61  AGALGLLRIHIFVTYPDGKTTMSIYERKSSIREFYVVIFPSLLQLQKGITELEDRKQKEV 120

Query: 121 CNSRYKRRDEVARGKLSEIDKEREKECGICMEVNSIVVLPHCNHSLCLKCYRDWRSRSQS 180
           CN+RYKRRDE  RGKLSEIDKEREKECGICMEVNSIVVLPHCNHSLCLKCYRDWRSRSQS
Sbjct: 121 CNARYKRRDEFVRGKLSEIDKEREKECGICMEVNSIVVLPHCNHSLCLKCYRDWRSRSQS 180

Query: 181 CPFCRDSLKRVNSGDLWIYTDRNETIDLTSILQENRKRLFMYINKLPLVVPDPVFLPLDS 240
           CPFCRDSLKRVNSGDLWIYTDRNETIDLTSILQENRKRLFMYINKLPLVVPDPVFLPLDS
Sbjct: 181 CPFCRDSLKRVNSGDLWIYTDRNETIDLTSILQENRKRLFMYINKLPLVVPDPVFLPLDS 240

Query: 241 HIR 244
           HIR
Sbjct: 241 HIR 243

[Close]

BLAST of Carg12425 vs. NCBI nr
Match: XP_022998735.1 (uncharacterized protein LOC111493310 isoform X1 [Cucurbita maxima])

HSP 1 Score: 491.5 bits (1264), Expect = 4.2e-135
Identity = 237/243 (97.53%), Postives = 239/243 (98.35%), Query Frame = 0


Query: 1   MGKLSFKDSLKALEADVQHANTLALDCPRESDGACVQMRISYSPAAPFFLFLVQWTDCRL 60
           MGKLSFKDSLKALEADVQHANTLALDCPRESDGACVQMRISYSPAAPFFLFLVQWTDC L
Sbjct: 1   MGKLSFKDSLKALEADVQHANTLALDCPRESDGACVQMRISYSPAAPFFLFLVQWTDCHL 60

Query: 61  AGALGLLRIHVYVTYPDGKTTMSIYERKSSIREFYAVIFPSLLQLQKGITELEDRKQKEV 120
           AGALGLLRIH+YVTYPDGKTTMSIYERKSSIREFY VIFPSLLQLQKGITELEDRKQKEV
Sbjct: 61  AGALGLLRIHIYVTYPDGKTTMSIYERKSSIREFYVVIFPSLLQLQKGITELEDRKQKEV 120

Query: 121 CNSRYKRRDEVARGKLSEIDKEREKECGICMEVNSIVVLPHCNHSLCLKCYRDWRSRSQS 180
           CN+RYKRRDE  RGKLSEIDKEREKECGICMEVNSIVVLPHCNHSLCLKCYRDWRSRSQS
Sbjct: 121 CNARYKRRDEFVRGKLSEIDKEREKECGICMEVNSIVVLPHCNHSLCLKCYRDWRSRSQS 180

Query: 181 CPFCRDSLKRVNSGDLWIYTDRNETIDLTSILQENRKRLFMYINKLPLVVPDPVFLPLDS 240
           CPFCRDSLKRVNSGDLWIYTDRNETIDLTSILQENRKRLFMYINKLPLVVPDPVFLPLDS
Sbjct: 181 CPFCRDSLKRVNSGDLWIYTDRNETIDLTSILQENRKRLFMYINKLPLVVPDPVFLPLDS 240

Query: 241 HIR 244
           HIR
Sbjct: 241 HIR 243

[Close]

BLAST of Carg12425 vs. NCBI nr
Match: XP_022965010.1 (E3 ubiquitin-protein ligase rnf8-B-like [Cucurbita moschata])

HSP 1 Score: 456.8 bits (1174), Expect = 1.1e-124
Identity = 217/243 (89.30%), Postives = 234/243 (96.30%), Query Frame = 0


Query: 1   MGKLSFKDSLKALEADVQHANTLALDCPRESDGACVQMRISYSPAAPFFLFLVQWTDCRL 60
           MGKLSFKDSLKALEADVQ+ANTLALDCPRESDGACVQMR+SYSPAAPFFLFLVQWTDC L
Sbjct: 1   MGKLSFKDSLKALEADVQYANTLALDCPRESDGACVQMRLSYSPAAPFFLFLVQWTDCYL 60

Query: 61  AGALGLLRIHVYVTYPDGKTTMSIYERKSSIREFYAVIFPSLLQLQKGITELEDRKQKEV 120
           AGALGLLRI +YVTYPDGKTTM+IYERK+SIREFY VIFPSLLQLQ+GITELEDRKQKEV
Sbjct: 61  AGALGLLRILIYVTYPDGKTTMAIYERKASIREFYVVIFPSLLQLQRGITELEDRKQKEV 120

Query: 121 CNSRYKRRDEVARGKLSEIDKEREKECGICMEVNSIVVLPHCNHSLCLKCYRDWRSRSQS 180
           CN+RYKRRDE+ RGKLSEID EREKECGICME+N++VVLP+CNHSLCL CYRDWR+RSQS
Sbjct: 121 CNARYKRRDEIGRGKLSEIDIEREKECGICMEINTMVVLPNCNHSLCLMCYRDWRNRSQS 180

Query: 181 CPFCRDSLKRVNSGDLWIYTDRNETIDLTSILQENRKRLFMYINKLPLVVPDPVFLPLDS 240
           CPFCRDSLKRVNSGDLWI+TD++E IDLTSILQ+NRKRLF YI KLPLVVPDPVFLPLDS
Sbjct: 181 CPFCRDSLKRVNSGDLWIFTDKSEMIDLTSILQDNRKRLFAYIEKLPLVVPDPVFLPLDS 240

Query: 241 HIR 244
           HIR
Sbjct: 241 HIR 243

[Close]

BLAST of Carg12425 vs. ExPASy Swiss-Prot
Match: Q9M022 (E3 ubiquitin-protein ligase AIRP2 OS=Arabidopsis thaliana OX=3702 GN=AIRP2 PE=1 SV=1)

HSP 1 Score: 339.7 bits (870), Expect = 2.7e-92
Identity = 160/233 (68.67%), Postives = 192/233 (82.40%), Query Frame = 0


Query: 5   SFKDSLKALEADVQHANTLALDCPRESDGACVQMRISYSPAAPFFLFLVQWTDCRLAGAL 64
           SFKDSLKALEAD+Q ANTLA + P E DG  VQMR+SYSPAA  FLFL+QWTDC  AGAL
Sbjct: 4   SFKDSLKALEADIQFANTLASEYPEEYDGGYVQMRLSYSPAAHLFLFLLQWTDCHFAGAL 63

Query: 65  GLLRIHVYVTYPDGKTTMSIYERKSSIREFYAVIFPSLLQLQKGITELEDRKQKEVCNSR 124
           GLLRI +Y  Y DGKTTMS++ERK+SIREFY V+FPSLLQL  GIT++E+RKQKE+C+ R
Sbjct: 64  GLLRILIYKAYVDGKTTMSLHERKTSIREFYDVLFPSLLQLHGGITDVEERKQKEICDKR 123

Query: 125 YKRRDEVARGKLSEIDKEREKECGICMEVNSIVVLPHCNHSLCLKCYRDWRSRSQSCPFC 184
           Y+++D   +GK+SEID ERE+ECGIC+E+ + VVLP CNHS+C+ CYR+WR+RSQSCPFC
Sbjct: 124 YRKKDRTDKGKMSEIDLEREEECGICLEIRNKVVLPTCNHSMCINCYRNWRARSQSCPFC 183

Query: 185 RDSLKRVNSGDLWIYTDRNETIDLTSILQENRKRLFMYINKLPLVVPDPVFLP 238
           R SLKRVNSGDLWIYT   E  DL +I +EN KRL +YI+KLPLV  DP  +P
Sbjct: 184 RGSLKRVNSGDLWIYTCSAEIADLPAIYKENLKRLLIYIDKLPLVTSDPNLVP 236

[Close]

BLAST of Carg12425 vs. ExPASy Swiss-Prot
Match: Q13434 (Putative E3 ubiquitin-protein ligase makorin-4 OS=Homo sapiens OX=9606 GN=MKRN4P PE=5 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 5.9e-07
Identity = 27/76 (35.53%), Postives = 39/76 (51.32%), Query Frame = 0


Query: 139 IDKEREKECGICMEV---------NSIVVLPHCNHSLCLKCYRDWRSRSQ-------SCP 198
           + + ++K CGICMEV         +   +L +CNH+ CLKC R WRS  +       SCP
Sbjct: 308 VQRSKDKVCGICMEVVYEKANPNEHRFGILSNCNHTFCLKCIRKWRSAKEFESRIVKSCP 367

[Close]

BLAST of Carg12425 vs. ExPASy Swiss-Prot
Match: Q13064 (Probable E3 ubiquitin-protein ligase makorin-3 OS=Homo sapiens OX=9606 GN=MKRN3 PE=1 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 1.7e-06
Identity = 27/76 (35.53%), Postives = 38/76 (50.00%), Query Frame = 0


Query: 139 IDKEREKECGICMEV---------NSIVVLPHCNHSLCLKCYRDWRSRSQ-------SCP 198
           + +  +K CGICMEV             +L +CNHS C++C R WRS  Q       SCP
Sbjct: 303 VQRGMDKVCGICMEVVYEKANPNDRRFGILSNCNHSFCIRCIRRWRSARQFENRIVKSCP 362

[Close]

BLAST of Carg12425 vs. ExPASy Swiss-Prot
Match: Q9UHC7 (E3 ubiquitin-protein ligase makorin-1 OS=Homo sapiens OX=9606 GN=MKRN1 PE=1 SV=3)

HSP 1 Score: 54.3 bits (129), Expect = 2.2e-06
Identity = 27/76 (35.53%), Postives = 37/76 (48.68%), Query Frame = 0


Query: 139 IDKEREKECGICMEV---------NSIVVLPHCNHSLCLKCYRDWRSRSQ-------SCP 198
           + + ++  CGICMEV             +L +CNH+ CLKC R WRS  Q       SCP
Sbjct: 273 VQRSKDMVCGICMEVVYEKANPSERRFGILSNCNHTYCLKCIRKWRSAKQFESKIIKSCP 332

[Close]

BLAST of Carg12425 vs. ExPASy Swiss-Prot
Match: Q9TT91 (E3 ubiquitin-protein ligase makorin-1 OS=Macropus eugenii OX=9315 GN=MKRN1 PE=2 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 2.2e-06
Identity = 27/76 (35.53%), Postives = 37/76 (48.68%), Query Frame = 0


Query: 139 IDKEREKECGICMEV---------NSIVVLPHCNHSLCLKCYRDWRSRSQ-------SCP 198
           + + ++  CGICMEV             +L +CNH+ CLKC R WRS  Q       SCP
Sbjct: 269 VQRSKDMVCGICMEVVYEKANPSERRFGILSNCNHTYCLKCIRKWRSAKQFESKIIKSCP 328

[Close]

BLAST of Carg12425 vs. ExPASy TrEMBL
Match: A0A6J1GAV0 (uncharacterized protein LOC111452344 OS=Cucurbita moschata OX=3662 GN=LOC111452344 PE=4 SV=1)

HSP 1 Score: 493.4 bits (1269), Expect = 5.3e-136
Identity = 240/243 (98.77%), Postives = 241/243 (99.18%), Query Frame = 0


Query: 1   MGKLSFKDSLKALEADVQHANTLALDCPRESDGACVQMRISYSPAAPFFLFLVQWTDCRL 60
           MGKLSFKDSLKALEADVQHANTLALDCPRESDGACVQMRISYSPAAPFFLFLVQWTDCRL
Sbjct: 1   MGKLSFKDSLKALEADVQHANTLALDCPRESDGACVQMRISYSPAAPFFLFLVQWTDCRL 60

Query: 61  AGALGLLRIHVYVTYPDGKTTMSIYERKSSIREFYAVIFPSLLQLQKGITELEDRKQKEV 120
           AGALGLLRIHVYVTYPDGKTTMSIYERKSSIREFY VIFPSLLQLQKGITELEDRKQKEV
Sbjct: 61  AGALGLLRIHVYVTYPDGKTTMSIYERKSSIREFYVVIFPSLLQLQKGITELEDRKQKEV 120

Query: 121 CNSRYKRRDEVARGKLSEIDKEREKECGICMEVNSIVVLPHCNHSLCLKCYRDWRSRSQS 180
           CNSRYKRRDEVARGKLSEIDKEREKECGICMEVNSIVVLPHC HSLCLKCYRDWRSRSQS
Sbjct: 121 CNSRYKRRDEVARGKLSEIDKEREKECGICMEVNSIVVLPHCIHSLCLKCYRDWRSRSQS 180

Query: 181 CPFCRDSLKRVNSGDLWIYTDRNETIDLTSILQENRKRLFMYINKLPLVVPDPVFLPLDS 240
           CPFCRDSLKRVNSGDLWIYTDRNETIDLTSILQEN+KRLFMYINKLPLVVPDPVFLPLDS
Sbjct: 181 CPFCRDSLKRVNSGDLWIYTDRNETIDLTSILQENQKRLFMYINKLPLVVPDPVFLPLDS 240

Query: 241 HIR 244
           HIR
Sbjct: 241 HIR 243

[Close]

BLAST of Carg12425 vs. ExPASy TrEMBL
Match: A0A6J1KDB1 (uncharacterized protein LOC111493310 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111493310 PE=4 SV=1)

HSP 1 Score: 491.5 bits (1264), Expect = 2.0e-135
Identity = 237/243 (97.53%), Postives = 239/243 (98.35%), Query Frame = 0


Query: 1   MGKLSFKDSLKALEADVQHANTLALDCPRESDGACVQMRISYSPAAPFFLFLVQWTDCRL 60
           MGKLSFKDSLKALEADVQHANTLALDCPRESDGACVQMRISYSPAAPFFLFLVQWTDC L
Sbjct: 1   MGKLSFKDSLKALEADVQHANTLALDCPRESDGACVQMRISYSPAAPFFLFLVQWTDCHL 60

Query: 61  AGALGLLRIHVYVTYPDGKTTMSIYERKSSIREFYAVIFPSLLQLQKGITELEDRKQKEV 120
           AGALGLLRIH+YVTYPDGKTTMSIYERKSSIREFY VIFPSLLQLQKGITELEDRKQKEV
Sbjct: 61  AGALGLLRIHIYVTYPDGKTTMSIYERKSSIREFYVVIFPSLLQLQKGITELEDRKQKEV 120

Query: 121 CNSRYKRRDEVARGKLSEIDKEREKECGICMEVNSIVVLPHCNHSLCLKCYRDWRSRSQS 180
           CN+RYKRRDE  RGKLSEIDKEREKECGICMEVNSIVVLPHCNHSLCLKCYRDWRSRSQS
Sbjct: 121 CNARYKRRDEFVRGKLSEIDKEREKECGICMEVNSIVVLPHCNHSLCLKCYRDWRSRSQS 180

Query: 181 CPFCRDSLKRVNSGDLWIYTDRNETIDLTSILQENRKRLFMYINKLPLVVPDPVFLPLDS 240
           CPFCRDSLKRVNSGDLWIYTDRNETIDLTSILQENRKRLFMYINKLPLVVPDPVFLPLDS
Sbjct: 181 CPFCRDSLKRVNSGDLWIYTDRNETIDLTSILQENRKRLFMYINKLPLVVPDPVFLPLDS 240

Query: 241 HIR 244
           HIR
Sbjct: 241 HIR 243

[Close]

BLAST of Carg12425 vs. ExPASy TrEMBL
Match: A0A6J1HMH6 (E3 ubiquitin-protein ligase rnf8-B-like OS=Cucurbita moschata OX=3662 GN=LOC111464952 PE=4 SV=1)

HSP 1 Score: 456.8 bits (1174), Expect = 5.5e-125
Identity = 217/243 (89.30%), Postives = 234/243 (96.30%), Query Frame = 0


Query: 1   MGKLSFKDSLKALEADVQHANTLALDCPRESDGACVQMRISYSPAAPFFLFLVQWTDCRL 60
           MGKLSFKDSLKALEADVQ+ANTLALDCPRESDGACVQMR+SYSPAAPFFLFLVQWTDC L
Sbjct: 1   MGKLSFKDSLKALEADVQYANTLALDCPRESDGACVQMRLSYSPAAPFFLFLVQWTDCYL 60

Query: 61  AGALGLLRIHVYVTYPDGKTTMSIYERKSSIREFYAVIFPSLLQLQKGITELEDRKQKEV 120
           AGALGLLRI +YVTYPDGKTTM+IYERK+SIREFY VIFPSLLQLQ+GITELEDRKQKEV
Sbjct: 61  AGALGLLRILIYVTYPDGKTTMAIYERKASIREFYVVIFPSLLQLQRGITELEDRKQKEV 120

Query: 121 CNSRYKRRDEVARGKLSEIDKEREKECGICMEVNSIVVLPHCNHSLCLKCYRDWRSRSQS 180
           CN+RYKRRDE+ RGKLSEID EREKECGICME+N++VVLP+CNHSLCL CYRDWR+RSQS
Sbjct: 121 CNARYKRRDEIGRGKLSEIDIEREKECGICMEINTMVVLPNCNHSLCLMCYRDWRNRSQS 180

Query: 181 CPFCRDSLKRVNSGDLWIYTDRNETIDLTSILQENRKRLFMYINKLPLVVPDPVFLPLDS 240
           CPFCRDSLKRVNSGDLWI+TD++E IDLTSILQ+NRKRLF YI KLPLVVPDPVFLPLDS
Sbjct: 181 CPFCRDSLKRVNSGDLWIFTDKSEMIDLTSILQDNRKRLFAYIEKLPLVVPDPVFLPLDS 240

Query: 241 HIR 244
           HIR
Sbjct: 241 HIR 243

[Close]

BLAST of Carg12425 vs. ExPASy TrEMBL
Match: A0A6J1I3Y6 (E3 ubiquitin-protein ligase rnf8-A-like OS=Cucurbita maxima OX=3661 GN=LOC111469447 PE=4 SV=1)

HSP 1 Score: 454.9 bits (1169), Expect = 2.1e-124
Identity = 216/243 (88.89%), Postives = 233/243 (95.88%), Query Frame = 0


Query: 1   MGKLSFKDSLKALEADVQHANTLALDCPRESDGACVQMRISYSPAAPFFLFLVQWTDCRL 60
           MGKLSFKDSLKALEADVQ+ANTLALDCPRESDGACVQMR+SYSPAAPFFLFLVQWTDC L
Sbjct: 1   MGKLSFKDSLKALEADVQYANTLALDCPRESDGACVQMRLSYSPAAPFFLFLVQWTDCYL 60

Query: 61  AGALGLLRIHVYVTYPDGKTTMSIYERKSSIREFYAVIFPSLLQLQKGITELEDRKQKEV 120
           AGALGLLRI +YVTYPDGKTTM+IYERK+SIREFY VIFPSLLQLQ+GITELEDRKQKEV
Sbjct: 61  AGALGLLRILIYVTYPDGKTTMAIYERKASIREFYVVIFPSLLQLQRGITELEDRKQKEV 120

Query: 121 CNSRYKRRDEVARGKLSEIDKEREKECGICMEVNSIVVLPHCNHSLCLKCYRDWRSRSQS 180
           CN+RYKRRDE  RGKLSEID EREKECGICME+N++VVLP+CNHSLCL CYRDWR+RSQS
Sbjct: 121 CNARYKRRDEFGRGKLSEIDIEREKECGICMEINTMVVLPNCNHSLCLMCYRDWRNRSQS 180

Query: 181 CPFCRDSLKRVNSGDLWIYTDRNETIDLTSILQENRKRLFMYINKLPLVVPDPVFLPLDS 240
           CPFCRDSLKRVNSGDLWI+TD++E +DLTSILQ+NRKRLF YI KLPLVVPDPVFLPLDS
Sbjct: 181 CPFCRDSLKRVNSGDLWIFTDKSEMVDLTSILQDNRKRLFTYIEKLPLVVPDPVFLPLDS 240

Query: 241 HIR 244
           HIR
Sbjct: 241 HIR 243

[Close]

BLAST of Carg12425 vs. ExPASy TrEMBL
Match: A0A0A0LY84 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G530140 PE=4 SV=1)

HSP 1 Score: 453.8 bits (1166), Expect = 4.7e-124
Identity = 217/243 (89.30%), Postives = 229/243 (94.24%), Query Frame = 0


Query: 1   MGKLSFKDSLKALEADVQHANTLALDCPRESDGACVQMRISYSPAAPFFLFLVQWTDCRL 60
           MGKLSFKDSLKALEADVQHANTLALDCPRESDGACVQMR+SYSPAAPFFLFLVQWTDC L
Sbjct: 1   MGKLSFKDSLKALEADVQHANTLALDCPRESDGACVQMRLSYSPAAPFFLFLVQWTDCYL 60

Query: 61  AGALGLLRIHVYVTYPDGKTTMSIYERKSSIREFYAVIFPSLLQLQKGITELEDRKQKEV 120
           AGALGLLRI +YVTYPDGKTTMSIYERK+SIREFY VIFPSLLQLQKGITELEDRKQKEV
Sbjct: 61  AGALGLLRILIYVTYPDGKTTMSIYERKASIREFYVVIFPSLLQLQKGITELEDRKQKEV 120

Query: 121 CNSRYKRRDEVARGKLSEIDKEREKECGICMEVNSIVVLPHCNHSLCLKCYRDWRSRSQS 180
           CN+RY RRDE  RGKLSEID EREKECGICME N +VVLP+CNHSLCLKCYRDWR RSQS
Sbjct: 121 CNARYSRRDEFGRGKLSEIDIEREKECGICMEFNGMVVLPNCNHSLCLKCYRDWRGRSQS 180

Query: 181 CPFCRDSLKRVNSGDLWIYTDRNETIDLTSILQENRKRLFMYINKLPLVVPDPVFLPLDS 240
           CPFCRDSLKRVNSGDLWI+TD++E IDL SIL +NRKRLF YI+KLPLVVPDPVFLP+DS
Sbjct: 181 CPFCRDSLKRVNSGDLWIFTDKSEMIDLNSILHDNRKRLFAYIDKLPLVVPDPVFLPMDS 240

Query: 241 HIR 244
           HIR
Sbjct: 241 HIR 243

[Close]

BLAST of Carg12425 vs. TAIR 10
Match: AT3G47160.1 (RING/U-box superfamily protein )

HSP 1 Score: 376.7 bits (966), Expect = 1.4e-104
Identity = 174/245 (71.02%), Postives = 214/245 (87.35%), Query Frame = 0


Query: 1   MGKLSFKDSLKALEADVQHANTLALDCPRESDGACVQMRISYSPAAPFFLFLVQWTDCRL 60
           M K+SFKDSLKALEAD+QHANT+ALD PRE DGA VQMR+SY+PAA F LFLVQWTDC L
Sbjct: 1   MAKVSFKDSLKALEADIQHANTVALDYPREKDGARVQMRLSYTPAAQFLLFLVQWTDCHL 60

Query: 61  AGALGLLRIHVYVTYPDGKTTMSIYERKSSIREFYAVIFPSLLQLQKGITELEDRKQKEV 120
           AG LGLLR+ +Y+TY DGKTTMS+YERK+SI++FYAVIFPSLLQL++GIT+L+DRKQKEV
Sbjct: 61  AGTLGLLRVLIYMTYADGKTTMSVYERKTSIKDFYAVIFPSLLQLERGITDLDDRKQKEV 120

Query: 121 CNSRYKRRDEVARGKLSEIDKEREKECGICMEVNSIVVLPHCNHSLCLKCYRDWRSRSQS 180
           C  RY+ +DE  + KLSEID ERE+ECGICME+N++VVLP+C HSLC+KCYRDW  RS+S
Sbjct: 121 CKIRYRNKDETEKVKLSEIDIEREEECGICMEMNNMVVLPNCTHSLCIKCYRDWHGRSES 180

Query: 181 CPFCRDSLKRVNSGDLWIYTDRNETIDLTSILQENRKRLFMYINKLPLVVPDPVFL--PL 240
           CPFCRDSLKRVNSGDLW+  ++++T+++ +I +EN+KRLF+YI KLPLVVPD VF   P 
Sbjct: 181 CPFCRDSLKRVNSGDLWMLMEKSDTVNMYTIERENKKRLFVYIEKLPLVVPDQVFASSPY 240

Query: 241 DSHIR 244
           D H++
Sbjct: 241 DCHVK 245

[Close]

BLAST of Carg12425 vs. TAIR 10
Match: AT5G58787.1 (RING/U-box superfamily protein )

HSP 1 Score: 376.3 bits (965), Expect = 1.8e-104
Identity = 178/245 (72.65%), Postives = 213/245 (86.94%), Query Frame = 0


Query: 1   MGKLSFKDSLKALEADVQHANTLALDCPRESDGACVQMRISYSPAAPFFLFLVQWTDCRL 60
           M KLSFKDSLKALEAD+QHANTLALD PRE DGA VQMR+SYSP A FFLFLVQWTDC+L
Sbjct: 1   MAKLSFKDSLKALEADIQHANTLALDYPREKDGARVQMRLSYSPTAQFFLFLVQWTDCKL 60

Query: 61  AGALGLLRIHVYVTYPDGKTTMSIYERKSSIREFYAVIFPSLLQLQKGITELEDRKQKEV 120
           AG LGLLR+ +Y+TY DGKTTMS+YERK+SIREF AVI PSL QLQ+G+T+++D KQKEV
Sbjct: 61  AGFLGLLRVLIYMTYADGKTTMSVYERKASIREFQAVILPSLSQLQRGVTDIDDSKQKEV 120

Query: 121 CNSRYKRRDEVARGKLSEIDKEREKECGICMEVNSIVVLPHCNHSLCLKCYRDWRSRSQS 180
           C  RY+++DE    ++SEI+ ERE+ECGICME+NS VVLP+C HSLC+KCYRDWR RSQS
Sbjct: 121 CKMRYRKKDE---SEMSEIEIEREEECGICMEMNSKVVLPNCTHSLCIKCYRDWRGRSQS 180

Query: 181 CPFCRDSLKRVNSGDLWIYTDRNETIDLTSILQENRKRLFMYINKLPLVVPDPVFL--PL 240
           CPFCRDSLKRV+SGDLW++ D+N+T++LT+I +EN+KRLFMYI KLPLVVPD V+   P 
Sbjct: 181 CPFCRDSLKRVDSGDLWMFLDQNDTVNLTAIARENQKRLFMYIEKLPLVVPDQVYASSPY 240

Query: 241 DSHIR 244
           D H+R
Sbjct: 241 DFHVR 242

[Close]

BLAST of Carg12425 vs. TAIR 10
Match: AT3G47160.2 (RING/U-box superfamily protein )

HSP 1 Score: 367.9 bits (943), Expect = 6.5e-102
Identity = 174/257 (67.70%), Postives = 214/257 (83.27%), Query Frame = 0


Query: 1   MGKLSFKDSLKALEADVQHANTL------------ALDCPRESDGACVQMRISYSPAAPF 60
           M K+SFKDSLKALEAD+QHANT+            ALD PRE DGA VQMR+SY+PAA F
Sbjct: 1   MAKVSFKDSLKALEADIQHANTVLSNELGDEVIFRALDYPREKDGARVQMRLSYTPAAQF 60

Query: 61  FLFLVQWTDCRLAGALGLLRIHVYVTYPDGKTTMSIYERKSSIREFYAVIFPSLLQLQKG 120
            LFLVQWTDC LAG LGLLR+ +Y+TY DGKTTMS+YERK+SI++FYAVIFPSLLQL++G
Sbjct: 61  LLFLVQWTDCHLAGTLGLLRVLIYMTYADGKTTMSVYERKTSIKDFYAVIFPSLLQLERG 120

Query: 121 ITELEDRKQKEVCNSRYKRRDEVARGKLSEIDKEREKECGICMEVNSIVVLPHCNHSLCL 180
           IT+L+DRKQKEVC  RY+ +DE  + KLSEID ERE+ECGICME+N++VVLP+C HSLC+
Sbjct: 121 ITDLDDRKQKEVCKIRYRNKDETEKVKLSEIDIEREEECGICMEMNNMVVLPNCTHSLCI 180

Query: 181 KCYRDWRSRSQSCPFCRDSLKRVNSGDLWIYTDRNETIDLTSILQENRKRLFMYINKLPL 240
           KCYRDW  RS+SCPFCRDSLKRVNSGDLW+  ++++T+++ +I +EN+KRLF+YI KLPL
Sbjct: 181 KCYRDWHGRSESCPFCRDSLKRVNSGDLWMLMEKSDTVNMYTIERENKKRLFVYIEKLPL 240

Query: 241 VVPDPVFL--PLDSHIR 244
           VVPD VF   P D H++
Sbjct: 241 VVPDQVFASSPYDCHVK 257

[Close]

BLAST of Carg12425 vs. TAIR 10
Match: AT5G58787.2 (RING/U-box superfamily protein )

HSP 1 Score: 345.1 bits (884), Expect = 4.5e-95
Identity = 167/245 (68.16%), Postives = 200/245 (81.63%), Query Frame = 0


Query: 1   MGKLSFKDSLKALEADVQHANTLALDCPRESDGACVQMRISYSPAAPFFLFLVQWTDCRL 60
           M KLSFKDSLKALEAD+QHANTLALD PRE DGA VQMR+SYSP A FFLFLVQWTDC+L
Sbjct: 1   MAKLSFKDSLKALEADIQHANTLALDYPREKDGARVQMRLSYSPTAQFFLFLVQWTDCKL 60

Query: 61  AGALGLLRIHVYVTYPDGKTTMSIYERKSSIREFYAVIFPSLLQLQKGITELEDRKQKEV 120
           AG LGLLR+ +Y+TY DGKTTMS+YERK+SIREF                +++D KQKEV
Sbjct: 61  AGFLGLLRVLIYMTYADGKTTMSVYERKASIREF---------------QDIDDSKQKEV 120

Query: 121 CNSRYKRRDEVARGKLSEIDKEREKECGICMEVNSIVVLPHCNHSLCLKCYRDWRSRSQS 180
           C  RY+++DE    ++SEI+ ERE+ECGICME+NS VVLP+C HSLC+KCYRDWR RSQS
Sbjct: 121 CKMRYRKKDE---SEMSEIEIEREEECGICMEMNSKVVLPNCTHSLCIKCYRDWRGRSQS 180

Query: 181 CPFCRDSLKRVNSGDLWIYTDRNETIDLTSILQENRKRLFMYINKLPLVVPDPVFL--PL 240
           CPFCRDSLKRV+SGDLW++ D+N+T++LT+I +EN+KRLFMYI KLPLVVPD V+   P 
Sbjct: 181 CPFCRDSLKRVDSGDLWMFLDQNDTVNLTAIARENQKRLFMYIEKLPLVVPDQVYASSPY 227

Query: 241 DSHIR 244
           D H+R
Sbjct: 241 DFHVR 227

[Close]

BLAST of Carg12425 vs. TAIR 10
Match: AT5G01520.1 (RING/U-box superfamily protein )

HSP 1 Score: 339.7 bits (870), Expect = 1.9e-93
Identity = 160/233 (68.67%), Postives = 192/233 (82.40%), Query Frame = 0


Query: 5   SFKDSLKALEADVQHANTLALDCPRESDGACVQMRISYSPAAPFFLFLVQWTDCRLAGAL 64
           SFKDSLKALEAD+Q ANTLA + P E DG  VQMR+SYSPAA  FLFL+QWTDC  AGAL
Sbjct: 4   SFKDSLKALEADIQFANTLASEYPEEYDGGYVQMRLSYSPAAHLFLFLLQWTDCHFAGAL 63

Query: 65  GLLRIHVYVTYPDGKTTMSIYERKSSIREFYAVIFPSLLQLQKGITELEDRKQKEVCNSR 124
           GLLRI +Y  Y DGKTTMS++ERK+SIREFY V+FPSLLQL  GIT++E+RKQKE+C+ R
Sbjct: 64  GLLRILIYKAYVDGKTTMSLHERKTSIREFYDVLFPSLLQLHGGITDVEERKQKEICDKR 123

Query: 125 YKRRDEVARGKLSEIDKEREKECGICMEVNSIVVLPHCNHSLCLKCYRDWRSRSQSCPFC 184
           Y+++D   +GK+SEID ERE+ECGIC+E+ + VVLP CNHS+C+ CYR+WR+RSQSCPFC
Sbjct: 124 YRKKDRTDKGKMSEIDLEREEECGICLEIRNKVVLPTCNHSMCINCYRNWRARSQSCPFC 183

Query: 185 RDSLKRVNSGDLWIYTDRNETIDLTSILQENRKRLFMYINKLPLVVPDPVFLP 238
           R SLKRVNSGDLWIYT   E  DL +I +EN KRL +YI+KLPLV  DP  +P
Sbjct: 184 RGSLKRVNSGDLWIYTCSAEIADLPAIYKENLKRLLIYIDKLPLVTSDPNLVP 236

The following BLAST results are available for this feature:

BLAST of Carg12425 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6607303.1	1.2e-137	100.00	E3 ubiquitin-protein ligase AIRP2, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022948775.1	1.1e-135	98.77	uncharacterized protein LOC111452344 [Cucurbita moschata]	[more]
XP_023525243.1	3.2e-135	97.53	uncharacterized protein LOC111788903 [Cucurbita pepo subsp. pepo]	[more]
XP_022998735.1	4.2e-135	97.53	uncharacterized protein LOC111493310 isoform X1 [Cucurbita maxima]	[more]
XP_022965010.1	1.1e-124	89.30	E3 ubiquitin-protein ligase rnf8-B-like [Cucurbita moschata]	[more]

BLAST of Carg12425 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M022	2.7e-92	68.67	E3 ubiquitin-protein ligase AIRP2 OS=Arabidopsis thaliana OX=3702 GN=AIRP2 PE=1 ...	[more]
Q13434	5.9e-07	35.53	Putative E3 ubiquitin-protein ligase makorin-4 OS=Homo sapiens OX=9606 GN=MKRN4P...	[more]
Q13064	1.7e-06	35.53	Probable E3 ubiquitin-protein ligase makorin-3 OS=Homo sapiens OX=9606 GN=MKRN3 ...	[more]
Q9UHC7	2.2e-06	35.53	E3 ubiquitin-protein ligase makorin-1 OS=Homo sapiens OX=9606 GN=MKRN1 PE=1 SV=3	[more]
Q9TT91	2.2e-06	35.53	E3 ubiquitin-protein ligase makorin-1 OS=Macropus eugenii OX=9315 GN=MKRN1 PE=2 ...	[more]

BLAST of Carg12425 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GAV0	5.3e-136	98.77	uncharacterized protein LOC111452344 OS=Cucurbita moschata OX=3662 GN=LOC1114523...	[more]
A0A6J1KDB1	2.0e-135	97.53	uncharacterized protein LOC111493310 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1HMH6	5.5e-125	89.30	E3 ubiquitin-protein ligase rnf8-B-like OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]
A0A6J1I3Y6	2.1e-124	88.89	E3 ubiquitin-protein ligase rnf8-A-like OS=Cucurbita maxima OX=3661 GN=LOC111469...	[more]
A0A0A0LY84	4.7e-124	89.30	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G530140 P...	[more]

BLAST of Carg12425 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G47160.1	1.4e-104	71.02	RING/U-box superfamily protein	[more]
AT5G58787.1	1.8e-104	72.65	RING/U-box superfamily protein	[more]
AT3G47160.2	6.5e-102	67.70	RING/U-box superfamily protein	[more]
AT5G58787.2	4.5e-95	68.16	RING/U-box superfamily protein	[more]
AT5G01520.1	1.9e-93	68.67	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 147..184 e-value: 6.7E-7 score: 38.9
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 147..185 score: 11.972923
None	No IPR available	PFAM	PF13920	zf-C3HC4_3	coord: 144..190 e-value: 3.0E-9 score: 36.6
None	No IPR available	PANTHER	PTHR15315:SF75	RING/U-BOX SUPERFAMILY PROTEIN	coord: 1..243
None	No IPR available	PANTHER	PTHR15315	RING FINGER PROTEIN 41, 151	coord: 1..243
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 135..190
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 130..194 e-value: 7.3E-14 score: 52.7
IPR017907	Zinc finger, RING-type, conserved site	PROSITE	PS00518	ZF_RING_1	coord: 162..171

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg12425-RA	Carg12425-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0005829	cytosol
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0061630	ubiquitin protein ligase activity