Carg12342 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg12342
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	MYB domain class transcription factor
Location	Carg_Chr01: 3039639 .. 3040503 (+)
RNA-Seq Expression	Carg12342
Synteny	Carg12342

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGCAAGAGGAAAGTGTCAGAAAAGGGCCATGGACAGAGCAAGAGGACTTCCAATTGGTCTGCTTTGTTGGTTTGTTCGGTGATCGCCGGTGGGATTTCATCGCCAAAGTATCAGGTTTGAAGGTGGCGGGAGAGTACAAATTATAGGTAGGGTTTATTAAAACCCCCCCTTCTCCTCCTCCTCCTCCTCCTCCACCTCCTTTTAACCTCTCCCTTTCTCCTCCCTTGCAGGCCTGAAAAGAAATGGTAAAAGCTGCCGTCTCCGGTGGGTTAACTACCTCCACCCCGGTCTCAAGCGCGGCAAGATGTCTCCCCAAGAAGAGCGCCTTGTCCTCGACCTCCACTCCAAGTGGGGCAACAGGTGAATACGAGTGCTCATGCTCAAAATGGATAATATCATACAATTGTGGAGAGTCGTGATTCCTAACATTGATTCTAACGTTTTTTTTTTTAAATTTTTAGATGGTCTAAGATTGCTCGGAAGCTCCCGGGACGAACGGATAATGAAATCAAGAATTTTTGGCGAACCCATGTGAGAAAATTGGCGCAAGAGAAAAAGAAAGCGGCGGTTCATCATGTTGTGGTGTCGCCGTCGTCCTCGTCGACGGTTGACTCGGTCCCGACGATTGATATCGGAGAAGAGAGCTTCTACGACACGGGTGGGGATTGGTCATGTTATATGGGTGATGAGGATGAAAAGGGTTACTCTTATTCGATGGATGATATTTGGAGAGATATTGATGATCAGAGTGTTGTAAAGGAGGTTTGTGATGAGAAGTTGAGCTGTGGTCCAGTGGCATCTCCGGCGCCGTGGGAGTACTCGCCGCCGTGGAAGGTGGCGGAGGAAAAGTTTGGGATTTGA

mRNA sequence

ATGGTGCAAGAGGAAAGTGTCAGAAAAGGGCCATGGACAGAGCAAGAGGACTTCCAATTGGTCTGCTTTGTTGGTTTGTTCGGTGATCGCCGGTGGGATTTCATCGCCAAAGTATCAGGCCTGAAAAGAAATGGTAAAAGCTGCCGTCTCCGGTGGGTTAACTACCTCCACCCCGGTCTCAAGCGCGGCAAGATGTCTCCCCAAGAAGAGCGCCTTGTCCTCGACCTCCACTCCAAGTGGGGCAACAGATGGTCTAAGATTGCTCGGAAGCTCCCGGGACGAACGGATAATGAAATCAAGAATTTTTGGCGAACCCATGTGAGAAAATTGGCGCAAGAGAAAAAGAAAGCGGCGGTTCATCATGTTGTGGTGTCGCCGTCGTCCTCGTCGACGGTTGACTCGGTCCCGACGATTGATATCGGAGAAGAGAGCTTCTACGACACGGGTGGGGATTGGTCATGTTATATGGGTGATGAGGATGAAAAGGGTTACTCTTATTCGATGGATGATATTTGGAGAGATATTGATGATCAGAGTGTTGTAAAGGAGGTTTGTGATGAGAAGTTGAGCTGTGGTCCAGTGGCATCTCCGGCGCCGTGGGAGTACTCGCCGCCGTGGAAGGTGGCGGAGGAAAAGTTTGGGATTTGA

Coding sequence (CDS)

ATGGTGCAAGAGGAAAGTGTCAGAAAAGGGCCATGGACAGAGCAAGAGGACTTCCAATTGGTCTGCTTTGTTGGTTTGTTCGGTGATCGCCGGTGGGATTTCATCGCCAAAGTATCAGGCCTGAAAAGAAATGGTAAAAGCTGCCGTCTCCGGTGGGTTAACTACCTCCACCCCGGTCTCAAGCGCGGCAAGATGTCTCCCCAAGAAGAGCGCCTTGTCCTCGACCTCCACTCCAAGTGGGGCAACAGATGGTCTAAGATTGCTCGGAAGCTCCCGGGACGAACGGATAATGAAATCAAGAATTTTTGGCGAACCCATGTGAGAAAATTGGCGCAAGAGAAAAAGAAAGCGGCGGTTCATCATGTTGTGGTGTCGCCGTCGTCCTCGTCGACGGTTGACTCGGTCCCGACGATTGATATCGGAGAAGAGAGCTTCTACGACACGGGTGGGGATTGGTCATGTTATATGGGTGATGAGGATGAAAAGGGTTACTCTTATTCGATGGATGATATTTGGAGAGATATTGATGATCAGAGTGTTGTAAAGGAGGTTTGTGATGAGAAGTTGAGCTGTGGTCCAGTGGCATCTCCGGCGCCGTGGGAGTACTCGCCGCCGTGGAAGGTGGCGGAGGAAAAGTTTGGGATTTGA

Protein sequence

MVQEESVRKGPWTEQEDFQLVCFVGLFGDRRWDFIAKVSGLKRNGKSCRLRWVNYLHPGLKRGKMSPQEERLVLDLHSKWGNRWSKIARKLPGRTDNEIKNFWRTHVRKLAQEKKKAAVHHVVVSPSSSSTVDSVPTIDIGEESFYDTGGDWSCYMGDEDEKGYSYSMDDIWRDIDDQSVVKEVCDEKLSCGPVASPAPWEYSPPWKVAEEKFGI

Homology

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BLAST of Carg12342 vs. NCBI nr
Match: KAG6607214.1 (Transcription factor MYB48, partial [Cucurbita argyrosperma subsp. sororia] >KAG7036899.1 Transcription factor MYB48, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 457.6 bits (1176), Expect = 5.9e-125
Identity = 215/215 (100.00%), Postives = 215/215 (100.00%), Query Frame = 0


Query: 1   MVQEESVRKGPWTEQEDFQLVCFVGLFGDRRWDFIAKVSGLKRNGKSCRLRWVNYLHPGL 60
           MVQEESVRKGPWTEQEDFQLVCFVGLFGDRRWDFIAKVSGLKRNGKSCRLRWVNYLHPGL
Sbjct: 1   MVQEESVRKGPWTEQEDFQLVCFVGLFGDRRWDFIAKVSGLKRNGKSCRLRWVNYLHPGL 60

Query: 61  KRGKMSPQEERLVLDLHSKWGNRWSKIARKLPGRTDNEIKNFWRTHVRKLAQEKKKAAVH 120
           KRGKMSPQEERLVLDLHSKWGNRWSKIARKLPGRTDNEIKNFWRTHVRKLAQEKKKAAVH
Sbjct: 61  KRGKMSPQEERLVLDLHSKWGNRWSKIARKLPGRTDNEIKNFWRTHVRKLAQEKKKAAVH 120

Query: 121 HVVVSPSSSSTVDSVPTIDIGEESFYDTGGDWSCYMGDEDEKGYSYSMDDIWRDIDDQSV 180
           HVVVSPSSSSTVDSVPTIDIGEESFYDTGGDWSCYMGDEDEKGYSYSMDDIWRDIDDQSV
Sbjct: 121 HVVVSPSSSSTVDSVPTIDIGEESFYDTGGDWSCYMGDEDEKGYSYSMDDIWRDIDDQSV 180

Query: 181 VKEVCDEKLSCGPVASPAPWEYSPPWKVAEEKFGI 216
           VKEVCDEKLSCGPVASPAPWEYSPPWKVAEEKFGI
Sbjct: 181 VKEVCDEKLSCGPVASPAPWEYSPPWKVAEEKFGI 215

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BLAST of Carg12342 vs. NCBI nr
Match: XP_022949511.1 (transcription factor MYB48-like [Cucurbita moschata])

HSP 1 Score: 448.0 bits (1151), Expect = 4.7e-122
Identity = 212/218 (97.25%), Postives = 214/218 (98.17%), Query Frame = 0


Query: 1   MVQEESVRKGPWTEQEDFQLVCFVGLFGDRRWDFIAKVSGLKRNGKSCRLRWVNYLHPGL 60
           MVQEES+RKGPWTEQEDFQLVCFVGLFGDRRWDFIAKVSGLKRNGKSCRLRWVNYLHPGL
Sbjct: 1   MVQEESIRKGPWTEQEDFQLVCFVGLFGDRRWDFIAKVSGLKRNGKSCRLRWVNYLHPGL 60

Query: 61  KRGKMSPQEERLVLDLHSKWGNRWSKIARKLPGRTDNEIKNFWRTHVRKLAQEKKKAAVH 120
           KRGKMSPQEERLVLDLHSKWGNRWSKIARKLPGRTDNEIKNFWRTHVRKLAQEKKKAAVH
Sbjct: 61  KRGKMSPQEERLVLDLHSKWGNRWSKIARKLPGRTDNEIKNFWRTHVRKLAQEKKKAAVH 120

Query: 121 HVVVSPSSSSTVDSVPTIDIGEESFYDTGGDWSCYMGDEDEKGYSYSMDDIWRDIDDQSV 180
           HVVVSPSSSSTVDSVPTIDIGEESFYDTGGDWSCYMG+EDEKGYSYSMDDIWRDIDDQSV
Sbjct: 121 HVVVSPSSSSTVDSVPTIDIGEESFYDTGGDWSCYMGEEDEKGYSYSMDDIWRDIDDQSV 180

Query: 181 VKEVCDEKLSCGPVASPAPW---EYSPPWKVAEEKFGI 216
           VK VCDEKLSCGPVASPAPW   EYSPPWKVAEEKFGI
Sbjct: 181 VKAVCDEKLSCGPVASPAPWEYGEYSPPWKVAEEKFGI 218

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BLAST of Carg12342 vs. NCBI nr
Match: XP_023523177.1 (transcription factor MYB48-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 447.2 bits (1149), Expect = 8.0e-122
Identity = 212/218 (97.25%), Postives = 214/218 (98.17%), Query Frame = 0


Query: 1   MVQEESVRKGPWTEQEDFQLVCFVGLFGDRRWDFIAKVSGLKRNGKSCRLRWVNYLHPGL 60
           MVQEESVRKGPWTEQEDFQLVCFVGLFGDRRWDFIAKVSGLKRNGKSCRLRWVNYLHPGL
Sbjct: 1   MVQEESVRKGPWTEQEDFQLVCFVGLFGDRRWDFIAKVSGLKRNGKSCRLRWVNYLHPGL 60

Query: 61  KRGKMSPQEERLVLDLHSKWGNRWSKIARKLPGRTDNEIKNFWRTHVRKLAQEKKKAAVH 120
           KRGKMSPQEERLVLDLHSKWGNRWSKIARKLPGRTDNEIKNFWRTHVRKLAQEKKKAAVH
Sbjct: 61  KRGKMSPQEERLVLDLHSKWGNRWSKIARKLPGRTDNEIKNFWRTHVRKLAQEKKKAAVH 120

Query: 121 HVVVSPSSSSTVDSVPTIDIGEESFYDTGGDWSCYMGDEDEKGYSYSMDDIWRDIDDQSV 180
           HVVVSPSSSSTVDSVPTIDIGEESFYDTGGDWSCYMG+EDEKGYSYSMDDIWRDIDD+SV
Sbjct: 121 HVVVSPSSSSTVDSVPTIDIGEESFYDTGGDWSCYMGEEDEKGYSYSMDDIWRDIDDESV 180

Query: 181 VKEVCDEKLSCGPVASPAPW---EYSPPWKVAEEKFGI 216
           VK VCDEKLSCGPVASPAPW   EYSPPWKVAEEKFGI
Sbjct: 181 VKAVCDEKLSCGPVASPAPWEYGEYSPPWKVAEEKFGI 218

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BLAST of Carg12342 vs. NCBI nr
Match: XP_022998725.1 (transcription factor MYB48-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 443.0 bits (1138), Expect = 1.5e-120
Identity = 210/218 (96.33%), Postives = 212/218 (97.25%), Query Frame = 0


Query: 1   MVQEESVRKGPWTEQEDFQLVCFVGLFGDRRWDFIAKVSGLKRNGKSCRLRWVNYLHPGL 60
           MVQEES+RKGPWTEQEDFQLVCFVGLFGDRRWDFIAKVSGLKRNGKSCRLRWVNYLHPGL
Sbjct: 1   MVQEESIRKGPWTEQEDFQLVCFVGLFGDRRWDFIAKVSGLKRNGKSCRLRWVNYLHPGL 60

Query: 61  KRGKMSPQEERLVLDLHSKWGNRWSKIARKLPGRTDNEIKNFWRTHVRKLAQEKKKAAVH 120
           KRGKMSPQEERLVLDLHSKWGNRWSKIARKLPGRTDNEIKNFWRTHVRKLAQEKKKAAVH
Sbjct: 61  KRGKMSPQEERLVLDLHSKWGNRWSKIARKLPGRTDNEIKNFWRTHVRKLAQEKKKAAVH 120

Query: 121 HVVVSPSSSSTVDSVPTIDIGEESFYDTGGDWSCYMGDEDEKGYSYSMDDIWRDIDDQSV 180
           HVVVSPSSSSTVDSVPTIDIGEESFYDTGGDWSCYMG+EDEKGYSYSMDDIWRDIDDQSV
Sbjct: 121 HVVVSPSSSSTVDSVPTIDIGEESFYDTGGDWSCYMGEEDEKGYSYSMDDIWRDIDDQSV 180

Query: 181 VKEVCDEKLSCGPVASPAPW---EYSPPWKVAEEKFGI 216
           VK VCDEKLSCGPVASPAPW   EYSPPWKVAEE F I
Sbjct: 181 VKAVCDEKLSCGPVASPAPWEYGEYSPPWKVAEENFRI 218

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BLAST of Carg12342 vs. NCBI nr
Match: XP_022998726.1 (transcription factor MYB48-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 360.9 bits (925), Expect = 7.5e-96
Identity = 172/182 (94.51%), Postives = 175/182 (96.15%), Query Frame = 0


Query: 37  KVSGLKRNGKSCRLRWVNYLHPGLKRGKMSPQEERLVLDLHSKWGNRWSKIARKLPGRTD 96
           ++ GLKRNGKSCRLRWVNYLHPGLKRGKMSPQEERLVLDLHSKWGNRWSKIARKLPGRTD
Sbjct: 37  QIIGLKRNGKSCRLRWVNYLHPGLKRGKMSPQEERLVLDLHSKWGNRWSKIARKLPGRTD 96

Query: 97  NEIKNFWRTHVRKLAQEKKKAAVHHVVVSPSSSSTVDSVPTIDIGEESFYDTGGDWSCYM 156
           NEIKNFWRTHVRKLAQEKKKAAVHHVVVSPSSSSTVDSVPTIDIGEESFYDTGGDWSCYM
Sbjct: 97  NEIKNFWRTHVRKLAQEKKKAAVHHVVVSPSSSSTVDSVPTIDIGEESFYDTGGDWSCYM 156

Query: 157 GDEDEKGYSYSMDDIWRDIDDQSVVKEVCDEKLSCGPVASPAPW---EYSPPWKVAEEKF 216
           G+EDEKGYSYSMDDIWRDIDDQSVVK VCDEKLSCGPVASPAPW   EYSPPWKVAEE F
Sbjct: 157 GEEDEKGYSYSMDDIWRDIDDQSVVKAVCDEKLSCGPVASPAPWEYGEYSPPWKVAEENF 216

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BLAST of Carg12342 vs. ExPASy Swiss-Prot
Match: Q9LX82 (Transcription factor MYB48 OS=Arabidopsis thaliana OX=3702 GN=MYB48 PE=2 SV=1)

HSP 1 Score: 250.8 bits (639), Expect = 1.4e-65
Identity = 140/222 (63.06%), Postives = 158/222 (71.17%), Query Frame = 0


Query: 1   MVQEESVRKGPWTEQEDFQLVCFVGLFGDRRWDFIAKVSGLKRNGKSCRLRWVNYLHPGL 60
           M+QEE  RKGPWTEQED  LV FV LFGDRRWDFIAKVSGL R GKSCRLRWVNYLHPGL
Sbjct: 1   MMQEEGNRKGPWTEQEDILLVNFVHLFGDRRWDFIAKVSGLNRTGKSCRLRWVNYLHPGL 60

Query: 61  KRGKMSPQEERLVLDLHSKWGNRWSKIARKLPGRTDNEIKNFWRTHVRKLAQEKKKAAVH 120
           KRGKM+PQEERLVL+LH+KWGNRWSKIARKLPGRTDNEIKN+WRTH+RK AQEKK+    
Sbjct: 61  KRGKMTPQEERLVLELHAKWGNRWSKIARKLPGRTDNEIKNYWRTHMRKKAQEKKRPVSP 120

Query: 121 HVVVSPSSSSTVDSVPT----------IDIGEESFYDTGGDWSC-YMGDEDEKGYSYSMD 180
               S  SSS+V +  T             GE SFYDTGG  S   M  E+E    YS+D
Sbjct: 121 TSSFSNCSSSSVTTTTTNTQDTSCHSRKSSGEVSFYDTGGSRSTREMNQENED--VYSLD 180

Query: 181 DIWRDIDDQSV-----VKEVCDEK---LSCGPVASPAPWEYS 204
           DIWR+ID  +V     VK++  E+   LS   +ASP+ WE S
Sbjct: 181 DIWREIDHSAVNIIKPVKDIYSEQSHCLSYPNLASPS-WESS 219

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BLAST of Carg12342 vs. ExPASy Swiss-Prot
Match: Q4JL84 (Transcription factor MYB59 OS=Arabidopsis thaliana OX=3702 GN=MYB59 PE=2 SV=2)

HSP 1 Score: 242.3 bits (617), Expect = 5.1e-63
Identity = 135/212 (63.68%), Postives = 156/212 (73.58%), Query Frame = 0


Query: 1   MVQEESVRKGPWTEQEDFQLVCFVGLFGDRRWDFIAKVSGLKRNGKSCRLRWVNYLHPGL 60
           +VQEE  RKGPWTEQED  LV FV LFGDRRWDF+AKVSGL R GKSCRLRWVNYLHPGL
Sbjct: 3   LVQEE-YRKGPWTEQEDILLVNFVHLFGDRRWDFVAKVSGLNRTGKSCRLRWVNYLHPGL 62

Query: 61  KRGKMSPQEERLVLDLHSKWGNRWSKIARKLPGRTDNEIKNFWRTHVRKLAQEKKKAAVH 120
           KRGKM+PQEERLVL+LH+KWGNRWSKIARKLPGRTDNEIKN+WRTH+RK AQEKK+    
Sbjct: 63  KRGKMTPQEERLVLELHAKWGNRWSKIARKLPGRTDNEIKNYWRTHMRKKAQEKKRP--- 122

Query: 121 HVVVSPSSSSTVDSVPTIDIGEESFYDTGGDWSCYMGDEDEKGYSYSMDDIWRDIDDQ-- 180
              +SP+SSS+  +  +  +   +  DTGG  +  M  E E GY YSMDDIWR+ID    
Sbjct: 123 ---MSPTSSSS--NCCSSSMTTTTSQDTGGS-NGKMNQECEDGY-YSMDDIWREIDQSGA 182

Query: 181 SVVKEVCDE-------KLSCGPVASPAPWEYS 204
           +V+K V D         L+  P+ASP  WE S
Sbjct: 183 NVIKPVKDNYYSEQSCYLNFPPLASPT-WESS 202

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BLAST of Carg12342 vs. ExPASy Swiss-Prot
Match: Q4JL76 (Myb-related protein MYBAS2 OS=Oryza sativa subsp. japonica OX=39947 GN=MYBAS2 PE=2 SV=1)

HSP 1 Score: 222.2 bits (565), Expect = 5.5e-57
Identity = 116/217 (53.46%), Postives = 143/217 (65.90%), Query Frame = 0


Query: 5   ESVRKGPWTEQEDFQLVCFVGLFGDRRWDFIAKVSGLKRNGKSCRLRWVNYLHPGLKRGK 64
           E +RKGPWTEQED QLVC V LFG+RRWDFIAKVSGL R GKSCRLRWVNYLHPGLKRG+
Sbjct: 6   EEIRKGPWTEQEDLQLVCTVRLFGERRWDFIAKVSGLNRTGKSCRLRWVNYLHPGLKRGR 65

Query: 65  MSPQEERLVLDLHSKWGNRWSKIARKLPGRTDNEIKNFWRTHVRKLAQEKKKAAVHHVVV 124
           MSP EERL+L+LH++WGNRWS+IAR+LPGRTDNEIKN+WRTH+RK AQE+K        +
Sbjct: 66  MSPHEERLILELHARWGNRWSRIARRLPGRTDNEIKNYWRTHMRKKAQERKSN------M 125

Query: 125 SPSSSSTV-------DSVPTIDIG--EESFYDTGGDWSCYMGDEDEKGYSYSMDDIWRDI 184
           SPSSSS+           P++ IG  E+  +   G  +  M         Y MD IW +I
Sbjct: 126 SPSSSSSSLTYQSCHPETPSMIIGIEEQELHGGSGCITSIMKSTPVDMDGYPMDQIWMEI 185

Query: 185 DDQSVVKEVCDEKLS-------CGPVASPAPWEYSPP 206
           +  +V+   C ++          GP+     W+Y  P
Sbjct: 186 EAPNVLPGPCFDEAKDSASNSLSGPLLPYPMWDYYCP 216

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BLAST of Carg12342 vs. ExPASy Swiss-Prot
Match: Q53NK6 (Myb-related protein MYBAS1 OS=Oryza sativa subsp. japonica OX=39947 GN=MYBAS1 PE=2 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 6.1e-56
Identity = 114/227 (50.22%), Postives = 147/227 (64.76%), Query Frame = 0


Query: 5   ESVRKGPWTEQEDFQLVCFVGLFGDRRWDFIAKVSGLKRNGKSCRLRWVNYLHPGLKRGK 64
           E +RKGPWTEQED QLVC V LFGDRRWDF+AKVSGL R GKSCRLRWVNYLHPGLK G+
Sbjct: 6   EEMRKGPWTEQEDLQLVCTVRLFGDRRWDFVAKVSGLNRTGKSCRLRWVNYLHPGLKHGR 65

Query: 65  MSPQEERLVLDLHSKWGNRWSKIARKLPGRTDNEIKNFWRTHVRKLAQEKKKAAVHHVVV 124
           MSP+EE L+++LH++WGNRWS+IAR+LPGRTDNEIKN+WRTH+RK AQE++        +
Sbjct: 66  MSPKEEHLIIELHARWGNRWSRIARRLPGRTDNEIKNYWRTHMRKKAQERRGD------M 125

Query: 125 SPSSSST--------VDSVPTIDIGEESFYDTGGDWSCYMGDEDEKGYSYSMDDIWRDID 184
           SPSSSS+        +D+VP I +     +D     +  +         Y+MD IW++I+
Sbjct: 126 SPSSSSSSLVYQSCLLDTVPIISMDGGDIHDDRSCMARVLKSTQSVMDGYTMDQIWKEIE 185

Query: 185 DQSVV--------KEVCDEKLSCGPVASPAPWEYSPP---WKVAEEK 213
                        K+     L C P+ +    +YS P   WK+  E+
Sbjct: 186 APGAPSLLGIDEGKDKACSNLPC-PLLTSTMSDYSCPEVFWKIDNEE 225

[Close]

BLAST of Carg12342 vs. ExPASy Swiss-Prot
Match: Q9SCP1 (Transcription factor MYB27 OS=Arabidopsis thaliana OX=3702 GN=MYB27 PE=2 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 1.1e-41
Identity = 73/107 (68.22%), Postives = 92/107 (85.98%), Query Frame = 0


Query: 3   QEESVRKGPWTEQEDFQLVCFVGLFGDRRWDFIAKVSGLKRNGKSCRLRWVNYLHPGLKR 62
           +EE++R+GPW E+ED +LV  + L G+RRWD +A VSGLKR+GKSCRLRW+NYL+P LKR
Sbjct: 5   KEETLRRGPWLEEEDERLVKVISLLGERRWDSLAIVSGLKRSGKSCRLRWMNYLNPTLKR 64

Query: 63  GKMSPQEERLVLDLHSKWGNRWSKIARKLPGRTDNEIKNFWRTHVRK 110
           G MS +EER++  LH+ WGN+WSKIAR+LPGRTDNEIKN+WRTH RK
Sbjct: 65  GPMSQEEERIIFQLHALWGNKWSKIARRLPGRTDNEIKNYWRTHYRK 111

[Close]

BLAST of Carg12342 vs. ExPASy TrEMBL
Match: A0A6J1GC76 (transcription factor MYB48-like OS=Cucurbita moschata OX=3662 GN=LOC111452839 PE=4 SV=1)

HSP 1 Score: 448.0 bits (1151), Expect = 2.3e-122
Identity = 212/218 (97.25%), Postives = 214/218 (98.17%), Query Frame = 0


Query: 1   MVQEESVRKGPWTEQEDFQLVCFVGLFGDRRWDFIAKVSGLKRNGKSCRLRWVNYLHPGL 60
           MVQEES+RKGPWTEQEDFQLVCFVGLFGDRRWDFIAKVSGLKRNGKSCRLRWVNYLHPGL
Sbjct: 1   MVQEESIRKGPWTEQEDFQLVCFVGLFGDRRWDFIAKVSGLKRNGKSCRLRWVNYLHPGL 60

Query: 61  KRGKMSPQEERLVLDLHSKWGNRWSKIARKLPGRTDNEIKNFWRTHVRKLAQEKKKAAVH 120
           KRGKMSPQEERLVLDLHSKWGNRWSKIARKLPGRTDNEIKNFWRTHVRKLAQEKKKAAVH
Sbjct: 61  KRGKMSPQEERLVLDLHSKWGNRWSKIARKLPGRTDNEIKNFWRTHVRKLAQEKKKAAVH 120

Query: 121 HVVVSPSSSSTVDSVPTIDIGEESFYDTGGDWSCYMGDEDEKGYSYSMDDIWRDIDDQSV 180
           HVVVSPSSSSTVDSVPTIDIGEESFYDTGGDWSCYMG+EDEKGYSYSMDDIWRDIDDQSV
Sbjct: 121 HVVVSPSSSSTVDSVPTIDIGEESFYDTGGDWSCYMGEEDEKGYSYSMDDIWRDIDDQSV 180

Query: 181 VKEVCDEKLSCGPVASPAPW---EYSPPWKVAEEKFGI 216
           VK VCDEKLSCGPVASPAPW   EYSPPWKVAEEKFGI
Sbjct: 181 VKAVCDEKLSCGPVASPAPWEYGEYSPPWKVAEEKFGI 218

[Close]

BLAST of Carg12342 vs. ExPASy TrEMBL
Match: A0A6J1KDA1 (transcription factor MYB48-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111493304 PE=4 SV=1)

HSP 1 Score: 443.0 bits (1138), Expect = 7.3e-121
Identity = 210/218 (96.33%), Postives = 212/218 (97.25%), Query Frame = 0


Query: 1   MVQEESVRKGPWTEQEDFQLVCFVGLFGDRRWDFIAKVSGLKRNGKSCRLRWVNYLHPGL 60
           MVQEES+RKGPWTEQEDFQLVCFVGLFGDRRWDFIAKVSGLKRNGKSCRLRWVNYLHPGL
Sbjct: 1   MVQEESIRKGPWTEQEDFQLVCFVGLFGDRRWDFIAKVSGLKRNGKSCRLRWVNYLHPGL 60

Query: 61  KRGKMSPQEERLVLDLHSKWGNRWSKIARKLPGRTDNEIKNFWRTHVRKLAQEKKKAAVH 120
           KRGKMSPQEERLVLDLHSKWGNRWSKIARKLPGRTDNEIKNFWRTHVRKLAQEKKKAAVH
Sbjct: 61  KRGKMSPQEERLVLDLHSKWGNRWSKIARKLPGRTDNEIKNFWRTHVRKLAQEKKKAAVH 120

Query: 121 HVVVSPSSSSTVDSVPTIDIGEESFYDTGGDWSCYMGDEDEKGYSYSMDDIWRDIDDQSV 180
           HVVVSPSSSSTVDSVPTIDIGEESFYDTGGDWSCYMG+EDEKGYSYSMDDIWRDIDDQSV
Sbjct: 121 HVVVSPSSSSTVDSVPTIDIGEESFYDTGGDWSCYMGEEDEKGYSYSMDDIWRDIDDQSV 180

Query: 181 VKEVCDEKLSCGPVASPAPW---EYSPPWKVAEEKFGI 216
           VK VCDEKLSCGPVASPAPW   EYSPPWKVAEE F I
Sbjct: 181 VKAVCDEKLSCGPVASPAPWEYGEYSPPWKVAEENFRI 218

[Close]

BLAST of Carg12342 vs. ExPASy TrEMBL
Match: A0A6J1KB14 (transcription factor MYB48-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111493304 PE=4 SV=1)

HSP 1 Score: 360.9 bits (925), Expect = 3.6e-96
Identity = 172/182 (94.51%), Postives = 175/182 (96.15%), Query Frame = 0


Query: 37  KVSGLKRNGKSCRLRWVNYLHPGLKRGKMSPQEERLVLDLHSKWGNRWSKIARKLPGRTD 96
           ++ GLKRNGKSCRLRWVNYLHPGLKRGKMSPQEERLVLDLHSKWGNRWSKIARKLPGRTD
Sbjct: 37  QIIGLKRNGKSCRLRWVNYLHPGLKRGKMSPQEERLVLDLHSKWGNRWSKIARKLPGRTD 96

Query: 97  NEIKNFWRTHVRKLAQEKKKAAVHHVVVSPSSSSTVDSVPTIDIGEESFYDTGGDWSCYM 156
           NEIKNFWRTHVRKLAQEKKKAAVHHVVVSPSSSSTVDSVPTIDIGEESFYDTGGDWSCYM
Sbjct: 97  NEIKNFWRTHVRKLAQEKKKAAVHHVVVSPSSSSTVDSVPTIDIGEESFYDTGGDWSCYM 156

Query: 157 GDEDEKGYSYSMDDIWRDIDDQSVVKEVCDEKLSCGPVASPAPW---EYSPPWKVAEEKF 216
           G+EDEKGYSYSMDDIWRDIDDQSVVK VCDEKLSCGPVASPAPW   EYSPPWKVAEE F
Sbjct: 157 GEEDEKGYSYSMDDIWRDIDDQSVVKAVCDEKLSCGPVASPAPWEYGEYSPPWKVAEENF 216

[Close]

BLAST of Carg12342 vs. ExPASy TrEMBL
Match: A0A1S3C5C2 (transcription factor MYB59-like OS=Cucumis melo OX=3656 GN=LOC103497204 PE=4 SV=1)

HSP 1 Score: 331.3 bits (848), Expect = 3.1e-87
Identity = 168/221 (76.02%), Postives = 187/221 (84.62%), Query Frame = 0


Query: 1   MVQEESVRKGPWTEQEDFQLVCFVGLFGDRRWDFIAKVSGLKRNGKSCRLRWVNYLHPGL 60
           +VQEES+RKGPWTEQEDFQLVCFVGLFGDRRWDFIAKVSGLKR GKSCRLRWVNYLHPGL
Sbjct: 2   VVQEESIRKGPWTEQEDFQLVCFVGLFGDRRWDFIAKVSGLKRTGKSCRLRWVNYLHPGL 61

Query: 61  KRGKMSPQEERLVLDLHSKWGNRWSKIARKLPGRTDNEIKNFWRTHVRKLAQEKKKAAVH 120
           KRGKM+P EERLVL+LHSKWGNRWS+IARKLPGRTDNEIKNFWRTH+RK+AQEKKK    
Sbjct: 62  KRGKMTPHEERLVLELHSKWGNRWSRIARKLPGRTDNEIKNFWRTHMRKVAQEKKKKK-D 121

Query: 121 HVVVSPSSSSTVDSVP-TIDIGEESFYDTGGDWSCYMGDEDEKGYSYSMDDIWRDIDDQS 180
            VVVSPS+SST+DS P TI+IGEESFYDTG + S     E++KGY Y+MDDIWRDI+DQS
Sbjct: 122 IVVVSPSTSSTIDSAPTTIEIGEESFYDTGANPS-----EEQKGYCYTMDDIWRDIEDQS 181

Query: 181 --VVKEVCDEK-----LSCGPVASPAPWEYS--PPWKVAEE 212
             VVK +CD++     +SCGPV SP  WEY    PWK  EE
Sbjct: 182 TNVVKPLCDDQFHGNFVSCGPVVSPL-WEYGQYSPWKTIEE 215

[Close]

BLAST of Carg12342 vs. ExPASy TrEMBL
Match: A0A5A7SVB3 (Transcription factor MYB59-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold49G00800 PE=4 SV=1)

HSP 1 Score: 318.9 bits (816), Expect = 1.6e-83
Identity = 162/213 (76.06%), Postives = 179/213 (84.04%), Query Frame = 0


Query: 9   KGPWTEQEDFQLVCFVGLFGDRRWDFIAKVSGLKRNGKSCRLRWVNYLHPGLKRGKMSPQ 68
           KGPWTEQEDFQLVCFVGLFGDRRWDFIAKVSGLKR GKSCRLRWVNYLHPGLKRGKM+P 
Sbjct: 3   KGPWTEQEDFQLVCFVGLFGDRRWDFIAKVSGLKRTGKSCRLRWVNYLHPGLKRGKMTPH 62

Query: 69  EERLVLDLHSKWGNRWSKIARKLPGRTDNEIKNFWRTHVRKLAQEKKKAAVHHVVVSPSS 128
           EERLVL+LHSKWGNRWS+IARKLPGRTDNEIKNFWRTH+RK+AQEKKK     VVVSPS+
Sbjct: 63  EERLVLELHSKWGNRWSRIARKLPGRTDNEIKNFWRTHMRKVAQEKKKKK-DIVVVSPST 122

Query: 129 SSTVDSVP-TIDIGEESFYDTGGDWSCYMGDEDEKGYSYSMDDIWRDIDDQS--VVKEVC 188
           SST+DS P TI+IGEESFYDTG + S     E++KGY Y+MDDIWRDI+DQS  VVK +C
Sbjct: 123 SSTIDSAPTTIEIGEESFYDTGANPS-----EEQKGYCYTMDDIWRDIEDQSTNVVKPLC 182

Query: 189 DEK-----LSCGPVASPAPWEYS--PPWKVAEE 212
           D++     +SCGPV SP  WEY    PWK  EE
Sbjct: 183 DDQFHGNFVSCGPVVSPL-WEYGQYSPWKTIEE 208

[Close]

BLAST of Carg12342 vs. TAIR 10
Match: AT3G46130.1 (myb domain protein 48 )

HSP 1 Score: 250.8 bits (639), Expect = 1.0e-66
Identity = 140/222 (63.06%), Postives = 158/222 (71.17%), Query Frame = 0


Query: 1   MVQEESVRKGPWTEQEDFQLVCFVGLFGDRRWDFIAKVSGLKRNGKSCRLRWVNYLHPGL 60
           M+QEE  RKGPWTEQED  LV FV LFGDRRWDFIAKVSGL R GKSCRLRWVNYLHPGL
Sbjct: 1   MMQEEGNRKGPWTEQEDILLVNFVHLFGDRRWDFIAKVSGLNRTGKSCRLRWVNYLHPGL 60

Query: 61  KRGKMSPQEERLVLDLHSKWGNRWSKIARKLPGRTDNEIKNFWRTHVRKLAQEKKKAAVH 120
           KRGKM+PQEERLVL+LH+KWGNRWSKIARKLPGRTDNEIKN+WRTH+RK AQEKK+    
Sbjct: 61  KRGKMTPQEERLVLELHAKWGNRWSKIARKLPGRTDNEIKNYWRTHMRKKAQEKKRPVSP 120

Query: 121 HVVVSPSSSSTVDSVPT----------IDIGEESFYDTGGDWSC-YMGDEDEKGYSYSMD 180
               S  SSS+V +  T             GE SFYDTGG  S   M  E+E    YS+D
Sbjct: 121 TSSFSNCSSSSVTTTTTNTQDTSCHSRKSSGEVSFYDTGGSRSTREMNQENED--VYSLD 180

Query: 181 DIWRDIDDQSV-----VKEVCDEK---LSCGPVASPAPWEYS 204
           DIWR+ID  +V     VK++  E+   LS   +ASP+ WE S
Sbjct: 181 DIWREIDHSAVNIIKPVKDIYSEQSHCLSYPNLASPS-WESS 219

[Close]

BLAST of Carg12342 vs. TAIR 10
Match: AT5G59780.3 (myb domain protein 59 )

HSP 1 Score: 242.3 bits (617), Expect = 3.6e-64
Identity = 135/212 (63.68%), Postives = 156/212 (73.58%), Query Frame = 0


Query: 1   MVQEESVRKGPWTEQEDFQLVCFVGLFGDRRWDFIAKVSGLKRNGKSCRLRWVNYLHPGL 60
           +VQEE  RKGPWTEQED  LV FV LFGDRRWDF+AKVSGL R GKSCRLRWVNYLHPGL
Sbjct: 3   LVQEE-YRKGPWTEQEDILLVNFVHLFGDRRWDFVAKVSGLNRTGKSCRLRWVNYLHPGL 62

Query: 61  KRGKMSPQEERLVLDLHSKWGNRWSKIARKLPGRTDNEIKNFWRTHVRKLAQEKKKAAVH 120
           KRGKM+PQEERLVL+LH+KWGNRWSKIARKLPGRTDNEIKN+WRTH+RK AQEKK+    
Sbjct: 63  KRGKMTPQEERLVLELHAKWGNRWSKIARKLPGRTDNEIKNYWRTHMRKKAQEKKRP--- 122

Query: 121 HVVVSPSSSSTVDSVPTIDIGEESFYDTGGDWSCYMGDEDEKGYSYSMDDIWRDIDDQ-- 180
              +SP+SSS+  +  +  +   +  DTGG  +  M  E E GY YSMDDIWR+ID    
Sbjct: 123 ---MSPTSSSS--NCCSSSMTTTTSQDTGGS-NGKMNQECEDGY-YSMDDIWREIDQSGA 182

Query: 181 SVVKEVCDE-------KLSCGPVASPAPWEYS 204
           +V+K V D         L+  P+ASP  WE S
Sbjct: 183 NVIKPVKDNYYSEQSCYLNFPPLASPT-WESS 202

[Close]

BLAST of Carg12342 vs. TAIR 10
Match: AT3G46130.3 (myb domain protein 48 )

HSP 1 Score: 187.2 bits (474), Expect = 1.4e-47
Identity = 109/184 (59.24%), Postives = 126/184 (68.48%), Query Frame = 0


Query: 39  SGLKRNGKSCRLRWVNYLHPGLKRGKMSPQEERLVLDLHSKWGNRWSKIARKLPGRTDNE 98
           SGL R GKSCRLRWVNYLHPGLKRGKM+PQEERLVL+LH+KWGNRWSKIARKLPGRTDNE
Sbjct: 9   SGLNRTGKSCRLRWVNYLHPGLKRGKMTPQEERLVLELHAKWGNRWSKIARKLPGRTDNE 68

Query: 99  IKNFWRTHVRKLAQEKKKAAVHHVVVSPSSSSTVDSVPT----------IDIGEESFYDT 158
           IKN+WRTH+RK AQEKK+        S  SSS+V +  T             GE SFYDT
Sbjct: 69  IKNYWRTHMRKKAQEKKRPVSPTSSFSNCSSSSVTTTTTNTQDTSCHSRKSSGEVSFYDT 128

Query: 159 GGDWSC-YMGDEDEKGYSYSMDDIWRDIDDQSV-----VKEVCDEK---LSCGPVASPAP 204
           GG  S   M  E+E    YS+DDIWR+ID  +V     VK++  E+   LS   +ASP+ 
Sbjct: 129 GGSRSTREMNQENED--VYSLDDIWREIDHSAVNIIKPVKDIYSEQSHCLSYPNLASPS- 188

[Close]

BLAST of Carg12342 vs. TAIR 10
Match: AT3G46130.4 (myb domain protein 48 )

HSP 1 Score: 185.3 bits (469), Expect = 5.3e-47
Identity = 108/183 (59.02%), Postives = 125/183 (68.31%), Query Frame = 0


Query: 40  GLKRNGKSCRLRWVNYLHPGLKRGKMSPQEERLVLDLHSKWGNRWSKIARKLPGRTDNEI 99
           GL R GKSCRLRWVNYLHPGLKRGKM+PQEERLVL+LH+KWGNRWSKIARKLPGRTDNEI
Sbjct: 20  GLNRTGKSCRLRWVNYLHPGLKRGKMTPQEERLVLELHAKWGNRWSKIARKLPGRTDNEI 79

Query: 100 KNFWRTHVRKLAQEKKKAAVHHVVVSPSSSSTVDSVPT----------IDIGEESFYDTG 159
           KN+WRTH+RK AQEKK+        S  SSS+V +  T             GE SFYDTG
Sbjct: 80  KNYWRTHMRKKAQEKKRPVSPTSSFSNCSSSSVTTTTTNTQDTSCHSRKSSGEVSFYDTG 139

Query: 160 GDWSC-YMGDEDEKGYSYSMDDIWRDIDDQSV-----VKEVCDEK---LSCGPVASPAPW 204
           G  S   M  E+E    YS+DDIWR+ID  +V     VK++  E+   LS   +ASP+ W
Sbjct: 140 GSRSTREMNQENED--VYSLDDIWREIDHSAVNIIKPVKDIYSEQSHCLSYPNLASPS-W 199

[Close]

BLAST of Carg12342 vs. TAIR 10
Match: AT5G59780.2 (myb domain protein 59 )

HSP 1 Score: 181.0 bits (458), Expect = 1.0e-45
Identity = 104/173 (60.12%), Postives = 123/173 (71.10%), Query Frame = 0


Query: 40  GLKRNGKSCRLRWVNYLHPGLKRGKMSPQEERLVLDLHSKWGNRWSKIARKLPGRTDNEI 99
           GL R GKSCRLRWVNYLHPGLKRGKM+PQEERLVL+LH+KWGNRWSKIARKLPGRTDNEI
Sbjct: 20  GLNRTGKSCRLRWVNYLHPGLKRGKMTPQEERLVLELHAKWGNRWSKIARKLPGRTDNEI 79

Query: 100 KNFWRTHVRKLAQEKKKAAVHHVVVSPSSSSTVDSVPTIDIGEESFYDTGGDWSCYMGDE 159
           KN+WRTH+RK AQEKK+       +SP+SSS+  +  +  +   +  DTGG  +  M  E
Sbjct: 80  KNYWRTHMRKKAQEKKRP------MSPTSSSS--NCCSSSMTTTTSQDTGGS-NGKMNQE 139

Query: 160 DEKGYSYSMDDIWRDIDDQ--SVVKEVCDE-------KLSCGPVASPAPWEYS 204
            E GY YSMDDIWR+ID    +V+K V D         L+  P+ASP  WE S
Sbjct: 140 CEDGY-YSMDDIWREIDQSGANVIKPVKDNYYSEQSCYLNFPPLASPT-WESS 181

The following BLAST results are available for this feature:

BLAST of Carg12342 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6607214.1	5.9e-125	100.00	Transcription factor MYB48, partial [Cucurbita argyrosperma subsp. sororia] >KAG...	[more]
XP_022949511.1	4.7e-122	97.25	transcription factor MYB48-like [Cucurbita moschata]	[more]
XP_023523177.1	8.0e-122	97.25	transcription factor MYB48-like [Cucurbita pepo subsp. pepo]	[more]
XP_022998725.1	1.5e-120	96.33	transcription factor MYB48-like isoform X1 [Cucurbita maxima]	[more]
XP_022998726.1	7.5e-96	94.51	transcription factor MYB48-like isoform X2 [Cucurbita maxima]	[more]

BLAST of Carg12342 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LX82	1.4e-65	63.06	Transcription factor MYB48 OS=Arabidopsis thaliana OX=3702 GN=MYB48 PE=2 SV=1	[more]
Q4JL84	5.1e-63	63.68	Transcription factor MYB59 OS=Arabidopsis thaliana OX=3702 GN=MYB59 PE=2 SV=2	[more]
Q4JL76	5.5e-57	53.46	Myb-related protein MYBAS2 OS=Oryza sativa subsp. japonica OX=39947 GN=MYBAS2 PE...	[more]
Q53NK6	6.1e-56	50.22	Myb-related protein MYBAS1 OS=Oryza sativa subsp. japonica OX=39947 GN=MYBAS1 PE...	[more]
Q9SCP1	1.1e-41	68.22	Transcription factor MYB27 OS=Arabidopsis thaliana OX=3702 GN=MYB27 PE=2 SV=1	[more]

BLAST of Carg12342 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GC76	2.3e-122	97.25	transcription factor MYB48-like OS=Cucurbita moschata OX=3662 GN=LOC111452839 PE...	[more]
A0A6J1KDA1	7.3e-121	96.33	transcription factor MYB48-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A6J1KB14	3.6e-96	94.51	transcription factor MYB48-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A1S3C5C2	3.1e-87	76.02	transcription factor MYB59-like OS=Cucumis melo OX=3656 GN=LOC103497204 PE=4 SV=...	[more]
A0A5A7SVB3	1.6e-83	76.06	Transcription factor MYB59-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]

BLAST of Carg12342 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G46130.1	1.0e-66	63.06	myb domain protein 48	[more]
AT5G59780.3	3.6e-64	63.68	myb domain protein 59	[more]
AT3G46130.3	1.4e-47	59.24	myb domain protein 48	[more]
AT3G46130.4	5.3e-47	59.02	myb domain protein 48	[more]
AT5G59780.2	1.0e-45	60.12	myb domain protein 59	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 8..58 e-value: 1.2E-13 score: 61.4 coord: 61..109 e-value: 1.7E-16 score: 70.8
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 4..56 score: 10.568692
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 57..107 score: 9.662925
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 64..107 e-value: 4.07563E-11 score: 54.1186
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 11..56 e-value: 2.40768E-9 score: 49.4962
None	No IPR available	GENE3D	1.10.10.60		coord: 66..108 e-value: 6.0E-19 score: 69.7
None	No IPR available	GENE3D	1.10.10.60		coord: 9..61 e-value: 9.0E-15 score: 56.4
None	No IPR available	PANTHER	PTHR45675:SF7	TRANSCRIPTION FACTOR MYB48-RELATED	coord: 3..212
IPR017930	Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 62..106 e-value: 1.1E-14 score: 54.3 coord: 9..56 e-value: 3.6E-13 score: 49.5
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 4..56 score: 18.238949
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 57..111 score: 25.380171
IPR044676	MYB-like transcription factor EOBI/EOBII-like, plant	PANTHER	PTHR45675	MYB TRANSCRIPTION FACTOR-RELATED-RELATED	coord: 3..212
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 7..103

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg12342-RA	Carg12342-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0043565	sequence-specific DNA binding