Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAATGGATGGAATAATTGTTGTTCTTCTATTGATTCTGGTGGCTCCGCCGTCTAACACGGCGGTGGTAGTACCAGCGACAGTGTTTAGAGAATACATAGGAGCTGAGTTCAATGATGTCAAATTTTCCGACGTTCCGATTAACCCAAATGTAGAAGAGTTTCACTTTCTCCTGTCGTTTGCAATAGACTTTGACAGCTCCCGCCGTTGTTTCACTAATGGAGTATTCAACGTTTTCTGGGATTCCTATAATCTTAGCCCTTCCGCTGTTGCTGCCATTAAAAAGGTAATCAAACGTTCAACAACCCAATATTATACCTAAAAAAAATATATCCTTTTTTGAGGATAAACTCTCGTAGCTTTGTTTTTTGTTTCTTCGAAAGATCTCGTACCAATGGAGATACTCTTATTTGTTGGATGATGAAAGTTTCACGTCCACTAATTTAGAGAATGATTCTGAGTTTCTAATCAATGAATACTCTTTCCATTGGTACGAGGTCTTTTGGGAAGCCCAAAGCAAAGCCACTAGAGCTTATGCTTAAAGTGGACAATATCATACCATTGTGGAGAGTCGTGTTCGTCTAACATTATTTACTTATAAACTCACGATCTTCCTCTTAATTAGCTAATGTGGGACTACTCTTTTAATAATCCTCCCCTCGAGCAAAATACACCATAGAGCCTCCCCCTGAGGCCTATGAAGCCCTCGAACAAAGTACATCATTTGTTCGACACTCGAGTCACTTTTGACTCTAATACTATGTTAGGAATCACGACTCTCCACAATAATATGATATTGTCTACTTTGAGTATAAGCTCTCGTAGGTTTGTTTTTCGTTTCTCCAAAAAGTCTCGTGTCGTTAGAGATAGTATTCCTTACTTATAAACTCATAATTGTTCTCTTAATTACCGAACGAAATTACTCGTGCTTTAGGATCATTCAAACGTGAGAGTGGGTGTAAGTCTCGGAGGAGACAGCGTGGGAGACTCAGGCTTTGTTTATTTCAAACCTTCTTCAATAGCTTCATGGGTTTCCAACGCAGAACGTTCACTCACAAAGCTCATAAACACCTTCAATCTCGACGGCATCGACATCGATTACGAACACTTCGAGTCGGACCCCAACACATTCGCTGAGTGCATAGGGCAGCTAATTAGACGGCTAAAGAAGAAGGGAGTCATCTCATTTGCTTCCATTGCCCCTTTTGACGACGCTGAAGTTCAAACCCATTACTTAGCCTTATGGAAAAGATACGGGCACTTGATAGATTATGTTAATTTTCAATTCTATGCTTATGATAAGACCACCACAGTTCATCAGTTTATCAAACATTTCAAAGCTCAAAGCTCAAAGTATGAAGATGGTAGGATCCTGGCAAGCTTAGCCAGCGACGATAGCGGCGGATTGTTGCCAAAGCATGGGTTTTTTAAGGCGTGTCGAAGGCTTAGAACGGACAAACTCCTTCATGGAATCTTTATTTGGTCTGCAGATGATTCACAAGCTCGTGGTTTTAGGTATGAAAAGAAGGCACAAGCACTCCTACAAAGCCCCAACTACCACTATTGA
mRNA sequence
ATGGAAATGGATGGAATAATTGTTGTTCTTCTATTGATTCTGGTGGCTCCGCCGTCTAACACGGCGGTGGTAGTACCAGCGACAGTGTTTAGAGAATACATAGGAGCTGAGTTCAATGATGTCAAATTTTCCGACGTTCCGATTAACCCAAATGTAGAAGAGTTTCACTTTCTCCTGTCGTTTGCAATAGACTTTGACAGCTCCCGCCGTTGTTTCACTAATGGAGTATTCAACGTTTTCTGGGATTCCTATAATCTTAGCCCTTCCGCTGTTGCTGCCATTAAAAAGGATCATTCAAACGTGAGAGTGGGTGTAAGTCTCGGAGGAGACAGCGTGGGAGACTCAGGCTTTGTTTATTTCAAACCTTCTTCAATAGCTTCATGGGTTTCCAACGCAGAACGTTCACTCACAAAGCTCATAAACACCTTCAATCTCGACGGCATCGACATCGATTACGAACACTTCGAGTCGGACCCCAACACATTCGCTGAGTGCATAGGGCAGCTAATTAGACGGCTAAAGAAGAAGGGAGTCATCTCATTTGCTTCCATTGCCCCTTTTGACGACGCTGAAGTTCAAACCCATTACTTAGCCTTATGGAAAAGATACGGGCACTTGATAGATTATGTTAATTTTCAATTCTATGCTTATGATAAGACCACCACAGTTCATCAGTTTATCAAACATTTCAAAGCTCAAAGCTCAAAGTATGAAGATGGTAGGATCCTGGCAAGCTTAGCCAGCGACGATAGCGGCGGATTGTTGCCAAAGCATGGGTTTTTTAAGGCGTGTCGAAGGCTTAGAACGGACAAACTCCTTCATGGAATCTTTATTTGGTCTGCAGATGATTCACAAGCTCGTGGTTTTAGGTATGAAAAGAAGGCACAAGCACTCCTACAAAGCCCCAACTACCACTATTGA
Coding sequence (CDS)
ATGGAAATGGATGGAATAATTGTTGTTCTTCTATTGATTCTGGTGGCTCCGCCGTCTAACACGGCGGTGGTAGTACCAGCGACAGTGTTTAGAGAATACATAGGAGCTGAGTTCAATGATGTCAAATTTTCCGACGTTCCGATTAACCCAAATGTAGAAGAGTTTCACTTTCTCCTGTCGTTTGCAATAGACTTTGACAGCTCCCGCCGTTGTTTCACTAATGGAGTATTCAACGTTTTCTGGGATTCCTATAATCTTAGCCCTTCCGCTGTTGCTGCCATTAAAAAGGATCATTCAAACGTGAGAGTGGGTGTAAGTCTCGGAGGAGACAGCGTGGGAGACTCAGGCTTTGTTTATTTCAAACCTTCTTCAATAGCTTCATGGGTTTCCAACGCAGAACGTTCACTCACAAAGCTCATAAACACCTTCAATCTCGACGGCATCGACATCGATTACGAACACTTCGAGTCGGACCCCAACACATTCGCTGAGTGCATAGGGCAGCTAATTAGACGGCTAAAGAAGAAGGGAGTCATCTCATTTGCTTCCATTGCCCCTTTTGACGACGCTGAAGTTCAAACCCATTACTTAGCCTTATGGAAAAGATACGGGCACTTGATAGATTATGTTAATTTTCAATTCTATGCTTATGATAAGACCACCACAGTTCATCAGTTTATCAAACATTTCAAAGCTCAAAGCTCAAAGTATGAAGATGGTAGGATCCTGGCAAGCTTAGCCAGCGACGATAGCGGCGGATTGTTGCCAAAGCATGGGTTTTTTAAGGCGTGTCGAAGGCTTAGAACGGACAAACTCCTTCATGGAATCTTTATTTGGTCTGCAGATGATTCACAAGCTCGTGGTTTTAGGTATGAAAAGAAGGCACAAGCACTCCTACAAAGCCCCAACTACCACTATTGA
Protein sequence
MEMDGIIVVLLLILVAPPSNTAVVVPATVFREYIGAEFNDVKFSDVPINPNVEEFHFLLSFAIDFDSSRRCFTNGVFNVFWDSYNLSPSAVAAIKKDHSNVRVGVSLGGDSVGDSGFVYFKPSSIASWVSNAERSLTKLINTFNLDGIDIDYEHFESDPNTFAECIGQLIRRLKKKGVISFASIAPFDDAEVQTHYLALWKRYGHLIDYVNFQFYAYDKTTTVHQFIKHFKAQSSKYEDGRILASLASDDSGGLLPKHGFFKACRRLRTDKLLHGIFIWSADDSQARGFRYEKKAQALLQSPNYHY
Homology
BLAST of Carg12349 vs. NCBI nr
Match:
KAG6607221.1 (hypothetical protein SDJN03_00563, partial [Cucurbita argyrosperma subsp. sororia] >KAG7036906.1 hypothetical protein SDJN02_00526, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 621.7 bits (1602), Expect = 3.4e-174
Identity = 306/306 (100.00%), Postives = 306/306 (100.00%), Query Frame = 0
Query: 1 MEMDGIIVVLLLILVAPPSNTAVVVPATVFREYIGAEFNDVKFSDVPINPNVEEFHFLLS 60
MEMDGIIVVLLLILVAPPSNTAVVVPATVFREYIGAEFNDVKFSDVPINPNVEEFHFLLS
Sbjct: 1 MEMDGIIVVLLLILVAPPSNTAVVVPATVFREYIGAEFNDVKFSDVPINPNVEEFHFLLS 60
Query: 61 FAIDFDSSRRCFTNGVFNVFWDSYNLSPSAVAAIKKDHSNVRVGVSLGGDSVGDSGFVYF 120
FAIDFDSSRRCFTNGVFNVFWDSYNLSPSAVAAIKKDHSNVRVGVSLGGDSVGDSGFVYF
Sbjct: 61 FAIDFDSSRRCFTNGVFNVFWDSYNLSPSAVAAIKKDHSNVRVGVSLGGDSVGDSGFVYF 120
Query: 121 KPSSIASWVSNAERSLTKLINTFNLDGIDIDYEHFESDPNTFAECIGQLIRRLKKKGVIS 180
KPSSIASWVSNAERSLTKLINTFNLDGIDIDYEHFESDPNTFAECIGQLIRRLKKKGVIS
Sbjct: 121 KPSSIASWVSNAERSLTKLINTFNLDGIDIDYEHFESDPNTFAECIGQLIRRLKKKGVIS 180
Query: 181 FASIAPFDDAEVQTHYLALWKRYGHLIDYVNFQFYAYDKTTTVHQFIKHFKAQSSKYEDG 240
FASIAPFDDAEVQTHYLALWKRYGHLIDYVNFQFYAYDKTTTVHQFIKHFKAQSSKYEDG
Sbjct: 181 FASIAPFDDAEVQTHYLALWKRYGHLIDYVNFQFYAYDKTTTVHQFIKHFKAQSSKYEDG 240
Query: 241 RILASLASDDSGGLLPKHGFFKACRRLRTDKLLHGIFIWSADDSQARGFRYEKKAQALLQ 300
RILASLASDDSGGLLPKHGFFKACRRLRTDKLLHGIFIWSADDSQARGFRYEKKAQALLQ
Sbjct: 241 RILASLASDDSGGLLPKHGFFKACRRLRTDKLLHGIFIWSADDSQARGFRYEKKAQALLQ 300
Query: 301 SPNYHY 307
SPNYHY
Sbjct: 301 SPNYHY 306
BLAST of Carg12349 vs. NCBI nr
Match:
XP_022949055.1 (chitinase 2-like [Cucurbita moschata])
HSP 1 Score: 606.3 bits (1562), Expect = 1.5e-169
Identity = 299/304 (98.36%), Postives = 299/304 (98.36%), Query Frame = 0
Query: 3 MDGIIVVLLLILVAPPSNTAVVVPATVFREYIGAEFNDVKFSDVPINPNVEEFHFLLSFA 62
MDGIIVVLLLILVAPPSNTAVVVPA VFREYIGAEFNDVKFSDVPINPNVEEFHFLLSFA
Sbjct: 1 MDGIIVVLLLILVAPPSNTAVVVPAAVFREYIGAEFNDVKFSDVPINPNVEEFHFLLSFA 60
Query: 63 IDFDSSRRCFTNGVFNVFWDSYNLSPSAVAAIKKDHSNVRVGVSLGGDSVGDSGFVYFKP 122
IDFDSSRRCFTNGVFNVFWDSYNLSPSAVAAIKKDHSNVRVGVSLGGDSVGDSGFVYFKP
Sbjct: 61 IDFDSSRRCFTNGVFNVFWDSYNLSPSAVAAIKKDHSNVRVGVSLGGDSVGDSGFVYFKP 120
Query: 123 SSIASWVSNAERSLTKLINTFNLDGIDIDYEHFESDPNTFAECIGQLIRRLKKKGVISFA 182
SSIASWVSNAERSLTKLINTFNLDGIDIDYEHFESDPNTFAECIGQLIRRLKKKGVISFA
Sbjct: 121 SSIASWVSNAERSLTKLINTFNLDGIDIDYEHFESDPNTFAECIGQLIRRLKKKGVISFA 180
Query: 183 SIAPFDDAEVQTHYLALWKRYGHLIDYVNFQFYAYDKTTTVHQFIKHFKAQSSKYEDGRI 242
SIAPFDDAEVQTHYLALWKRYGHLIDYVNFQFYAYDKTTTVHQFIKHFKAQSS YE GRI
Sbjct: 181 SIAPFDDAEVQTHYLALWKRYGHLIDYVNFQFYAYDKTTTVHQFIKHFKAQSSNYEGGRI 240
Query: 243 LASLASDDSGGLLPKHGFFKACRRLRTDKLLHGIFIWSADDSQARGFRYEKKAQALLQSP 302
LASLASDDSGGLL KHGFFKACRRLRTDKLLHGIFIWSADDSQA GFRYEKKAQALLQSP
Sbjct: 241 LASLASDDSGGLLSKHGFFKACRRLRTDKLLHGIFIWSADDSQAHGFRYEKKAQALLQSP 300
Query: 303 NYHY 307
NYHY
Sbjct: 301 NYHY 304
BLAST of Carg12349 vs. NCBI nr
Match:
XP_023524573.1 (chitinase 2-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 599.7 bits (1545), Expect = 1.4e-167
Identity = 295/305 (96.72%), Postives = 297/305 (97.38%), Query Frame = 0
Query: 1 MEMDGIIVVLLLILVAPPSNTAVVVPATVFREYIGAEFNDVKFSDVPINPNVEEFHFLLS 60
MEMDGIIVVLLLILVAPPS AVVVPATVFREYIGAEFNDVKFSDVPINPNVEEFHFLLS
Sbjct: 1 MEMDGIIVVLLLILVAPPSTAAVVVPATVFREYIGAEFNDVKFSDVPINPNVEEFHFLLS 60
Query: 61 FAIDFDSSRRCFTNGVFNVFWDSYNLSPSAVAAIKKDHSNVRVGVSLGGDSVGDSGFVYF 120
FAIDFDSSRRCFTNGVFNVFWDSYNLSPSAVAAIKK+HSNVRVGVSLGGDSVGDSGFVYF
Sbjct: 61 FAIDFDSSRRCFTNGVFNVFWDSYNLSPSAVAAIKKNHSNVRVGVSLGGDSVGDSGFVYF 120
Query: 121 KPSSIASWVSNAERSLTKLINTFNLDGIDIDYEHFESDPNTFAECIGQLIRRLKKKGVIS 180
KPSSIASWVSNAERSLTKLINTF LDGIDIDYEHFESDPNTFAECIGQLIRRLKKKGVIS
Sbjct: 121 KPSSIASWVSNAERSLTKLINTFKLDGIDIDYEHFESDPNTFAECIGQLIRRLKKKGVIS 180
Query: 181 FASIAPFDDAEVQTHYLALWKRYGHLIDYVNFQFYAYDKTTTVHQFIKHFKAQSSKYEDG 240
FASIAPFDD EVQ HYLALWKRYGHLIDYVNFQFYAYDKTTTVHQFIKHFKAQSS YE G
Sbjct: 181 FASIAPFDDTEVQAHYLALWKRYGHLIDYVNFQFYAYDKTTTVHQFIKHFKAQSSNYEGG 240
Query: 241 RILASLASDDSGGLLPKHGFFKACRRLRTDKLLHGIFIWSADDSQARGFRYEKKAQALLQ 300
RILASLASDD+GGLLPKHGFFKACRRLRTDKLLHGIFIWSADDSQA GFRYEKKAQALLQ
Sbjct: 241 RILASLASDDTGGLLPKHGFFKACRRLRTDKLLHGIFIWSADDSQAHGFRYEKKAQALLQ 300
Query: 301 SPNYH 306
SPNYH
Sbjct: 301 SPNYH 305
BLAST of Carg12349 vs. NCBI nr
Match:
XP_038895814.1 (chitinase 2-like [Benincasa hispida])
HSP 1 Score: 487.6 bits (1254), Expect = 7.6e-134
Identity = 239/290 (82.41%), Postives = 261/290 (90.00%), Query Frame = 0
Query: 14 LVAPPSNTAVVVPATVFREYIGAEFNDVKFSDVPINPNVEEFHFLLSFAIDFDSSRRCFT 73
+VAPPS+ A VFREYIGAEF DVKFSDVPINPNVEEFHFLLSFAIDFDSSRR FT
Sbjct: 1 MVAPPSH-AAAGRGNVFREYIGAEFKDVKFSDVPINPNVEEFHFLLSFAIDFDSSRRSFT 60
Query: 74 NGVFNVFWDSYNLSPSAVAAIKKDHSNVRVGVSLGGDSVGDSGFVYFKPSSIASWVSNAE 133
NGVFNVFWDS NLSPSAVA+IK+DHSNVRVGVSLGGDSV G V+FKPSSIASWVSNAE
Sbjct: 61 NGVFNVFWDSDNLSPSAVASIKRDHSNVRVGVSLGGDSVDKGGSVFFKPSSIASWVSNAE 120
Query: 134 RSLTKLINTFNLDGIDIDYEHFESDPNTFAECIGQLIRRLKKKGVISFASIAPFDDAEVQ 193
SLT+LINT+NLDGIDIDYEHF+SDP+TFA+CIGQLI RLKKKG+ISFASIAPFD AEVQ
Sbjct: 121 TSLTELINTYNLDGIDIDYEHFKSDPSTFAKCIGQLIGRLKKKGIISFASIAPFDKAEVQ 180
Query: 194 THYLALWKRYGHLIDYVNFQFYAYDKTTTVHQFIKHFKAQSSKYEDGRILASLASDDSGG 253
+HYLALW+ YGHLIDYVNFQFYAYDK TTV QFI+HFKAQ S YE GR+LASLASDDSGG
Sbjct: 181 SHYLALWRSYGHLIDYVNFQFYAYDKGTTVGQFIQHFKAQLSNYEGGRVLASLASDDSGG 240
Query: 254 LLPKHGFFKACRRLRTDKLLHGIFIWSADDSQARGFRYEKKAQALLQSPN 304
L+P +GFF+ACR+L+T+KLL GIFIWSADDSQ+ GF YEKKAQALL PN
Sbjct: 241 LVPDNGFFRACRKLKTEKLLDGIFIWSADDSQSNGFGYEKKAQALLAMPN 289
BLAST of Carg12349 vs. NCBI nr
Match:
KGN65683.1 (hypothetical protein Csa_019605 [Cucumis sativus])
HSP 1 Score: 482.3 bits (1240), Expect = 3.2e-132
Identity = 237/297 (79.80%), Postives = 265/297 (89.23%), Query Frame = 0
Query: 7 IVVLLLILVAPPSNTAVVVPATVFREYIGAEFNDVKFSDVPINPNVEEFHFLLSFAIDFD 66
++ LL +LVAPPS A PA VFREYIGAEFN+VKFSDVPI+ NVEEFHFLLSFAIDFD
Sbjct: 15 LLFLLQLLVAPPSLMA-AGPANVFREYIGAEFNNVKFSDVPIHSNVEEFHFLLSFAIDFD 74
Query: 67 SSRRCFTNGVFNVFWDSYNLSPSAVAAIKKDHSNVRVGVSLGGDSVGDSGFVYFKPSSIA 126
+S R FTNG F+VFWDS NL+PSAVA+IKKDHSNVRVGVSLGGD+V + G V+FKPSSI
Sbjct: 75 ASSRSFTNGAFDVFWDSDNLNPSAVASIKKDHSNVRVGVSLGGDTVDNGGSVFFKPSSIH 134
Query: 127 SWVSNAERSLTKLINTFNLDGIDIDYEHFESDPNTFAECIGQLIRRLKKKGVISFASIAP 186
SWVSNAE SLTK+I T+NLDGIDIDYEHF+SDP+TFAECIGQLI+RLKKKG+ISFASIAP
Sbjct: 135 SWVSNAEHSLTKIIKTYNLDGIDIDYEHFKSDPDTFAECIGQLIKRLKKKGIISFASIAP 194
Query: 187 FDDAEVQTHYLALWKRYGHLIDYVNFQFYAYDKTTTVHQFIKHFKAQSSKYEDGRILASL 246
FDD EVQ+HYLALWKRYGHLIDYVNFQFYAYDK TT+ QFI+HFK Q S YE GRILASL
Sbjct: 195 FDDDEVQSHYLALWKRYGHLIDYVNFQFYAYDKGTTIGQFIQHFKDQMSNYEGGRILASL 254
Query: 247 ASDDSGGLLPKHGFFKACRRLRTDKLLHGIFIWSADDSQARGFRYEKKAQALLQSPN 304
SDDSGGL+PK+GFFKACRRL+ +KLL+GIFIWSADDSQA+GF YEK AQ+LL PN
Sbjct: 255 VSDDSGGLVPKNGFFKACRRLKKEKLLNGIFIWSADDSQAKGFDYEKTAQSLLAKPN 310
BLAST of Carg12349 vs. ExPASy Swiss-Prot
Match:
Q9SLP4 (Chitinase 1 OS=Tulipa saxatilis subsp. bakeri OX=110455 PE=1 SV=1)
HSP 1 Score: 369.0 bits (946), Expect = 5.2e-101
Identity = 184/297 (61.95%), Postives = 227/297 (76.43%), Query Frame = 0
Query: 10 LLLILVAPPSNTAVVVPATVFREYIGAEFNDVKFSDVPINPNVEEFHFLLSFAIDFDS-S 69
LLL+ A S + A VFREYIG++FNDVKFSDVPINP+V +FHF+L+FAID+ S S
Sbjct: 9 LLLLFFALLSPLLPLTSALVFREYIGSQFNDVKFSDVPINPDV-DFHFILAFAIDYTSGS 68
Query: 70 RRCFTNGVFNVFWDSYNLSPSAVAAIKKDHSNVRVGVSLGGDSVGDSGFVYFKPSSIASW 129
TNG F FWD+ NLSPS VAA+K+ HSNV+V +SLGGDSVG V+F PSS++SW
Sbjct: 69 SPTPTNGNFKPFWDTNNLSPSQVAAVKRTHSNVKVSLSLGGDSVGGKN-VFFSPSSVSSW 128
Query: 130 VSNAERSLTKLINTFNLDGIDIDYEHFESDPNTFAECIGQLIRRLKKKGVISFASIAPFD 189
V NA SLT++I ++LDGIDIDYEHF+ DPNTFAECIGQL+ RLKK V+SF SIAPFD
Sbjct: 129 VENAVSSLTRIIKQYHLDGIDIDYEHFKGDPNTFAECIGQLVTRLKKNEVVSFVSIAPFD 188
Query: 190 DAEVQTHYLALWKRYGHLIDYVNFQFYAYDKTTTVHQFIKHFKAQSSKYEDGRILASLAS 249
DA+VQ+HY ALW++YGH IDYVNFQFYAY T+V QF+K+F+ QSS Y G++L S ++
Sbjct: 189 DAQVQSHYQALWEKYGHQIDYVNFQFYAYSARTSVEQFLKYFEEQSSNYHGGKVLVSFST 248
Query: 250 DDSGGLLPKHGFFKACRRLRTDKLLHGIFIWSADDSQARG--FRYEKKAQALLQSPN 304
D SGGL P +GFF+AC L+ LHGIF+WSADDS FRYE +AQ++L S N
Sbjct: 249 DSSGGLKPDNGFFRACSILKKQGKLHGIFVWSADDSLMSNNVFRYEMQAQSMLASVN 303
BLAST of Carg12349 vs. ExPASy Swiss-Prot
Match:
Q7M443 (Chitinase 2 OS=Tulipa saxatilis subsp. bakeri OX=110455 PE=1 SV=1)
HSP 1 Score: 363.6 bits (932), Expect = 2.2e-99
Identity = 177/276 (64.13%), Postives = 218/276 (78.99%), Query Frame = 0
Query: 29 VFREYIGAEFNDVKFSDVPINPNVEEFHFLLSFAIDFDS-SRRCFTNGVFNVFWDSYNLS 88
+FREYIGA+FNDVKFSDVPINPNV +FHF+L+FAID+ S S TNG FN FWD+ NLS
Sbjct: 2 LFREYIGAQFNDVKFSDVPINPNV-DFHFILAFAIDYTSGSSPTPTNGNFNPFWDTNNLS 61
Query: 89 PSAVAAIKKDHSNVRVGVSLGGDSVGDSGFVYFKPSSIASWVSNAERSLTKLINTFNLDG 148
PS VAAIK+ ++NV+V VSLGG+SVG V+F PSS++SWV NA SLTK+I ++LDG
Sbjct: 62 PSQVAAIKRTYNNVKVSVSLGGNSVGGER-VFFNPSSVSSWVDNAVSSLTKIIKQYHLDG 121
Query: 149 IDIDYEHFESDPNTFAECIGQLIRRLKKKGVISFASIAPFDDAEVQTHYLALWKRYGHLI 208
IDIDYEHF+ DPNTFAECIGQL+ RLKK GV+SF SIAPFDDA+VQ+HY ALW++YGH I
Sbjct: 122 IDIDYEHFKGDPNTFAECIGQLVTRLKKNGVVSFVSIAPFDDAQVQSHYQALWEKYGHQI 181
Query: 209 DYVNFQFYAYDKTTTVHQFIKHFKAQSSKYEDGRILASLASDDSGGLLPKHGFFKACRRL 268
DYVNFQFY Y +V QF+K+F+ Q S Y G++L S ++D+SGGL P++GFF AC L
Sbjct: 182 DYVNFQFYVYSSRMSVEQFLKYFEMQRSNYPGGKVLVSFSTDNSGGLKPRNGFFDACSIL 241
Query: 269 RTDKLLHGIFIWSADDSQARG--FRYEKKAQALLQS 302
+ LHGIF+WSADDS F+YE +AQ+LL S
Sbjct: 242 KKQGKLHGIFVWSADDSLMSNDVFKYEMQAQSLLAS 275
BLAST of Carg12349 vs. ExPASy Swiss-Prot
Match:
P39657 (RuBisCO-associated protein OS=Glycine max OX=3847 PE=2 SV=1)
HSP 1 Score: 102.8 bits (255), Expect = 6.9e-21
Identity = 65/188 (34.57%), Postives = 93/188 (49.47%), Query Frame = 0
Query: 29 VFREYIGAEFNDVKFSDVPINPNVEEFHFLLSFAIDFDSSRRCFTNGVFNVFWDSYNLSP 88
VFRE+ +D F + I N+ EF LS A D+D + TNG F +WD+ ++P
Sbjct: 7 VFREFT----SDDSFLNQVIPENITEFQVTLSLARDYDGNNS--TNGKFIPYWDTEKVTP 66
Query: 89 SAVAAIKKDHS----NVRVGVSLGGDSVGDSGFVYFKPSSIASWVSNAERSLTKLINTFN 148
+ KK + V+V VS+G + F S+ +WVS A SL +I T+N
Sbjct: 67 EVIKKFKKKYEPTALRVKVLVSIGNKN-KQFPFTIGSDSNSEAWVSEATASLKSIIKTYN 126
Query: 149 LDGIDIDYEHFESDPNTFAECIGQLIRRLKKKGVISFASIAPFDDAEVQTHYLALWKRYG 208
LDGID+ YE ++ F +G L+R LK+ +I+ AS A DA Y L+ Y
Sbjct: 127 LDGIDVSYEDIAANEADFVNSVGGLVRNLKQNKLITVASFATSADAANNKFYNLLYAEYA 186
Query: 209 HLIDYVNF 213
D V F
Sbjct: 187 TFFDTVVF 187
BLAST of Carg12349 vs. ExPASy TrEMBL
Match:
A0A6J1GBP9 (chitinase 2-like OS=Cucurbita moschata OX=3662 GN=LOC111452519 PE=3 SV=1)
HSP 1 Score: 606.3 bits (1562), Expect = 7.1e-170
Identity = 299/304 (98.36%), Postives = 299/304 (98.36%), Query Frame = 0
Query: 3 MDGIIVVLLLILVAPPSNTAVVVPATVFREYIGAEFNDVKFSDVPINPNVEEFHFLLSFA 62
MDGIIVVLLLILVAPPSNTAVVVPA VFREYIGAEFNDVKFSDVPINPNVEEFHFLLSFA
Sbjct: 1 MDGIIVVLLLILVAPPSNTAVVVPAAVFREYIGAEFNDVKFSDVPINPNVEEFHFLLSFA 60
Query: 63 IDFDSSRRCFTNGVFNVFWDSYNLSPSAVAAIKKDHSNVRVGVSLGGDSVGDSGFVYFKP 122
IDFDSSRRCFTNGVFNVFWDSYNLSPSAVAAIKKDHSNVRVGVSLGGDSVGDSGFVYFKP
Sbjct: 61 IDFDSSRRCFTNGVFNVFWDSYNLSPSAVAAIKKDHSNVRVGVSLGGDSVGDSGFVYFKP 120
Query: 123 SSIASWVSNAERSLTKLINTFNLDGIDIDYEHFESDPNTFAECIGQLIRRLKKKGVISFA 182
SSIASWVSNAERSLTKLINTFNLDGIDIDYEHFESDPNTFAECIGQLIRRLKKKGVISFA
Sbjct: 121 SSIASWVSNAERSLTKLINTFNLDGIDIDYEHFESDPNTFAECIGQLIRRLKKKGVISFA 180
Query: 183 SIAPFDDAEVQTHYLALWKRYGHLIDYVNFQFYAYDKTTTVHQFIKHFKAQSSKYEDGRI 242
SIAPFDDAEVQTHYLALWKRYGHLIDYVNFQFYAYDKTTTVHQFIKHFKAQSS YE GRI
Sbjct: 181 SIAPFDDAEVQTHYLALWKRYGHLIDYVNFQFYAYDKTTTVHQFIKHFKAQSSNYEGGRI 240
Query: 243 LASLASDDSGGLLPKHGFFKACRRLRTDKLLHGIFIWSADDSQARGFRYEKKAQALLQSP 302
LASLASDDSGGLL KHGFFKACRRLRTDKLLHGIFIWSADDSQA GFRYEKKAQALLQSP
Sbjct: 241 LASLASDDSGGLLSKHGFFKACRRLRTDKLLHGIFIWSADDSQAHGFRYEKKAQALLQSP 300
Query: 303 NYHY 307
NYHY
Sbjct: 301 NYHY 304
BLAST of Carg12349 vs. ExPASy TrEMBL
Match:
A0A0A0LV90 (Glyco_hydro_18 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G496300 PE=3 SV=1)
HSP 1 Score: 482.3 bits (1240), Expect = 1.5e-132
Identity = 237/297 (79.80%), Postives = 265/297 (89.23%), Query Frame = 0
Query: 7 IVVLLLILVAPPSNTAVVVPATVFREYIGAEFNDVKFSDVPINPNVEEFHFLLSFAIDFD 66
++ LL +LVAPPS A PA VFREYIGAEFN+VKFSDVPI+ NVEEFHFLLSFAIDFD
Sbjct: 15 LLFLLQLLVAPPSLMA-AGPANVFREYIGAEFNNVKFSDVPIHSNVEEFHFLLSFAIDFD 74
Query: 67 SSRRCFTNGVFNVFWDSYNLSPSAVAAIKKDHSNVRVGVSLGGDSVGDSGFVYFKPSSIA 126
+S R FTNG F+VFWDS NL+PSAVA+IKKDHSNVRVGVSLGGD+V + G V+FKPSSI
Sbjct: 75 ASSRSFTNGAFDVFWDSDNLNPSAVASIKKDHSNVRVGVSLGGDTVDNGGSVFFKPSSIH 134
Query: 127 SWVSNAERSLTKLINTFNLDGIDIDYEHFESDPNTFAECIGQLIRRLKKKGVISFASIAP 186
SWVSNAE SLTK+I T+NLDGIDIDYEHF+SDP+TFAECIGQLI+RLKKKG+ISFASIAP
Sbjct: 135 SWVSNAEHSLTKIIKTYNLDGIDIDYEHFKSDPDTFAECIGQLIKRLKKKGIISFASIAP 194
Query: 187 FDDAEVQTHYLALWKRYGHLIDYVNFQFYAYDKTTTVHQFIKHFKAQSSKYEDGRILASL 246
FDD EVQ+HYLALWKRYGHLIDYVNFQFYAYDK TT+ QFI+HFK Q S YE GRILASL
Sbjct: 195 FDDDEVQSHYLALWKRYGHLIDYVNFQFYAYDKGTTIGQFIQHFKDQMSNYEGGRILASL 254
Query: 247 ASDDSGGLLPKHGFFKACRRLRTDKLLHGIFIWSADDSQARGFRYEKKAQALLQSPN 304
SDDSGGL+PK+GFFKACRRL+ +KLL+GIFIWSADDSQA+GF YEK AQ+LL PN
Sbjct: 255 VSDDSGGLVPKNGFFKACRRLKKEKLLNGIFIWSADDSQAKGFDYEKTAQSLLAKPN 310
BLAST of Carg12349 vs. ExPASy TrEMBL
Match:
A0A6J1DUG9 (chitinase 2-like OS=Momordica charantia OX=3673 GN=LOC111023583 PE=4 SV=1)
HSP 1 Score: 478.8 bits (1231), Expect = 1.7e-131
Identity = 240/309 (77.67%), Postives = 267/309 (86.41%), Query Frame = 0
Query: 1 MEMDG------IIVVLLLILVAPPSNTAVVVPATVFREYIGAEFNDVKFSDVPINPNVEE 60
MEMDG I+V L L+L+ PPS+ A A +FREYIGAEF DVKFSDVPINP+V E
Sbjct: 1 MEMDGSGIRAFILVALQLLLLFPPSHAA----AKLFREYIGAEFKDVKFSDVPINPDV-E 60
Query: 61 FHFLLSFAIDFDSSRRCFTNGVFNVFWDSYNLSPSAVAAIKKDHSNVRVGVSLGGDSVGD 120
FHFLLSFAIDFD+SRR FTNG+FNVFWDS+NL+PS V AIKKDHSNV+VG+S+GGD+V
Sbjct: 61 FHFLLSFAIDFDASRRSFTNGIFNVFWDSHNLNPSDVVAIKKDHSNVKVGLSIGGDTV-P 120
Query: 121 SGFVYFKPSSIASWVSNAERSLTKLINTFNLDGIDIDYEHFESDPNTFAECIGQLIRRLK 180
+GF YFKPSSI SWVSNAERSLTKLIN FNLD IDIDYEHF+SDPNTFAECIG+LI+RLK
Sbjct: 121 NGFAYFKPSSIDSWVSNAERSLTKLINAFNLDSIDIDYEHFKSDPNTFAECIGRLIKRLK 180
Query: 181 KKGVISFASIAPFDDAEVQTHYLALWKRYGHLIDYVNFQFYAYDKTTTVHQFIKHFKAQS 240
KKG ISFASIAPFD AEVQ+HYLALW+ YGHLIDYVNFQFYAYDKTTTV QFI+HFKAQ+
Sbjct: 181 KKGAISFASIAPFDKAEVQSHYLALWRSYGHLIDYVNFQFYAYDKTTTVPQFIQHFKAQT 240
Query: 241 SKYEDGRILASLASDDSGGLLPKHGFFKACRRLRTDKLLHGIFIWSADDSQARGFRYEKK 300
S YE GR+LASL SDDSGGLL ++GFF ACRRLR +KLLHGIF+WSADDS A GF YEKK
Sbjct: 241 SNYEGGRVLASLVSDDSGGLLAENGFFTACRRLRAEKLLHGIFVWSADDSIANGFGYEKK 300
Query: 301 AQALLQSPN 304
AQ LL PN
Sbjct: 301 AQELLAMPN 303
BLAST of Carg12349 vs. ExPASy TrEMBL
Match:
A0A5A7SWP3 (Chitinase 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold49G00520 PE=3 SV=1)
HSP 1 Score: 474.2 bits (1219), Expect = 4.2e-130
Identity = 233/298 (78.19%), Postives = 266/298 (89.26%), Query Frame = 0
Query: 7 IVVLLLILVAPPSNTAVVVPATVFREYIGAEFNDVKFSDVPINPNVEEFHFLLSFAIDFD 66
++ LL + VAPPS A PA VFREYIGAEFN+VKFSDVPI N+EEFHFLLSFAIDFD
Sbjct: 15 LLFLLQLFVAPPSLMA-AGPANVFREYIGAEFNNVKFSDVPIRSNIEEFHFLLSFAIDFD 74
Query: 67 SSRRCFTNGVFNVFWDSYNLSPSAVAAIKKDHSNVRVGVSLGGDSVGDSGFVYFKPSSIA 126
+S R FTNG F+VFWDS NL+PSAVA+IKKDHSNVRVGVSLGGD+V + GFV+FKPSSI
Sbjct: 75 ASSRSFTNGAFDVFWDSDNLNPSAVASIKKDHSNVRVGVSLGGDTVDNGGFVFFKPSSIH 134
Query: 127 SWVSNAERSLTKLINTFNLDGIDIDYEHFESDPNTFAECIGQLIRRLKKKGVISFASIAP 186
SWVSNAE SLTK+INT+NLDGIDIDYEHF+SDP+TFAECIGQLI+RLKKKG+ISFASIAP
Sbjct: 135 SWVSNAEHSLTKIINTYNLDGIDIDYEHFKSDPDTFAECIGQLIKRLKKKGIISFASIAP 194
Query: 187 FDDAEVQTHYLALWKRYGHLIDYVNFQFYAYDKTTTVHQFIKHFKAQSSKYEDGRILASL 246
FDD EVQ+HYLALW+ YGHLIDYVNFQFYAYDK TTV QFI+HFK Q S YE GR+LASL
Sbjct: 195 FDDDEVQSHYLALWRSYGHLIDYVNFQFYAYDKGTTVGQFIRHFKDQVSNYEGGRVLASL 254
Query: 247 ASDDS-GGLLPKHGFFKACRRLRTDKLLHGIFIWSADDSQARGFRYEKKAQALLQSPN 304
ASD+S GGL+P++GFFKACRRL+ +KLL GIFIWSADDS+A+GF YEK+AQ+LL +PN
Sbjct: 255 ASDNSAGGLVPENGFFKACRRLKREKLLDGIFIWSADDSKAKGFGYEKEAQSLLATPN 311
BLAST of Carg12349 vs. ExPASy TrEMBL
Match:
A0A1S3C5A3 (chitinase 2-like OS=Cucumis melo OX=3656 GN=LOC103497192 PE=3 SV=1)
HSP 1 Score: 474.2 bits (1219), Expect = 4.2e-130
Identity = 233/298 (78.19%), Postives = 266/298 (89.26%), Query Frame = 0
Query: 7 IVVLLLILVAPPSNTAVVVPATVFREYIGAEFNDVKFSDVPINPNVEEFHFLLSFAIDFD 66
++ LL + VAPPS A PA VFREYIGAEFN+VKFSDVPI N+EEFHFLLSFAIDFD
Sbjct: 15 LLFLLQLFVAPPSLMA-AGPANVFREYIGAEFNNVKFSDVPIRSNIEEFHFLLSFAIDFD 74
Query: 67 SSRRCFTNGVFNVFWDSYNLSPSAVAAIKKDHSNVRVGVSLGGDSVGDSGFVYFKPSSIA 126
+S R FTNG F+VFWDS NL+PSAVA+IKKDHSNVRVGVSLGGD+V + GFV+FKPSSI
Sbjct: 75 ASSRSFTNGAFDVFWDSDNLNPSAVASIKKDHSNVRVGVSLGGDTVDNGGFVFFKPSSIH 134
Query: 127 SWVSNAERSLTKLINTFNLDGIDIDYEHFESDPNTFAECIGQLIRRLKKKGVISFASIAP 186
SWVSNAE SLTK+INT+NLDGIDIDYEHF+SDP+TFAECIGQLI+RLKKKG+ISFASIAP
Sbjct: 135 SWVSNAEHSLTKIINTYNLDGIDIDYEHFKSDPDTFAECIGQLIKRLKKKGIISFASIAP 194
Query: 187 FDDAEVQTHYLALWKRYGHLIDYVNFQFYAYDKTTTVHQFIKHFKAQSSKYEDGRILASL 246
FDD EVQ+HYLALW+ YGHLIDYVNFQFYAYDK TTV QFI+HFK Q S YE GR+LASL
Sbjct: 195 FDDDEVQSHYLALWRSYGHLIDYVNFQFYAYDKGTTVGQFIRHFKDQVSNYEGGRVLASL 254
Query: 247 ASDDS-GGLLPKHGFFKACRRLRTDKLLHGIFIWSADDSQARGFRYEKKAQALLQSPN 304
ASD+S GGL+P++GFFKACRRL+ +KLL GIFIWSADDS+A+GF YEK+AQ+LL +PN
Sbjct: 255 ASDNSAGGLVPENGFFKACRRLKREKLLDGIFIWSADDSKAKGFGYEKEAQSLLATPN 311
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q9SLP4 | 5.2e-101 | 61.95 | Chitinase 1 OS=Tulipa saxatilis subsp. bakeri OX=110455 PE=1 SV=1 | [more] |
Q7M443 | 2.2e-99 | 64.13 | Chitinase 2 OS=Tulipa saxatilis subsp. bakeri OX=110455 PE=1 SV=1 | [more] |
P39657 | 6.9e-21 | 34.57 | RuBisCO-associated protein OS=Glycine max OX=3847 PE=2 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1GBP9 | 7.1e-170 | 98.36 | chitinase 2-like OS=Cucurbita moschata OX=3662 GN=LOC111452519 PE=3 SV=1 | [more] |
A0A0A0LV90 | 1.5e-132 | 79.80 | Glyco_hydro_18 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G496... | [more] |
A0A6J1DUG9 | 1.7e-131 | 77.67 | chitinase 2-like OS=Momordica charantia OX=3673 GN=LOC111023583 PE=4 SV=1 | [more] |
A0A5A7SWP3 | 4.2e-130 | 78.19 | Chitinase 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold49G0052... | [more] |
A0A1S3C5A3 | 4.2e-130 | 78.19 | chitinase 2-like OS=Cucumis melo OX=3656 GN=LOC103497192 PE=3 SV=1 | [more] |
Match Name | E-value | Identity | Description | |