Carg12410 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg12410
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Homeobox prospero protein
Location	Carg_Chr01: 3433047 .. 3435086 (+)
RNA-Seq Expression	Carg12410
Synteny	Carg12410

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTTCTTTTTTCCTCTCTAGAGTTCATATACCCAATTCCCATCCCGTGCGAAGAGAAGGCAATCGAAAAGACGCCGTGCAGTGTCTGCCGCGCTCGTCCTGCTCTCCGTTGTTGCGATTTAATTGCAAACCTGTTCCTTCGCCACTGCAACAAAGATACTGGAGGACGGGAATCGGATTCTTTAATCTCGATCGAGATCAACATTTTGGATTTCTCTTTGTTGTTTTTGGACTGTAAGCTATCCATCGCGCCGATTTTCAATTTTTCGTTTTGCTTCTTCTTCTATTGTTTCCGGATAAAATGGTGATATTTTTCTGAAATTGTTCAGTAGCTCTGTGATATTACTTAGAGTGTTAAGATTGCTACGAAATGAGACATCGCTGCGACGTTCTAGTTCTCTTATTTTAAACACTGTCAAGAGAAATCAATCTGCGAAGTTTGCGTTAAGAAATCTCCATGATTCGTAAACGCTTTCAAGAAGCTAAAACAGGTAAGTTACGAATAGTTTGTGCCTCATTTCTTCCATTTTTGGCTTTGATTTATGAGCTTGCCTCCTTACTGTTTGATAAATTGCTTGAAAGCAATATATATGTATATTGTTTATATATAGTTTTCTTGTACTGGAATCTCAGGCCTGCAACTGGTGAAATCGATGAGAGCCGAAAGGTTCTTGAAGAAAGTTGGATTGGGCAGAGAGGATCGTTACTTCTGGAAGCAAATTGGAAAGGCTCTGTTATTTTCGTATACTCTGATCGGCGTTGCATGGCTTTACAACGAAACATCACCATTTGGCTGGTGGACGCTGAAGCCACGGTCCAAGGCAGAGAAAGATTTGGCTCACCTCTATGAGCGTAGGGAGTTTCCATATCCAGGTTGTTAAATCTCCGCATAATACCCAAAAAATTTAAGTTGATTGAAAATGAAATTGAGCTGCTGTATAAATTTCACTGCTAGATGGAAAAAAAAATAGGGAAAAATTATAAAATCCACTTAGAACAATAAGGGTGTTGCAATTGTATTTCAAAACTTCTTTGCAATTAAACTACATCATTGTAACTTTGTGATGATTGAGTGTAGTGTAACAATTCTCATAGTTTATGTGTTCTAATGGTTGTTCTAAGTGGTTGGACCTTTTTCAACTTGCAACGAACAGAATTGTTGCAAAACTGTTCAATTGCAGCGAGTTCATCAGTTTGAGGATAATTGCTTGAATTTAAAGTTTGAGGGTGGGATTGTAATAACTAGATAAGGTCGTGAATTAAGCTGAATCTAATCATTATGATATAATTGTAAACCCAGGTGATGAAGAAGCTATGGAGGATTTCATTGCAAAGGGAGGAATGATCGGAACCGCCATCGGTCCAAAGGGGGTGATTGATTTTGATAAGGATTCTTTCAATTATCAGAAAGAATTAGAGAAAAATAAGCTCGAGCAAGAGGCCCAGAAGCTATGGTTCAGGATGAGGAACGAGGTCATTTCAGAGCTTCAGGGGAAGGGCTACGATGTTGAGTGAGGTAATTCTTGAATGGAAGCATGAAAATTTCTGATTGCTTAATTTGTGCATGTGTTTGTTCTTGTTGTGAAAGTTCTGAATATACCCATCTGCTTGAATGCTTCCTGTTTGATGCGTTTGCAGTCGTCTCTGTCATGTACTTGAATCTGAACACTAAAAGGATTAGTATTAGAGTTGAAAATTTCTGGCCTTTTGATATCAATCTCTATGGATTGGTTTTAAGTTTTAATCGATACTTGGTTCATCAATTCTCTCAAATGTTCTAACTTTTCACTAATGATCTTATGTATTCAAATTATTAACTTGCATCCAATTTCGAATGATTGTCTTTTCAATATAAAGTTCGAAAACGAAATACGATGTTTAAAAATATAAAGACTAAAATGAAACAATGTACGAAATCTTAAGGACTATCCCATGGCTCAATCCTTTTATTACCAATGTTTTTGTGAAAATTTGATGTTATCTCGGGAATGATGGAAATTTCTTAGTAGTATTATATAACTAGATTCTTGTTGAATATACT

mRNA sequence

TTTTCTTTTTTCCTCTCTAGAGTTCATATACCCAATTCCCATCCCGTGCGAAGAGAAGGCAATCGAAAAGACGCCGTGCAGTGTCTGCCGCGCTCGTCCTGCTCTCCGTTGTTGCGATTTAATTGCAAACCTGTTCCTTCGCCACTGCAACAAAGATACTGGAGGACGGGAATCGGATTCTTTAATCTCGATCGAGATCAACATTTTGGATTTCTCTTTGTTGTTTTTGGACTGTAAGCTATCCATCGCGCCGATTTTCAATTTTTCGTTTTGCTTCTTCTTCTATTGTTTCCGGATAAAATGGTGATATTTTTCTGAAATTGTTCAGTAGCTCTGTGATATTACTTAGAGTGTTAAGATTGCTACGAAATGAGACATCGCTGCGACGTTCTAGTTCTCTTATTTTAAACACTGTCAAGAGAAATCAATCTGCGAAGTTTGCGTTAAGAAATCTCCATGATTCGTAAACGCTTTCAAGAAGCTAAAACAGGCCTGCAACTGGTGAAATCGATGAGAGCCGAAAGGTTCTTGAAGAAAGTTGGATTGGGCAGAGAGGATCGTTACTTCTGGAAGCAAATTGGAAAGGCTCTGTTATTTTCGTATACTCTGATCGGCGTTGCATGGCTTTACAACGAAACATCACCATTTGGCTGGTGGACGCTGAAGCCACGGTCCAAGGCAGAGAAAGATTTGGCTCACCTCTATGAGCGTAGGGAGTTTCCATATCCAGGTGATGAAGAAGCTATGGAGGATTTCATTGCAAAGGGAGGAATGATCGGAACCGCCATCGGTCCAAAGGGGGTGATTGATTTTGATAAGGATTCTTTCAATTATCAGAAAGAATTAGAGAAAAATAAGCTCGAGCAAGAGGCCCAGAAGCTATGGTTCAGGATGAGGAACGAGGTCATTTCAGAGCTTCAGGGGAAGGGCTACGATGTTGAGTGAGGTAATTCTTGAATGGAAGCATGAAAATTTCTGATTGCTTAATTTGTGCATGTGTTTGTTCTTGTTGTGAAAGTTCTGAATATACCCATCTGCTTGAATGCTTCCTGTTTGATGCGTTTGCAGTCGTCTCTGTCATGTACTTGAATCTGAACACTAAAAGGATTAGTATTAGAGTTGAAAATTTCTGGCCTTTTGATATCAATCTCTATGGATTGGTTTTAAGTTTTAATCGATACTTGGTTCATCAATTCTCTCAAATGTTCTAACTTTTCACTAATGATCTTATGTATTCAAATTATTAACTTGCATCCAATTTCGAATGATTGTCTTTTCAATATAAAGTTCGAAAACGAAATACGATGTTTAAAAATATAAAGACTAAAATGAAACAATGTACGAAATCTTAAGGACTATCCCATGGCTCAATCCTTTTATTACCAATGTTTTTGTGAAAATTTGATGTTATCTCGGGAATGATGGAAATTTCTTAGTAGTATTATATAACTAGATTCTTGTTGAATATACT

Coding sequence (CDS)

ATGATTCGTAAACGCTTTCAAGAAGCTAAAACAGGCCTGCAACTGGTGAAATCGATGAGAGCCGAAAGGTTCTTGAAGAAAGTTGGATTGGGCAGAGAGGATCGTTACTTCTGGAAGCAAATTGGAAAGGCTCTGTTATTTTCGTATACTCTGATCGGCGTTGCATGGCTTTACAACGAAACATCACCATTTGGCTGGTGGACGCTGAAGCCACGGTCCAAGGCAGAGAAAGATTTGGCTCACCTCTATGAGCGTAGGGAGTTTCCATATCCAGGTGATGAAGAAGCTATGGAGGATTTCATTGCAAAGGGAGGAATGATCGGAACCGCCATCGGTCCAAAGGGGGTGATTGATTTTGATAAGGATTCTTTCAATTATCAGAAAGAATTAGAGAAAAATAAGCTCGAGCAAGAGGCCCAGAAGCTATGGTTCAGGATGAGGAACGAGGTCATTTCAGAGCTTCAGGGGAAGGGCTACGATGTTGAGTGA

Protein sequence

MIRKRFQEAKTGLQLVKSMRAERFLKKVGLGREDRYFWKQIGKALLFSYTLIGVAWLYNETSPFGWWTLKPRSKAEKDLAHLYERREFPYPGDEEAMEDFIAKGGMIGTAIGPKGVIDFDKDSFNYQKELEKNKLEQEAQKLWFRMRNEVISELQGKGYDVE

Homology

[Close]

BLAST of Carg12410 vs. NCBI nr
Match: XP_022948350.1 (uncharacterized protein LOC111452054 [Cucurbita moschata] >XP_022948351.1 uncharacterized protein LOC111452054 [Cucurbita moschata] >XP_022948352.1 uncharacterized protein LOC111452054 [Cucurbita moschata] >KAG6607290.1 hypothetical protein SDJN03_00632, partial [Cucurbita argyrosperma subsp. sororia] >KAG7036967.1 hypothetical protein SDJN02_00587 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 332.8 bits (852), Expect = 1.7e-87
Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0


Query: 1   MIRKRFQEAKTGLQLVKSMRAERFLKKVGLGREDRYFWKQIGKALLFSYTLIGVAWLYNE 60
           MIRKRFQEAKTGLQLVKSMRAERFLKKVGLGREDRYFWKQIGKALLFSYTLIGVAWLYNE
Sbjct: 1   MIRKRFQEAKTGLQLVKSMRAERFLKKVGLGREDRYFWKQIGKALLFSYTLIGVAWLYNE 60

Query: 61  TSPFGWWTLKPRSKAEKDLAHLYERREFPYPGDEEAMEDFIAKGGMIGTAIGPKGVIDFD 120
           TSPFGWWTLKPRSKAEKDLAHLYERREFPYPGDEEAMEDFIAKGGMIGTAIGPKGVIDFD
Sbjct: 61  TSPFGWWTLKPRSKAEKDLAHLYERREFPYPGDEEAMEDFIAKGGMIGTAIGPKGVIDFD 120

Query: 121 KDSFNYQKELEKNKLEQEAQKLWFRMRNEVISELQGKGYDVE 163
           KDSFNYQKELEKNKLEQEAQKLWFRMRNEVISELQGKGYDVE
Sbjct: 121 KDSFNYQKELEKNKLEQEAQKLWFRMRNEVISELQGKGYDVE 162

[Close]

BLAST of Carg12410 vs. NCBI nr
Match: XP_022998684.1 (uncharacterized protein LOC111493271 [Cucurbita maxima] >XP_022998685.1 uncharacterized protein LOC111493271 [Cucurbita maxima] >XP_022998686.1 uncharacterized protein LOC111493271 [Cucurbita maxima])

HSP 1 Score: 330.9 bits (847), Expect = 6.3e-87
Identity = 161/162 (99.38%), Postives = 161/162 (99.38%), Query Frame = 0


Query: 1   MIRKRFQEAKTGLQLVKSMRAERFLKKVGLGREDRYFWKQIGKALLFSYTLIGVAWLYNE 60
           MIRKRFQEAKTGLQLVKSMRAERFLKKVGLGREDRYFWKQIGKALLFSYTLIGVAWLYNE
Sbjct: 1   MIRKRFQEAKTGLQLVKSMRAERFLKKVGLGREDRYFWKQIGKALLFSYTLIGVAWLYNE 60

Query: 61  TSPFGWWTLKPRSKAEKDLAHLYERREFPYPGDEEAMEDFIAKGGMIGTAIGPKGVIDFD 120
           TSPFGWWTLKPRSKAEKDLAHLYERREFPYPGDEEAMEDFIAKGGMIGTAIGPKGVIDFD
Sbjct: 61  TSPFGWWTLKPRSKAEKDLAHLYERREFPYPGDEEAMEDFIAKGGMIGTAIGPKGVIDFD 120

Query: 121 KDSFNYQKELEKNKLEQEAQKLWFRMRNEVISELQGKGYDVE 163
           KDSFNYQKELE NKLEQEAQKLWFRMRNEVISELQGKGYDVE
Sbjct: 121 KDSFNYQKELENNKLEQEAQKLWFRMRNEVISELQGKGYDVE 162

[Close]

BLAST of Carg12410 vs. NCBI nr
Match: XP_023523491.1 (uncharacterized protein LOC111787692 [Cucurbita pepo subsp. pepo] >XP_023523492.1 uncharacterized protein LOC111787692 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 328.6 bits (841), Expect = 3.1e-86
Identity = 159/162 (98.15%), Postives = 161/162 (99.38%), Query Frame = 0


Query: 1   MIRKRFQEAKTGLQLVKSMRAERFLKKVGLGREDRYFWKQIGKALLFSYTLIGVAWLYNE 60
           MIRKRFQEAKTGLQLVKSMRAERFLKKVGLGREDRYFWKQIGKALLFSYTLIGVAWLYNE
Sbjct: 1   MIRKRFQEAKTGLQLVKSMRAERFLKKVGLGREDRYFWKQIGKALLFSYTLIGVAWLYNE 60

Query: 61  TSPFGWWTLKPRSKAEKDLAHLYERREFPYPGDEEAMEDFIAKGGMIGTAIGPKGVIDFD 120
           TSPFGWWTLKPRS+AEKDLAHLYERREFPYPGDEEAMEDFI+KGGMIGTAIGPKGVIDFD
Sbjct: 61  TSPFGWWTLKPRSRAEKDLAHLYERREFPYPGDEEAMEDFISKGGMIGTAIGPKGVIDFD 120

Query: 121 KDSFNYQKELEKNKLEQEAQKLWFRMRNEVISELQGKGYDVE 163
           KDSFNYQKELE NKLEQEAQKLWFRMRNEVISELQGKGYDVE
Sbjct: 121 KDSFNYQKELENNKLEQEAQKLWFRMRNEVISELQGKGYDVE 162

[Close]

BLAST of Carg12410 vs. NCBI nr
Match: XP_004154327.1 (uncharacterized protein LOC101221969 isoform X1 [Cucumis sativus] >XP_011658438.1 uncharacterized protein LOC101221969 isoform X1 [Cucumis sativus] >KGN65782.1 hypothetical protein Csa_023340 [Cucumis sativus])

HSP 1 Score: 313.9 bits (803), Expect = 8.0e-82
Identity = 149/162 (91.98%), Postives = 157/162 (96.91%), Query Frame = 0


Query: 1   MIRKRFQEAKTGLQLVKSMRAERFLKKVGLGREDRYFWKQIGKALLFSYTLIGVAWLYNE 60
           MIRKRFQEAKTG+QL+KSMRAERFLKKVGLGREDRYFWKQ+GKALL +YTLIGVAWLYNE
Sbjct: 1   MIRKRFQEAKTGMQLMKSMRAERFLKKVGLGREDRYFWKQVGKALLCTYTLIGVAWLYNE 60

Query: 61  TSPFGWWTLKPRSKAEKDLAHLYERREFPYPGDEEAMEDFIAKGGMIGTAIGPKGVIDFD 120
           TSPFGWWTLKPRSKAEKDLAHLYERREFPYPGDEEAMEDFI KGGMIGTAIGPKG++DFD
Sbjct: 61  TSPFGWWTLKPRSKAEKDLAHLYERREFPYPGDEEAMEDFIVKGGMIGTAIGPKGILDFD 120

Query: 121 KDSFNYQKELEKNKLEQEAQKLWFRMRNEVISELQGKGYDVE 163
           KDS+NYQKEL+  KLEQEAQKLWFRMRNEVISELQ KGYDVE
Sbjct: 121 KDSYNYQKELQNTKLEQEAQKLWFRMRNEVISELQEKGYDVE 162

[Close]

BLAST of Carg12410 vs. NCBI nr
Match: XP_038895441.1 (uncharacterized protein LOC120083675 [Benincasa hispida] >XP_038895442.1 uncharacterized protein LOC120083675 [Benincasa hispida])

HSP 1 Score: 313.5 bits (802), Expect = 1.0e-81
Identity = 150/162 (92.59%), Postives = 158/162 (97.53%), Query Frame = 0


Query: 1   MIRKRFQEAKTGLQLVKSMRAERFLKKVGLGREDRYFWKQIGKALLFSYTLIGVAWLYNE 60
           MIRKRFQEAKTG+QLVKS+RAERFLKKVGLGREDRYFWKQIGKALL +YTLIGVAWLYNE
Sbjct: 1   MIRKRFQEAKTGMQLVKSLRAERFLKKVGLGREDRYFWKQIGKALLCTYTLIGVAWLYNE 60

Query: 61  TSPFGWWTLKPRSKAEKDLAHLYERREFPYPGDEEAMEDFIAKGGMIGTAIGPKGVIDFD 120
           TSPFGWWTLKPRSKAEKDLAHLYERREFPYPGDEEAME+FIAKGGMIGTAIGPKG++DFD
Sbjct: 61  TSPFGWWTLKPRSKAEKDLAHLYERREFPYPGDEEAMEEFIAKGGMIGTAIGPKGMLDFD 120

Query: 121 KDSFNYQKELEKNKLEQEAQKLWFRMRNEVISELQGKGYDVE 163
           KDS+NYQKEL+  KLEQEAQKLWFRMRNEVISELQ KGYDVE
Sbjct: 121 KDSYNYQKELQNKKLEQEAQKLWFRMRNEVISELQEKGYDVE 162

[Close]

BLAST of Carg12410 vs. ExPASy TrEMBL
Match: A0A6J1G9K9 (uncharacterized protein LOC111452054 OS=Cucurbita moschata OX=3662 GN=LOC111452054 PE=4 SV=1)

HSP 1 Score: 332.8 bits (852), Expect = 8.0e-88
Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0


Query: 1   MIRKRFQEAKTGLQLVKSMRAERFLKKVGLGREDRYFWKQIGKALLFSYTLIGVAWLYNE 60
           MIRKRFQEAKTGLQLVKSMRAERFLKKVGLGREDRYFWKQIGKALLFSYTLIGVAWLYNE
Sbjct: 1   MIRKRFQEAKTGLQLVKSMRAERFLKKVGLGREDRYFWKQIGKALLFSYTLIGVAWLYNE 60

Query: 61  TSPFGWWTLKPRSKAEKDLAHLYERREFPYPGDEEAMEDFIAKGGMIGTAIGPKGVIDFD 120
           TSPFGWWTLKPRSKAEKDLAHLYERREFPYPGDEEAMEDFIAKGGMIGTAIGPKGVIDFD
Sbjct: 61  TSPFGWWTLKPRSKAEKDLAHLYERREFPYPGDEEAMEDFIAKGGMIGTAIGPKGVIDFD 120

Query: 121 KDSFNYQKELEKNKLEQEAQKLWFRMRNEVISELQGKGYDVE 163
           KDSFNYQKELEKNKLEQEAQKLWFRMRNEVISELQGKGYDVE
Sbjct: 121 KDSFNYQKELEKNKLEQEAQKLWFRMRNEVISELQGKGYDVE 162

[Close]

BLAST of Carg12410 vs. ExPASy TrEMBL
Match: A0A6J1KD63 (uncharacterized protein LOC111493271 OS=Cucurbita maxima OX=3661 GN=LOC111493271 PE=4 SV=1)

HSP 1 Score: 330.9 bits (847), Expect = 3.0e-87
Identity = 161/162 (99.38%), Postives = 161/162 (99.38%), Query Frame = 0


Query: 1   MIRKRFQEAKTGLQLVKSMRAERFLKKVGLGREDRYFWKQIGKALLFSYTLIGVAWLYNE 60
           MIRKRFQEAKTGLQLVKSMRAERFLKKVGLGREDRYFWKQIGKALLFSYTLIGVAWLYNE
Sbjct: 1   MIRKRFQEAKTGLQLVKSMRAERFLKKVGLGREDRYFWKQIGKALLFSYTLIGVAWLYNE 60

Query: 61  TSPFGWWTLKPRSKAEKDLAHLYERREFPYPGDEEAMEDFIAKGGMIGTAIGPKGVIDFD 120
           TSPFGWWTLKPRSKAEKDLAHLYERREFPYPGDEEAMEDFIAKGGMIGTAIGPKGVIDFD
Sbjct: 61  TSPFGWWTLKPRSKAEKDLAHLYERREFPYPGDEEAMEDFIAKGGMIGTAIGPKGVIDFD 120

Query: 121 KDSFNYQKELEKNKLEQEAQKLWFRMRNEVISELQGKGYDVE 163
           KDSFNYQKELE NKLEQEAQKLWFRMRNEVISELQGKGYDVE
Sbjct: 121 KDSFNYQKELENNKLEQEAQKLWFRMRNEVISELQGKGYDVE 162

[Close]

BLAST of Carg12410 vs. ExPASy TrEMBL
Match: A0A0A0LY68 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G528470 PE=4 SV=1)

HSP 1 Score: 313.9 bits (803), Expect = 3.9e-82
Identity = 149/162 (91.98%), Postives = 157/162 (96.91%), Query Frame = 0


Query: 1   MIRKRFQEAKTGLQLVKSMRAERFLKKVGLGREDRYFWKQIGKALLFSYTLIGVAWLYNE 60
           MIRKRFQEAKTG+QL+KSMRAERFLKKVGLGREDRYFWKQ+GKALL +YTLIGVAWLYNE
Sbjct: 1   MIRKRFQEAKTGMQLMKSMRAERFLKKVGLGREDRYFWKQVGKALLCTYTLIGVAWLYNE 60

Query: 61  TSPFGWWTLKPRSKAEKDLAHLYERREFPYPGDEEAMEDFIAKGGMIGTAIGPKGVIDFD 120
           TSPFGWWTLKPRSKAEKDLAHLYERREFPYPGDEEAMEDFI KGGMIGTAIGPKG++DFD
Sbjct: 61  TSPFGWWTLKPRSKAEKDLAHLYERREFPYPGDEEAMEDFIVKGGMIGTAIGPKGILDFD 120

Query: 121 KDSFNYQKELEKNKLEQEAQKLWFRMRNEVISELQGKGYDVE 163
           KDS+NYQKEL+  KLEQEAQKLWFRMRNEVISELQ KGYDVE
Sbjct: 121 KDSYNYQKELQNTKLEQEAQKLWFRMRNEVISELQEKGYDVE 162

[Close]

BLAST of Carg12410 vs. ExPASy TrEMBL
Match: A0A6J1HJ79 (uncharacterized protein LOC111464959 OS=Cucurbita moschata OX=3662 GN=LOC111464959 PE=4 SV=1)

HSP 1 Score: 313.2 bits (801), Expect = 6.6e-82
Identity = 150/162 (92.59%), Postives = 157/162 (96.91%), Query Frame = 0


Query: 1   MIRKRFQEAKTGLQLVKSMRAERFLKKVGLGREDRYFWKQIGKALLFSYTLIGVAWLYNE 60
           MIRKRFQEAKTGLQLVKSMR E+FLKKVGLGRED YFWKQIGKALL +YTLIG AWLYNE
Sbjct: 1   MIRKRFQEAKTGLQLVKSMRTEKFLKKVGLGREDGYFWKQIGKALLCTYTLIGAAWLYNE 60

Query: 61  TSPFGWWTLKPRSKAEKDLAHLYERREFPYPGDEEAMEDFIAKGGMIGTAIGPKGVIDFD 120
           TSPFGWWTLKPRSKAEKDLAHLYERREFPYPGDEEAME+FIAKGGMIGTAIGPKG++DFD
Sbjct: 61  TSPFGWWTLKPRSKAEKDLAHLYERREFPYPGDEEAMEEFIAKGGMIGTAIGPKGMVDFD 120

Query: 121 KDSFNYQKELEKNKLEQEAQKLWFRMRNEVISELQGKGYDVE 163
           KDS+NY+KELEKNKLEQEAQKLWFRMRNEVISELQ KGYDVE
Sbjct: 121 KDSYNYEKELEKNKLEQEAQKLWFRMRNEVISELQEKGYDVE 162

[Close]

BLAST of Carg12410 vs. ExPASy TrEMBL
Match: A0A1S3C5F1 (uncharacterized protein LOC103497102 OS=Cucumis melo OX=3656 GN=LOC103497102 PE=4 SV=1)

HSP 1 Score: 306.2 bits (783), Expect = 8.0e-80
Identity = 145/162 (89.51%), Postives = 154/162 (95.06%), Query Frame = 0


Query: 1   MIRKRFQEAKTGLQLVKSMRAERFLKKVGLGREDRYFWKQIGKALLFSYTLIGVAWLYNE 60
           MIRKRFQEAKTG+QL+ SMR ERFL+KVGLGREDRYFWKQIGKALL +YT+IG AWLYNE
Sbjct: 1   MIRKRFQEAKTGMQLMNSMRVERFLRKVGLGREDRYFWKQIGKALLCTYTVIGAAWLYNE 60

Query: 61  TSPFGWWTLKPRSKAEKDLAHLYERREFPYPGDEEAMEDFIAKGGMIGTAIGPKGVIDFD 120
           TSPFGWWTLKPRSKAEKDLAHLYERREFPYPGDEEAMEDFI KGGMIGTAIGPKG++DFD
Sbjct: 61  TSPFGWWTLKPRSKAEKDLAHLYERREFPYPGDEEAMEDFIVKGGMIGTAIGPKGILDFD 120

Query: 121 KDSFNYQKELEKNKLEQEAQKLWFRMRNEVISELQGKGYDVE 163
           KDS+NYQKEL+  KLEQEAQKLWFRMRNEVISELQ KGYDVE
Sbjct: 121 KDSYNYQKELQNAKLEQEAQKLWFRMRNEVISELQEKGYDVE 162

[Close]

BLAST of Carg12410 vs. TAIR 10
Match: AT5G58920.1 (unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 256.9 bits (655), Expect = 1.1e-68
Identity = 114/162 (70.37%), Postives = 144/162 (88.89%), Query Frame = 0


Query: 1   MIRKRFQEAKTGLQLVKSMRAERFLKKVGLGREDRYFWKQIGKALLFSYTLIGVAWLYNE 60
           M+RK+FQ+AKTG++ +KSM A  +LKKVGLGR+D +FWKQ+GKALL +YT+ G+AW+YNE
Sbjct: 1   MVRKQFQQAKTGIEALKSMDANNYLKKVGLGRDDMFFWKQVGKALLCTYTIFGMAWIYNE 60

Query: 61  TSPFGWWTLKPRSKAEKDLAHLYERREFPYPGDEEAMEDFIAKGGMIGTAIGPKGVIDFD 120
           TSP GWWTLKPR K E++LAHLYERREFPYPGD EAMEDF+AKGGMIGTAIGPKG+++ +
Sbjct: 61  TSPLGWWTLKPRPKEERELAHLYERREFPYPGDTEAMEDFVAKGGMIGTAIGPKGIVESE 120

Query: 121 KDSFNYQKELEKNKLEQEAQKLWFRMRNEVISELQGKGYDVE 163
            ++ NYQKE+EK K ++EAQKLW RMRNEVI+ELQ KG+++E
Sbjct: 121 GEADNYQKEMEKKKFDKEAQKLWLRMRNEVITELQEKGHNLE 162

The following BLAST results are available for this feature:

BLAST of Carg12410 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022948350.1	1.7e-87	100.00	uncharacterized protein LOC111452054 [Cucurbita moschata] >XP_022948351.1 unchar...	[more]
XP_022998684.1	6.3e-87	99.38	uncharacterized protein LOC111493271 [Cucurbita maxima] >XP_022998685.1 uncharac...	[more]
XP_023523491.1	3.1e-86	98.15	uncharacterized protein LOC111787692 [Cucurbita pepo subsp. pepo] >XP_023523492....	[more]
XP_004154327.1	8.0e-82	91.98	uncharacterized protein LOC101221969 isoform X1 [Cucumis sativus] >XP_011658438....	[more]
XP_038895441.1	1.0e-81	92.59	uncharacterized protein LOC120083675 [Benincasa hispida] >XP_038895442.1 unchara...	[more]

BLAST of Carg12410 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg12410 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G9K9	8.0e-88	100.00	uncharacterized protein LOC111452054 OS=Cucurbita moschata OX=3662 GN=LOC1114520...	[more]
A0A6J1KD63	3.0e-87	99.38	uncharacterized protein LOC111493271 OS=Cucurbita maxima OX=3661 GN=LOC111493271...	[more]
A0A0A0LY68	3.9e-82	91.98	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G528470 PE=4 SV=1	[more]
A0A6J1HJ79	6.6e-82	92.59	uncharacterized protein LOC111464959 OS=Cucurbita moschata OX=3662 GN=LOC1114649...	[more]
A0A1S3C5F1	8.0e-80	89.51	uncharacterized protein LOC103497102 OS=Cucumis melo OX=3656 GN=LOC103497102 PE=...	[more]

BLAST of Carg12410 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G58920.1	1.1e-68	70.37	unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR36077	BNAA02G07370D PROTEIN	coord: 1..162

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg12410-RA	Carg12410-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane