Carg12344 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg12344
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Protein of unknown function (DUF1635)
Location	Carg_Chr01: 3050599 .. 3052027 (+)
RNA-Seq Expression	Carg12344
Synteny	Carg12344

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATCCATCCATTTCCCTTAACCCTTTCTCCACCAAGCTCTCATCAATGGAGGATTTTGATTCTTTCTGGACTTATCAACAGGTTCGTCAATCTCTCCCTCTCTCTGATTTCCATTTTCTCTTCTGGGTCTTCCTCTCTTTGCCATTTCCACTCCATTTCTTTGGTCTTTTCTTGTTAACTTCATCCATGGAGGATAGTTTCTGGGCTTTATCTTCTCTCTGTTCTTGTCTATGTTGCTATTCAAATGCTTTCTGCTGGGGTTTCATGGGTTTCTCTTGTTGGGAGTTGAAAAAACTGAAACACAAGCGATTTTTGCATTTGGGTCTCAATTGGTTTCTGTAATTTGCTGTTTTTTAAACCCCAATTTCATGAATAAACAGAGGATTCTGGAAATTGGGTGTTCTGAAACAGTGATTTTCCAACAAGGATGTTCATCATTTCTGATAGAGAACAGTTTTGTTTTTGGAATATGTTAAATCATATCAAATAAATAATTCTATCCTGCAATGATTGGACCATGTTCGTCTTGAAACTTGTAGTGAGCATAGTTTTTGGCTTTTCACTGCTGAATTGATTCTCCCTTGTAAAAAAACAAACAAAAAACTCTGTTCACTTCCAATGGGAATCTTTGCTTTTTTCGATATTTCGATTTGGTCGAGATTATGATGTTTTAATCGATTGAGCTATGGTTATAGGGGTTGGATGAGATAAAACAGAAGCTTTTGTGTGCTACAATTGAGCTAGAATCAGCAAAAATGGAGGCAAATCAAGAGATGATGAAGAACAAAGAGAGTGTAAAGAATCTGATGAATCTTCTTCAAATGGCTTACAGAGAAAGAGATGAAGCAAAGAATCAGCTTCAAAAGGTGTTGAATGAATTGATGTTAACATCTCATTTTCAAGCTGAAAGTCCTGTAGGTAAAGCAAATTCCAGCATCACAGAATCCAACAGCCTTTCAGCTGATACATTCAACAACAATCCTCAATCTCAATCTCAATCTCTCGGCTCGCCCGTTGTTGATTCGTTCTTCGACGCTGTTTCGTCGACTGATTTCTCGAGCTTAAACGTTGGAGATTCGTATAATGTGGATCCATGTGGGTTGGTGATTGAGAACATTGTGAAGGGGAAGAAACTGCCAGAGAAGGGGAGGCTGCTGCAGTCTGTGATGGAGGCTGGACCGTTGCTTCAGACGCTGCTCGTGGCTGGGCCGCTCCCCCGGTGGAGGAATCCGCCCCCGTTGCAGCCGTTCAAGATACCTCCTGTGTTGATGAAAGGAGAGGGTGTTGTGGTGAACAGTCCTAGAATGTGTTCAAGTTCTATGTTGAATTTTTCAGGTGTTCCTTCAGAGTCATGTTGTTTGGATTACAGTGCATTGGTGTCAGGTTCTAATCCCAGTTTTGGGTGTACAAAGAGACAGAGATTGGTGTAA

mRNA sequence

ATCCATCCATTTCCCTTAACCCTTTCTCCACCAAGCTCTCATCAATGGAGGATTTTGATTCTTTCTGGACTTATCAACAGGGGTTGGATGAGATAAAACAGAAGCTTTTGTGTGCTACAATTGAGCTAGAATCAGCAAAAATGGAGGCAAATCAAGAGATGATGAAGAACAAAGAGAGTGTAAAGAATCTGATGAATCTTCTTCAAATGGCTTACAGAGAAAGAGATGAAGCAAAGAATCAGCTTCAAAAGGTGTTGAATGAATTGATGTTAACATCTCATTTTCAAGCTGAAAGTCCTGTAGGTAAAGCAAATTCCAGCATCACAGAATCCAACAGCCTTTCAGCTGATACATTCAACAACAATCCTCAATCTCAATCTCAATCTCTCGGCTCGCCCGTTGTTGATTCGTTCTTCGACGCTGTTTCGTCGACTGATTTCTCGAGCTTAAACGTTGGAGATTCGTATAATGTGGATCCATGTGGGTTGGTGATTGAGAACATTGTGAAGGGGAAGAAACTGCCAGAGAAGGGGAGGCTGCTGCAGTCTGTGATGGAGGCTGGACCGTTGCTTCAGACGCTGCTCGTGGCTGGGCCGCTCCCCCGGTGGAGGAATCCGCCCCCGTTGCAGCCGTTCAAGATACCTCCTGTGTTGATGAAAGGAGAGGGTGTTGTGGTGAACAGTCCTAGAATGTGTTCAAGTTCTATGTTGAATTTTTCAGGTGTTCCTTCAGAGTCATGTTGTTTGGATTACAGTGCATTGGTGTCAGGTTCTAATCCCAGTTTTGGGTGTACAAAGAGACAGAGATTGGTGTAA

Coding sequence (CDS)

ATGGAGGATTTTGATTCTTTCTGGACTTATCAACAGGGGTTGGATGAGATAAAACAGAAGCTTTTGTGTGCTACAATTGAGCTAGAATCAGCAAAAATGGAGGCAAATCAAGAGATGATGAAGAACAAAGAGAGTGTAAAGAATCTGATGAATCTTCTTCAAATGGCTTACAGAGAAAGAGATGAAGCAAAGAATCAGCTTCAAAAGGTGTTGAATGAATTGATGTTAACATCTCATTTTCAAGCTGAAAGTCCTGTAGGTAAAGCAAATTCCAGCATCACAGAATCCAACAGCCTTTCAGCTGATACATTCAACAACAATCCTCAATCTCAATCTCAATCTCTCGGCTCGCCCGTTGTTGATTCGTTCTTCGACGCTGTTTCGTCGACTGATTTCTCGAGCTTAAACGTTGGAGATTCGTATAATGTGGATCCATGTGGGTTGGTGATTGAGAACATTGTGAAGGGGAAGAAACTGCCAGAGAAGGGGAGGCTGCTGCAGTCTGTGATGGAGGCTGGACCGTTGCTTCAGACGCTGCTCGTGGCTGGGCCGCTCCCCCGGTGGAGGAATCCGCCCCCGTTGCAGCCGTTCAAGATACCTCCTGTGTTGATGAAAGGAGAGGGTGTTGTGGTGAACAGTCCTAGAATGTGTTCAAGTTCTATGTTGAATTTTTCAGGTGTTCCTTCAGAGTCATGTTGTTTGGATTACAGTGCATTGGTGTCAGGTTCTAATCCCAGTTTTGGGTGTACAAAGAGACAGAGATTGGTGTAA

Protein sequence

MEDFDSFWTYQQGLDEIKQKLLCATIELESAKMEANQEMMKNKESVKNLMNLLQMAYRERDEAKNQLQKVLNELMLTSHFQAESPVGKANSSITESNSLSADTFNNNPQSQSQSLGSPVVDSFFDAVSSTDFSSLNVGDSYNVDPCGLVIENIVKGKKLPEKGRLLQSVMEAGPLLQTLLVAGPLPRWRNPPPLQPFKIPPVLMKGEGVVVNSPRMCSSSMLNFSGVPSESCCLDYSALVSGSNPSFGCTKRQRLV

Homology

[Close]

BLAST of Carg12344 vs. NCBI nr
Match: KAG6593425.1 (hypothetical protein SDJN03_12901, partial [Cucurbita argyrosperma subsp. sororia] >KAG6607216.1 hypothetical protein SDJN03_00558, partial [Cucurbita argyrosperma subsp. sororia] >KAG7036901.1 hypothetical protein SDJN02_00521 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 498.0 bits (1281), Expect = 4.7e-137
Identity = 256/256 (100.00%), Postives = 256/256 (100.00%), Query Frame = 0


Query: 1   MEDFDSFWTYQQGLDEIKQKLLCATIELESAKMEANQEMMKNKESVKNLMNLLQMAYRER 60
           MEDFDSFWTYQQGLDEIKQKLLCATIELESAKMEANQEMMKNKESVKNLMNLLQMAYRER
Sbjct: 1   MEDFDSFWTYQQGLDEIKQKLLCATIELESAKMEANQEMMKNKESVKNLMNLLQMAYRER 60

Query: 61  DEAKNQLQKVLNELMLTSHFQAESPVGKANSSITESNSLSADTFNNNPQSQSQSLGSPVV 120
           DEAKNQLQKVLNELMLTSHFQAESPVGKANSSITESNSLSADTFNNNPQSQSQSLGSPVV
Sbjct: 61  DEAKNQLQKVLNELMLTSHFQAESPVGKANSSITESNSLSADTFNNNPQSQSQSLGSPVV 120

Query: 121 DSFFDAVSSTDFSSLNVGDSYNVDPCGLVIENIVKGKKLPEKGRLLQSVMEAGPLLQTLL 180
           DSFFDAVSSTDFSSLNVGDSYNVDPCGLVIENIVKGKKLPEKGRLLQSVMEAGPLLQTLL
Sbjct: 121 DSFFDAVSSTDFSSLNVGDSYNVDPCGLVIENIVKGKKLPEKGRLLQSVMEAGPLLQTLL 180

Query: 181 VAGPLPRWRNPPPLQPFKIPPVLMKGEGVVVNSPRMCSSSMLNFSGVPSESCCLDYSALV 240
           VAGPLPRWRNPPPLQPFKIPPVLMKGEGVVVNSPRMCSSSMLNFSGVPSESCCLDYSALV
Sbjct: 181 VAGPLPRWRNPPPLQPFKIPPVLMKGEGVVVNSPRMCSSSMLNFSGVPSESCCLDYSALV 240

Query: 241 SGSNPSFGCTKRQRLV 257
           SGSNPSFGCTKRQRLV
Sbjct: 241 SGSNPSFGCTKRQRLV 256

[Close]

BLAST of Carg12344 vs. NCBI nr
Match: XP_022949510.1 (uncharacterized protein LOC111452838 [Cucurbita moschata])

HSP 1 Score: 481.5 bits (1238), Expect = 4.6e-132
Identity = 249/255 (97.65%), Postives = 252/255 (98.82%), Query Frame = 0


Query: 1   MEDFDSFWTYQQGLDEIKQKLLCATIELESAKMEANQEMMKNKESVKNLMNLLQMAYRER 60
           MEDFDS WTYQQGLDEIKQKLLCATIELESAKMEANQEMMKNKESVKNLMNLLQMAY+ER
Sbjct: 1   MEDFDSLWTYQQGLDEIKQKLLCATIELESAKMEANQEMMKNKESVKNLMNLLQMAYKER 60

Query: 61  DEAKNQLQKVLNELMLTSHFQAESPVGKANSSITESNSLSADTFNNNPQSQSQSLGSPVV 120
           DEAKNQLQKVLNELMLTSHFQAESPVGKANSSITESNSLSADTFNNNP  QSQSLGSPVV
Sbjct: 61  DEAKNQLQKVLNELMLTSHFQAESPVGKANSSITESNSLSADTFNNNP--QSQSLGSPVV 120

Query: 121 DSFFDAVSSTDFSSLNVGDSYNVDPCGLVIENIVKGKKLPEKGRLLQSVMEAGPLLQTLL 180
           DSFFDAVSSTDFSSLNVGDSYNVDPCGLVIENIVKGKKLPEKGRLLQSVMEAGPLLQTLL
Sbjct: 121 DSFFDAVSSTDFSSLNVGDSYNVDPCGLVIENIVKGKKLPEKGRLLQSVMEAGPLLQTLL 180

Query: 181 VAGPLPRWRNPPPLQPFKIPPVLMKGEGVVVNSPRMCSSSMLNFSGVPSESCCLDYSALV 240
           VAGPLP+WRNPPPLQPFKIPPVLMKGEGVVVNSPRMCSSSMLNFSGVPSESCCLD+SALV
Sbjct: 181 VAGPLPQWRNPPPLQPFKIPPVLMKGEGVVVNSPRMCSSSMLNFSGVPSESCCLDHSALV 240

Query: 241 SGSNPSFGCTKRQRL 256
           SGSNPSFGCTKRQRL
Sbjct: 241 SGSNPSFGCTKRQRL 253

[Close]

BLAST of Carg12344 vs. NCBI nr
Match: XP_022998708.1 (uncharacterized protein LOC111493292 [Cucurbita maxima])

HSP 1 Score: 476.1 bits (1224), Expect = 1.9e-130
Identity = 247/256 (96.48%), Postives = 252/256 (98.44%), Query Frame = 0


Query: 1   MEDFDSFWTYQQGLDEIKQKLLCATIELESAKMEANQEMMKNKESVKNLMNLLQMAYRER 60
           MEDFDS WTYQ+GLDEIKQKLLCATIELESAKMEANQEMMKNKESVKNLMNLLQMAYRER
Sbjct: 26  MEDFDSLWTYQEGLDEIKQKLLCATIELESAKMEANQEMMKNKESVKNLMNLLQMAYRER 85

Query: 61  DEAKNQLQKVLNELMLTSHFQAESPVGKANSSITESNSLSADTFNNNPQSQSQSLGSPVV 120
           DEAKNQLQKVLNELMLTSHFQAESPVGKANSSITESNSLSADTFNNNP  QSQSLGSPVV
Sbjct: 86  DEAKNQLQKVLNELMLTSHFQAESPVGKANSSITESNSLSADTFNNNP--QSQSLGSPVV 145

Query: 121 DSFFDAVSSTDFSSLNVGDSYNVDPCGLVIENIVKGKKLPEKGRLLQSVMEAGPLLQTLL 180
           DSFFDAVSSTDFSSLNVGDSYNVDPCGLVIENIVKGKKLPEKGRLLQSVMEAGPLLQTLL
Sbjct: 146 DSFFDAVSSTDFSSLNVGDSYNVDPCGLVIENIVKGKKLPEKGRLLQSVMEAGPLLQTLL 205

Query: 181 VAGPLPRWRNPPPLQPFKIPPVLMKGEGVVVNSPRMCSSSMLNFSGVPSESCCLDYSALV 240
           VAGPLP+WRNPPPLQPFKIPPVLMKG+GVVVNSPRMCSSSMLNFSGVPSESCCL++SALV
Sbjct: 206 VAGPLPQWRNPPPLQPFKIPPVLMKGQGVVVNSPRMCSSSMLNFSGVPSESCCLNHSALV 265

Query: 241 SGSNPSFGCTKRQRLV 257
           SGSNPSFG TKRQRLV
Sbjct: 266 SGSNPSFGSTKRQRLV 279

[Close]

BLAST of Carg12344 vs. NCBI nr
Match: XP_023523158.1 (uncharacterized protein LOC111787431 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 464.5 bits (1194), Expect = 5.8e-127
Identity = 245/259 (94.59%), Postives = 251/259 (96.91%), Query Frame = 0


Query: 1   MEDFDSFWTYQQGLDEIKQKLLCATIELESAKMEANQEMMKNKESVKNLMNLLQMAYRER 60
           MEDFDS WTYQQG DEIKQKLLCATIELESAKMEANQEMMKNKESVKNLMNLLQMAY+ER
Sbjct: 26  MEDFDSLWTYQQGWDEIKQKLLCATIELESAKMEANQEMMKNKESVKNLMNLLQMAYKER 85

Query: 61  DEAKNQLQKVLNELMLTSHFQAESPVGKANSSITESNSLSADTFNNNPQSQSQSLGSPVV 120
           DEAKNQLQKVLNEL+LTSHFQAESPVGKANSSITESNSLSADTFNNNP  QSQSLGSPVV
Sbjct: 86  DEAKNQLQKVLNELILTSHFQAESPVGKANSSITESNSLSADTFNNNP--QSQSLGSPVV 145

Query: 121 DSFFDAVSSTDFSSLNVGDSYNVDPCGLVIENIVKGKKLPEKGRLLQSVMEAGPLLQTLL 180
           DSFFDAVSSTDFSSLNVGDSYNVDPCGLVIENIVKGKKLPEKGRLLQSVMEAGPLLQTLL
Sbjct: 146 DSFFDAVSSTDFSSLNVGDSYNVDPCGLVIENIVKGKKLPEKGRLLQSVMEAGPLLQTLL 205

Query: 181 VAGPLPRWRNPPPLQPFKIPPVLMKGEGVVVNSPRMCSSSMLNFSGVP--SESCCLDY-S 240
           VAGPLP+WRNPPPLQPFKIPPVLMKG+GVVVNSPRMCSSSMLNFSGVP  SESCCL++ S
Sbjct: 206 VAGPLPQWRNPPPLQPFKIPPVLMKGQGVVVNSPRMCSSSMLNFSGVPSESESCCLNHSS 265

Query: 241 ALVSGSNPSFGCTKRQRLV 257
           ALVSG NPSFGCTKRQRLV
Sbjct: 266 ALVSGCNPSFGCTKRQRLV 282

[Close]

BLAST of Carg12344 vs. NCBI nr
Match: XP_038894989.1 (uncharacterized protein LOC120083342 isoform X1 [Benincasa hispida])

HSP 1 Score: 339.0 bits (868), Expect = 3.7e-89
Identity = 192/263 (73.00%), Postives = 218/263 (82.89%), Query Frame = 0


Query: 1   MEDFDSFWTY-QQGLDEIKQKLLCATIELESAKMEANQEMMKNKESVKNLMNLLQMAYRE 60
           MEDF S W+Y Q+G+DE+KQKLLC TIELES KMEANQEM+KNKE+VKNL+NLLQ+AY+E
Sbjct: 1   MEDFASLWSYHQEGIDELKQKLLCTTIELESVKMEANQEMIKNKENVKNLLNLLQLAYKE 60

Query: 61  RDEAKNQLQKVLNELMLTSHFQAESPVGKANSSITESNSLSADTFNNNPQSQSQSLGSPV 120
           RDEAKNQL KVLN+L    ++Q ESP+ KANSSITESNSLSAD  NNN  + + +LGSPV
Sbjct: 61  RDEAKNQLHKVLNKL---HYYQPESPLVKANSSITESNSLSAD--NNNNNTFNTALGSPV 120

Query: 121 VDSFFDAVSSTDFSSLNVGDSYNVDPCGLVIENIVKGKKLPEKGRLLQSVMEAGPLLQTL 180
           VDSFFDAVSS DFSS NVGDS+NVD C LVIENIVKGKKLPEKGRLLQSVMEAGPLLQTL
Sbjct: 121 VDSFFDAVSSPDFSSFNVGDSHNVDQCSLVIENIVKGKKLPEKGRLLQSVMEAGPLLQTL 180

Query: 181 LVAGPLPRWRNPPPLQPFKI-PPVLMKGEGVVVNSPRMCSSSMLNFSGVPSESCCLDYSA 240
           LVAGPLPRWRNPPPLQPFK+ PPVL       +N+PRMCSSSMLNFS   ++SCC + + 
Sbjct: 181 LVAGPLPRWRNPPPLQPFKVLPPVL-------INTPRMCSSSMLNFS---TDSCCFNQNG 240

Query: 241 LVSGS--NPSFG----CTKRQRL 256
           LVS S  +P+FG      KRQRL
Sbjct: 241 LVSASPNSPTFGSQFYSIKRQRL 248

[Close]

BLAST of Carg12344 vs. ExPASy TrEMBL
Match: A0A6J1GCY4 (uncharacterized protein LOC111452838 OS=Cucurbita moschata OX=3662 GN=LOC111452838 PE=4 SV=1)

HSP 1 Score: 481.5 bits (1238), Expect = 2.2e-132
Identity = 249/255 (97.65%), Postives = 252/255 (98.82%), Query Frame = 0


Query: 1   MEDFDSFWTYQQGLDEIKQKLLCATIELESAKMEANQEMMKNKESVKNLMNLLQMAYRER 60
           MEDFDS WTYQQGLDEIKQKLLCATIELESAKMEANQEMMKNKESVKNLMNLLQMAY+ER
Sbjct: 1   MEDFDSLWTYQQGLDEIKQKLLCATIELESAKMEANQEMMKNKESVKNLMNLLQMAYKER 60

Query: 61  DEAKNQLQKVLNELMLTSHFQAESPVGKANSSITESNSLSADTFNNNPQSQSQSLGSPVV 120
           DEAKNQLQKVLNELMLTSHFQAESPVGKANSSITESNSLSADTFNNNP  QSQSLGSPVV
Sbjct: 61  DEAKNQLQKVLNELMLTSHFQAESPVGKANSSITESNSLSADTFNNNP--QSQSLGSPVV 120

Query: 121 DSFFDAVSSTDFSSLNVGDSYNVDPCGLVIENIVKGKKLPEKGRLLQSVMEAGPLLQTLL 180
           DSFFDAVSSTDFSSLNVGDSYNVDPCGLVIENIVKGKKLPEKGRLLQSVMEAGPLLQTLL
Sbjct: 121 DSFFDAVSSTDFSSLNVGDSYNVDPCGLVIENIVKGKKLPEKGRLLQSVMEAGPLLQTLL 180

Query: 181 VAGPLPRWRNPPPLQPFKIPPVLMKGEGVVVNSPRMCSSSMLNFSGVPSESCCLDYSALV 240
           VAGPLP+WRNPPPLQPFKIPPVLMKGEGVVVNSPRMCSSSMLNFSGVPSESCCLD+SALV
Sbjct: 181 VAGPLPQWRNPPPLQPFKIPPVLMKGEGVVVNSPRMCSSSMLNFSGVPSESCCLDHSALV 240

Query: 241 SGSNPSFGCTKRQRL 256
           SGSNPSFGCTKRQRL
Sbjct: 241 SGSNPSFGCTKRQRL 253

[Close]

BLAST of Carg12344 vs. ExPASy TrEMBL
Match: A0A6J1KHI5 (uncharacterized protein LOC111493292 OS=Cucurbita maxima OX=3661 GN=LOC111493292 PE=4 SV=1)

HSP 1 Score: 476.1 bits (1224), Expect = 9.3e-131
Identity = 247/256 (96.48%), Postives = 252/256 (98.44%), Query Frame = 0


Query: 1   MEDFDSFWTYQQGLDEIKQKLLCATIELESAKMEANQEMMKNKESVKNLMNLLQMAYRER 60
           MEDFDS WTYQ+GLDEIKQKLLCATIELESAKMEANQEMMKNKESVKNLMNLLQMAYRER
Sbjct: 26  MEDFDSLWTYQEGLDEIKQKLLCATIELESAKMEANQEMMKNKESVKNLMNLLQMAYRER 85

Query: 61  DEAKNQLQKVLNELMLTSHFQAESPVGKANSSITESNSLSADTFNNNPQSQSQSLGSPVV 120
           DEAKNQLQKVLNELMLTSHFQAESPVGKANSSITESNSLSADTFNNNP  QSQSLGSPVV
Sbjct: 86  DEAKNQLQKVLNELMLTSHFQAESPVGKANSSITESNSLSADTFNNNP--QSQSLGSPVV 145

Query: 121 DSFFDAVSSTDFSSLNVGDSYNVDPCGLVIENIVKGKKLPEKGRLLQSVMEAGPLLQTLL 180
           DSFFDAVSSTDFSSLNVGDSYNVDPCGLVIENIVKGKKLPEKGRLLQSVMEAGPLLQTLL
Sbjct: 146 DSFFDAVSSTDFSSLNVGDSYNVDPCGLVIENIVKGKKLPEKGRLLQSVMEAGPLLQTLL 205

Query: 181 VAGPLPRWRNPPPLQPFKIPPVLMKGEGVVVNSPRMCSSSMLNFSGVPSESCCLDYSALV 240
           VAGPLP+WRNPPPLQPFKIPPVLMKG+GVVVNSPRMCSSSMLNFSGVPSESCCL++SALV
Sbjct: 206 VAGPLPQWRNPPPLQPFKIPPVLMKGQGVVVNSPRMCSSSMLNFSGVPSESCCLNHSALV 265

Query: 241 SGSNPSFGCTKRQRLV 257
           SGSNPSFG TKRQRLV
Sbjct: 266 SGSNPSFGSTKRQRLV 279

[Close]

BLAST of Carg12344 vs. ExPASy TrEMBL
Match: A0A5A7STR2 (TPRXL protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold49G00650 PE=4 SV=1)

HSP 1 Score: 317.8 bits (813), Expect = 4.2e-83
Identity = 186/268 (69.40%), Postives = 211/268 (78.73%), Query Frame = 0


Query: 1   MEDFDSFWTY-QQGLDEIKQKLLCATIELESAKMEANQEMMKNKESVKNLMNLLQMAYRE 60
           MEDF S W+Y Q+G+DE++QKLL  TIELES KMEANQEM+KNKE+VKNL+NLLQ+AY+E
Sbjct: 1   MEDFASLWSYHQEGVDELRQKLLYTTIELESVKMEANQEMIKNKENVKNLLNLLQLAYKE 60

Query: 61  RDEAKNQLQKVLNELMLTSHFQAESPVGKANSSITESNSLSADTFNNNPQSQSQSLGSPV 120
           RDEAKNQL KVLN+L    +FQ ESP+ KANSSITESNSLSAD  NNN  + +   GSPV
Sbjct: 61  RDEAKNQLHKVLNKL----NFQPESPLIKANSSITESNSLSADN-NNNSNTFNNISGSPV 120

Query: 121 VDSFFDAV---SSTDFSSLNVGDSYNVDPCGLVIENIVKGKKLPEKGRLLQSVMEAGPLL 180
           VDSFFDA    S TDFSS NVGDS+NVD C LVIE+IVKGKKLPEKGRLLQSVMEAGPLL
Sbjct: 121 VDSFFDAAAVSSPTDFSSFNVGDSHNVDQCSLVIESIVKGKKLPEKGRLLQSVMEAGPLL 180

Query: 181 QTLLVAGPLPRWRNPPPLQPFKI-PPVLMKGEGVVVNSPRMCSSSMLNFSGVPS-ESCCL 240
           QTLLVAGPLPRWRNPPPLQP K+ PPVL+       ++PRMCSSSMLNFS V   +SCC 
Sbjct: 181 QTLLVAGPLPRWRNPPPLQPMKVLPPVLIN------STPRMCSSSMLNFSNVVGLDSCCF 240

Query: 241 DYSALVSGSNPS-------FGCTKRQRL 256
           + + LVS +  S       F  TKRQRL
Sbjct: 241 NQNGLVSTTTNSSSFASSQFQSTKRQRL 257

[Close]

BLAST of Carg12344 vs. ExPASy TrEMBL
Match: A0A1S3C5Q1 (uncharacterized protein LOC103497200 OS=Cucumis melo OX=3656 GN=LOC103497200 PE=4 SV=1)

HSP 1 Score: 316.2 bits (809), Expect = 1.2e-82
Identity = 185/268 (69.03%), Postives = 211/268 (78.73%), Query Frame = 0


Query: 1   MEDFDSFWTY-QQGLDEIKQKLLCATIELESAKMEANQEMMKNKESVKNLMNLLQMAYRE 60
           MEDF S W+Y Q+G+DE++QKLL  TIELES KMEANQEM+KNKE+VKNL+NLLQ+AY+E
Sbjct: 1   MEDFASLWSYHQEGVDELRQKLLYTTIELESVKMEANQEMIKNKENVKNLLNLLQLAYKE 60

Query: 61  RDEAKNQLQKVLNELMLTSHFQAESPVGKANSSITESNSLSADTFNNNPQSQSQSLGSPV 120
           RDEAKNQL KVLN+L    +FQ ESP+ KANSSITESNSLSAD  NNN  + +   GSPV
Sbjct: 61  RDEAKNQLHKVLNKL----NFQPESPLIKANSSITESNSLSADN-NNNSNTFNNISGSPV 120

Query: 121 VDSFFDAV---SSTDFSSLNVGDSYNVDPCGLVIENIVKGKKLPEKGRLLQSVMEAGPLL 180
           VDSFFDA    S TDFSS NVGDS+NVD C LVIE+IVKGKKLP+KGRLLQSVMEAGPLL
Sbjct: 121 VDSFFDAAAVSSPTDFSSFNVGDSHNVDQCSLVIESIVKGKKLPKKGRLLQSVMEAGPLL 180

Query: 181 QTLLVAGPLPRWRNPPPLQPFKI-PPVLMKGEGVVVNSPRMCSSSMLNFSGVPS-ESCCL 240
           QTLLVAGPLPRWRNPPPLQP K+ PPVL+       ++PRMCSSSMLNFS V   +SCC 
Sbjct: 181 QTLLVAGPLPRWRNPPPLQPMKVLPPVLIN------STPRMCSSSMLNFSNVVGLDSCCF 240

Query: 241 DYSALVSGSNPS-------FGCTKRQRL 256
           + + LVS +  S       F  TKRQRL
Sbjct: 241 NQNGLVSTTTNSSSFASSQFQSTKRQRL 257

[Close]

BLAST of Carg12344 vs. ExPASy TrEMBL
Match: A0A0A0M0C6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G489250 PE=4 SV=1)

HSP 1 Score: 312.4 bits (799), Expect = 1.8e-81
Identity = 183/268 (68.28%), Postives = 209/268 (77.99%), Query Frame = 0


Query: 1   MEDFDSFWTY-QQGLDEIKQKLLCATIELESAKMEANQEMMKNKESVKNLMNLLQMAYRE 60
           MEDF S W+Y Q+G+DE+KQKLL  TIELES KMEANQEM+KNKE+VKNL+NLLQ+AY+E
Sbjct: 1   MEDFASLWSYHQEGVDELKQKLLYTTIELESVKMEANQEMIKNKENVKNLLNLLQLAYKE 60

Query: 61  RDEAKNQLQKVLNELMLTSHFQAESPVGKANSSITESNSLSADTFNNNPQSQSQSLGSPV 120
           RDEA+NQL KVLN+L    +FQ ESP+ KANSSITESNSLSAD  NNN  + +   GSPV
Sbjct: 61  RDEARNQLHKVLNKL----NFQPESPLIKANSSITESNSLSADN-NNNSNTFNNVSGSPV 120

Query: 121 VDSFFDAV---SSTDFSSLNVGDSYNVDPCGLVIENIVKGKKLPEKGRLLQSVMEAGPLL 180
           V+SFFDA    S TDFSS NVGDS+NVD C LVIE+IVKGKKLPEKGRLLQSVMEAGPLL
Sbjct: 121 VESFFDATAVSSPTDFSSFNVGDSHNVDQCSLVIESIVKGKKLPEKGRLLQSVMEAGPLL 180

Query: 181 QTLLVAGPLPRWRNPPPLQPFKI-PPVLMKGEGVVVNSPRMCSSSMLNFSGV-PSESCCL 240
           QTLLVAGPLPRWRNPPPLQP K+ PPVL+       ++PRMCSSSMLNFS     +SCC 
Sbjct: 181 QTLLVAGPLPRWRNPPPLQPMKVLPPVLIN------STPRMCSSSMLNFSNAFGLDSCCF 240

Query: 241 DYSALVSGSNPS-------FGCTKRQRL 256
           + + L S +  S       F  TKRQRL
Sbjct: 241 NQNGLASTTTNSSSFASSQFQSTKRQRL 257

[Close]

BLAST of Carg12344 vs. TAIR 10
Match: AT2G28690.1 (Protein of unknown function (DUF1635) )

HSP 1 Score: 176.4 bits (446), Expect = 2.9e-44
Identity = 113/245 (46.12%), Postives = 151/245 (61.63%), Query Frame = 0


Query: 1   MEDFDSFWTYQQGLDEIKQKLLCATIELESAKMEANQEMMKNKESVKNLMNLLQMAYRER 60
           ME+  S W YQ+ +DE++QKL  ++ ELE+ K +AN+E   ++E VKNL++LL++A +ER
Sbjct: 1   MEELGSIWFYQESMDELRQKLQYSSFELEAVKAKANEETKLHQEEVKNLLHLLKLARQER 60

Query: 61  DEAKNQLQKVLNELMLTSHFQAESPVGKANSSITESNSLSADTFNNNPQSQSQSLGSPVV 120
           DEAK+QLQK+L                K NSSITESN                S GS  V
Sbjct: 61  DEAKDQLQKLLTI--------------KTNSSITESN----------------SHGSSPV 120

Query: 121 DSFFDAVSSTDFSSLN-VGDSYN-----------------VDPCGLVIENIVKGKKLPEK 180
           DSFF+ VSS++FS+ N V +  N                 +DP   +++ I+KGK LPEK
Sbjct: 121 DSFFEPVSSSEFSNFNMVPEPINQVKFKNRQQLVNRNLKKIDPVDALMDEIIKGKALPEK 180

Query: 181 GRLLQSVMEAGPLLQTLLVAGPLPRWRNPPPL-QPFKIPPVLMKGEGVVVNSPRMCSSSM 227
           G+LLQ+VME+GPLLQTLLVAGPLPRWRNPPPL Q F++PP+     G +   P   ++SM
Sbjct: 181 GKLLQTVMESGPLLQTLLVAGPLPRWRNPPPLQQSFRVPPI-SNSYGCL---PATTTTSM 211

[Close]

BLAST of Carg12344 vs. TAIR 10
Match: AT5G59760.1 (Protein of unknown function (DUF1635) )

HSP 1 Score: 120.6 bits (301), Expect = 1.9e-27
Identity = 93/259 (35.91%), Postives = 134/259 (51.74%), Query Frame = 0


Query: 4   FDSFWTYQQGLDEIKQKLLCATIELESAKMEANQEMMKNKESVKNLMNLLQMAYRERDEA 63
           + S W +Q+ +DE++Q L     ELE+ KMEAN++   ++E V  L+NLL+   +ERDEA
Sbjct: 5   YSSNWLHQESIDEMRQNLQSTLFELETLKMEANEKSRTHREEVNQLLNLLKFTQQERDEA 64

Query: 64  KNQLQKVLNELMLTSHFQAESPVGKANSSITESNSLSADTFNNNPQSQSQSLGSPVVDSF 123
           + QL          S F   +     + S+T+SNS S         SQ  S  S    S 
Sbjct: 65  RQQL----------SQFIFHTQQNPNSRSLTKSNSFS--------HSQDVSSSSSSELST 124

Query: 124 FDAVSSTDFSSLNVGDSYN----VDPCGLVIENIVKGKKLPEKGRLLQSVMEAGPLLQTL 183
           F  +     ++L    ++N    +DP    ++ +V GK  PE G+LL++V+EAGPLL+TL
Sbjct: 125 FLNIHPQPLTNLEDPTAHNHHQQIDP----LDVLVMGKAFPETGKLLKAVVEAGPLLETL 184

Query: 184 LVAGPLPRWRNPPP---LQPFKIPPVLMKGEGVVVNSPRMCSSSMLNFSGVPSESCCLDY 243
           L+AGPLP+W NPPP    Q F++P +  +G  V      M  S  +N  G  S S  +D 
Sbjct: 185 LLAGPLPKWINPPPQTQSQRFELPSISFRGSDVDSKCDSMTCSGSVNSFGFGS-SLVIDQ 231

Query: 244 SALVSGSNPSFGCTKRQRL 256
           S L           KRQRL
Sbjct: 245 SMLTG---------KRQRL 231

[Close]

BLAST of Carg12344 vs. TAIR 10
Match: AT5G22930.1 (Protein of unknown function (DUF1635) )

HSP 1 Score: 99.8 bits (247), Expect = 3.5e-21
Identity = 70/203 (34.48%), Postives = 117/203 (57.64%), Query Frame = 0


Query: 7   FWTYQQGLDEIKQKLLCATIELESAKMEANQEMMKNKESVKNLMNLLQMAYRERDEAKNQ 66
           ++++ +  +EI+Q LL  T+EL+  KM A +E+ K  E + +L ++L    +ERDEA  +
Sbjct: 13  YYSHAKTTEEIRQSLLYTTLELDQTKMFAYEEIRKRDEQLIHLKDILTKTIKERDEALEK 72

Query: 67  LQKVLNELMLTSHFQAESPVGKANSSITESNSLSADTFNNNPQSQS---QSLGSPVVDSF 126
            Q+++ +       +  +P     SSI +         +N   S S   +S+ SP     
Sbjct: 73  CQRLMFDSHSLQQQKHMTPPLSGASSIEDEQVQPQQLRSNKSFSSSDCEESIMSPT---- 132

Query: 127 FDAVSSTDFSSLNVGDSYNVDPCGLVIENIVKGKKLPEKGRLLQSVMEAGPLLQTLLVAG 186
            D + +     L       V    ++++ +++ K LPEKG+LLQ+V++AGPLLQTLL+AG
Sbjct: 133 -DHIMNPPPCQLE-----EVSGTEIIMDPLLQDKPLPEKGKLLQAVIKAGPLLQTLLLAG 192

Query: 187 PLPRWRN-PPPLQPFKIPPVLMK 206
           PLP+WR+ PPPL+ F+IPPV ++
Sbjct: 193 PLPQWRHPPPPLKSFEIPPVTVQ 205

[Close]

BLAST of Carg12344 vs. TAIR 10
Match: AT3G44940.1 (Protein of unknown function (DUF1635) )

HSP 1 Score: 92.4 bits (228), Expect = 5.5e-19
Identity = 71/204 (34.80%), Postives = 113/204 (55.39%), Query Frame = 0


Query: 8   WTY---QQGLDEIKQKLLCATIELESAKMEANQEMMKNKESVKNLMNLLQMAYRERDEAK 67
           WTY    +  +E++Q L+  T+ELE  K+ A++E+ K  E + +L ++L    +ERDEA 
Sbjct: 10  WTYFSHGKTTEELRQTLVYTTMELEQTKLVAHEELRKRDEQLIHLEDVLTKTLKERDEAL 69

Query: 68  NQLQKVLNELMLTSHFQAESPVGKANSSITESNSLSADTFNNNPQSQSQSLGSPVVDSFF 127
            +   +L   +L    Q ++   K        +  S+   +   Q Q   L S    SF 
Sbjct: 70  EKYNHLLLNNLLLQQKQQQNQNQKQELVTPPLSGASSIIEDEQVQPQQPQLNSN--KSFS 129

Query: 128 DAVSSTDFSSLNVGD----SYNVDPCG-LVIENIVKGKKLPEKGRLLQSVMEAGPLLQTL 187
            + +     S +V D    +  ++  G  ++  ++  K LPEKG+LLQ+V++AGPLLQTL
Sbjct: 130 SSDTEESIMSPSVIDPVTMNQQIEVSGDEMLATLLPDKPLPEKGKLLQAVIKAGPLLQTL 189

Query: 188 LVAGPLPRWRN-PPPLQPFKIPPV 203
           L+AGPLP+WR+ PPPL+  +IPPV
Sbjct: 190 LLAGPLPQWRHPPPPLETSEIPPV 211

[Close]

BLAST of Carg12344 vs. TAIR 10
Match: AT2G28140.1 (Protein of unknown function (DUF1635) )

HSP 1 Score: 84.7 bits (208), Expect = 1.2e-16
Identity = 63/204 (30.88%), Postives = 108/204 (52.94%), Query Frame = 0


Query: 8   WTYQ-----QGLDEIKQKLLCATIELESAKMEANQEMMKNKESVKNLMNLLQMAYRERDE 67
           W++Q     + ++E++  LL  T+ELE  +M A++E++   + +  L +LL  A +E+DE
Sbjct: 12  WSHQNQCGIKTIEELRHSLLHTTMELEQTRMVASEELIAKDDQIMQLKDLLNKAIKEKDE 71

Query: 68  AKNQLQKVLNELMLTSHFQAESPVGKANSSITESNSLSADTFNNNPQSQSQSLGSPVVDS 127
           A+ + +++L +       Q +           E    + + F+++   +S      +V S
Sbjct: 72  AQERYKRILLDQNFLLQHQTD-----------EEQDPNINGFHSSDGEES------IVSS 131

Query: 128 FFDAVS-STDFSSLNVGDSYNVDPCGLVIENIVKGKKLPEKGRLLQSVMEAGPLLQTLLV 187
           F   V    DF  +                       LPEKG+LL++V++AGPLLQTLL+
Sbjct: 132 FEPPVEIELDFPEMT----------------------LPEKGKLLKAVVKAGPLLQTLLL 176

Query: 188 AGPLPRWRNPPP-LQPFKIPPVLM 205
           AG LP+WR+PPP L+ F+IPPV++
Sbjct: 192 AGQLPQWRHPPPQLESFEIPPVII 176

The following BLAST results are available for this feature:

BLAST of Carg12344 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6593425.1	4.7e-137	100.00	hypothetical protein SDJN03_12901, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022949510.1	4.6e-132	97.65	uncharacterized protein LOC111452838 [Cucurbita moschata]	[more]
XP_022998708.1	1.9e-130	96.48	uncharacterized protein LOC111493292 [Cucurbita maxima]	[more]
XP_023523158.1	5.8e-127	94.59	uncharacterized protein LOC111787431 [Cucurbita pepo subsp. pepo]	[more]
XP_038894989.1	3.7e-89	73.00	uncharacterized protein LOC120083342 isoform X1 [Benincasa hispida]	[more]

BLAST of Carg12344 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg12344 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GCY4	2.2e-132	97.65	uncharacterized protein LOC111452838 OS=Cucurbita moschata OX=3662 GN=LOC1114528...	[more]
A0A6J1KHI5	9.3e-131	96.48	uncharacterized protein LOC111493292 OS=Cucurbita maxima OX=3661 GN=LOC111493292...	[more]
A0A5A7STR2	4.2e-83	69.40	TPRXL protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold49G00650 P...	[more]
A0A1S3C5Q1	1.2e-82	69.03	uncharacterized protein LOC103497200 OS=Cucumis melo OX=3656 GN=LOC103497200 PE=...	[more]
A0A0A0M0C6	1.8e-81	68.28	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G489250 PE=4 SV=1	[more]

BLAST of Carg12344 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G28690.1	2.9e-44	46.12	Protein of unknown function (DUF1635)	[more]
AT5G59760.1	1.9e-27	35.91	Protein of unknown function (DUF1635)	[more]
AT5G22930.1	3.5e-21	34.48	Protein of unknown function (DUF1635)	[more]
AT3G44940.1	5.5e-19	34.80	Protein of unknown function (DUF1635)	[more]
AT2G28140.1	1.2e-16	30.88	Protein of unknown function (DUF1635)	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 14..34
None	No IPR available	COILS	Coil	Coil	coord: 46..73
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 86..116
None	No IPR available	PANTHER	PTHR33431:SF12	HIGH MOBILITY GROUP BOX PROTEIN, PUTATIVE (DUF1635)-RELATED	coord: 1..213
IPR012862	Protein of unknown function DUF1635	PFAM	PF07795	DUF1635	coord: 13..230 e-value: 4.5E-56 score: 190.2
IPR012862	Protein of unknown function DUF1635	PANTHER	PTHR33431	ENABLED-LIKE PROTEIN (DUF1635)	coord: 1..213

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg12344-RA	Carg12344-RA	mRNA