
Carg12330 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTGATGTTGGTCAGAACAACACCGGTGATTTTCCTGCTGTTCCTACCCATGGCGGTCAATATGTGCAGTATAATATCTTCGGGAATCCGTTTGAAATCACCTCCAAATATCGTCCGCCTATCATGCCTGTAGGTCGCGGCGCCTACGGAATCGTTTGGTATTTTTCATCTGTTTTTGTTGGAATTGTTGGTGATCTTGTCTGGAAACGCCTTTGGATTGAGTTTTTGTCTTATACCTTTTTTTTTTTTGTTGGATTTGGTTTGTTTGTAGTTCGATTTTGAATTCGGAGACCAACGAGATGGTTGCGGTTAAGAAGATTGCCAACGCGTTTGATAATCATATGGATGCGAAACGGACGCTCCGTGAGATCAAGCTTCTCCGGCATTTGGATCACGAAAATGTGAGAGAGTTTATCCCTGTAGTTGCTGTAATTGTTGTTTCGATTAATCCATGCGATTTAGATTTCTTCCGTTTGTGTCTGTGGATTCAATTTGGTGTTCATCTGATTTTGGACGGCGTTTAATCATTAACCGCGCTCAGCGTCGTTGAATTGCAAAATATTGATCGATCAATTCTTTTGTCTAGAATAGTTCTTGGCGGTGATTGACTAATCTCAATAATTTTGTGTTGTTCTTGGTGGCGTGGGTAATCATGATAGAATCCTAGAAAGTTCATTTTGAATCTATTCAATTGTGATGTGCCGGTCTGTTTAAGCAATTGAACAGATTATTCTTGGTGATTTGGCCCATAACCTATAGTAGCATTTGGTTCTGCATAATTTTGTTGATTGTGGGAAGTTTTTGGGATTTGACTTTTTAGAATTATACTTTACTGGAATTGGAACTGCTTTATATGATGGGTATGTTGCTTTCTTTATACTTCCTGATTTGAAGGAAGTTTTTAAATAGTTGTTCTTTAGGGCCACACACTCATATAGATTGTGATTCATTTGATGTAGGTAATAGGCATAAGAGATGTGATTCCTCCTCCTGTGCGGAGAGAATTCAGTGATGTCTACATTTCCACTGAACTAATGGACACCGATCTTCACCAAATAATCCGCTCAAACCAAACTTTATCAGAAGAGCATTGTCAGGTAGGACGACGAGGTCCTTTACTTTGTTCATCATTGATTATGTTAATTGCACCTTTGATTTTTTTTTTCTTCAACTATTCCTCTTGTAATATAAGGTTTGGCTTGCTTTGCAGTATTTCCTTTATCAGATTCTCCGAGGACTTAAATACATACATTCTGCAAATGTCATTCATCGGGACTTGAAACCGAGCAATCTACTGCTTAATGCAAACTGTGATCTTAAAATCTGTGACTTTGGTCTTGCTCGTCCAACTTCGGAAAATGAAAGCATGACAGAATATGTTGTTACGAGATGGTATAGGGCACCTGAGTTACTATTGAACTCTGATTATACAGCTGCTATTGATATATGGTCTGTTGGTTGCATCTATTTGGAGCTTATGAACAGAAGGCCTCTATTTCCAGGCAGGGATCATGTGCATCAGATGCGTTTACTGACTGAGGTAAAACAATCTATACAGAGCTTATGCAGTTTTTTGGTTATAGACTATCCAATTTTGACTATTAAAGATTTAGCTGATGTGAAAATGTACCAGCGGATTTTTGTTCCTGGATAGTTCTTGTGATGTCTCTTAATATGATCATTCTAAGTTTATAATCTGAATTTTGTTGACTATGACACTCTGTCAAAGATAATTTCTTGGTTCTGTTTTGATAGTTTTCATCAGTTTCCATTTGGGATATTGAGTTTGGCCAATGATTGTCAAGTTCTATTTTTCCACTAAAAAAAGCTAATGTTCTTTCATTTGTTCTGAAATTGATTGCCTTCTCCTTGTATCATTTTAATTATCAGCTTCTTGGCACACCAACCGAATCTGATCTTGGTTTCATTCGAAACGAAGACTCGAAGAGATATCTTCGGCAGCTACCTCCACATCCTCGTCAGCCATTAGCAACAGTTTTCCCTCATGTTCATCCTTTGGCAATTGATCTTGTGGATAGAATGTTGACGTTTGATCCAACCAGGAGAATTACTGGTAAATATTTATCAAATCTCAATTCTTTAATCATTCGATGGTTTGAATGAATTAATTGCTCGTGAGATACAATGTTCATGATAGTTTAGTCATTAGAATGTGTGGAGTAGGATACATTAAATTATGACTTCTAGATTTCCTTGCAATTTTCTTTCAAGGTATAAACTATCATGGATTGGTTCAATATTCAACGTTGGAAATTCATATTGTCATTTGAGGTCATTGTTTAAACTTTAGCATTAGGTTTCTGAAATACAATGCCTTACAAGTTTTTTCATTCTAAGTATTATAAGATCGATAGTTGTCATTTGGGATTAGTGGTGTGCATGTGCTGATCAAGACAATCTAAATTATTTCCTCCATTGGCATGGAATTTCAGCATTAAGCAGCAAGCTATACGTTTATGTTCCAATATCTTCTTGTCATTTCTCCTCCCATTTCCTCGCTGTTGCTGGCCATGCTCTTCATGTTCAGAATAGATGGCTGTTGAAATAGTTTTCCTTTTCACATCATTCCTTGGTTTAACTTCTCGAATTTTTGTTTTGAACAGTTGAAGAAGCATTGGCACATCCATACCTAGAGAGACTGCACGACGTAGCTGATGAGCCAGTTTGCCCTGAGCCATTCTCGTTCGAGTTTGAGCAACAATACCTGGATGAAGAGCAGATGAAGGAGATGATTTACAGAGAAGCATTGGCACTCAATCCAGAATTTGCATGACCATAAATGTAGATGTCGTCCTCCTGAGCAACTGCAGCGACTTTGCAAATATGGAATAACACGCGACAAAAGGATCAGGTTGGTATACGAAAACGAAACATCGTTAATTAAGCTTAGGATATGTTTGAGAGTGATTTTGGAATGACCCAAACCACCTTCATCATGTCCAAAATTTACTAAAAAGAACATGACAAAAGTGATTTTGATCCTTCCAAAATC ATGGCTGATGTTGGTCAGAACAACACCGGTGATTTTCCTGCTGTTCCTACCCATGGCGGTCAATATGTGCAGTATAATATCTTCGGGAATCCGTTTGAAATCACCTCCAAATATCGTCCGCCTATCATGCCTGTAGGTCGCGGCGCCTACGGAATCGTTTGGTATTTTTCATCTGTTTTTGTTGGAATTGTTGGTGATCTTGTAATAGGCATAAGAGATGTGATTCCTCCTCCTGTGCGGAGAGAATTCAGTGATGTCTACATTTCCACTGAACTAATGGACACCGATCTTCACCAAATAATCCGCTCAAACCAAACTTTATCAGAAGAGCATTGTCAGCTTCTTGGCACACCAACCGAATCTGATCTTGGTTTCATTCGAAACGAAGACTCGAAGAGATATCTTCGGCAGCTACCTCCACATCCTCGTCAGCCATTAGCAACAGTTTTCCCTCATGTTCATCCTTTGGCAATTGATCTTGTGGATAGAATGTTGACGTTTGATCCAACCAGGAGAATTACTGTTGAAGAAGCATTGGCACATCCATACCTAGAGAGACTGCACGACGTAGCTGATGAGCCAGTTTGCCCTGAGCCATTCTCGTTCGAGTTTGAGCAACAATACCTGGATGAAGAGCAGATGAAGGAGATGATTTACAGAGAAGCATTGGCACTCAATCCAGAATTTGCATGACCATAAATGTAGATGTCGTCCTCCTGAGCAACTGCAGCGACTTTGCAAATATGGAATAACACGCGACAAAAGGATCAGGTTGGTATACGAAAACGAAACATCGTTAATTAAGCTTAGGATATGTTTGAGAGTGATTTTGGAATGACCCAAACCACCTTCATCATGTCCAAAATTTACTAAAAAGAACATGACAAAAGTGATTTTGATCCTTCCAAAATC ATGGCTGATGTTGGTCAGAACAACACCGGTGATTTTCCTGCTGTTCCTACCCATGGCGGTCAATATGTGCAGTATAATATCTTCGGGAATCCGTTTGAAATCACCTCCAAATATCGTCCGCCTATCATGCCTGTAGGTCGCGGCGCCTACGGAATCGTTTGGTATTTTTCATCTGTTTTTGTTGGAATTGTTGGTGATCTTGTAATAGGCATAAGAGATGTGATTCCTCCTCCTGTGCGGAGAGAATTCAGTGATGTCTACATTTCCACTGAACTAATGGACACCGATCTTCACCAAATAATCCGCTCAAACCAAACTTTATCAGAAGAGCATTGTCAGCTTCTTGGCACACCAACCGAATCTGATCTTGGTTTCATTCGAAACGAAGACTCGAAGAGATATCTTCGGCAGCTACCTCCACATCCTCGTCAGCCATTAGCAACAGTTTTCCCTCATGTTCATCCTTTGGCAATTGATCTTGTGGATAGAATGTTGACGTTTGATCCAACCAGGAGAATTACTGTTGAAGAAGCATTGGCACATCCATACCTAGAGAGACTGCACGACGTAGCTGATGAGCCAGTTTGCCCTGAGCCATTCTCGTTCGAGTTTGAGCAACAATACCTGGATGAAGAGCAGATGAAGGAGATGATTTACAGAGAAGCATTGGCACTCAATCCAGAATTTGCATGA MADVGQNNTGDFPAVPTHGGQYVQYNIFGNPFEITSKYRPPIMPVGRGAYGIVWYFSSVFVGIVGDLVIGIRDVIPPPVRREFSDVYISTELMDTDLHQIIRSNQTLSEEHCQLLGTPTESDLGFIRNEDSKRYLRQLPPHPRQPLATVFPHVHPLAIDLVDRMLTFDPTRRITVEEALAHPYLERLHDVADEPVCPEPFSFEFEQQYLDEEQMKEMIYREALALNPEFA Homology
BLAST of Carg12330 vs. NCBI nr
Match: KAG7036887.1 (Mitogen-activated protein kinase 3, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 476.9 bits (1226), Expect = 1.0e-130 Identity = 230/230 (100.00%), Postives = 230/230 (100.00%), Query Frame = 0
BLAST of Carg12330 vs. NCBI nr
Match: KAG6607201.1 (Mitogen-activated protein kinase 3, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 380.6 bits (976), Expect = 9.8e-102 Identity = 218/370 (58.92%), Postives = 220/370 (59.46%), Query Frame = 0
BLAST of Carg12330 vs. NCBI nr
Match: XP_022948699.1 (mitogen-activated protein kinase 3-like [Cucurbita moschata]) HSP 1 Score: 377.9 bits (969), Expect = 6.4e-101 Identity = 217/370 (58.65%), Postives = 219/370 (59.19%), Query Frame = 0
BLAST of Carg12330 vs. NCBI nr
Match: XP_022997943.1 (mitogen-activated protein kinase 3-like isoform X1 [Cucurbita maxima]) HSP 1 Score: 375.2 bits (962), Expect = 4.1e-100 Identity = 214/373 (57.37%), Postives = 219/373 (58.71%), Query Frame = 0
BLAST of Carg12330 vs. NCBI nr
Match: XP_038895412.1 (mitogen-activated protein kinase 3 [Benincasa hispida]) HSP 1 Score: 366.3 bits (939), Expect = 1.9e-97 Identity = 208/373 (55.76%), Postives = 217/373 (58.18%), Query Frame = 0
BLAST of Carg12330 vs. ExPASy Swiss-Prot
Match: Q39023 (Mitogen-activated protein kinase 3 OS=Arabidopsis thaliana OX=3702 GN=MPK3 PE=1 SV=2) HSP 1 Score: 279.6 bits (714), Expect = 3.1e-74 Identity = 167/371 (45.01%), Postives = 192/371 (51.75%), Query Frame = 0
BLAST of Carg12330 vs. ExPASy Swiss-Prot
Match: Q07176 (Mitogen-activated protein kinase homolog MMK1 OS=Medicago sativa OX=3879 GN=MMK1 PE=1 SV=1) HSP 1 Score: 252.7 bits (644), Expect = 4.1e-66 Identity = 148/360 (41.11%), Postives = 183/360 (50.83%), Query Frame = 0
BLAST of Carg12330 vs. ExPASy Swiss-Prot
Match: Q06060 (Mitogen-activated protein kinase homolog D5 OS=Pisum sativum OX=3888 PE=2 SV=1) HSP 1 Score: 248.1 bits (632), Expect = 1.0e-64 Identity = 147/360 (40.83%), Postives = 181/360 (50.28%), Query Frame = 0
BLAST of Carg12330 vs. ExPASy Swiss-Prot
Match: A2XFC8 (Mitogen-activated protein kinase 5 OS=Oryza sativa subsp. indica OX=39946 GN=MPK5 PE=1 SV=2) HSP 1 Score: 245.7 bits (626), Expect = 5.0e-64 Identity = 140/358 (39.11%), Postives = 184/358 (51.40%), Query Frame = 0
BLAST of Carg12330 vs. ExPASy Swiss-Prot
Match: Q10N20 (Mitogen-activated protein kinase 5 OS=Oryza sativa subsp. japonica OX=39947 GN=MPK5 PE=1 SV=1) HSP 1 Score: 245.7 bits (626), Expect = 5.0e-64 Identity = 140/358 (39.11%), Postives = 184/358 (51.40%), Query Frame = 0
BLAST of Carg12330 vs. ExPASy TrEMBL
Match: A0A6J1GAP2 (Mitogen-activated protein kinase OS=Cucurbita moschata OX=3662 GN=LOC111452292 PE=3 SV=1) HSP 1 Score: 377.9 bits (969), Expect = 3.1e-101 Identity = 217/370 (58.65%), Postives = 219/370 (59.19%), Query Frame = 0
BLAST of Carg12330 vs. ExPASy TrEMBL
Match: A0A6J1KFE1 (Mitogen-activated protein kinase OS=Cucurbita maxima OX=3661 GN=LOC111492741 PE=3 SV=1) HSP 1 Score: 375.2 bits (962), Expect = 2.0e-100 Identity = 214/373 (57.37%), Postives = 219/373 (58.71%), Query Frame = 0
BLAST of Carg12330 vs. ExPASy TrEMBL
Match: A0A5A7T8I9 (Mitogen-activated protein kinase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold918G00050 PE=3 SV=1) HSP 1 Score: 365.9 bits (938), Expect = 1.2e-97 Identity = 207/362 (57.18%), Postives = 219/362 (60.50%), Query Frame = 0
BLAST of Carg12330 vs. ExPASy TrEMBL
Match: A0A5D3BXD1 (Mitogen-activated protein kinase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold968G00210 PE=3 SV=1) HSP 1 Score: 365.9 bits (938), Expect = 1.2e-97 Identity = 207/362 (57.18%), Postives = 219/362 (60.50%), Query Frame = 0
BLAST of Carg12330 vs. ExPASy TrEMBL
Match: Q0R4I2 (Mitogen-activated protein kinase OS=Cucumis sativus OX=3659 GN=TIPK PE=2 SV=1) HSP 1 Score: 363.6 bits (932), Expect = 6.0e-97 Identity = 206/373 (55.23%), Postives = 217/373 (58.18%), Query Frame = 0
BLAST of Carg12330 vs. TAIR 10
Match: AT3G45640.1 (mitogen-activated protein kinase 3 ) HSP 1 Score: 279.6 bits (714), Expect = 2.2e-75 Identity = 167/371 (45.01%), Postives = 192/371 (51.75%), Query Frame = 0
BLAST of Carg12330 vs. TAIR 10
Match: AT2G43790.1 (MAP kinase 6 ) HSP 1 Score: 245.0 bits (624), Expect = 6.0e-65 Identity = 143/360 (39.72%), Postives = 181/360 (50.28%), Query Frame = 0
BLAST of Carg12330 vs. TAIR 10
Match: AT4G01370.1 (MAP kinase 4 ) HSP 1 Score: 208.0 bits (528), Expect = 8.1e-54 Identity = 123/355 (34.65%), Postives = 167/355 (47.04%), Query Frame = 0
BLAST of Carg12330 vs. TAIR 10
Match: AT2G46070.1 (mitogen-activated protein kinase 12 ) HSP 1 Score: 186.4 bits (472), Expect = 2.5e-47 Identity = 120/369 (32.52%), Postives = 165/369 (44.72%), Query Frame = 0
BLAST of Carg12330 vs. TAIR 10
Match: AT1G01560.2 (MAP kinase 11 ) HSP 1 Score: 184.5 bits (467), Expect = 9.6e-47 Identity = 118/354 (33.33%), Postives = 159/354 (44.92%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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