Carg12339 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg12339
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	zinc finger protein ZAT12-like isoform X1
Location	Carg_Chr01: 3024894 .. 3025301 (-)
RNA-Seq Expression	Carg12339
Synteny	Carg12339

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTAGATTGCTTAATGTTGCTATCCAAAATGGAGGAGCCACGGCGGAAGAACGGTTTCGCTCCGACGCCGGCGGCGGATTCCGACAAGATTTTTGTCTGTAAAACGTGTAATAGAGAATTCTCATCTTTCCAGGCTTTAGGAGGGCATAGAACCAGCCACACGAAGCCCAATTTCAACGCTAACGGCCCACCAACTAAGTCCAAGGCCCATGAATGCCCAATTTGTGGGCTTGATTTTCCGATCGGACAAGCGTTAGGCGGTCACATGAGGCGCCACCGGAACACCGCCGCCGCCGCCGCCGTATTGAAGAAGTCCGATGGCTGTGGGAAAAGGGTTTTTGAGTTGGATTTGAACTTGCCGCCATTAGAGAACAATTTGAATTTGAAGTTGCAACTGAGTTTATAG

mRNA sequence

ATGGTAGATTGCTTAATGTTGCTATCCAAAATGGAGGAGCCACGGCGGAAGAACGGTTTCGCTCCGACGCCGGCGGCGGATTCCGACAAGATTTTTGTCTGTAAAACGTGTAATAGAGAATTCTCATCTTTCCAGGCTTTAGGAGGGCATAGAACCAGCCACACGAAGCCCAATTTCAACGCTAACGGCCCACCAACTAAGTCCAAGGCCCATGAATGCCCAATTTGTGGGCTTGATTTTCCGATCGGACAAGCGTTAGGCGGTCACATGAGGCGCCACCGGAACACCGCCGCCGCCGCCGCCGTATTGAAGAAGTCCGATGGCTGTGGGAAAAGGGTTTTTGAGTTGGATTTGAACTTGCCGCCATTAGAGAACAATTTGAATTTGAAGTTGCAACTGAGTTTATAG

Coding sequence (CDS)

ATGGTAGATTGCTTAATGTTGCTATCCAAAATGGAGGAGCCACGGCGGAAGAACGGTTTCGCTCCGACGCCGGCGGCGGATTCCGACAAGATTTTTGTCTGTAAAACGTGTAATAGAGAATTCTCATCTTTCCAGGCTTTAGGAGGGCATAGAACCAGCCACACGAAGCCCAATTTCAACGCTAACGGCCCACCAACTAAGTCCAAGGCCCATGAATGCCCAATTTGTGGGCTTGATTTTCCGATCGGACAAGCGTTAGGCGGTCACATGAGGCGCCACCGGAACACCGCCGCCGCCGCCGCCGTATTGAAGAAGTCCGATGGCTGTGGGAAAAGGGTTTTTGAGTTGGATTTGAACTTGCCGCCATTAGAGAACAATTTGAATTTGAAGTTGCAACTGAGTTTATAG

Protein sequence

MVDCLMLLSKMEEPRRKNGFAPTPAADSDKIFVCKTCNREFSSFQALGGHRTSHTKPNFNANGPPTKSKAHECPICGLDFPIGQALGGHMRRHRNTAAAAAVLKKSDGCGKRVFELDLNLPPLENNLNLKLQLSL

Homology

[Close]

BLAST of Carg12339 vs. NCBI nr
Match: KAG7036896.1 (Zinc finger protein ZAT12, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 284.3 bits (726), Expect = 5.6e-73
Identity = 135/135 (100.00%), Postives = 135/135 (100.00%), Query Frame = 0


Query: 1   MVDCLMLLSKMEEPRRKNGFAPTPAADSDKIFVCKTCNREFSSFQALGGHRTSHTKPNFN 60
           MVDCLMLLSKMEEPRRKNGFAPTPAADSDKIFVCKTCNREFSSFQALGGHRTSHTKPNFN
Sbjct: 1   MVDCLMLLSKMEEPRRKNGFAPTPAADSDKIFVCKTCNREFSSFQALGGHRTSHTKPNFN 60

Query: 61  ANGPPTKSKAHECPICGLDFPIGQALGGHMRRHRNTAAAAAVLKKSDGCGKRVFELDLNL 120
           ANGPPTKSKAHECPICGLDFPIGQALGGHMRRHRNTAAAAAVLKKSDGCGKRVFELDLNL
Sbjct: 61  ANGPPTKSKAHECPICGLDFPIGQALGGHMRRHRNTAAAAAVLKKSDGCGKRVFELDLNL 120

Query: 121 PPLENNLNLKLQLSL 136
           PPLENNLNLKLQLSL
Sbjct: 121 PPLENNLNLKLQLSL 135

[Close]

BLAST of Carg12339 vs. NCBI nr
Match: XP_023524575.1 (zinc finger protein ZAT12-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 279.3 bits (713), Expect = 1.8e-71
Identity = 131/133 (98.50%), Postives = 133/133 (100.00%), Query Frame = 0


Query: 3   DCLMLLSKMEEPRRKNGFAPTPAADSDKIFVCKTCNREFSSFQALGGHRTSHTKPNFNAN 62
           DCLMLLSKMEEPRRKNGF+PTPAADSDKIFVCKTCNREFSSFQALGGHRTSHTKPNFNAN
Sbjct: 33  DCLMLLSKMEEPRRKNGFSPTPAADSDKIFVCKTCNREFSSFQALGGHRTSHTKPNFNAN 92

Query: 63  GPPTKSKAHECPICGLDFPIGQALGGHMRRHRNTAAAAAVLKKSDGCGKRVFELDLNLPP 122
           GPPTKSKAHECPICGLDFPIGQALGGHMRRHRNTAAAAAVLKKSDGCGKR+FELDLNLPP
Sbjct: 93  GPPTKSKAHECPICGLDFPIGQALGGHMRRHRNTAAAAAVLKKSDGCGKRIFELDLNLPP 152

Query: 123 LENNLNLKLQLSL 136
           LENNLNLKLQLSL
Sbjct: 153 LENNLNLKLQLSL 165

[Close]

BLAST of Carg12339 vs. NCBI nr
Match: XP_022949001.1 (zinc finger protein ZAT12-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 278.1 bits (710), Expect = 4.0e-71
Identity = 134/135 (99.26%), Postives = 134/135 (99.26%), Query Frame = 0


Query: 1   MVDCLMLLSKMEEPRRKNGFAPTPAADSDKIFVCKTCNREFSSFQALGGHRTSHTKPNFN 60
           MVDCLMLLSKMEEPRRKNGFAPTPAADSDKIFVCKTCNREFSSFQALGGHRTSHTKPNFN
Sbjct: 15  MVDCLMLLSKMEEPRRKNGFAPTPAADSDKIFVCKTCNREFSSFQALGGHRTSHTKPNFN 74

Query: 61  ANGPPTKSKAHECPICGLDFPIGQALGGHMRRHRNTAAAAAVLKKSDGCGKRVFELDLNL 120
           ANGPPTKSKAHECPICGLDFPIGQALGGHMRRHRNT AAAAVLKKSDGCGKRVFELDLNL
Sbjct: 75  ANGPPTKSKAHECPICGLDFPIGQALGGHMRRHRNT-AAAAVLKKSDGCGKRVFELDLNL 134

Query: 121 PPLENNLNLKLQLSL 136
           PPLENNLNLKLQLSL
Sbjct: 135 PPLENNLNLKLQLSL 148

[Close]

BLAST of Carg12339 vs. NCBI nr
Match: XP_022997819.1 (zinc finger protein ZAT12-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 275.8 bits (704), Expect = 2.0e-70
Identity = 132/135 (97.78%), Postives = 134/135 (99.26%), Query Frame = 0


Query: 1   MVDCLMLLSKMEEPRRKNGFAPTPAADSDKIFVCKTCNREFSSFQALGGHRTSHTKPNFN 60
           MVDCLMLLSKMEEPRRKNGFAPTPAADSDK+FVCKTCNREFSSFQALGGHRTSHTKPNFN
Sbjct: 15  MVDCLMLLSKMEEPRRKNGFAPTPAADSDKVFVCKTCNREFSSFQALGGHRTSHTKPNFN 74

Query: 61  ANGPPTKSKAHECPICGLDFPIGQALGGHMRRHRNTAAAAAVLKKSDGCGKRVFELDLNL 120
           ANGPPTKSKAHECPICGLDFPIGQALGGHMRRHR+T AAAAVLKKSDGCGKRVFELDLNL
Sbjct: 75  ANGPPTKSKAHECPICGLDFPIGQALGGHMRRHRDT-AAAAVLKKSDGCGKRVFELDLNL 134

Query: 121 PPLENNLNLKLQLSL 136
           PPLENNLNLKLQLSL
Sbjct: 135 PPLENNLNLKLQLSL 148

[Close]

BLAST of Carg12339 vs. NCBI nr
Match: KAG6607211.1 (Zinc finger protein ZAT12, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 258.8 bits (660), Expect = 2.5e-65
Identity = 124/125 (99.20%), Postives = 124/125 (99.20%), Query Frame = 0


Query: 11  MEEPRRKNGFAPTPAADSDKIFVCKTCNREFSSFQALGGHRTSHTKPNFNANGPPTKSKA 70
           MEEPRRKNGFAPTPAADSDKIFVCKTCNREFSSFQALGGHRTSHTKPNFNANGPPTKSKA
Sbjct: 1   MEEPRRKNGFAPTPAADSDKIFVCKTCNREFSSFQALGGHRTSHTKPNFNANGPPTKSKA 60

Query: 71  HECPICGLDFPIGQALGGHMRRHRNTAAAAAVLKKSDGCGKRVFELDLNLPPLENNLNLK 130
           HECPICGLDFPIGQALGGHMRRHRNT AAAAVLKKSDGCGKRVFELDLNLPPLENNLNLK
Sbjct: 61  HECPICGLDFPIGQALGGHMRRHRNT-AAAAVLKKSDGCGKRVFELDLNLPPLENNLNLK 120

Query: 131 LQLSL 136
           LQLSL
Sbjct: 121 LQLSL 124

[Close]

BLAST of Carg12339 vs. ExPASy Swiss-Prot
Match: Q42410 (Zinc finger protein ZAT12 OS=Arabidopsis thaliana OX=3702 GN=ZAT12 PE=2 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 1.7e-27
Identity = 72/150 (48.00%), Postives = 91/150 (60.67%), Query Frame = 0


Query: 3   DCLMLLSKMEEPRRKNGFAPTPAADSDKIFVCKTCNREFSSFQALGGHRTSHTKPNFNAN 62
           +CLMLLS++ +     G       D  ++F CKTC ++F SFQALGGHR SH KPN +A 
Sbjct: 17  NCLMLLSRVGQENVDGG-------DQKRVFTCKTCLKQFHSFQALGGHRASHKKPNNDAL 76

Query: 63  G----PPTKSKAHECPICGLDFPIGQALGGHMRRHRNTAAAA---------------AVL 122
                   K+ +H CPICG++FP+GQALGGHMRRHRN + AA                 L
Sbjct: 77  SSGLMKKVKTSSHPCPICGVEFPMGQALGGHMRRHRNESGAAGGALVTRALLPEPTVTTL 136

Query: 123 KKSDGCGKRVFELDLNLPPLENNLNLKLQL 134
           KKS   GKRV  LDL+L  + +NLNLKL+L
Sbjct: 137 KKSSS-GKRVACLDLSL-GMVDNLNLKLEL 157

[Close]

BLAST of Carg12339 vs. ExPASy Swiss-Prot
Match: Q42453 (Zinc finger protein ZAT7 OS=Arabidopsis thaliana OX=3702 GN=ZAT7 PE=2 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 2.5e-23
Identity = 65/150 (43.33%), Postives = 87/150 (58.00%), Query Frame = 0


Query: 4   CLMLLSKMEEPRRKNGFAPTPAADSDKIFVCKTCNREFSSFQALGGHRTSHTK------P 63
           CLMLLS++       G         +++F CKTC +EFSSFQALGGHR SH K      P
Sbjct: 19  CLMLLSRV-------GECGGGCGGDERVFRCKTCLKEFSSFQALGGHRASHKKLINSDNP 78

Query: 64  NFNANGPPTKSK-AHECPICGLDFPIGQALGGHMRRHRNTAAAAAVLKKS---------- 123
           +   +    K+K +H CPICG+ FP+GQALGGHMRRHRN   + +++ +S          
Sbjct: 79  SLLGSLSNKKTKTSHPCPICGVKFPMGQALGGHMRRHRNEKVSGSLVTRSFLPETTTVTA 138

Query: 124 ---DGCGKRVFELDLNLPPLENNLNLKLQL 134
                 GKRV  LDL+L  +E+ +N KL+L
Sbjct: 139 LKKFSSGKRVACLDLDLDSMESLVNWKLEL 161

[Close]

BLAST of Carg12339 vs. ExPASy Swiss-Prot
Match: Q9SLD4 (Zinc finger protein ZAT11 OS=Arabidopsis thaliana OX=3702 GN=ZAT11 PE=2 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 1.4e-21
Identity = 61/143 (42.66%), Postives = 78/143 (54.55%), Query Frame = 0


Query: 4   CLMLLSKMEEPRRKNGFAPTPAADSDKIFVCKTCNREFSSFQALGGHRTSHTKPNFNANG 63
           CLM+L++    ++      T +  S++ F CKTCN+ FSSFQALGGHR SH KP      
Sbjct: 20  CLMILAQTSMVKQIGLNQHTESHTSNQ-FECKTCNKRFSSFQALGGHRASHKKPKLTVEQ 79

Query: 64  PPTK--------SKAHECPICGLDFPIGQALGGHMRRHRNTAA-----------AAAVLK 123
              K        +  H+C IC   F  GQALGGHMRRHR++             +  VLK
Sbjct: 80  KDVKHLSNDYKGNHFHKCSICSQSFGTGQALGGHMRRHRSSMTVEPSFISPMIPSMPVLK 139

Query: 124 KSDGCGKRVFELDLNLPPLENNL 128
           +  G  KR+  LDLNL PLEN+L
Sbjct: 140 RC-GSSKRILSLDLNLTPLENDL 160

[Close]

BLAST of Carg12339 vs. ExPASy Swiss-Prot
Match: Q9LX85 (Zinc finger protein ZAT8 OS=Arabidopsis thaliana OX=3702 GN=ZAT8 PE=2 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 3.0e-21
Identity = 65/153 (42.48%), Postives = 84/153 (54.90%), Query Frame = 0


Query: 4   CLMLLSKMEEPRRKNGFAPTPAADSDKIFVCKTCNREFSSFQALGGHRTSHTK------P 63
           CLMLLS++ E                ++F CKTC +EFSSFQALGGHR SH K      P
Sbjct: 18  CLMLLSRVGE---------CGGGGEKRVFRCKTCLKEFSSFQALGGHRASHKKLINSSDP 77

Query: 64  NFNANGPPTKSK---AHECPICGLDFPIGQALGGHMRRHRNTAAAAAVL----------- 123
           +   +    K+K   +H CPICG++FP+GQALGGHMRRHR+  A+   L           
Sbjct: 78  SLLGSLSNKKTKTATSHPCPICGVEFPMGQALGGHMRRHRSEKASPGTLVTRSFLPETTT 137

Query: 124 ---KKSDGCGKRVFELDLNLPPLENNLNLKLQL 134
               K    GKRV  LDL+   +E+ +N KL+L
Sbjct: 138 VTTLKKSSSGKRVACLDLD--SMESLVNWKLEL 159

[Close]

BLAST of Carg12339 vs. ExPASy Swiss-Prot
Match: Q9LFG0 (Zinc finger protein ZAT18 OS=Arabidopsis thaliana OX=3702 GN=ZAT18 PE=2 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 1.1e-18
Identity = 58/143 (40.56%), Postives = 77/143 (53.85%), Query Frame = 0


Query: 1   MVDCLMLLSKMEEPRRKNGFAPTPA-ADSDKIFVCKTCNREFSSFQALGGHRTSHTKPNF 60
           +V+ LM+LS+    ++ +    T +  + +  F CKTCNR+F SFQALGGHR SH KP  
Sbjct: 17  IVESLMMLSRSFVVKQIDVKQSTGSKTNHNNHFECKTCNRKFDSFQALGGHRASHKKPKL 76

Query: 61  NANGPPTKSK-----AHECPICGLDFPIGQALGGHMRRHRNTAAAAAVLKKSDGCGKRVF 120
             +    K +      H+C IC   F  GQALGGHMR+HR +      +  S    + VF
Sbjct: 77  IVDQEQVKHRNKENDMHKCTICDQMFGTGQALGGHMRKHRTSMITEQSIVPSVVYSRPVF 136

Query: 121 E--------LDLNLPPLENNLNL 130
                    LDLNL PLEN+L L
Sbjct: 137 NRCSSSKEILDLNLTPLENDLVL 159

[Close]

BLAST of Carg12339 vs. ExPASy TrEMBL
Match: A0A6J1GAS1 (zinc finger protein ZAT12-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111452472 PE=4 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 2.0e-71
Identity = 134/135 (99.26%), Postives = 134/135 (99.26%), Query Frame = 0


Query: 1   MVDCLMLLSKMEEPRRKNGFAPTPAADSDKIFVCKTCNREFSSFQALGGHRTSHTKPNFN 60
           MVDCLMLLSKMEEPRRKNGFAPTPAADSDKIFVCKTCNREFSSFQALGGHRTSHTKPNFN
Sbjct: 15  MVDCLMLLSKMEEPRRKNGFAPTPAADSDKIFVCKTCNREFSSFQALGGHRTSHTKPNFN 74

Query: 61  ANGPPTKSKAHECPICGLDFPIGQALGGHMRRHRNTAAAAAVLKKSDGCGKRVFELDLNL 120
           ANGPPTKSKAHECPICGLDFPIGQALGGHMRRHRNT AAAAVLKKSDGCGKRVFELDLNL
Sbjct: 75  ANGPPTKSKAHECPICGLDFPIGQALGGHMRRHRNT-AAAAVLKKSDGCGKRVFELDLNL 134

Query: 121 PPLENNLNLKLQLSL 136
           PPLENNLNLKLQLSL
Sbjct: 135 PPLENNLNLKLQLSL 148

[Close]

BLAST of Carg12339 vs. ExPASy TrEMBL
Match: A0A6J1KCM4 (zinc finger protein ZAT12-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111492663 PE=4 SV=1)

HSP 1 Score: 275.8 bits (704), Expect = 9.7e-71
Identity = 132/135 (97.78%), Postives = 134/135 (99.26%), Query Frame = 0


Query: 1   MVDCLMLLSKMEEPRRKNGFAPTPAADSDKIFVCKTCNREFSSFQALGGHRTSHTKPNFN 60
           MVDCLMLLSKMEEPRRKNGFAPTPAADSDK+FVCKTCNREFSSFQALGGHRTSHTKPNFN
Sbjct: 15  MVDCLMLLSKMEEPRRKNGFAPTPAADSDKVFVCKTCNREFSSFQALGGHRTSHTKPNFN 74

Query: 61  ANGPPTKSKAHECPICGLDFPIGQALGGHMRRHRNTAAAAAVLKKSDGCGKRVFELDLNL 120
           ANGPPTKSKAHECPICGLDFPIGQALGGHMRRHR+T AAAAVLKKSDGCGKRVFELDLNL
Sbjct: 75  ANGPPTKSKAHECPICGLDFPIGQALGGHMRRHRDT-AAAAVLKKSDGCGKRVFELDLNL 134

Query: 121 PPLENNLNLKLQLSL 136
           PPLENNLNLKLQLSL
Sbjct: 135 PPLENNLNLKLQLSL 148

[Close]

BLAST of Carg12339 vs. ExPASy TrEMBL
Match: A0A1S3C722 (zinc finger protein ZAT12-like OS=Cucumis melo OX=3656 GN=LOC103497207 PE=4 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 6.3e-46
Identity = 100/133 (75.19%), Postives = 109/133 (81.95%), Query Frame = 0


Query: 1   MVDCLMLLSKMEEPRRKNGFAPTPAADSDKIFVCKTCNREFSSFQALGGHRTSHTKPNF- 60
           MVDC   LSK+EEP RKN     PAADS K+FVCKTCNREFSSFQALGGHR SH KPNF 
Sbjct: 24  MVDC---LSKVEEPWRKN---TAPAADSGKVFVCKTCNREFSSFQALGGHRASHKKPNFK 83

Query: 61  NANGPPTKSKAHECPICGLDFPIGQALGGHMRRHR-NTAAAAAVLKKSDGCGKRVFELDL 120
           +ANGPPTK KAH+CPICGL FP+GQALGGHMRRHR +T  AAAVL+KSDG  KR F LDL
Sbjct: 84  DANGPPTKPKAHDCPICGLHFPMGQALGGHMRRHRTSTTTAAAVLEKSDGGEKRGFGLDL 143

Query: 121 NLPPLENNLNLKL 132
           NL P+ENNL L+L
Sbjct: 144 NLTPIENNLKLQL 150

[Close]

BLAST of Carg12339 vs. ExPASy TrEMBL
Match: A0A6J1GAT3 (zinc finger protein ZAT12-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111452472 PE=4 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 2.9e-43
Identity = 89/90 (98.89%), Postives = 89/90 (98.89%), Query Frame = 0


Query: 46  ALGGHRTSHTKPNFNANGPPTKSKAHECPICGLDFPIGQALGGHMRRHRNTAAAAAVLKK 105
           ALGGHRTSHTKPNFNANGPPTKSKAHECPICGLDFPIGQALGGHMRRHRNT AAAAVLKK
Sbjct: 16  ALGGHRTSHTKPNFNANGPPTKSKAHECPICGLDFPIGQALGGHMRRHRNT-AAAAVLKK 75

Query: 106 SDGCGKRVFELDLNLPPLENNLNLKLQLSL 136
           SDGCGKRVFELDLNLPPLENNLNLKLQLSL
Sbjct: 76  SDGCGKRVFELDLNLPPLENNLNLKLQLSL 104

[Close]

BLAST of Carg12339 vs. ExPASy TrEMBL
Match: A0A6J1KAY6 (zinc finger protein ZAT12-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111492663 PE=4 SV=1)

HSP 1 Score: 182.6 bits (462), Expect = 1.1e-42
Identity = 88/90 (97.78%), Postives = 89/90 (98.89%), Query Frame = 0


Query: 46  ALGGHRTSHTKPNFNANGPPTKSKAHECPICGLDFPIGQALGGHMRRHRNTAAAAAVLKK 105
           ALGGHRTSHTKPNFNANGPPTKSKAHECPICGLDFPIGQALGGHMRRHR+T AAAAVLKK
Sbjct: 16  ALGGHRTSHTKPNFNANGPPTKSKAHECPICGLDFPIGQALGGHMRRHRDT-AAAAVLKK 75

Query: 106 SDGCGKRVFELDLNLPPLENNLNLKLQLSL 136
           SDGCGKRVFELDLNLPPLENNLNLKLQLSL
Sbjct: 76  SDGCGKRVFELDLNLPPLENNLNLKLQLSL 104

[Close]

BLAST of Carg12339 vs. TAIR 10
Match: AT5G59820.1 (C2H2-type zinc finger family protein )

HSP 1 Score: 123.6 bits (309), Expect = 1.2e-28
Identity = 72/150 (48.00%), Postives = 91/150 (60.67%), Query Frame = 0


Query: 3   DCLMLLSKMEEPRRKNGFAPTPAADSDKIFVCKTCNREFSSFQALGGHRTSHTKPNFNAN 62
           +CLMLLS++ +     G       D  ++F CKTC ++F SFQALGGHR SH KPN +A 
Sbjct: 17  NCLMLLSRVGQENVDGG-------DQKRVFTCKTCLKQFHSFQALGGHRASHKKPNNDAL 76

Query: 63  G----PPTKSKAHECPICGLDFPIGQALGGHMRRHRNTAAAA---------------AVL 122
                   K+ +H CPICG++FP+GQALGGHMRRHRN + AA                 L
Sbjct: 77  SSGLMKKVKTSSHPCPICGVEFPMGQALGGHMRRHRNESGAAGGALVTRALLPEPTVTTL 136

Query: 123 KKSDGCGKRVFELDLNLPPLENNLNLKLQL 134
           KKS   GKRV  LDL+L  + +NLNLKL+L
Sbjct: 137 KKSSS-GKRVACLDLSL-GMVDNLNLKLEL 157

[Close]

BLAST of Carg12339 vs. TAIR 10
Match: AT2G28710.1 (C2H2-type zinc finger family protein )

HSP 1 Score: 121.3 bits (303), Expect = 5.9e-28
Identity = 72/150 (48.00%), Postives = 88/150 (58.67%), Query Frame = 0


Query: 1   MVDCLMLLSKMEEPRRKNGFAPTPAADSDKIFVCKTCNREFSSFQALGGHRTSHTK-PNF 60
           M +CL+LLSK  +   K+           ++F CKTCN+EF SFQALGGHR SH +    
Sbjct: 14  MANCLILLSKAHQNDTKS-----------RVFACKTCNKEFPSFQALGGHRASHRRSAAL 73

Query: 61  NANGPPT----KSKAHECPICGLDFPIGQALGGHMRRHRN-----------TAAAAAVLK 120
             + PP+    K   HECPICG +F +GQALGGHMR+HR             A A   +K
Sbjct: 74  EGHAPPSPKRVKPVKHECPICGAEFAVGQALGGHMRKHRGGSGGGGGRSLAPATAPVTMK 133

Query: 121 KS-DGCGKRVFELDLNLPPLENNLNLKLQL 134
           KS  G GKRV  LDLNL PLEN  +LKL+L
Sbjct: 134 KSGGGNGKRVLCLDLNLTPLENE-DLKLEL 151

[Close]

BLAST of Carg12339 vs. TAIR 10
Match: AT3G46090.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 109.8 bits (273), Expect = 1.8e-24
Identity = 65/150 (43.33%), Postives = 87/150 (58.00%), Query Frame = 0


Query: 4   CLMLLSKMEEPRRKNGFAPTPAADSDKIFVCKTCNREFSSFQALGGHRTSHTK------P 63
           CLMLLS++       G         +++F CKTC +EFSSFQALGGHR SH K      P
Sbjct: 19  CLMLLSRV-------GECGGGCGGDERVFRCKTCLKEFSSFQALGGHRASHKKLINSDNP 78

Query: 64  NFNANGPPTKSK-AHECPICGLDFPIGQALGGHMRRHRNTAAAAAVLKKS---------- 123
           +   +    K+K +H CPICG+ FP+GQALGGHMRRHRN   + +++ +S          
Sbjct: 79  SLLGSLSNKKTKTSHPCPICGVKFPMGQALGGHMRRHRNEKVSGSLVTRSFLPETTTVTA 138

Query: 124 ---DGCGKRVFELDLNLPPLENNLNLKLQL 134
                 GKRV  LDL+L  +E+ +N KL+L
Sbjct: 139 LKKFSSGKRVACLDLDLDSMESLVNWKLEL 161

[Close]

BLAST of Carg12339 vs. TAIR 10
Match: AT3G46070.1 (C2H2-type zinc finger family protein )

HSP 1 Score: 104.8 bits (260), Expect = 5.7e-23
Identity = 68/160 (42.50%), Postives = 85/160 (53.12%), Query Frame = 0


Query: 4   CLMLLSKM-EEPRRKNGFAPTPAADSDKIFVCKTCNREFSSFQALGGHRTSHTK----PN 63
           CLMLLS + E   RK            ++F CKTC R+F SFQALGGHR SH+K     +
Sbjct: 18  CLMLLSGIGEHDGRKK-----------RVFRCKTCERDFDSFQALGGHRASHSKLTNSDD 77

Query: 64  FNANGPP-------TKSKAHECPICGLDFPIGQALGGHMRRHRN---------------- 123
            +  G P       T + AH CPICGL+FP+GQALGGHMR+HRN                
Sbjct: 78  KSLPGSPKKKPKTTTTTTAHTCPICGLEFPMGQALGGHMRKHRNEKEREKASNVLVTHSF 137

Query: 124 --TAAAAAVLKKSDGCGKRVFELDLNLPPLENNLNLKLQL 134
                    LKKS   GKRV  LD +L  +E+ +N +L+L
Sbjct: 138 MPETTTVTTLKKSSS-GKRVACLDFDLTSVESFVNTELEL 165

[Close]

BLAST of Carg12339 vs. TAIR 10
Match: AT2G37430.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 104.0 bits (258), Expect = 9.7e-23
Identity = 61/143 (42.66%), Postives = 78/143 (54.55%), Query Frame = 0


Query: 4   CLMLLSKMEEPRRKNGFAPTPAADSDKIFVCKTCNREFSSFQALGGHRTSHTKPNFNANG 63
           CLM+L++    ++      T +  S++ F CKTCN+ FSSFQALGGHR SH KP      
Sbjct: 20  CLMILAQTSMVKQIGLNQHTESHTSNQ-FECKTCNKRFSSFQALGGHRASHKKPKLTVEQ 79

Query: 64  PPTK--------SKAHECPICGLDFPIGQALGGHMRRHRNTAA-----------AAAVLK 123
              K        +  H+C IC   F  GQALGGHMRRHR++             +  VLK
Sbjct: 80  KDVKHLSNDYKGNHFHKCSICSQSFGTGQALGGHMRRHRSSMTVEPSFISPMIPSMPVLK 139

Query: 124 KSDGCGKRVFELDLNLPPLENNL 128
           +  G  KR+  LDLNL PLEN+L
Sbjct: 140 RC-GSSKRILSLDLNLTPLENDL 160

The following BLAST results are available for this feature:

BLAST of Carg12339 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7036896.1	5.6e-73	100.00	Zinc finger protein ZAT12, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023524575.1	1.8e-71	98.50	zinc finger protein ZAT12-like [Cucurbita pepo subsp. pepo]	[more]
XP_022949001.1	4.0e-71	99.26	zinc finger protein ZAT12-like isoform X1 [Cucurbita moschata]	[more]
XP_022997819.1	2.0e-70	97.78	zinc finger protein ZAT12-like isoform X1 [Cucurbita maxima]	[more]
KAG6607211.1	2.5e-65	99.20	Zinc finger protein ZAT12, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Carg12339 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q42410	1.7e-27	48.00	Zinc finger protein ZAT12 OS=Arabidopsis thaliana OX=3702 GN=ZAT12 PE=2 SV=1	[more]
Q42453	2.5e-23	43.33	Zinc finger protein ZAT7 OS=Arabidopsis thaliana OX=3702 GN=ZAT7 PE=2 SV=1	[more]
Q9SLD4	1.4e-21	42.66	Zinc finger protein ZAT11 OS=Arabidopsis thaliana OX=3702 GN=ZAT11 PE=2 SV=1	[more]
Q9LX85	3.0e-21	42.48	Zinc finger protein ZAT8 OS=Arabidopsis thaliana OX=3702 GN=ZAT8 PE=2 SV=1	[more]
Q9LFG0	1.1e-18	40.56	Zinc finger protein ZAT18 OS=Arabidopsis thaliana OX=3702 GN=ZAT18 PE=2 SV=1	[more]

BLAST of Carg12339 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GAS1	2.0e-71	99.26	zinc finger protein ZAT12-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC11...	[more]
A0A6J1KCM4	9.7e-71	97.78	zinc finger protein ZAT12-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC1114...	[more]
A0A1S3C722	6.3e-46	75.19	zinc finger protein ZAT12-like OS=Cucumis melo OX=3656 GN=LOC103497207 PE=4 SV=1	[more]
A0A6J1GAT3	2.9e-43	98.89	zinc finger protein ZAT12-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC11...	[more]
A0A6J1KAY6	1.1e-42	97.78	zinc finger protein ZAT12-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC1114...	[more]

BLAST of Carg12339 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G59820.1	1.2e-28	48.00	C2H2-type zinc finger family protein	[more]
AT2G28710.1	5.9e-28	48.00	C2H2-type zinc finger family protein	[more]
AT3G46090.1	1.8e-24	43.33	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT3G46070.1	5.7e-23	42.50	C2H2-type zinc finger family protein	[more]
AT2G37430.1	9.7e-23	42.66	C2H2 and C2HC zinc fingers superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013087	Zinc finger C2H2-type	SMART	SM00355	c2h2final6	coord: 71..93 e-value: 0.33 score: 20.0 coord: 32..54 e-value: 0.28 score: 20.3
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 34..54
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 73..93
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 71..98 score: 8.828978
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 32..59 score: 10.117529
None	No IPR available	PFAM	PF13912	zf-C2H2_6	coord: 32..56 e-value: 5.7E-11 score: 42.1 coord: 70..94 e-value: 3.6E-9 score: 36.4
None	No IPR available	GENE3D	3.30.160.60	Classic Zinc Finger	coord: 30..93 e-value: 1.6E-10 score: 43.1
None	No IPR available	PANTHER	PTHR26374	ZINC FINGER PROTEIN ZAT5	coord: 1..130
None	No IPR available	PANTHER	PTHR26374:SF379	ZINC FINGER PROTEIN ZAT12	coord: 1..130
IPR036236	Zinc finger C2H2 superfamily	SUPERFAMILY	57667	beta-beta-alpha zinc fingers	coord: 30..93

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg12339-RA	Carg12339-RA	mRNA