Carg12400 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTGCCATGTCCATACCAAGGCCACATAAACCCAATGCTTCACCTAGCCACATTCCTTCACCAAAACGGCTTCTCAATAACACACACCCCCATAGCCCACACATTCTACAACTCTCCCAACCCCTATCGTCACCCGGAGTTCACCTTCCTCCCCCTCAACGACGGCATCACCGACGACCACGTGTTCTCATGGGATCTGGCGTCAGTGTTGCTAGCCATCAATGAGAATTGCAAGGGGAGCTTGGAGGAGGCAATGGCGGCTATGACTGGATTATGTATTATTGTGAAGGTGTAG ATGGTGCCATGTCCATACCAAGGCCACATAAACCCAATGCTTCACCTAGCCACATTCCTTCACCAAAACGGCTTCTCAATAACACACACCCCCATAGCCCACACATTCTACAACTCTCCCAACCCCTATCGTCACCCGGAGTTCACCTTCCTCCCCCTCAACGACGGCATCACCGACGACCACGTGTTCTCATGGGATCTGGCGTCAGTGTTGCTAGCCATCAATGAGAATTGCAAGGGGAGCTTGGAGGAGGCAATGGCGGCTATGACTGGATTATGTATTATTGTGAAGGTGTAG ATGGTGCCATGTCCATACCAAGGCCACATAAACCCAATGCTTCACCTAGCCACATTCCTTCACCAAAACGGCTTCTCAATAACACACACCCCCATAGCCCACACATTCTACAACTCTCCCAACCCCTATCGTCACCCGGAGTTCACCTTCCTCCCCCTCAACGACGGCATCACCGACGACCACGTGTTCTCATGGGATCTGGCGTCAGTGTTGCTAGCCATCAATGAGAATTGCAAGGGGAGCTTGGAGGAGGCAATGGCGGCTATGACTGGATTATGTATTATTGTGAAGGTGTAG MVPCPYQGHINPMLHLATFLHQNGFSITHTPIAHTFYNSPNPYRHPEFTFLPLNDGITDDHVFSWDLASVLLAINENCKGSLEEAMAAMTGLCIIVKV Homology
BLAST of Carg12400 vs. NCBI nr
Match: KAG7036957.1 (UDP-glycosyltransferase 76C4, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 211.1 bits (536), Expect = 4.4e-51 Identity = 98/98 (100.00%), Postives = 98/98 (100.00%), Query Frame = 0
BLAST of Carg12400 vs. NCBI nr
Match: XP_023524558.1 (UDP-glycosyltransferase 76C3-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 175.3 bits (443), Expect = 2.7e-40 Identity = 83/91 (91.21%), Postives = 85/91 (93.41%), Query Frame = 0
BLAST of Carg12400 vs. NCBI nr
Match: XP_022998668.1 (LOW QUALITY PROTEIN: UDP-glucose iridoid glucosyltransferase-like [Cucurbita maxima]) HSP 1 Score: 172.2 bits (435), Expect = 2.3e-39 Identity = 82/91 (90.11%), Postives = 84/91 (92.31%), Query Frame = 0
BLAST of Carg12400 vs. NCBI nr
Match: XP_022948626.1 (UDP-glucose iridoid glucosyltransferase-like [Cucurbita moschata]) HSP 1 Score: 141.7 bits (356), Expect = 3.3e-30 Identity = 67/91 (73.63%), Postives = 76/91 (83.52%), Query Frame = 0
BLAST of Carg12400 vs. NCBI nr
Match: KAG7036959.1 (UDP-glucose iridoid glucosyltransferase [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 141.7 bits (356), Expect = 3.3e-30 Identity = 67/91 (73.63%), Postives = 76/91 (83.52%), Query Frame = 0
BLAST of Carg12400 vs. ExPASy Swiss-Prot
Match: K4D3V7 (UDP-glycosyltransferase 76E1 OS=Solanum lycopersicum OX=4081 GN=UGT76E1 PE=1 SV=1) HSP 1 Score: 75.5 bits (184), Expect = 3.8e-13 Identity = 37/89 (41.57%), Postives = 53/89 (59.55%), Query Frame = 0
BLAST of Carg12400 vs. ExPASy Swiss-Prot
Match: Q9FI99 (UDP-glycosyltransferase 76C1 OS=Arabidopsis thaliana OX=3702 GN=UGT76C1 PE=1 SV=1) HSP 1 Score: 75.1 bits (183), Expect = 4.9e-13 Identity = 39/89 (43.82%), Postives = 51/89 (57.30%), Query Frame = 0
BLAST of Carg12400 vs. ExPASy Swiss-Prot
Match: Q9FI98 (UDP-glycosyltransferase 76C4 OS=Arabidopsis thaliana OX=3702 GN=UGT76C4 PE=2 SV=1) HSP 1 Score: 74.7 bits (182), Expect = 6.4e-13 Identity = 33/86 (38.37%), Postives = 52/86 (60.47%), Query Frame = 0
BLAST of Carg12400 vs. ExPASy Swiss-Prot
Match: Q9FI96 (UDP-glycosyltransferase 76C3 OS=Arabidopsis thaliana OX=3702 GN=UGT76C3 PE=3 SV=1) HSP 1 Score: 73.9 bits (180), Expect = 1.1e-12 Identity = 34/89 (38.20%), Postives = 51/89 (57.30%), Query Frame = 0
BLAST of Carg12400 vs. ExPASy Swiss-Prot
Match: U3UA11 (UDP-glucose iridoid glucosyltransferase OS=Catharanthus roseus OX=4058 GN=UGT76A2 PE=1 SV=1) HSP 1 Score: 71.6 bits (174), Expect = 5.5e-12 Identity = 38/82 (46.34%), Postives = 49/82 (59.76%), Query Frame = 0
BLAST of Carg12400 vs. ExPASy TrEMBL
Match: A0A6J1KHD9 (LOW QUALITY PROTEIN: UDP-glucose iridoid glucosyltransferase-like OS=Cucurbita maxima OX=3661 GN=LOC111493252 PE=4 SV=1) HSP 1 Score: 172.2 bits (435), Expect = 1.1e-39 Identity = 82/91 (90.11%), Postives = 84/91 (92.31%), Query Frame = 0
BLAST of Carg12400 vs. ExPASy TrEMBL
Match: A0A6J1G9R1 (UDP-glucose iridoid glucosyltransferase-like OS=Cucurbita moschata OX=3662 GN=LOC111452248 PE=4 SV=1) HSP 1 Score: 141.7 bits (356), Expect = 1.6e-30 Identity = 67/91 (73.63%), Postives = 76/91 (83.52%), Query Frame = 0
BLAST of Carg12400 vs. ExPASy TrEMBL
Match: A0A6J1DXW3 (UDP-glucose iridoid glucosyltransferase-like OS=Momordica charantia OX=3673 GN=LOC111024512 PE=4 SV=1) HSP 1 Score: 132.1 bits (331), Expect = 1.3e-27 Identity = 66/104 (63.46%), Postives = 77/104 (74.04%), Query Frame = 0
BLAST of Carg12400 vs. ExPASy TrEMBL
Match: A0A0A0LV08 (Glycosyltransferase OS=Cucumis sativus OX=3659 GN=Csa_1G526840 PE=3 SV=1) HSP 1 Score: 130.6 bits (327), Expect = 3.7e-27 Identity = 64/97 (65.98%), Postives = 77/97 (79.38%), Query Frame = 0
BLAST of Carg12400 vs. ExPASy TrEMBL
Match: A0A5A7SNF6 (Glycosyltransferase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold848G00130 PE=3 SV=1) HSP 1 Score: 127.9 bits (320), Expect = 2.4e-26 Identity = 62/97 (63.92%), Postives = 78/97 (80.41%), Query Frame = 0
BLAST of Carg12400 vs. TAIR 10
Match: AT5G05870.1 (UDP-glucosyl transferase 76C1 ) HSP 1 Score: 75.1 bits (183), Expect = 3.5e-14 Identity = 39/89 (43.82%), Postives = 51/89 (57.30%), Query Frame = 0
BLAST of Carg12400 vs. TAIR 10
Match: AT5G05880.1 (UDP-Glycosyltransferase superfamily protein ) HSP 1 Score: 74.7 bits (182), Expect = 4.6e-14 Identity = 33/86 (38.37%), Postives = 52/86 (60.47%), Query Frame = 0
BLAST of Carg12400 vs. TAIR 10
Match: AT5G05900.1 (UDP-Glycosyltransferase superfamily protein ) HSP 1 Score: 73.9 bits (180), Expect = 7.8e-14 Identity = 34/89 (38.20%), Postives = 51/89 (57.30%), Query Frame = 0
BLAST of Carg12400 vs. TAIR 10
Match: AT5G05890.1 (UDP-Glycosyltransferase superfamily protein ) HSP 1 Score: 71.2 bits (173), Expect = 5.1e-13 Identity = 34/89 (38.20%), Postives = 51/89 (57.30%), Query Frame = 0
BLAST of Carg12400 vs. TAIR 10
Match: AT3G55700.1 (UDP-Glycosyltransferase superfamily protein ) HSP 1 Score: 66.6 bits (161), Expect = 1.2e-11 Identity = 35/98 (35.71%), Postives = 50/98 (51.02%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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