Carg12322 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg12322
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
Location	Carg_Chr01: 2936091 .. 2942270 (+)
RNA-Seq Expression	Carg12322
Synteny	Carg12322

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGTTCTTCGTCTTCTCAGTCTTCCGTCATTCTGAAACTTTCCACTCAAATTTGAGACTGATTTCTCTTTCAAAGCCGCAATCTCAAACTCCATTAGGAGATTGATTTCTCTTTCAAATTCGCAATCTCAAGCTTGTAAGTGTTGTTTCCTCCACTCTTCTTCTTTTTGCTAAACATTCCATGCTGAATTTGAGGTGGTTTTGTTTTGTTTTCCGATTTTAGTTCTGTAATTTTTTTTTTTTTTTTGTTTCTTCGAGGAGTGATCTGTGAATTGTCTGTTTAGGTGTGTACCTTGGACTGAATTTTGTAATTTTTTTAATAACCTTTTCTAGCTCCTTGGATTCTGAAATTTTCTATTAGTTTTTGTTTTTGTTTCTTTCTGGCGATGCATGTTATGGAAAAGTACTAATGGTTTTCAGTTGGACAGCTATTGCTTAGAATGATGAATTTTTGGTACATGCATTTCTTAGACGGTTGTTTTACTTGTATTTCTGAGACGGTTGCTTTACTAACTGGAGAAGTTGTTTGAGTTTTATATTTGAGTTGGATCTTGATGAATCTACGGTTTGTTGTAGCGACGATCGTGATCTGAAATGACTTCTGTTGGAACGCTACCGTCGCATCTTTCGGGGTTGAAAGGCGGAAATGTGAACTTAGGATTCGCGAATCGGTTGCAATTGGTAAAAGTCTCTGATTTGAAGAGCATTAGGTCTCCTGGAAGGAAGGTTTTGGTCATACGGAATTCCAATCCTGGCCCTGATATTGCGGAGCTTCAGCCCGCATCGGAAGGGAGTTCTCTCCTGGGTAAATTTTTAACAATGCATGTGCATTATTTAGCCCTCGTTTTATCCAACTTATACTTGATTTTTGGTGGCAAATAAAGGACATGAAAGTCAAATATGGATTTTACTTTTGTTGCCTTTTTGTCCACTCTTACTCGATATGAGAGAGAAAATGATCTATTGTTAAACAATTTACGAAGTGGGAGCATTTGAAAGTAGGATGGAGAACATGGATTAAAAAATCATCCTTAACCCAAAAGTATATGTTAACCAAAAGTATGTTTAAGATTAAATAGGGAGAAAATCATGATGATATCATTTCAAGCACAGGAGTTCTGATACTGATAAGTAATTCTTTCAATATATATTATTCGTCCTTAACAGTAAGGAAGGAATTGTATTTTTCCCATAAATATACTGAGTACCGATAAGACAAAAAGCAAAAAGCATCTACCAGTCATAAAAAATATTTTTGTTAACCTATTGTTGCATGTAAGAATGGATCGCTGAATTACGATGACTTTAATGAATCCTCAATAGCGATGAGATCTAAGGAAATTAGCAATGCATTACACACGTGCAACCTAGTGGTTGATGTTAAAAAGAAAGCTAGTTTCGTTTTTATCCACGTTTCTTCACTTTCTGAAGAGCAGAAGATAAATGTTATTTAAGTATTGCCAAAATGTACTTTAAAGGTTGGTTTTATTTAATTAGATAATCATCTTCCATTGCAGTTCCTCGACAAAAGTACTGTGAATCCCTAAACAAAACAGTCAGGAGGAAAACACGGACAGTGATGGTTGGAAATGTTGCCCTTGGTAGTGAGCATCCCATAAGGATTCAAACAATGACAACAACTGATACAAAAGATGTTGCTGGAACAGTTGAACAGGTACTTTAATATTTCTTCTATTTCAGTTATGTTTTCATTTTGCAATCCCTTCATCAGTATTCTGACAATAAAAATACTCTTTGATACTCATTTTATTGTGAGATGTTGTAGTCAATGGAACATGAGTATCGCAATTATTAGTGCTGAGCGAGTTGAAAGCTGAAAATCAAATGAGGCTATAACTATGTGATAAAAGTTCTTGTTGTAGTTTGTCCAAATTATTCTTGATTTCTTCTCATGGACAATATGGATGTTGAAGTCTATAGCAACTAAGAAAGACATCACCATAATAGAAAAACTTTGATACTTTATATTGTGGTGTCATGTACTTTTTGTAATTTTGAAGATGACCAATTTGTATTAGTAGGTCATGAAAATAGCTGACAAGGGAGCCAATCTTGTGCGGATAACAGTTCAGGGGAAGAAAGAAGCAGATGCATGTTTTGAAATCAAGAACACCCTTGTGCAGAAAAAGTAGGTTTAATATTTATATATTGAACATTTTTTGGAGCTTGGTCTCTATAATTTATGATGTCTCTGAAAATTCTATTTTGCAGTTATAATATACCTCTGGTCGCAGATATTCACTTTGCTCCTCCCATTGCATTGAGAGTTGCCGAGTGCTTCGATAAAATTCGTGTAAACCCTGGAAATTTTGGTATGCTATTTCTAATACTTACATTCTGCATTATTTCTTCAGAAAGATTGTTTGTGTCAAGCTCACGTCTAATGCAGCTGATAGGCGGGCTCAATTTGAAAAGCTAGAGTACACTGAGGATGATTATCAAAAAGAACTTGAGCATATTGAGGAGGTAAAACTTCTTCTCACTTTTTTCCCCCTTCATATGTTGCTGGAGCATATTGCAATTTTAGTACTCGGGAATGGAAACTAATATTACAAAAGGCACGTGTTACCAGTTAGCAATATGGTCAGGATAGTCTGTCATCAACAAATTCTAAATTATTGTGATTACTTGTTTTTTAATTTGTAAAATTTGCAATAATGAACCTGATTCTTTTCTTAAATAATGGGGTTGGGGAAGTTCTCCATGGATAATATTTTTTTCCTGTTTTAATTGTGAAAGGTTTTTACTCCGTTGGTTGAGAAATGTAAGAAGTATGGAAGAGCAATTCGCATTGGAACAAATCATGGGAGCCTTTCAGATCGTATAATGAGCTACTTTGGCGATTCTCCAAGGGGAATGGTTAGCAATTTTTCCTCTAAATTTTTATAAACAACCTTTTTTTCTTGATTTCTTTTTTGAACTTAGCATAGGGATGTTATTAATAGAAGTTCTCCCAAGTCCTAACAGGTTGAATCGGCATTTGAGTTTGCAAGAATATGCCGAAAGTTGGACTTCCATAATTTTGTCTTTTCCATGAAAGCAAGCAATCCAGTAATTATGGTTCAGGCATATCGTTTGCTTGTATCTGAATTGTATGTCAAAGGCTGGGATTATCCATTACACCTTGGAGTTACTGAAGCCGGAGAAGGTGAGGATGGACGAATGAAGTCTGCCATTGGCATTGGGACCCTTCTTCAGGTAACTGTCACCAAATGGAGTGCTGATAGTCCTATATCATATCATTGCCTTTCACACACAAATTGTATGTAAACTCTGGGTCCCAATATCACTAGGTTTTCCTTTTTCAAGAGTTCTATTTTCTTGTAAAGAATCTGTTGACAATTACTCTTTCAGTTCTCTGCAAATTTCTTTCGAGTCATTGTGGTTGGGTTGATCACATACCCCAAAGAATTTGCACATTTAGAAGCCATATCAATGTGGAGCATTTAGAAAATTATTTCTGTTGTACAGGATGGCTTGGGTGATACTATTAGAGTTTCTCTAACAGAACAACCCGAGGAGGAGATAGATCCATGCAGAAGGCTGGCAACCCTTGGTATGAGAGCAGCTGAACTTCAGCAAGGAGTGGTAGGACCCTTCTTTTGTTGTTGTTGTTGTTGTTGTTGTTGTTTTGTGTGGTAATTCTTATATGTATAATCTCTTTAATCTGAATATTGTACTCACTACTCACAAATCTTTCCTTGTCTATAAGGTCCCATTCGAGGAAAAACACAGACACTATTTTACTTTTCAGCGTCGATCTGGCCAGTTGCCCATGCAAAAGGAGGTCAGCTTTTTATGATCTTTGTACTTTGCCCTGCTGCTGTATGTTCTTAGACTAAGATAAATGATTGATTGTGATACAGGGTGAGGAGGTGGATTATAGAGGTGTCTTGCACCGTGATGGCTCTGTTCTCATGTCGGTTTCCTTGGATCAATTGAAGGTGCACTAAAACTTTCCTAATTTCAGCTCCATGGGGTATCCCAATATGAGAAAGGTGTGGAAACTATCTAACTTCTTGTTTTCCTACCTCCAGGTGCCAGAACTTCTGTACAAATCTCTTGCAGCAAAGCTTGTTGTTGGCATGCCGTTTAGGGTATAATTTATTCTGGTTTCTGTATAAGATAATCCCAGTTTTTTCTACTTTCTATTCTTTTTCCTCACAGTTTTTGTCAATTTGGTTAGGATCTAGCCACAGTGGATTCAATCTTACTGAGAGAGCTTCCTACAGTAGATGATGCTAATGGTGTAAGAACTTCCCTTTCGGTTTCTGATACGTTTCTATTTTTGCTGAGTGGGGAGGGGGGCAAATAGAAGTTGTTGTTGCTTTTAATTTTTTTTTTTTTTCTAAGTGCATCTGATGAATCCAAATTTGATTTTCTCTGTCTCATGATCAGCGTCTGGCTCTCAAAAGGCTGATAGACATAAGTATAGGTGTCATAACTCCTTTATCTGAGCAACTTACAAAGCCATTGCCGAATGCCATGGTTCTGGTCAGTCTGAAGGAGTTGTCCTCTGGTGCTCACAAACTTTTACCTGAAGGTATGTGTTTTTCCTGTTCCTGTTAGTTCCGTCTGTTTCTATTTCAGTATGTTCTTTTTCTTTTTATTTTTCTAAATTCCTTGCAACATCCCATGTCAATGAATTTGCTCAGGCACACGGTTGGTTGTTTCTGTACGAGGTGATGAATCATACAATGATCTGGAAATCTTGAAAGAAATTGATGCTACAATGCTTTTCCATGATTTACCATATTCAGAAGACAAAGTCAGCAGAGTGCACGCTGCAAGGAGGTATAATAATATTCCTTTAGGAGCAGTTTATTACTTACTATCTAGAGCAACATTGAGTAGCTTGTCAAATGTTGGTTTCAGGTTATTTGAGTATCTATCAGAGAATGCTCTTAGCTTCCCTGTGATTCATCACATTCAGTTTCCAGAGGGAATTCACAGGTAGTTAAATTGTTCATTAACTTTATTATTTGAAGTGTTCAAGCAACGAGTTTTATTTTCCCTTGCTCATAGAGACGACTTGGTTATTGGTGCTGGTTCCAATGCGGGATCCCTTTTGGTCGATGGCCTCGGAGACGGTGTCCTGTTAGAAGCCCCAGATAAGGATTTCGATTTCGTAAGGAATGCATCCTTCAATTTGCTACAGGGTTGCAGAATGAGGAATACGAAGACCGTAAGAAAGTTTTCTTATGAAATTTATGCTTATTTTCTCACAATTTCTTTACTATGTCTTCTATATTTCTTAGAAAAACATTTGAATTATTGGTCAAAGTCTGATTTCAAAATCCGATTATGAAATCATTCTTAGAAAGTAGATAATAGAAAAACTCGTAGGGGTTATCAAATGTGCCTTTTAGTAAATGATAACTTTTCTGGATTACATCCTTGCACTCCTCACTGCAGGAGTATGTTTCATGCCCATCTTGTGGCAGAACATTGTTTGATCTTCAAGAAATAAGTGCTGAAATTCGGGAAAGGACATCTCATCTTCCTGGAGTTTCCGTAAGTTACACAGATTTTGAACTTTTATTACATGATGATGATGTAAAAAAACTGCAACATTCAATTTAATTTCCTTTCTTCCTAATGTCATCAGATTGCAATTATGGGTTGTATTGTAAACGGTCCTGGGGAGATGGCCGATGCTGACTTTGGGTACGTTGGGGGTTCTCCGGGAAAGATCGATCTTTATGTTGGGAAGGTAACGTCCCGTCGCATCTAATTCTTATACTTCAAACTGATAGTGTATGACAGTGTATCTTATACTTCATTCTTATCTTCATTGAATGGTAGTGTATCTTGATAAGAAGTTTTGTGTTTTCTACAGACCGTGGTGAAGCGTGGAATTGCAATGGAGCATGCGACGGAGGCTCTAATCCAGCTAATGAAAGATCATGGCCGGTGGGTCGACCCTACGACAGAAGAATGAGAGACGTCGACGTGGTACGTGGTAGTTCTGGTTCGGTAGATAAAAGACACAGGAAAGATATAGATGAGGGGAGACCACAGCTTTAATTTGTGTAGTAAGTTAATAATGTCCACCATTGCTCATTGGCTACTGAAAGAGACAGCTTCACAATTGGTACGTAAATGACTCTCTCAACTTCCCTCACAAATAATTAGCAAATATAAAAAGACTTTTTTTTTTT

mRNA sequence

AGTTCTTCGTCTTCTCAGTCTTCCGTCATTCTGAAACTTTCCACTCAAATTTGAGACTGATTTCTCTTTCAAAGCCGCAATCTCAAACTCCATTAGGAGATTGATTTCTCTTTCAAATTCGCAATCTCAAGCTTCGACGATCGTGATCTGAAATGACTTCTGTTGGAACGCTACCGTCGCATCTTTCGGGGTTGAAAGGCGGAAATGTGAACTTAGGATTCGCGAATCGGTTGCAATTGGTAAAAGTCTCTGATTTGAAGAGCATTAGGTCTCCTGGAAGGAAGGTTTTGGTCATACGGAATTCCAATCCTGGCCCTGATATTGCGGAGCTTCAGCCCGCATCGGAAGGGAGTTCTCTCCTGGTTCCTCGACAAAAGTACTGTGAATCCCTAAACAAAACAGTCAGGAGGAAAACACGGACAGTGATGGTTGGAAATGTTGCCCTTGGTAGTGAGCATCCCATAAGGATTCAAACAATGACAACAACTGATACAAAAGATGTTGCTGGAACAGTTGAACAGGTCATGAAAATAGCTGACAAGGGAGCCAATCTTGTGCGGATAACAGTTCAGGGGAAGAAAGAAGCAGATGCATGTTTTGAAATCAAGAACACCCTTGTGCAGAAAAATTATAATATACCTCTGGTCGCAGATATTCACTTTGCTCCTCCCATTGCATTGAGAGTTGCCGAGTGCTTCGATAAAATTCGTGTAAACCCTGGAAATTTTGCTGATAGGCGGGCTCAATTTGAAAAGCTAGAGTACACTGAGGATGATTATCAAAAAGAACTTGAGCATATTGAGGAGGTTTTTACTCCGTTGGTTGAGAAATGTAAGAAGTATGGAAGAGCAATTCGCATTGGAACAAATCATGGGAGCCTTTCAGATCGTATAATGAGCTACTTTGGCGATTCTCCAAGGGGAATGGTTGAATCGGCATTTGAGTTTGCAAGAATATGCCGAAAGTTGGACTTCCATAATTTTGTCTTTTCCATGAAAGCAAGCAATCCAGTAATTATGGTTCAGGCATATCGTTTGCTTGTATCTGAATTGTATGTCAAAGGCTGGGATTATCCATTACACCTTGGAGTTACTGAAGCCGGAGAAGGTGAGGATGGACGAATGAAGTCTGCCATTGGCATTGGGACCCTTCTTCAGGATGGCTTGGGTGATACTATTAGAGTTTCTCTAACAGAACAACCCGAGGAGGAGATAGATCCATGCAGAAGGCTGGCAACCCTTGGTATGAGAGCAGCTGAACTTCAGCAAGGAGTGCGTCGATCTGGCCAGTTGCCCATGCAAAAGGAGGGTGAGGAGGTGGATTATAGAGGTGTCTTGCACCGTGATGGCTCTGTTCTCATGTCGGTTTCCTTGGATCAATTGAAGGTGCCAGAACTTCTGTACAAATCTCTTGCAGCAAAGCTTGTTGTTGGCATGCCGTTTAGGGATCTAGCCACAGTGGATTCAATCTTACTGAGAGAGCTTCCTACAGTAGATGATGCTAATGGTCGTCTGGCTCTCAAAAGGCTGATAGACATAAGTATAGGTGTCATAACTCCTTTATCTGAGCAACTTACAAAGCCATTGCCGAATGCCATGGTTCTGGTCAGTCTGAAGGAGTTGTCCTCTGGTGCTCACAAACTTTTACCTGAAGGCACACGGTTGGTTGTTTCTGTACGAGGTGATGAATCATACAATGATCTGGAAATCTTGAAAGAAATTGATGCTACAATGCTTTTCCATGATTTACCATATTCAGAAGACAAAGTCAGCAGAGTGCACGCTGCAAGGAGGTTATTTGAGTATCTATCAGAGAATGCTCTTAGCTTCCCTGTGATTCATCACATTCAGTTTCCAGAGGGAATTCACAGAGACGACTTGGTTATTGGTGCTGGTTCCAATGCGGGATCCCTTTTGGTCGATGGCCTCGGAGACGGTGTCCTGTTAGAAGCCCCAGATAAGGATTTCGATTTCGTAAGGAATGCATCCTTCAATTTGCTACAGGGTTGCAGAATGAGGAATACGAAGACCGAGTATGTTTCATGCCCATCTTGTGGCAGAACATTGTTTGATCTTCAAGAAATAAGTGCTGAAATTCGGGAAAGGACATCTCATCTTCCTGGAGTTTCCATTGCAATTATGGGTTGTATTGTAAACGGTCCTGGGGAGATGGCCGATGCTGACTTTGGGTACGTTGGGGGTTCTCCGGGAAAGATCGATCTTTATGTTGGGAAGACCGTGGTGAAGCGTGGAATTGCAATGGAGCATGCGACGGAGGCTCTAATCCAGCTAATGAAAGATCATGGCCGGTGGGTCGACCCTACGACAGAAGAATGAGAGACGTCGACGTGGTACGTGGTAGTTCTGGTTCGGTAGATAAAAGACACAGGAAAGATATAGATGAGGGGAGACCACAGCTTTAATTTGTGTAGTAAGTTAATAATGTCCACCATTGCTCATTGGCTACTGAAAGAGACAGCTTCACAATTGGTACGTAAATGACTCTCTCAACTTCCCTCACAAATAATTAGCAAATATAAAAAGACTTTTTTTTTTT

Coding sequence (CDS)

ATGACTTCTGTTGGAACGCTACCGTCGCATCTTTCGGGGTTGAAAGGCGGAAATGTGAACTTAGGATTCGCGAATCGGTTGCAATTGGTAAAAGTCTCTGATTTGAAGAGCATTAGGTCTCCTGGAAGGAAGGTTTTGGTCATACGGAATTCCAATCCTGGCCCTGATATTGCGGAGCTTCAGCCCGCATCGGAAGGGAGTTCTCTCCTGGTTCCTCGACAAAAGTACTGTGAATCCCTAAACAAAACAGTCAGGAGGAAAACACGGACAGTGATGGTTGGAAATGTTGCCCTTGGTAGTGAGCATCCCATAAGGATTCAAACAATGACAACAACTGATACAAAAGATGTTGCTGGAACAGTTGAACAGGTCATGAAAATAGCTGACAAGGGAGCCAATCTTGTGCGGATAACAGTTCAGGGGAAGAAAGAAGCAGATGCATGTTTTGAAATCAAGAACACCCTTGTGCAGAAAAATTATAATATACCTCTGGTCGCAGATATTCACTTTGCTCCTCCCATTGCATTGAGAGTTGCCGAGTGCTTCGATAAAATTCGTGTAAACCCTGGAAATTTTGCTGATAGGCGGGCTCAATTTGAAAAGCTAGAGTACACTGAGGATGATTATCAAAAAGAACTTGAGCATATTGAGGAGGTTTTTACTCCGTTGGTTGAGAAATGTAAGAAGTATGGAAGAGCAATTCGCATTGGAACAAATCATGGGAGCCTTTCAGATCGTATAATGAGCTACTTTGGCGATTCTCCAAGGGGAATGGTTGAATCGGCATTTGAGTTTGCAAGAATATGCCGAAAGTTGGACTTCCATAATTTTGTCTTTTCCATGAAAGCAAGCAATCCAGTAATTATGGTTCAGGCATATCGTTTGCTTGTATCTGAATTGTATGTCAAAGGCTGGGATTATCCATTACACCTTGGAGTTACTGAAGCCGGAGAAGGTGAGGATGGACGAATGAAGTCTGCCATTGGCATTGGGACCCTTCTTCAGGATGGCTTGGGTGATACTATTAGAGTTTCTCTAACAGAACAACCCGAGGAGGAGATAGATCCATGCAGAAGGCTGGCAACCCTTGGTATGAGAGCAGCTGAACTTCAGCAAGGAGTGCGTCGATCTGGCCAGTTGCCCATGCAAAAGGAGGGTGAGGAGGTGGATTATAGAGGTGTCTTGCACCGTGATGGCTCTGTTCTCATGTCGGTTTCCTTGGATCAATTGAAGGTGCCAGAACTTCTGTACAAATCTCTTGCAGCAAAGCTTGTTGTTGGCATGCCGTTTAGGGATCTAGCCACAGTGGATTCAATCTTACTGAGAGAGCTTCCTACAGTAGATGATGCTAATGGTCGTCTGGCTCTCAAAAGGCTGATAGACATAAGTATAGGTGTCATAACTCCTTTATCTGAGCAACTTACAAAGCCATTGCCGAATGCCATGGTTCTGGTCAGTCTGAAGGAGTTGTCCTCTGGTGCTCACAAACTTTTACCTGAAGGCACACGGTTGGTTGTTTCTGTACGAGGTGATGAATCATACAATGATCTGGAAATCTTGAAAGAAATTGATGCTACAATGCTTTTCCATGATTTACCATATTCAGAAGACAAAGTCAGCAGAGTGCACGCTGCAAGGAGGTTATTTGAGTATCTATCAGAGAATGCTCTTAGCTTCCCTGTGATTCATCACATTCAGTTTCCAGAGGGAATTCACAGAGACGACTTGGTTATTGGTGCTGGTTCCAATGCGGGATCCCTTTTGGTCGATGGCCTCGGAGACGGTGTCCTGTTAGAAGCCCCAGATAAGGATTTCGATTTCGTAAGGAATGCATCCTTCAATTTGCTACAGGGTTGCAGAATGAGGAATACGAAGACCGAGTATGTTTCATGCCCATCTTGTGGCAGAACATTGTTTGATCTTCAAGAAATAAGTGCTGAAATTCGGGAAAGGACATCTCATCTTCCTGGAGTTTCCATTGCAATTATGGGTTGTATTGTAAACGGTCCTGGGGAGATGGCCGATGCTGACTTTGGGTACGTTGGGGGTTCTCCGGGAAAGATCGATCTTTATGTTGGGAAGACCGTGGTGAAGCGTGGAATTGCAATGGAGCATGCGACGGAGGCTCTAATCCAGCTAATGAAAGATCATGGCCGGTGGGTCGACCCTACGACAGAAGAATGA

Protein sequence

MTSVGTLPSHLSGLKGGNVNLGFANRLQLVKVSDLKSIRSPGRKVLVIRNSNPGPDIAELQPASEGSSLLVPRQKYCESLNKTVRRKTRTVMVGNVALGSEHPIRIQTMTTTDTKDVAGTVEQVMKIADKGANLVRITVQGKKEADACFEIKNTLVQKNYNIPLVADIHFAPPIALRVAECFDKIRVNPGNFADRRAQFEKLEYTEDDYQKELEHIEEVFTPLVEKCKKYGRAIRIGTNHGSLSDRIMSYFGDSPRGMVESAFEFARICRKLDFHNFVFSMKASNPVIMVQAYRLLVSELYVKGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEQPEEEIDPCRRLATLGMRAAELQQGVRRSGQLPMQKEGEEVDYRGVLHRDGSVLMSVSLDQLKVPELLYKSLAAKLVVGMPFRDLATVDSILLRELPTVDDANGRLALKRLIDISIGVITPLSEQLTKPLPNAMVLVSLKELSSGAHKLLPEGTRLVVSVRGDESYNDLEILKEIDATMLFHDLPYSEDKVSRVHAARRLFEYLSENALSFPVIHHIQFPEGIHRDDLVIGAGSNAGSLLVDGLGDGVLLEAPDKDFDFVRNASFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIRERTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGSPGKIDLYVGKTVVKRGIAMEHATEALIQLMKDHGRWVDPTTEE

Homology

[Close]

BLAST of Carg12322 vs. NCBI nr
Match: KAG7036879.1 (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin), chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1437.9 bits (3721), Expect = 0.0e+00
Identity = 727/727 (100.00%), Postives = 727/727 (100.00%), Query Frame = 0


Query: 1   MTSVGTLPSHLSGLKGGNVNLGFANRLQLVKVSDLKSIRSPGRKVLVIRNSNPGPDIAEL 60
           MTSVGTLPSHLSGLKGGNVNLGFANRLQLVKVSDLKSIRSPGRKVLVIRNSNPGPDIAEL
Sbjct: 1   MTSVGTLPSHLSGLKGGNVNLGFANRLQLVKVSDLKSIRSPGRKVLVIRNSNPGPDIAEL 60

Query: 61  QPASEGSSLLVPRQKYCESLNKTVRRKTRTVMVGNVALGSEHPIRIQTMTTTDTKDVAGT 120
           QPASEGSSLLVPRQKYCESLNKTVRRKTRTVMVGNVALGSEHPIRIQTMTTTDTKDVAGT
Sbjct: 61  QPASEGSSLLVPRQKYCESLNKTVRRKTRTVMVGNVALGSEHPIRIQTMTTTDTKDVAGT 120

Query: 121 VEQVMKIADKGANLVRITVQGKKEADACFEIKNTLVQKNYNIPLVADIHFAPPIALRVAE 180
           VEQVMKIADKGANLVRITVQGKKEADACFEIKNTLVQKNYNIPLVADIHFAPPIALRVAE
Sbjct: 121 VEQVMKIADKGANLVRITVQGKKEADACFEIKNTLVQKNYNIPLVADIHFAPPIALRVAE 180

Query: 181 CFDKIRVNPGNFADRRAQFEKLEYTEDDYQKELEHIEEVFTPLVEKCKKYGRAIRIGTNH 240
           CFDKIRVNPGNFADRRAQFEKLEYTEDDYQKELEHIEEVFTPLVEKCKKYGRAIRIGTNH
Sbjct: 181 CFDKIRVNPGNFADRRAQFEKLEYTEDDYQKELEHIEEVFTPLVEKCKKYGRAIRIGTNH 240

Query: 241 GSLSDRIMSYFGDSPRGMVESAFEFARICRKLDFHNFVFSMKASNPVIMVQAYRLLVSEL 300
           GSLSDRIMSYFGDSPRGMVESAFEFARICRKLDFHNFVFSMKASNPVIMVQAYRLLVSEL
Sbjct: 241 GSLSDRIMSYFGDSPRGMVESAFEFARICRKLDFHNFVFSMKASNPVIMVQAYRLLVSEL 300

Query: 301 YVKGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEQPEEEIDPCRRL 360
           YVKGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEQPEEEIDPCRRL
Sbjct: 301 YVKGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEQPEEEIDPCRRL 360

Query: 361 ATLGMRAAELQQGVRRSGQLPMQKEGEEVDYRGVLHRDGSVLMSVSLDQLKVPELLYKSL 420
           ATLGMRAAELQQGVRRSGQLPMQKEGEEVDYRGVLHRDGSVLMSVSLDQLKVPELLYKSL
Sbjct: 361 ATLGMRAAELQQGVRRSGQLPMQKEGEEVDYRGVLHRDGSVLMSVSLDQLKVPELLYKSL 420

Query: 421 AAKLVVGMPFRDLATVDSILLRELPTVDDANGRLALKRLIDISIGVITPLSEQLTKPLPN 480
           AAKLVVGMPFRDLATVDSILLRELPTVDDANGRLALKRLIDISIGVITPLSEQLTKPLPN
Sbjct: 421 AAKLVVGMPFRDLATVDSILLRELPTVDDANGRLALKRLIDISIGVITPLSEQLTKPLPN 480

Query: 481 AMVLVSLKELSSGAHKLLPEGTRLVVSVRGDESYNDLEILKEIDATMLFHDLPYSEDKVS 540
           AMVLVSLKELSSGAHKLLPEGTRLVVSVRGDESYNDLEILKEIDATMLFHDLPYSEDKVS
Sbjct: 481 AMVLVSLKELSSGAHKLLPEGTRLVVSVRGDESYNDLEILKEIDATMLFHDLPYSEDKVS 540

Query: 541 RVHAARRLFEYLSENALSFPVIHHIQFPEGIHRDDLVIGAGSNAGSLLVDGLGDGVLLEA 600
           RVHAARRLFEYLSENALSFPVIHHIQFPEGIHRDDLVIGAGSNAGSLLVDGLGDGVLLEA
Sbjct: 541 RVHAARRLFEYLSENALSFPVIHHIQFPEGIHRDDLVIGAGSNAGSLLVDGLGDGVLLEA 600

Query: 601 PDKDFDFVRNASFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIRERTSHLPGVSI 660
           PDKDFDFVRNASFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIRERTSHLPGVSI
Sbjct: 601 PDKDFDFVRNASFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIRERTSHLPGVSI 660

Query: 661 AIMGCIVNGPGEMADADFGYVGGSPGKIDLYVGKTVVKRGIAMEHATEALIQLMKDHGRW 720
           AIMGCIVNGPGEMADADFGYVGGSPGKIDLYVGKTVVKRGIAMEHATEALIQLMKDHGRW
Sbjct: 661 AIMGCIVNGPGEMADADFGYVGGSPGKIDLYVGKTVVKRGIAMEHATEALIQLMKDHGRW 720

Query: 721 VDPTTEE 728
           VDPTTEE
Sbjct: 721 VDPTTEE 727

[Close]

BLAST of Carg12322 vs. NCBI nr
Match: XP_022948271.1 (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin), chloroplastic isoform X1 [Cucurbita moschata] >KAG6607190.1 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin), chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1428.3 bits (3696), Expect = 0.0e+00
Identity = 727/741 (98.11%), Postives = 727/741 (98.11%), Query Frame = 0


Query: 1   MTSVGTLPSHLSGLKGGNVNLGFANRLQLVKVSDLKSIRSPGRKVLVIRNSNPGPDIAEL 60
           MTSVGTLPSHLSGLKGGNVNLGFANRLQLVKVSDLKSIRSPGRKVLVIRNSNPGPDIAEL
Sbjct: 1   MTSVGTLPSHLSGLKGGNVNLGFANRLQLVKVSDLKSIRSPGRKVLVIRNSNPGPDIAEL 60

Query: 61  QPASEGSSLLVPRQKYCESLNKTVRRKTRTVMVGNVALGSEHPIRIQTMTTTDTKDVAGT 120
           QPASEGSSLLVPRQKYCESLNKTVRRKTRTVMVGNVALGSEHPIRIQTMTTTDTKDVAGT
Sbjct: 61  QPASEGSSLLVPRQKYCESLNKTVRRKTRTVMVGNVALGSEHPIRIQTMTTTDTKDVAGT 120

Query: 121 VEQVMKIADKGANLVRITVQGKKEADACFEIKNTLVQKNYNIPLVADIHFAPPIALRVAE 180
           VEQVMKIADKGANLVRITVQGKKEADACFEIKNTLVQKNYNIPLVADIHFAPPIALRVAE
Sbjct: 121 VEQVMKIADKGANLVRITVQGKKEADACFEIKNTLVQKNYNIPLVADIHFAPPIALRVAE 180

Query: 181 CFDKIRVNPGNFADRRAQFEKLEYTEDDYQKELEHIEEVFTPLVEKCKKYGRAIRIGTNH 240
           CFDKIRVNPGNFADRRAQFEKLEYTEDDYQKELEHIEEVFTPLVEKCKKYGRAIRIGTNH
Sbjct: 181 CFDKIRVNPGNFADRRAQFEKLEYTEDDYQKELEHIEEVFTPLVEKCKKYGRAIRIGTNH 240

Query: 241 GSLSDRIMSYFGDSPRGMVESAFEFARICRKLDFHNFVFSMKASNPVIMVQAYRLLVSEL 300
           GSLSDRIMSYFGDSPRGMVESAFEFARICRKLDFHNFVFSMKASNPVIMVQAYRLLVSEL
Sbjct: 241 GSLSDRIMSYFGDSPRGMVESAFEFARICRKLDFHNFVFSMKASNPVIMVQAYRLLVSEL 300

Query: 301 YVKGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEQPEEEIDPCRRL 360
           YVKGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEQPEEEIDPCRRL
Sbjct: 301 YVKGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEQPEEEIDPCRRL 360

Query: 361 ATLGMRAAELQQGV--------------RRSGQLPMQKEGEEVDYRGVLHRDGSVLMSVS 420
           ATLGMRAAELQQGV              RRSGQLPMQKEGEEVDYRGVLHRDGSVLMSVS
Sbjct: 361 ATLGMRAAELQQGVVPFEEKHRHYFTFQRRSGQLPMQKEGEEVDYRGVLHRDGSVLMSVS 420

Query: 421 LDQLKVPELLYKSLAAKLVVGMPFRDLATVDSILLRELPTVDDANGRLALKRLIDISIGV 480
           LDQLKVPELLYKSLAAKLVVGMPFRDLATVDSILLRELPTVDDANGRLALKRLIDISIGV
Sbjct: 421 LDQLKVPELLYKSLAAKLVVGMPFRDLATVDSILLRELPTVDDANGRLALKRLIDISIGV 480

Query: 481 ITPLSEQLTKPLPNAMVLVSLKELSSGAHKLLPEGTRLVVSVRGDESYNDLEILKEIDAT 540
           ITPLSEQLTKPLPNAMVLVSLKELSSGAHKLLPEGTRLVVSVRGDESYNDLEILKEIDAT
Sbjct: 481 ITPLSEQLTKPLPNAMVLVSLKELSSGAHKLLPEGTRLVVSVRGDESYNDLEILKEIDAT 540

Query: 541 MLFHDLPYSEDKVSRVHAARRLFEYLSENALSFPVIHHIQFPEGIHRDDLVIGAGSNAGS 600
           MLFHDLPYSEDKVSRVHAARRLFEYLSENALSFPVIHHIQFPEGIHRDDLVIGAGSNAGS
Sbjct: 541 MLFHDLPYSEDKVSRVHAARRLFEYLSENALSFPVIHHIQFPEGIHRDDLVIGAGSNAGS 600

Query: 601 LLVDGLGDGVLLEAPDKDFDFVRNASFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISA 660
           LLVDGLGDGVLLEAPDKDFDFVRNASFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISA
Sbjct: 601 LLVDGLGDGVLLEAPDKDFDFVRNASFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISA 660

Query: 661 EIRERTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGSPGKIDLYVGKTVVKRGIAMEHA 720
           EIRERTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGSPGKIDLYVGKTVVKRGIAMEHA
Sbjct: 661 EIRERTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGSPGKIDLYVGKTVVKRGIAMEHA 720

Query: 721 TEALIQLMKDHGRWVDPTTEE 728
           TEALIQLMKDHGRWVDPTTEE
Sbjct: 721 TEALIQLMKDHGRWVDPTTEE 741

[Close]

BLAST of Carg12322 vs. NCBI nr
Match: XP_022998940.1 (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin), chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 1422.9 bits (3682), Expect = 0.0e+00
Identity = 723/741 (97.57%), Postives = 727/741 (98.11%), Query Frame = 0


Query: 1   MTSVGTLPSHLSGLKGGNVNLGFANRLQLVKVSDLKSIRSPGRKVLVIRNSNPGPDIAEL 60
           MTSVGTLPSHLSGL+GGNVNLGFANRLQLVKVSDLKSIRSPGRKVLVIRNSNPGPDIAEL
Sbjct: 1   MTSVGTLPSHLSGLRGGNVNLGFANRLQLVKVSDLKSIRSPGRKVLVIRNSNPGPDIAEL 60

Query: 61  QPASEGSSLLVPRQKYCESLNKTVRRKTRTVMVGNVALGSEHPIRIQTMTTTDTKDVAGT 120
           QPASEGSSLLVPRQKYCESLNKTVRRKTRTVMVGNVALGSEHPIRIQTMTTTDTKDVAGT
Sbjct: 61  QPASEGSSLLVPRQKYCESLNKTVRRKTRTVMVGNVALGSEHPIRIQTMTTTDTKDVAGT 120

Query: 121 VEQVMKIADKGANLVRITVQGKKEADACFEIKNTLVQKNYNIPLVADIHFAPPIALRVAE 180
           VEQVMKIADKGANLVRITVQGKKEADACFEIKNTLVQKNYNIPLVADIHFAPPIALRVAE
Sbjct: 121 VEQVMKIADKGANLVRITVQGKKEADACFEIKNTLVQKNYNIPLVADIHFAPPIALRVAE 180

Query: 181 CFDKIRVNPGNFADRRAQFEKLEYTEDDYQKELEHIEEVFTPLVEKCKKYGRAIRIGTNH 240
           CFDKIRVNPGNFADRRAQFEKLEYTEDDYQKELEHIEEVFTPLVEKCKKYGRAIRIGTNH
Sbjct: 181 CFDKIRVNPGNFADRRAQFEKLEYTEDDYQKELEHIEEVFTPLVEKCKKYGRAIRIGTNH 240

Query: 241 GSLSDRIMSYFGDSPRGMVESAFEFARICRKLDFHNFVFSMKASNPVIMVQAYRLLVSEL 300
           GSLSDRIMSYFGDSPRGMVESAFEFARICRKLDFHNFVFSMKASNPVIMVQAYRLLVSEL
Sbjct: 241 GSLSDRIMSYFGDSPRGMVESAFEFARICRKLDFHNFVFSMKASNPVIMVQAYRLLVSEL 300

Query: 301 YVKGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEQPEEEIDPCRRL 360
           YV+GWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEQPEEEIDPCRRL
Sbjct: 301 YVQGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEQPEEEIDPCRRL 360

Query: 361 ATLGMRAAELQQGV--------------RRSGQLPMQKEGEEVDYRGVLHRDGSVLMSVS 420
           ATLGMRAAELQQGV              RRSGQLPMQKEGEEVDYRGVLHRDGSVLMSVS
Sbjct: 361 ATLGMRAAELQQGVVPFEEKHRHYFTFQRRSGQLPMQKEGEEVDYRGVLHRDGSVLMSVS 420

Query: 421 LDQLKVPELLYKSLAAKLVVGMPFRDLATVDSILLRELPTVDDANGRLALKRLIDISIGV 480
           LDQLKVPELLYKSLAAKLVVGMPFRDLATVDSILLRELPTVDDANGRLALKRLIDISIGV
Sbjct: 421 LDQLKVPELLYKSLAAKLVVGMPFRDLATVDSILLRELPTVDDANGRLALKRLIDISIGV 480

Query: 481 ITPLSEQLTKPLPNAMVLVSLKELSSGAHKLLPEGTRLVVSVRGDESYNDLEILKEIDAT 540
           ITPLSEQLTKPLPNAMVLVSLKELSSGAHKLLPEGTRLVVSVRGDESYNDLEILKEIDAT
Sbjct: 481 ITPLSEQLTKPLPNAMVLVSLKELSSGAHKLLPEGTRLVVSVRGDESYNDLEILKEIDAT 540

Query: 541 MLFHDLPYSEDKVSRVHAARRLFEYLSENALSFPVIHHIQFPEGIHRDDLVIGAGSNAGS 600
           MLFHDLPYSEDKVSRVHAARRLFEYLSENALSFPVIHHIQFP+GIHRDDLVIGAGSNAGS
Sbjct: 541 MLFHDLPYSEDKVSRVHAARRLFEYLSENALSFPVIHHIQFPKGIHRDDLVIGAGSNAGS 600

Query: 601 LLVDGLGDGVLLEAPDKDFDFVRNASFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISA 660
           LLVDGLGDGVLLEAPDKDFDFVRNASFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISA
Sbjct: 601 LLVDGLGDGVLLEAPDKDFDFVRNASFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISA 660

Query: 661 EIRERTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGSPGKIDLYVGKTVVKRGIAMEHA 720
           EIRE+TSHLPGVSIAIMGCIVNGPGEMADADFGYVGGSPGKIDLYVGKTVVKRGIAMEHA
Sbjct: 661 EIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGSPGKIDLYVGKTVVKRGIAMEHA 720

Query: 721 TEALIQLMKDHGRWVDPTTEE 728
           TEALIQLMKDHGRWVDPTTEE
Sbjct: 721 TEALIQLMKDHGRWVDPTTEE 741

[Close]

BLAST of Carg12322 vs. NCBI nr
Match: XP_023522367.1 (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin), chloroplastic [Cucurbita pepo subsp. pepo] >XP_023523655.1 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin), chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1414.4 bits (3660), Expect = 0.0e+00
Identity = 720/741 (97.17%), Postives = 723/741 (97.57%), Query Frame = 0


Query: 1   MTSVGTLPSHLSGLKGGNVNLGFANRLQLVKVSDLKSIRSPGRKVLVIRNSNPGPDIAEL 60
           MTSVGTLPSHLSGLKGGNVNLGFA RLQLVKVSDLKSIRSPGRKVLVIRNSN GPDIAEL
Sbjct: 1   MTSVGTLPSHLSGLKGGNVNLGFAKRLQLVKVSDLKSIRSPGRKVLVIRNSNSGPDIAEL 60

Query: 61  QPASEGSSLLVPRQKYCESLNKTVRRKTRTVMVGNVALGSEHPIRIQTMTTTDTKDVAGT 120
           QPASEGSSLLVPRQKYCESLNKTVRRKTRTVMVGNVALGSEHPIRIQTMTTTDTKDVAGT
Sbjct: 61  QPASEGSSLLVPRQKYCESLNKTVRRKTRTVMVGNVALGSEHPIRIQTMTTTDTKDVAGT 120

Query: 121 VEQVMKIADKGANLVRITVQGKKEADACFEIKNTLVQKNYNIPLVADIHFAPPIALRVAE 180
           VEQVMKIADKGANLVRITVQGKKEADACFEIKNTLVQKNYNIPLVADIHFAPPIALRVAE
Sbjct: 121 VEQVMKIADKGANLVRITVQGKKEADACFEIKNTLVQKNYNIPLVADIHFAPPIALRVAE 180

Query: 181 CFDKIRVNPGNFADRRAQFEKLEYTEDDYQKELEHIEEVFTPLVEKCKKYGRAIRIGTNH 240
           CFDKIRVNPGNFADRRAQFEKLEYTEDDYQKELEHIEEVFTPLVEKCKKYGRAIRIGTNH
Sbjct: 181 CFDKIRVNPGNFADRRAQFEKLEYTEDDYQKELEHIEEVFTPLVEKCKKYGRAIRIGTNH 240

Query: 241 GSLSDRIMSYFGDSPRGMVESAFEFARICRKLDFHNFVFSMKASNPVIMVQAYRLLVSEL 300
           GSLSDRIMSYFGDSPRGMVESAFEFARICRKLDFHNFVFSMKASNPVIMVQAYRLLVSEL
Sbjct: 241 GSLSDRIMSYFGDSPRGMVESAFEFARICRKLDFHNFVFSMKASNPVIMVQAYRLLVSEL 300

Query: 301 YVKGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEQPEEEIDPCRRL 360
           YV+GWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEQPEEEIDPCRRL
Sbjct: 301 YVQGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEQPEEEIDPCRRL 360

Query: 361 ATLGMRAAELQQGV--------------RRSGQLPMQKEGEEVDYRGVLHRDGSVLMSVS 420
           ATLGMRAAELQQGV              RRSGQLPMQKEGEEVDYRGVLHRDGSVLMSVS
Sbjct: 361 ATLGMRAAELQQGVVPFEEKHRHYFTFQRRSGQLPMQKEGEEVDYRGVLHRDGSVLMSVS 420

Query: 421 LDQLKVPELLYKSLAAKLVVGMPFRDLATVDSILLRELPTVDDANGRLALKRLIDISIGV 480
           LDQLKVPELLYKSLAAKLVVGMPFRDLATVDSILLRELPTVDDANGRLALKRLIDISIGV
Sbjct: 421 LDQLKVPELLYKSLAAKLVVGMPFRDLATVDSILLRELPTVDDANGRLALKRLIDISIGV 480

Query: 481 ITPLSEQLTKPLPNAMVLVSLKELSSGAHKLLPEGTRLVVSVRGDESYNDLEILKEIDAT 540
           ITPLSEQLTKPLPNAMVLVSLKELS+GAHKLLPEGTRLVVSVRGDE YNDLEILKEIDAT
Sbjct: 481 ITPLSEQLTKPLPNAMVLVSLKELSTGAHKLLPEGTRLVVSVRGDEPYNDLEILKEIDAT 540

Query: 541 MLFHDLPYSEDKVSRVHAARRLFEYLSENALSFPVIHHIQFPEGIHRDDLVIGAGSNAGS 600
           MLFHDLPYSEDKVSRVHAARRLFEYLSENALSFPVIHHIQFP+GIHRDDLVIGAGSNAGS
Sbjct: 541 MLFHDLPYSEDKVSRVHAARRLFEYLSENALSFPVIHHIQFPKGIHRDDLVIGAGSNAGS 600

Query: 601 LLVDGLGDGVLLEAPDKDFDFVRNASFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISA 660
           LLVDGLGDGVLLEAPDKDFDFVRNASFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISA
Sbjct: 601 LLVDGLGDGVLLEAPDKDFDFVRNASFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISA 660

Query: 661 EIRERTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGSPGKIDLYVGKTVVKRGIAMEHA 720
           EIRERTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGSPGKIDLYVGKTVVKRGIAMEHA
Sbjct: 661 EIRERTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGSPGKIDLYVGKTVVKRGIAMEHA 720

Query: 721 TEALIQLMKDHGRWVDPTTEE 728
           TEALIQLMKDHGRWVDP TEE
Sbjct: 721 TEALIQLMKDHGRWVDPPTEE 741

[Close]

BLAST of Carg12322 vs. NCBI nr
Match: XP_038895330.1 (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin), chloroplastic [Benincasa hispida] >XP_038895331.1 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin), chloroplastic [Benincasa hispida])

HSP 1 Score: 1353.6 bits (3502), Expect = 0.0e+00
Identity = 677/741 (91.36%), Postives = 713/741 (96.22%), Query Frame = 0


Query: 1   MTSVGTLPSHLSGLKGGNVNLGFANRLQLVKVSDLKSIRSPGRKVLVIRNSNPGPDIAEL 60
           M S GTLPSHLSGLKGGNVNLGF+ RL+ VKV DL+S+RS GRKVLVIRNSNPG DIAEL
Sbjct: 1   MASAGTLPSHLSGLKGGNVNLGFSKRLESVKVFDLRSVRSHGRKVLVIRNSNPGSDIAEL 60

Query: 61  QPASEGSSLLVPRQKYCESLNKTVRRKTRTVMVGNVALGSEHPIRIQTMTTTDTKDVAGT 120
           QPASEGSSLLVPRQKYCES+NKTVRRKTRTVMVGNVALGSEHPIRIQTMTTTDTKDVAGT
Sbjct: 61  QPASEGSSLLVPRQKYCESINKTVRRKTRTVMVGNVALGSEHPIRIQTMTTTDTKDVAGT 120

Query: 121 VEQVMKIADKGANLVRITVQGKKEADACFEIKNTLVQKNYNIPLVADIHFAPPIALRVAE 180
           VEQVM+IADKGA++VRITVQGKKEADACFEIKNTLVQKNYNIPLVADIHFAP +ALRVAE
Sbjct: 121 VEQVMRIADKGADIVRITVQGKKEADACFEIKNTLVQKNYNIPLVADIHFAPSVALRVAE 180

Query: 181 CFDKIRVNPGNFADRRAQFEKLEYTEDDYQKELEHIEEVFTPLVEKCKKYGRAIRIGTNH 240
           CFDKIRVNPGNFADRRAQFEKLEYTE+DYQKELEHIEEVFTPLVEKCKKYGRA+RIGTNH
Sbjct: 181 CFDKIRVNPGNFADRRAQFEKLEYTEEDYQKELEHIEEVFTPLVEKCKKYGRAMRIGTNH 240

Query: 241 GSLSDRIMSYFGDSPRGMVESAFEFARICRKLDFHNFVFSMKASNPVIMVQAYRLLVSEL 300
           GSLSDRIMSYFGDSPRGMVESAFEFARICRKLD+HNFVFSMKASNPV+MVQAYRLLV+E+
Sbjct: 241 GSLSDRIMSYFGDSPRGMVESAFEFARICRKLDYHNFVFSMKASNPVVMVQAYRLLVAEM 300

Query: 301 YVKGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEQPEEEIDPCRRL 360
           YV+GWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTE PEEEIDPCRRL
Sbjct: 301 YVQGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEEEIDPCRRL 360

Query: 361 ATLGMRAAELQQGV--------------RRSGQLPMQKEGEEVDYRGVLHRDGSVLMSVS 420
           ATLGMRAAELQQGV              RRSGQLP+QKEGEEVDYRGVLHRDGSVLMSVS
Sbjct: 361 ATLGMRAAELQQGVVPYEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVS 420

Query: 421 LDQLKVPELLYKSLAAKLVVGMPFRDLATVDSILLRELPTVDDANGRLALKRLIDISIGV 480
           LDQLK+PELLYKSLAAKLVVGMPF+DLATVDSILLRELP+VDDA+ RLALKRLID+S+GV
Sbjct: 421 LDQLKMPELLYKSLAAKLVVGMPFKDLATVDSILLRELPSVDDADARLALKRLIDMSMGV 480

Query: 481 ITPLSEQLTKPLPNAMVLVSLKELSSGAHKLLPEGTRLVVSVRGDESYNDLEILKEIDAT 540
           ITPLSEQLTKPLPNAMVLV+LKELSSGAHKLLP+GTRLVVSVRGDESY+DL+ILKEIDAT
Sbjct: 481 ITPLSEQLTKPLPNAMVLVNLKELSSGAHKLLPDGTRLVVSVRGDESYDDLDILKEIDAT 540

Query: 541 MLFHDLPYSEDKVSRVHAARRLFEYLSENALSFPVIHHIQFPEGIHRDDLVIGAGSNAGS 600
           MLFHDLPYSEDKVSRVHAARRLFEYLSEN L+FPVIHHIQFP G+HRDDLVIGAGSNAG+
Sbjct: 541 MLFHDLPYSEDKVSRVHAARRLFEYLSENGLTFPVIHHIQFPNGVHRDDLVIGAGSNAGA 600

Query: 601 LLVDGLGDGVLLEAPDKDFDFVRNASFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISA 660
           LLVDGLGDGVLLEAPDKDFDF+RN SFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISA
Sbjct: 601 LLVDGLGDGVLLEAPDKDFDFIRNTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISA 660

Query: 661 EIRERTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGSPGKIDLYVGKTVVKRGIAMEHA 720
           EIRE+TSHLPGVSIAIMGCIVNGPGEMADADFGYVGGSPGKIDLYVGKTV+KRGIAME+A
Sbjct: 661 EIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGSPGKIDLYVGKTVLKRGIAMENA 720

Query: 721 TEALIQLMKDHGRWVDPTTEE 728
           TEALIQL+KDHGRWV+P TEE
Sbjct: 721 TEALIQLIKDHGRWVEPPTEE 741

[Close]

BLAST of Carg12322 vs. ExPASy Swiss-Prot
Match: F4K0E8 (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin), chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ISPG PE=1 SV=1)

HSP 1 Score: 1224.9 bits (3168), Expect = 0.0e+00
Identity = 607/735 (82.59%), Postives = 671/735 (91.29%), Query Frame = 0


Query: 3   SVGTLPSHLSGLKGGNVNLGFANRLQLVKVSDLKSIRSPGRKVLVIRNSNPGPDIAELQP 62
           + G LP+ +SG+K  +  +GF   + LV++ D++S+RS  R+V VIRNSN G D+AELQP
Sbjct: 2   ATGVLPAPVSGIKIPDSKVGFGKSMNLVRICDVRSLRSARRRVSVIRNSNQGSDLAELQP 61

Query: 63  ASEGSSLLVPRQKYCESLNKTVRRKTRTVMVGNVALGSEHPIRIQTMTTTDTKDVAGTVE 122
           ASEGS LLVPRQKYCESL+KTVRRKTRTVMVGNVALGSEHPIRIQTMTT+DTKD+ GTV+
Sbjct: 62  ASEGSPLLVPRQKYCESLHKTVRRKTRTVMVGNVALGSEHPIRIQTMTTSDTKDITGTVD 121

Query: 123 QVMKIADKGANLVRITVQGKKEADACFEIKNTLVQKNYNIPLVADIHFAPPIALRVAECF 182
           +VM+IADKGA++VRITVQGKKEADACFEIK+ LVQ NYNIPLVADIHFAP +ALRVAECF
Sbjct: 122 EVMRIADKGADIVRITVQGKKEADACFEIKDKLVQLNYNIPLVADIHFAPTVALRVAECF 181

Query: 183 DKIRVNPGNFADRRAQFEKLEYTEDDYQKELEHIEEVFTPLVEKCKKYGRAIRIGTNHGS 242
           DKIRVNPGNFADRRAQFE ++YTED+YQKEL+HIE+VFTPLVEKCKKYGRA+RIGTNHGS
Sbjct: 182 DKIRVNPGNFADRRAQFETIDYTEDEYQKELQHIEQVFTPLVEKCKKYGRAMRIGTNHGS 241

Query: 243 LSDRIMSYFGDSPRGMVESAFEFARICRKLDFHNFVFSMKASNPVIMVQAYRLLVSELYV 302
           LSDRIMSY+GDSPRGMVESAFEFARICRKLD+HNFVFSMKASNPVIMVQAYRLLV+E+YV
Sbjct: 242 LSDRIMSYYGDSPRGMVESAFEFARICRKLDYHNFVFSMKASNPVIMVQAYRLLVAEMYV 301

Query: 303 KGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEQPEEEIDPCRRLAT 362
            GWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTE PEEEIDPCRRLA 
Sbjct: 302 HGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEEEIDPCRRLAN 361

Query: 363 LGMRAAELQQGV--------------RRSGQLPMQKEGEEVDYRGVLHRDGSVLMSVSLD 422
           LG +AA+LQQGV              RR+G LP+QKEGEEVDYR VLHRDGSVLMS+SLD
Sbjct: 362 LGTKAAKLQQGVAPFEEKHRHYFDFQRRTGDLPVQKEGEEVDYRNVLHRDGSVLMSISLD 421

Query: 423 QLKVPELLYKSLAAKLVVGMPFRDLATVDSILLRELPTVDDANGRLALKRLIDISIGVIT 482
           QLK PELLY+SLA KLVVGMPF+DLATVDSILLRELP VDD   RLALKRLID+S+GVI 
Sbjct: 422 QLKAPELLYRSLATKLVVGMPFKDLATVDSILLRELPPVDDQVARLALKRLIDVSMGVIA 481

Query: 483 PLSEQLTKPLPNAMVLVSLKELSSGAHKLLPEGTRLVVSVRGDESYNDLEILKEIDATML 542
           PLSEQLTKPLPNAMVLV+LKELS GA+KLLPEGTRLVVS+RGDE Y +LEILK IDATM+
Sbjct: 482 PLSEQLTKPLPNAMVLVNLKELSGGAYKLLPEGTRLVVSLRGDEPYEELEILKNIDATMI 541

Query: 543 FHDLPYSEDKVSRVHAARRLFEYLSENALSFPVIHHIQFPEGIHRDDLVIGAGSNAGSLL 602
            HD+P++EDKVSRVHAARRLFE+LSEN+++FPVIHHI FP GIHRD+LVI AG+ AG LL
Sbjct: 542 LHDVPFTEDKVSRVHAARRLFEFLSENSVNFPVIHHINFPTGIHRDELVIHAGTYAGGLL 601

Query: 603 VDGLGDGVLLEAPDKDFDFVRNASFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEI 662
           VDGLGDGV+LEAPD+DFDF+RN SFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEI
Sbjct: 602 VDGLGDGVMLEAPDQDFDFLRNTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEI 661

Query: 663 RERTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGSPGKIDLYVGKTVVKRGIAMEHATE 722
           RE+TSHLPGVSIAIMGCIVNGPGEMADADFGYVGGSPGKIDLYVGKTVVKRGIAM  AT+
Sbjct: 662 REKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGSPGKIDLYVGKTVVKRGIAMTEATD 721

Query: 723 ALIQLMKDHGRWVDP 724
           ALI L+K+HGRWVDP
Sbjct: 722 ALIGLIKEHGRWVDP 736

[Close]

BLAST of Carg12322 vs. ExPASy Swiss-Prot
Match: Q6K8J4 (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin), chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=ISPG PE=2 SV=1)

HSP 1 Score: 1166.4 bits (3016), Expect = 0.0e+00
Identity = 583/743 (78.47%), Postives = 655/743 (88.16%), Query Frame = 0


Query: 3   SVGTLPSHLSGLKGGNVNLGFANRLQLVKVSDLKS---IRSPGRKVLVIRNSNPGPDIAE 62
           + G  P+ L  ++  +  +GF   +   K+  + +   + S   +VLV ++S+ G D  E
Sbjct: 2   ATGVAPAPLPHVRVRDGGIGFTRSVDFAKILSVPATLRVGSSRGRVLVAKSSSTGSDTME 61

Query: 63  LQPASEGSSLLVPRQKYCESLNKTVRRKTRTVMVGNVALGSEHPIRIQTMTTTDTKDVAG 122
           L+P+SEGS LLVPRQKYCES+ +T RRKTRTVMVGNV LGS+HPIRIQTMTT+DTKDVA 
Sbjct: 62  LEPSSEGSPLLVPRQKYCESIYETRRRKTRTVMVGNVPLGSDHPIRIQTMTTSDTKDVAK 121

Query: 123 TVEQVMKIADKGANLVRITVQGKKEADACFEIKNTLVQKNYNIPLVADIHFAPPIALRVA 182
           TVE+VM+IADKGA+ VRITVQG+KEADACFEIKNTLVQKNYNIPLVADIHFAP +ALRVA
Sbjct: 122 TVEEVMRIADKGADFVRITVQGRKEADACFEIKNTLVQKNYNIPLVADIHFAPTVALRVA 181

Query: 183 ECFDKIRVNPGNFADRRAQFEKLEYTEDDYQKELEHIEEVFTPLVEKCKKYGRAIRIGTN 242
           ECFDKIRVNPGNFADRRAQFE+LEYTEDDYQKELEHIE+VF+PLVEKCK+YGRA+RIGTN
Sbjct: 182 ECFDKIRVNPGNFADRRAQFEQLEYTEDDYQKELEHIEKVFSPLVEKCKQYGRAMRIGTN 241

Query: 243 HGSLSDRIMSYFGDSPRGMVESAFEFARICRKLDFHNFVFSMKASNPVIMVQAYRLLVSE 302
           HGSLSDRIMSY+GDSPRGMVESA EFARICRKLDFHNFVFSMKASNPVIMVQAYRLLV+E
Sbjct: 242 HGSLSDRIMSYYGDSPRGMVESALEFARICRKLDFHNFVFSMKASNPVIMVQAYRLLVAE 301

Query: 303 LYVKGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEQPEEEIDPCRR 362
           +Y  GWDYPLHLGVTEAGEGEDGRMKSAIGIGTLL DGLGDTIRVSLTE PEEEIDPCRR
Sbjct: 302 MYNLGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLMDGLGDTIRVSLTEPPEEEIDPCRR 361

Query: 363 LATLGMRAAELQQGV--------------RRSGQLPMQKEGEEVDYRGVLHRDGSVLMSV 422
           LA LG  AA+LQ GV              RRSGQLP+QKEGEEVDYRGVLHRDGSVLMSV
Sbjct: 362 LANLGTHAADLQIGVAPFEEKHRRYFDFQRRSGQLPLQKEGEEVDYRGVLHRDGSVLMSV 421

Query: 423 SLDQLKVPELLYKSLAAKLVVGMPFRDLATVDSILLRELPTVDDANGRLALKRLIDISIG 482
           SLDQLK PELLY+SLAAKLVVGMPF+DLATVDSILLRELP V+DA  RLALKRL+DIS+G
Sbjct: 422 SLDQLKAPELLYRSLAAKLVVGMPFKDLATVDSILLRELPPVEDAQARLALKRLVDISMG 481

Query: 483 VITPLSEQLTKPLPNAMVLVSLKELSSGAHKLLPEGTRLVVSVRGDESYNDLEILKEI-D 542
           V+TPLSEQLTKPLP+A+ LV++ ELSSGAHKLLPEGTRL V++RGDESY  L++LK + D
Sbjct: 482 VLTPLSEQLTKPLPHAIALVNVDELSSGAHKLLPEGTRLAVTLRGDESYEQLDLLKGVDD 541

Query: 543 ATMLFHDLPYSEDKVSRVHAARRLFEYLSENALSFPVIHHIQFPEGIHRDDLVIGAGSNA 602
            TML H +PY E+K  RVHAARRLFEYL  N L+FPVIHHI+FP+ ++RDDLVIGAG+N 
Sbjct: 542 ITMLLHSVPYGEEKTGRVHAARRLFEYLETNGLNFPVIHHIEFPKSVNRDDLVIGAGANV 601

Query: 603 GSLLVDGLGDGVLLEAPDKDFDFVRNASFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEI 662
           G+LLVDGLGDGVLLEA D++F+F+R+ SFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQE+
Sbjct: 602 GALLVDGLGDGVLLEAADQEFEFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEV 661

Query: 663 SAEIRERTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGSPGKIDLYVGKTVVKRGIAME 722
           SA+IRE+TSHLPGVSIAIMGCIVNGPGEMADADFGYVGG+PGKIDLYVGKTVV+RGIAME
Sbjct: 662 SAQIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVQRGIAME 721

Query: 723 HATEALIQLMKDHGRWVDPTTEE 728
            AT+ALIQL+KDHGRWVDP  EE
Sbjct: 722 GATDALIQLIKDHGRWVDPPVEE 744

[Close]

BLAST of Carg12322 vs. ExPASy Swiss-Prot
Match: Q6MD85 (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) OS=Protochlamydia amoebophila (strain UWE25) OX=264201 GN=ispG PE=3 SV=1)

HSP 1 Score: 639.0 bits (1647), Expect = 6.4e-182
Identity = 339/667 (50.82%), Postives = 453/667 (67.92%), Query Frame = 0


Query: 73  RQKYCESLNKTVRRKTRTVMVGNVALGSEHPIRIQTMTTTDTKDVAGTVEQVMKIADKGA 132
           ++KYCE++++T RR TR V VGNV +G  HPIRIQ+MTT+ T+DV  T+EQV+++AD+G 
Sbjct: 3   QKKYCEAIHQTERRPTRIVNVGNVGIGGNHPIRIQSMTTSSTRDVEATIEQVIRLADQGC 62

Query: 133 NLVRITVQGKKEADACFEIKNTLVQKNYNIPLVADIHFAPPIALRVAECFDKIRVNPGNF 192
            +VR+TVQG KEADAC  IK  L+++ Y IPLVADIHF PP A+RV +  DK+R+NPGNF
Sbjct: 63  EIVRVTVQGIKEADACEHIKKGLIKRGYQIPLVADIHFYPPAAMRVVDFVDKVRINPGNF 122

Query: 193 ADRRAQFEKLEYTEDDYQKELEHIEEVFTPLVEKCKKYGRAIRIGTNHGSLSDRIMSYFG 252
            D+RA F+++ Y ++ Y +E+E IEE FTPLVEKCK+  RA+RIGTNHGSLSDRIM+ +G
Sbjct: 123 VDKRASFKQIVYDDESYAREIERIEEKFTPLVEKCKRLNRAMRIGTNHGSLSDRIMNRYG 182

Query: 253 DSPRGMVESAFEFARICRKLDFHNFVFSMKASNPVIMVQAYRLLVSELYVKGWDYPLHLG 312
           D+P GMVESA EFARICRK D+HNF+FSMKASNP +M+QAYRLL   +Y   WDYPLHLG
Sbjct: 183 DTPFGMVESALEFARICRKNDYHNFLFSMKASNPQVMIQAYRLLTQAMYALEWDYPLHLG 242

Query: 313 VTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEQPEEEIDPCRRLATLGMRAAELQQ 372
           VTEAGEGEDGR+KSA+GIG+LL DG+GDTIRVSLTE P  EI+PC+RL  L   +A  QQ
Sbjct: 243 VTEAGEGEDGRIKSAMGIGSLLIDGIGDTIRVSLTEDPWHEINPCQRLIKLA--SAYQQQ 302

Query: 373 GVRRSGQLPMQKEGEEVDYRGV-------LHRDGSVLMSVSLDQLKVPELLYKSLAAKLV 432
           GV  +  +   ++ E ++ R V       +HRDG+V +S+ ++ LK    LY+ +  +  
Sbjct: 303 GV--APFIENYRQIEAIERRQVHLSSTVPMHRDGTVFISLPINMLKEAS-LYQQIGCEGP 362

Query: 433 VGMPFRDLATVDSILLRELPTVDDANGRLALKRLIDISIGVITP-------LSEQLTKPL 492
            G P    AT D+++L+  P  D    R  L+ L D+ IG+ +        +   L K L
Sbjct: 363 FGKPKLKTATADNLVLKN-PNSDSEEKR-QLQILKDLGIGLFSKDPFEMSLVIHPLKKWL 422

Query: 493 PNAMVLVSLKELSSGAHKLLPEGTRLVVSVRGDESYNDLEILKEIDATMLFHDLPYSEDK 552
            +  V       SS   K    G  L++ +  +      E++       L   L      
Sbjct: 423 QSRAVDSFASRFSSSWAK--SAGQPLIIQITDETEKEWKEVIS------LKPQLIILSPS 482

Query: 553 VSRVHAARRLFEYLSENALSFPVIHHIQFPEGIHRDDLVIGAGSNAGSLLVDGLGDGVLL 612
            +R+H +R+ FE+L +N L++PVI  + F      +D ++ A    GSLL DGLG+GV L
Sbjct: 483 TNRLHYSRQFFEWLQQNQLNYPVI--LNFTYQGENEDTILLASMECGSLLCDGLGEGVWL 542

Query: 613 EAPDKDFDFVRNASFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIRERTSHLPGV 672
           E P  D  F+R  SF++LQ  R+R +KT+++SCPSCGRTLF+LQ+++  I+ RTSHLPGV
Sbjct: 543 EGP-YDILFLRQLSFSILQAARLRMSKTDFISCPSCGRTLFNLQDVTKRIQSRTSHLPGV 602

Query: 673 SIAIMGCIVNGPGEMADADFGYVGGSPGKIDLYVGKTVVKRGIAMEHATEALIQLMKDHG 726
            IAIMGCIVNGPGEMADADFGYVG  PGKIDLYVGK  V++ I    A + L+ L++ HG
Sbjct: 603 KIAIMGCIVNGPGEMADADFGYVGSKPGKIDLYVGKECVEKDIDFADADDRLVNLIRAHG 651

[Close]

BLAST of Carg12322 vs. ExPASy Swiss-Prot
Match: Q9PKY3 (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) OS=Chlamydia muridarum (strain MoPn / Nigg) OX=243161 GN=ispG PE=3 SV=1)

HSP 1 Score: 482.6 bits (1241), Expect = 7.6e-135
Identity = 281/655 (42.90%), Postives = 365/655 (55.73%), Query Frame = 0


Query: 80  LNKTVRRKTRTVMVGNVALGSEHPIRIQTMTTTDTKDVAGTVEQVMKIADKGANLVRITV 139
           L    RRKT +V VGN+ +GSEH I+IQ+MTTT T DV GTV Q+  + + G  +VR+TV
Sbjct: 6   LQNGFRRKTLSVKVGNLFVGSEHSIKIQSMTTTATTDVEGTVRQIYALQECGCEIVRVTV 65

Query: 140 QGKKEADACFEIKNTLVQKNYNIPLVADIHFAPPIALRVAECFDKIRVNPGNFADRRAQF 199
           QG KE  AC +IK+ LVQ+N  IPLVADIHF P  A+ VA+  DK+R+NPGN+ D+R  F
Sbjct: 66  QGLKEVGACEQIKDRLVQQNVTIPLVADIHFFPQAAIHVADFVDKVRINPGNYVDKRNMF 125

Query: 200 EKLEYTEDDYQKELEHIEEVFTPLVEKCKKYGRAIRIGTNHGSLSDRIMSYFGDSPRGMV 259
               Y+++ Y + LE + E F+PLV KCK+ GRA+RIG NHGSLS+RIM  +GD+  GMV
Sbjct: 126 SGKIYSDEQYTRSLERLFEKFSPLVAKCKRLGRAMRIGVNHGSLSERIMQRYGDTIEGMV 185

Query: 260 ESAFEFARICRKLDFHNFVFSMKASNPVIMVQAYRLLVSELYVKGWDYPLHLGVTEAGEG 319
            SA E+A +C  +D+HN VFSMK+SNP  MV AYR L  EL  + W YPLHLGVTEAG G
Sbjct: 186 FSALEYAEVCVNMDYHNIVFSMKSSNPRTMVAAYRALARELDQRKWLYPLHLGVTEAGSG 245

Query: 320 EDGRMKSAIGIGTLLQDGLGDTIRVSLTEQPEEEIDPCRRLATLGMRAAELQQGVRRSGQ 379
            DG +KS++GIGTLL +GLGDTIR SLT  P  EI  C                      
Sbjct: 246 MDGMIKSSVGIGTLLSEGLGDTIRCSLTGSPTLEIPVC---------------------- 305

Query: 380 LPMQKEGEEVDYRGVLHRDGSVLMSVSLDQLKVPELLYKSLAAKLVVGMPFRDLATVDSI 439
           L + KE  +       +    +  S  L     P+          +VG+    L T++  
Sbjct: 306 LDLLKETAKYSKSTKKYNPFEIYHSKQLTTQTTPKHFPVENVYGFLVGLTKDHLLTIEPN 365

Query: 440 LLRELPTVDDANGRLALKRLIDISIGVITPLSEQLTKPLPNAMVLVSLKELSSGAHKLLP 499
            L +   VD   G+                                  K+L+S    ++P
Sbjct: 366 TLLQCLGVDITTGK----------------------------------KDLTSPDGVVIP 425

Query: 500 EGTRLVVSVRGDESY------NDLEILKEIDATMLFHD----LPYSEDKVSRVHAARRLF 559
           +  R    V   E +       D  IL E++  +   D     P+   +V  ++ ARR F
Sbjct: 426 KSMRSSAIVSEIEKHLRIFYKEDAPILNEMNEELWLSDKTLATPFVYFEVESIYQARRFF 485

Query: 560 EYLSENALSFPVIHHIQFPEGIHRDDLVIGAGSNAGSLLVDGLGDGVLLEAPDKDFDFVR 619
             L +N  S PV         + ++   I      G+LL+DGLG  VL      D    R
Sbjct: 486 A-LRQN-YSQPVCLSFSLKANLSKNSAAIDLSIRLGALLLDGLGSCVLFNF--SDLKLAR 545

Query: 620 NASFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIRERTSHLP-GVSIAIMGCIVN 679
              F++LQ   +R+T  EY+SCP CGRTLFDL E+S  I+ERT HLP G+ IA+MGCIVN
Sbjct: 546 TLGFSILQSANIRSTTVEYISCPGCGRTLFDLPEVSQRIKERTKHLPGGLKIAVMGCIVN 600

Query: 680 GPGEMADADFGYVGGSPGKIDLYVGKTVVKRGIAMEHATEALIQLMKDHGRWVDP 724
           GPGEMADADFGYVG  PG IDLYV    VK  + ME+A E LIQL+K+HG W +P
Sbjct: 606 GPGEMADADFGYVGSKPGMIDLYVKHKCVKSYVPMENAEEELIQLLKEHGVWKEP 600

[Close]

BLAST of Carg12322 vs. ExPASy Swiss-Prot
Match: Q04UL2 (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain JB197) OX=355277 GN=ispG PE=3 SV=1)

HSP 1 Score: 468.8 bits (1205), Expect = 1.1e-130
Identity = 280/660 (42.42%), Postives = 393/660 (59.55%), Query Frame = 0


Query: 85  RRKTRTVMVGNVALGSEHPIRIQTMTTTDTKDVAGTVEQVMKIADKGANLVRITVQGKKE 144
           RR+TR V VG+V +G  +PI IQ+M  +DT D  GTV+Q++++   G  +VR TV  + +
Sbjct: 14  RRQTREVKVGDVKIGGNNPIVIQSMINSDTTDTKGTVKQILELERTGCEIVRFTVPSQVD 73

Query: 145 ADACFEIKNTLVQKNYNIPLVADIHFAPPIALRVAECFDKIRVNPGNFADRRAQFEKLEY 204
           AD    I+  L +    IPLVADIHF P +A++  E  +K+R+NPGNFAD++ +F   +Y
Sbjct: 74  ADNLPSIRQELKKAGSKIPLVADIHFTPSVAMKAVEYVEKVRINPGNFADKK-KFAVRDY 133

Query: 205 TEDDYQKELEHIEEVFTPLVEKCKKYGRAIRIGTNHGSLSDRIMSYFGDSPRGMVESAFE 264
           T+ +Y +ELE I   F+PLV +CK+ G ++RIGTNHGSLSDRIM+ +GD+P+GMVESA E
Sbjct: 134 TDSEYDEELERISATFSPLVLRCKELGVSMRIGTNHGSLSDRIMNRYGDTPQGMVESALE 193

Query: 265 FARICRKLDFHNFVFSMKASNPVIMVQAYRLLVSELYVKGWDYPLHLGVTEAGEGEDGRM 324
           F RI   L++++ V SMKASNP +MVQAYR+L S       DYPLHLGVTEAG+G+DGR+
Sbjct: 194 FIRIAESLNYYDIVVSMKASNPQVMVQAYRMLASRFNELKMDYPLHLGVTEAGDGKDGRI 253

Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEQPEEEIDPCRRLATLGMRAAELQQGVRRSGQL--PM 384
           KSAIGIG+LL+DGLGDTIRVSLTE P  EI   R LA    +     + VR   +   P 
Sbjct: 254 KSAIGIGSLLEDGLGDTIRVSLTEDPVLEIPVARLLAEKFNKRIVKPEPVRGYSEFRNPF 313

Query: 385 QKE---GEEVDYRGVLHRDGSVLMSVSLDQLKVPELLYKSLAAKLVVGMPFR---DLATV 444
             E     E+        +   +   ++   +       ++A     G  F    +   +
Sbjct: 314 TYERFYSSEIKVGTFEAGENHPVRVETVLPFENSNSFLANIAKLYQYGKSFSIEPESILI 373

Query: 445 DSILLRELPTVDDANGRLALKRLIDISIGVITPLSEQLTKPLPN--AMVLVSLKELSSGA 504
           DS    +L  + +A   L++   + I +G    L+E+L   L     +V     +   G 
Sbjct: 374 DSPSPDQLKEISEAAAALSIP--VGILLGKNVSLNEKLQNELRGFPKVVFDPFLQFQDGK 433

Query: 505 HKL--LPEG------TRLVVSVRGDESYNDL-EILKEIDATMLFHDLPYSEDKVSRVHAA 564
             L  L E       T +  S    ES+  L E L EI       ++ +S +    ++  
Sbjct: 434 KMLSFLQERQNAGLYTEIHTSGAKIESFKGLPETLSEIG----IKNVLFSIESKEILYDY 493

Query: 565 RRLFEYLSENALSFPVIHHIQFPEGIHRDDLVIGAGSNAGSLLVDGLGDGVLLEAPD-KD 624
           R+L   LS++   FP++ H  F    + ++ +  +    G LL+DG+GD + ++ P  KD
Sbjct: 494 RKLGSILSQH--EFPILLHGSFS---NPEEALYDSAIGIGGLLIDGIGDLIRIKTPKMKD 553

Query: 625 FDFVRNASFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIRERTSHLPGVSIAIMG 684
            + +   S++LLQG R+R TKTEY+SCPSCGRTLF+LQE +A I+ RT HL GV IA+MG
Sbjct: 554 IEEIFQLSYDLLQGTRLRLTKTEYISCPSCGRTLFNLQETTARIKSRTGHLKGVKIAVMG 613

Query: 685 CIVNGPGEMADADFGYVGGSPGKIDLYVGKTVVKRGIAMEHATEALIQLMKDHGRWVDPT 725
           CIVNGPGEMADADFGYVG  PGK+ LY GK +V + +  E A E L++L+K HG W D T
Sbjct: 614 CIVNGPGEMADADFGYVGAGPGKVHLYRGKEIVMKNVPSEVADEKLVELIKKHGLWQDVT 661

[Close]

BLAST of Carg12322 vs. ExPASy TrEMBL
Match: A0A6J1G8T7 (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (Ferredoxin), chloroplastic isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111451995 PE=3 SV=1)

HSP 1 Score: 1428.3 bits (3696), Expect = 0.0e+00
Identity = 727/741 (98.11%), Postives = 727/741 (98.11%), Query Frame = 0


Query: 1   MTSVGTLPSHLSGLKGGNVNLGFANRLQLVKVSDLKSIRSPGRKVLVIRNSNPGPDIAEL 60
           MTSVGTLPSHLSGLKGGNVNLGFANRLQLVKVSDLKSIRSPGRKVLVIRNSNPGPDIAEL
Sbjct: 1   MTSVGTLPSHLSGLKGGNVNLGFANRLQLVKVSDLKSIRSPGRKVLVIRNSNPGPDIAEL 60

Query: 61  QPASEGSSLLVPRQKYCESLNKTVRRKTRTVMVGNVALGSEHPIRIQTMTTTDTKDVAGT 120
           QPASEGSSLLVPRQKYCESLNKTVRRKTRTVMVGNVALGSEHPIRIQTMTTTDTKDVAGT
Sbjct: 61  QPASEGSSLLVPRQKYCESLNKTVRRKTRTVMVGNVALGSEHPIRIQTMTTTDTKDVAGT 120

Query: 121 VEQVMKIADKGANLVRITVQGKKEADACFEIKNTLVQKNYNIPLVADIHFAPPIALRVAE 180
           VEQVMKIADKGANLVRITVQGKKEADACFEIKNTLVQKNYNIPLVADIHFAPPIALRVAE
Sbjct: 121 VEQVMKIADKGANLVRITVQGKKEADACFEIKNTLVQKNYNIPLVADIHFAPPIALRVAE 180

Query: 181 CFDKIRVNPGNFADRRAQFEKLEYTEDDYQKELEHIEEVFTPLVEKCKKYGRAIRIGTNH 240
           CFDKIRVNPGNFADRRAQFEKLEYTEDDYQKELEHIEEVFTPLVEKCKKYGRAIRIGTNH
Sbjct: 181 CFDKIRVNPGNFADRRAQFEKLEYTEDDYQKELEHIEEVFTPLVEKCKKYGRAIRIGTNH 240

Query: 241 GSLSDRIMSYFGDSPRGMVESAFEFARICRKLDFHNFVFSMKASNPVIMVQAYRLLVSEL 300
           GSLSDRIMSYFGDSPRGMVESAFEFARICRKLDFHNFVFSMKASNPVIMVQAYRLLVSEL
Sbjct: 241 GSLSDRIMSYFGDSPRGMVESAFEFARICRKLDFHNFVFSMKASNPVIMVQAYRLLVSEL 300

Query: 301 YVKGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEQPEEEIDPCRRL 360
           YVKGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEQPEEEIDPCRRL
Sbjct: 301 YVKGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEQPEEEIDPCRRL 360

Query: 361 ATLGMRAAELQQGV--------------RRSGQLPMQKEGEEVDYRGVLHRDGSVLMSVS 420
           ATLGMRAAELQQGV              RRSGQLPMQKEGEEVDYRGVLHRDGSVLMSVS
Sbjct: 361 ATLGMRAAELQQGVVPFEEKHRHYFTFQRRSGQLPMQKEGEEVDYRGVLHRDGSVLMSVS 420

Query: 421 LDQLKVPELLYKSLAAKLVVGMPFRDLATVDSILLRELPTVDDANGRLALKRLIDISIGV 480
           LDQLKVPELLYKSLAAKLVVGMPFRDLATVDSILLRELPTVDDANGRLALKRLIDISIGV
Sbjct: 421 LDQLKVPELLYKSLAAKLVVGMPFRDLATVDSILLRELPTVDDANGRLALKRLIDISIGV 480

Query: 481 ITPLSEQLTKPLPNAMVLVSLKELSSGAHKLLPEGTRLVVSVRGDESYNDLEILKEIDAT 540
           ITPLSEQLTKPLPNAMVLVSLKELSSGAHKLLPEGTRLVVSVRGDESYNDLEILKEIDAT
Sbjct: 481 ITPLSEQLTKPLPNAMVLVSLKELSSGAHKLLPEGTRLVVSVRGDESYNDLEILKEIDAT 540

Query: 541 MLFHDLPYSEDKVSRVHAARRLFEYLSENALSFPVIHHIQFPEGIHRDDLVIGAGSNAGS 600
           MLFHDLPYSEDKVSRVHAARRLFEYLSENALSFPVIHHIQFPEGIHRDDLVIGAGSNAGS
Sbjct: 541 MLFHDLPYSEDKVSRVHAARRLFEYLSENALSFPVIHHIQFPEGIHRDDLVIGAGSNAGS 600

Query: 601 LLVDGLGDGVLLEAPDKDFDFVRNASFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISA 660
           LLVDGLGDGVLLEAPDKDFDFVRNASFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISA
Sbjct: 601 LLVDGLGDGVLLEAPDKDFDFVRNASFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISA 660

Query: 661 EIRERTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGSPGKIDLYVGKTVVKRGIAMEHA 720
           EIRERTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGSPGKIDLYVGKTVVKRGIAMEHA
Sbjct: 661 EIRERTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGSPGKIDLYVGKTVVKRGIAMEHA 720

Query: 721 TEALIQLMKDHGRWVDPTTEE 728
           TEALIQLMKDHGRWVDPTTEE
Sbjct: 721 TEALIQLMKDHGRWVDPTTEE 741

[Close]

BLAST of Carg12322 vs. ExPASy TrEMBL
Match: A0A6J1KDW7 (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (Ferredoxin), chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111493449 PE=3 SV=1)

HSP 1 Score: 1422.9 bits (3682), Expect = 0.0e+00
Identity = 723/741 (97.57%), Postives = 727/741 (98.11%), Query Frame = 0


Query: 1   MTSVGTLPSHLSGLKGGNVNLGFANRLQLVKVSDLKSIRSPGRKVLVIRNSNPGPDIAEL 60
           MTSVGTLPSHLSGL+GGNVNLGFANRLQLVKVSDLKSIRSPGRKVLVIRNSNPGPDIAEL
Sbjct: 1   MTSVGTLPSHLSGLRGGNVNLGFANRLQLVKVSDLKSIRSPGRKVLVIRNSNPGPDIAEL 60

Query: 61  QPASEGSSLLVPRQKYCESLNKTVRRKTRTVMVGNVALGSEHPIRIQTMTTTDTKDVAGT 120
           QPASEGSSLLVPRQKYCESLNKTVRRKTRTVMVGNVALGSEHPIRIQTMTTTDTKDVAGT
Sbjct: 61  QPASEGSSLLVPRQKYCESLNKTVRRKTRTVMVGNVALGSEHPIRIQTMTTTDTKDVAGT 120

Query: 121 VEQVMKIADKGANLVRITVQGKKEADACFEIKNTLVQKNYNIPLVADIHFAPPIALRVAE 180
           VEQVMKIADKGANLVRITVQGKKEADACFEIKNTLVQKNYNIPLVADIHFAPPIALRVAE
Sbjct: 121 VEQVMKIADKGANLVRITVQGKKEADACFEIKNTLVQKNYNIPLVADIHFAPPIALRVAE 180

Query: 181 CFDKIRVNPGNFADRRAQFEKLEYTEDDYQKELEHIEEVFTPLVEKCKKYGRAIRIGTNH 240
           CFDKIRVNPGNFADRRAQFEKLEYTEDDYQKELEHIEEVFTPLVEKCKKYGRAIRIGTNH
Sbjct: 181 CFDKIRVNPGNFADRRAQFEKLEYTEDDYQKELEHIEEVFTPLVEKCKKYGRAIRIGTNH 240

Query: 241 GSLSDRIMSYFGDSPRGMVESAFEFARICRKLDFHNFVFSMKASNPVIMVQAYRLLVSEL 300
           GSLSDRIMSYFGDSPRGMVESAFEFARICRKLDFHNFVFSMKASNPVIMVQAYRLLVSEL
Sbjct: 241 GSLSDRIMSYFGDSPRGMVESAFEFARICRKLDFHNFVFSMKASNPVIMVQAYRLLVSEL 300

Query: 301 YVKGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEQPEEEIDPCRRL 360
           YV+GWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEQPEEEIDPCRRL
Sbjct: 301 YVQGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEQPEEEIDPCRRL 360

Query: 361 ATLGMRAAELQQGV--------------RRSGQLPMQKEGEEVDYRGVLHRDGSVLMSVS 420
           ATLGMRAAELQQGV              RRSGQLPMQKEGEEVDYRGVLHRDGSVLMSVS
Sbjct: 361 ATLGMRAAELQQGVVPFEEKHRHYFTFQRRSGQLPMQKEGEEVDYRGVLHRDGSVLMSVS 420

Query: 421 LDQLKVPELLYKSLAAKLVVGMPFRDLATVDSILLRELPTVDDANGRLALKRLIDISIGV 480
           LDQLKVPELLYKSLAAKLVVGMPFRDLATVDSILLRELPTVDDANGRLALKRLIDISIGV
Sbjct: 421 LDQLKVPELLYKSLAAKLVVGMPFRDLATVDSILLRELPTVDDANGRLALKRLIDISIGV 480

Query: 481 ITPLSEQLTKPLPNAMVLVSLKELSSGAHKLLPEGTRLVVSVRGDESYNDLEILKEIDAT 540
           ITPLSEQLTKPLPNAMVLVSLKELSSGAHKLLPEGTRLVVSVRGDESYNDLEILKEIDAT
Sbjct: 481 ITPLSEQLTKPLPNAMVLVSLKELSSGAHKLLPEGTRLVVSVRGDESYNDLEILKEIDAT 540

Query: 541 MLFHDLPYSEDKVSRVHAARRLFEYLSENALSFPVIHHIQFPEGIHRDDLVIGAGSNAGS 600
           MLFHDLPYSEDKVSRVHAARRLFEYLSENALSFPVIHHIQFP+GIHRDDLVIGAGSNAGS
Sbjct: 541 MLFHDLPYSEDKVSRVHAARRLFEYLSENALSFPVIHHIQFPKGIHRDDLVIGAGSNAGS 600

Query: 601 LLVDGLGDGVLLEAPDKDFDFVRNASFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISA 660
           LLVDGLGDGVLLEAPDKDFDFVRNASFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISA
Sbjct: 601 LLVDGLGDGVLLEAPDKDFDFVRNASFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISA 660

Query: 661 EIRERTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGSPGKIDLYVGKTVVKRGIAMEHA 720
           EIRE+TSHLPGVSIAIMGCIVNGPGEMADADFGYVGGSPGKIDLYVGKTVVKRGIAMEHA
Sbjct: 661 EIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGSPGKIDLYVGKTVVKRGIAMEHA 720

Query: 721 TEALIQLMKDHGRWVDPTTEE 728
           TEALIQLMKDHGRWVDPTTEE
Sbjct: 721 TEALIQLMKDHGRWVDPTTEE 741

[Close]

BLAST of Carg12322 vs. ExPASy TrEMBL
Match: K7NBL1 (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Siraitia grosvenorii OX=190515 GN=HDS PE=2 SV=1)

HSP 1 Score: 1349.0 bits (3490), Expect = 0.0e+00
Identity = 675/739 (91.34%), Postives = 710/739 (96.08%), Query Frame = 0


Query: 3   SVGTLPSHLSGLKGGNVNLGFANRLQLVKVSDLKSIRSPGRKVLVIRNSNPGPDIAELQP 62
           + GTLPSHLSGLKGGNVNLGFA RL+LVKVSDLKS+RS GRKVLV+RNSNPG DIAELQP
Sbjct: 2   ATGTLPSHLSGLKGGNVNLGFAKRLELVKVSDLKSVRSRGRKVLVVRNSNPGSDIAELQP 61

Query: 63  ASEGSSLLVPRQKYCESLNKTVRRKTRTVMVGNVALGSEHPIRIQTMTTTDTKDVAGTVE 122
           ASEGSSLLVPRQKYCES NKTVRRKTRTVMVGNVALGSEHPIRIQTMTTTDTKDVAGTVE
Sbjct: 62  ASEGSSLLVPRQKYCESTNKTVRRKTRTVMVGNVALGSEHPIRIQTMTTTDTKDVAGTVE 121

Query: 123 QVMKIADKGANLVRITVQGKKEADACFEIKNTLVQKNYNIPLVADIHFAPPIALRVAECF 182
           QVM++ADKGA++VRITVQGKKEADACFEIKN+LVQKNYNIPLVADIHFAP +ALRVAECF
Sbjct: 122 QVMRVADKGADIVRITVQGKKEADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECF 181

Query: 183 DKIRVNPGNFADRRAQFEKLEYTEDDYQKELEHIEEVFTPLVEKCKKYGRAIRIGTNHGS 242
           DKIRVNPGNFADRRAQF +LEYTEDDYQKELEHIEEVFTPLVEKCKKYGRA+RIGTNHGS
Sbjct: 182 DKIRVNPGNFADRRAQFVQLEYTEDDYQKELEHIEEVFTPLVEKCKKYGRAMRIGTNHGS 241

Query: 243 LSDRIMSYFGDSPRGMVESAFEFARICRKLDFHNFVFSMKASNPVIMVQAYRLLVSELYV 302
           LSDRIMSYFGDSPRGMVESAFEFARICRKLD+HNFVFSMKASNPV+MVQAYRLLV+E+YV
Sbjct: 242 LSDRIMSYFGDSPRGMVESAFEFARICRKLDYHNFVFSMKASNPVVMVQAYRLLVAEMYV 301

Query: 303 KGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEQPEEEIDPCRRLAT 362
           +GWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTE PEEEIDPCRRLAT
Sbjct: 302 QGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEEEIDPCRRLAT 361

Query: 363 LGMRAAELQQGV--------------RRSGQLPMQKEGEEVDYRGVLHRDGSVLMSVSLD 422
           LGMRAAELQQGV              RRSGQLP+QKEGEEVDYRG LHRDGSVLMSVSLD
Sbjct: 362 LGMRAAELQQGVVPYEEKHRHYFDFQRRSGQLPVQKEGEEVDYRGALHRDGSVLMSVSLD 421

Query: 423 QLKVPELLYKSLAAKLVVGMPFRDLATVDSILLRELPTVDDANGRLALKRLIDISIGVIT 482
           QLK+PELLYK LAAKLVVGMPF+DLATVDSILLRELP VDDA+ RLALKRLIDIS+GVIT
Sbjct: 422 QLKMPELLYKFLAAKLVVGMPFKDLATVDSILLRELPPVDDADARLALKRLIDISMGVIT 481

Query: 483 PLSEQLTKPLPNAMVLVSLKELSSGAHKLLPEGTRLVVSVRGDESYNDLEILKEIDATML 542
           PLSEQLTKPLPNAMVLV+LKELSSGAHKLLP+GTRLVVSVRGDESYNDLE+LKEIDATML
Sbjct: 482 PLSEQLTKPLPNAMVLVNLKELSSGAHKLLPDGTRLVVSVRGDESYNDLEVLKEIDATML 541

Query: 543 FHDLPYSEDKVSRVHAARRLFEYLSENALSFPVIHHIQFPEGIHRDDLVIGAGSNAGSLL 602
           FHDL YSEDKVSRVHAARRLFEYL+ENAL+FPVIHHIQFP+GIHRDDLVIGAGSNAG+LL
Sbjct: 542 FHDLSYSEDKVSRVHAARRLFEYLAENALNFPVIHHIQFPKGIHRDDLVIGAGSNAGALL 601

Query: 603 VDGLGDGVLLEAPDKDFDFVRNASFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEI 662
           VDGLGDGVLLEAPDKDFDF+RN SFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEI
Sbjct: 602 VDGLGDGVLLEAPDKDFDFLRNTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEI 661

Query: 663 RERTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGSPGKIDLYVGKTVVKRGIAMEHATE 722
           RE+TSHLPGVSIAIMGCIVNGPGEMADADFGYVGGSPGKIDLYVGKTVVKRGIAME+AT+
Sbjct: 662 REKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGSPGKIDLYVGKTVVKRGIAMENATD 721

Query: 723 ALIQLMKDHGRWVDPTTEE 728
           ALIQL+KDHGRW+DP TEE
Sbjct: 722 ALIQLIKDHGRWIDPPTEE 740

[Close]

BLAST of Carg12322 vs. ExPASy TrEMBL
Match: A0A6J1DYN4 (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (Ferredoxin), chloroplastic OS=Momordica charantia OX=3673 GN=LOC111025457 PE=3 SV=1)

HSP 1 Score: 1346.6 bits (3484), Expect = 0.0e+00
Identity = 671/741 (90.55%), Postives = 711/741 (95.95%), Query Frame = 0


Query: 1   MTSVGTLPSHLSGLKGGNVNLGFANRLQLVKVSDLKSIRSPGRKVLVIRNSNPGPDIAEL 60
           M + GTLPS L+GLKGGNVNLGFA RL++VKVSDLKS+RS GRKVLV+RNSNPG D+AEL
Sbjct: 1   MATAGTLPSQLTGLKGGNVNLGFAKRLEMVKVSDLKSVRSRGRKVLVVRNSNPGSDLAEL 60

Query: 61  QPASEGSSLLVPRQKYCESLNKTVRRKTRTVMVGNVALGSEHPIRIQTMTTTDTKDVAGT 120
           QPASEGSSLLVPRQKYCES+NKTVRRKTRTVMVGNVALGSEHPIRIQTMTTTDTKDVAGT
Sbjct: 61  QPASEGSSLLVPRQKYCESINKTVRRKTRTVMVGNVALGSEHPIRIQTMTTTDTKDVAGT 120

Query: 121 VEQVMKIADKGANLVRITVQGKKEADACFEIKNTLVQKNYNIPLVADIHFAPPIALRVAE 180
           VEQVM+IADKGA++VRITVQGKKEADACFEIKNTLVQKNYNIPLVADIHFAP +ALRV+E
Sbjct: 121 VEQVMRIADKGADIVRITVQGKKEADACFEIKNTLVQKNYNIPLVADIHFAPTVALRVSE 180

Query: 181 CFDKIRVNPGNFADRRAQFEKLEYTEDDYQKELEHIEEVFTPLVEKCKKYGRAIRIGTNH 240
           CFDKIRVNPGNFADRRAQFEKLEYTEDDYQKELEHIEEVFTPLVEKCKKYGRA+RIGTNH
Sbjct: 181 CFDKIRVNPGNFADRRAQFEKLEYTEDDYQKELEHIEEVFTPLVEKCKKYGRAMRIGTNH 240

Query: 241 GSLSDRIMSYFGDSPRGMVESAFEFARICRKLDFHNFVFSMKASNPVIMVQAYRLLVSEL 300
           GSLSDRIMSYFGDSPRGMVESAFEFARICRKLD+HNFVFSMKASNPV+MVQAYRLLV+E+
Sbjct: 241 GSLSDRIMSYFGDSPRGMVESAFEFARICRKLDYHNFVFSMKASNPVVMVQAYRLLVAEM 300

Query: 301 YVKGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEQPEEEIDPCRRL 360
           YV+GWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTE PEEEIDPCRRL
Sbjct: 301 YVQGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEEEIDPCRRL 360

Query: 361 ATLGMRAAELQQGV--------------RRSGQLPMQKEGEEVDYRGVLHRDGSVLMSVS 420
           A LGMRA+E QQGV              RRSGQLP+QKEGEEVDYRGVLHRDGSVLMSVS
Sbjct: 361 AMLGMRASERQQGVVPYEEKHRHYFDFQRRSGQLPVQKEGEEVDYRGVLHRDGSVLMSVS 420

Query: 421 LDQLKVPELLYKSLAAKLVVGMPFRDLATVDSILLRELPTVDDANGRLALKRLIDISIGV 480
           LDQLK+PELLYKSLAAKLVVGMPF+DLATVDSILLRELP+VDDAN RLALKRLIDIS+G+
Sbjct: 421 LDQLKMPELLYKSLAAKLVVGMPFKDLATVDSILLRELPSVDDANARLALKRLIDISMGI 480

Query: 481 ITPLSEQLTKPLPNAMVLVSLKELSSGAHKLLPEGTRLVVSVRGDESYNDLEILKEIDAT 540
           ITPLSEQLTKPLPNAMVL++LKELSSGAHKLLPEGTRLVVSVRGDE+YN+LEILKEIDAT
Sbjct: 481 ITPLSEQLTKPLPNAMVLINLKELSSGAHKLLPEGTRLVVSVRGDETYNELEILKEIDAT 540

Query: 541 MLFHDLPYSEDKVSRVHAARRLFEYLSENALSFPVIHHIQFPEGIHRDDLVIGAGSNAGS 600
           M+FHDLPYSEDKVSRVHAARRLFEYLSENAL+FPVIHHIQFP+GIHRDDLVIGAGSN G+
Sbjct: 541 MIFHDLPYSEDKVSRVHAARRLFEYLSENALNFPVIHHIQFPKGIHRDDLVIGAGSNVGA 600

Query: 601 LLVDGLGDGVLLEAPDKDFDFVRNASFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISA 660
           LLVDGLGDG+LLEA DKDFDFVRN SFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISA
Sbjct: 601 LLVDGLGDGILLEASDKDFDFVRNTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISA 660

Query: 661 EIRERTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGSPGKIDLYVGKTVVKRGIAMEHA 720
           EIRE+TSHLPGVSIAIMGCIVNGPGEMADADFGYVGGSPGKIDLYVGKTVVKRGIAME+A
Sbjct: 661 EIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGSPGKIDLYVGKTVVKRGIAMENA 720

Query: 721 TEALIQLMKDHGRWVDPTTEE 728
           T+ALIQL+KDHGRWV+P  EE
Sbjct: 721 TDALIQLIKDHGRWVEPPAEE 741

[Close]

BLAST of Carg12322 vs. ExPASy TrEMBL
Match: A0A6J1HZ58 (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (Ferredoxin), chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111469429 PE=3 SV=1)

HSP 1 Score: 1344.7 bits (3479), Expect = 0.0e+00
Identity = 675/741 (91.09%), Postives = 706/741 (95.28%), Query Frame = 0


Query: 1   MTSVGTLPSHLSGLKGGNVNLGFANRLQLVKVSDLKSIRSPGRKVLVIRNSNPGPDIAEL 60
           M S GTLPSHLSGLKGGNVNLGFA RL+ VKVSDLKSIRS GRKVLVIRNSNPG DIAEL
Sbjct: 1   MASAGTLPSHLSGLKGGNVNLGFAKRLESVKVSDLKSIRSRGRKVLVIRNSNPGSDIAEL 60

Query: 61  QPASEGSSLLVPRQKYCESLNKTVRRKTRTVMVGNVALGSEHPIRIQTMTTTDTKDVAGT 120
           QPASEGSSLLVPRQKYCES+NKTVRR TRTVMVGNVALGSEHPIRIQTMTTTDTKDVAGT
Sbjct: 61  QPASEGSSLLVPRQKYCESVNKTVRRNTRTVMVGNVALGSEHPIRIQTMTTTDTKDVAGT 120

Query: 121 VEQVMKIADKGANLVRITVQGKKEADACFEIKNTLVQKNYNIPLVADIHFAPPIALRVAE 180
           VEQVMKIADKGA++VRITVQGKKEADACFEIKNTLVQKNYNIPLVADIHFAP +ALRVAE
Sbjct: 121 VEQVMKIADKGADIVRITVQGKKEADACFEIKNTLVQKNYNIPLVADIHFAPSVALRVAE 180

Query: 181 CFDKIRVNPGNFADRRAQFEKLEYTEDDYQKELEHIEEVFTPLVEKCKKYGRAIRIGTNH 240
           CFDKIRVNPGNFADRRAQFE+LEYT+DDYQKELEHIEEVFTPLVEKCKKYGRA+RIGTNH
Sbjct: 181 CFDKIRVNPGNFADRRAQFEQLEYTDDDYQKELEHIEEVFTPLVEKCKKYGRAMRIGTNH 240

Query: 241 GSLSDRIMSYFGDSPRGMVESAFEFARICRKLDFHNFVFSMKASNPVIMVQAYRLLVSEL 300
           GSLSDRIMSYFGDSPRGMVESAFEFARICRKLDFHNFVFSMKASNPVIMVQAYRLLV+E+
Sbjct: 241 GSLSDRIMSYFGDSPRGMVESAFEFARICRKLDFHNFVFSMKASNPVIMVQAYRLLVAEM 300

Query: 301 YVKGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEQPEEEIDPCRRL 360
           YV+GWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTE PEEEIDPCRRL
Sbjct: 301 YVQGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEEEIDPCRRL 360

Query: 361 ATLGMRAAELQQGV--------------RRSGQLPMQKEGEEVDYRGVLHRDGSVLMSVS 420
           A LGMRAAELQ+GV              RRSGQLP+QKEGEEVDYRG LHRDGSVLMSVS
Sbjct: 361 ANLGMRAAELQKGVVPYEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGALHRDGSVLMSVS 420

Query: 421 LDQLKVPELLYKSLAAKLVVGMPFRDLATVDSILLRELPTVDDANGRLALKRLIDISIGV 480
           LDQLK+PELLYKSLAAKLVVGMPF+DLATVDSILLRELP+VDDA+ RLALKRLIDIS+G+
Sbjct: 421 LDQLKMPELLYKSLAAKLVVGMPFKDLATVDSILLRELPSVDDADARLALKRLIDISMGI 480

Query: 481 ITPLSEQLTKPLPNAMVLVSLKELSSGAHKLLPEGTRLVVSVRGDESYNDLEILKEIDAT 540
           ITPLSEQLTKPLPNAM LV+LKELS+G HKLLP+GTRLVVSVRGDESYN+L +LKEIDAT
Sbjct: 481 ITPLSEQLTKPLPNAMALVTLKELSTGVHKLLPDGTRLVVSVRGDESYNELAVLKEIDAT 540

Query: 541 MLFHDLPYSEDKVSRVHAARRLFEYLSENALSFPVIHHIQFPEGIHRDDLVIGAGSNAGS 600
           MLFHDLPYSEDKVSRVHAARRLFEYLSEN LSFPVIHHIQFP+G HRDDLVIGAGSNAG+
Sbjct: 541 MLFHDLPYSEDKVSRVHAARRLFEYLSENGLSFPVIHHIQFPKGTHRDDLVIGAGSNAGA 600

Query: 601 LLVDGLGDGVLLEAPDKDFDFVRNASFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISA 660
           LLVDGLGDGVLLEAPDKDFDF+RN SFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISA
Sbjct: 601 LLVDGLGDGVLLEAPDKDFDFIRNTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISA 660

Query: 661 EIRERTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGSPGKIDLYVGKTVVKRGIAMEHA 720
           EIRE+TSHLPGVSIAIMGCIVNGPGEMADADFGYVGGSPGKIDLYVGKTVVKRGIAME+A
Sbjct: 661 EIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGSPGKIDLYVGKTVVKRGIAMENA 720

Query: 721 TEALIQLMKDHGRWVDPTTEE 728
           T ALIQL+KDH RWV+P TEE
Sbjct: 721 TNALIQLIKDHDRWVEPPTEE 741

[Close]

BLAST of Carg12322 vs. TAIR 10
Match: AT5G60600.1 (4-hydroxy-3-methylbut-2-enyl diphosphate synthase )

HSP 1 Score: 1224.9 bits (3168), Expect = 0.0e+00
Identity = 607/735 (82.59%), Postives = 671/735 (91.29%), Query Frame = 0


Query: 3   SVGTLPSHLSGLKGGNVNLGFANRLQLVKVSDLKSIRSPGRKVLVIRNSNPGPDIAELQP 62
           + G LP+ +SG+K  +  +GF   + LV++ D++S+RS  R+V VIRNSN G D+AELQP
Sbjct: 2   ATGVLPAPVSGIKIPDSKVGFGKSMNLVRICDVRSLRSARRRVSVIRNSNQGSDLAELQP 61

Query: 63  ASEGSSLLVPRQKYCESLNKTVRRKTRTVMVGNVALGSEHPIRIQTMTTTDTKDVAGTVE 122
           ASEGS LLVPRQKYCESL+KTVRRKTRTVMVGNVALGSEHPIRIQTMTT+DTKD+ GTV+
Sbjct: 62  ASEGSPLLVPRQKYCESLHKTVRRKTRTVMVGNVALGSEHPIRIQTMTTSDTKDITGTVD 121

Query: 123 QVMKIADKGANLVRITVQGKKEADACFEIKNTLVQKNYNIPLVADIHFAPPIALRVAECF 182
           +VM+IADKGA++VRITVQGKKEADACFEIK+ LVQ NYNIPLVADIHFAP +ALRVAECF
Sbjct: 122 EVMRIADKGADIVRITVQGKKEADACFEIKDKLVQLNYNIPLVADIHFAPTVALRVAECF 181

Query: 183 DKIRVNPGNFADRRAQFEKLEYTEDDYQKELEHIEEVFTPLVEKCKKYGRAIRIGTNHGS 242
           DKIRVNPGNFADRRAQFE ++YTED+YQKEL+HIE+VFTPLVEKCKKYGRA+RIGTNHGS
Sbjct: 182 DKIRVNPGNFADRRAQFETIDYTEDEYQKELQHIEQVFTPLVEKCKKYGRAMRIGTNHGS 241

Query: 243 LSDRIMSYFGDSPRGMVESAFEFARICRKLDFHNFVFSMKASNPVIMVQAYRLLVSELYV 302
           LSDRIMSY+GDSPRGMVESAFEFARICRKLD+HNFVFSMKASNPVIMVQAYRLLV+E+YV
Sbjct: 242 LSDRIMSYYGDSPRGMVESAFEFARICRKLDYHNFVFSMKASNPVIMVQAYRLLVAEMYV 301

Query: 303 KGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEQPEEEIDPCRRLAT 362
            GWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTE PEEEIDPCRRLA 
Sbjct: 302 HGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEEEIDPCRRLAN 361

Query: 363 LGMRAAELQQGV--------------RRSGQLPMQKEGEEVDYRGVLHRDGSVLMSVSLD 422
           LG +AA+LQQGV              RR+G LP+QKEGEEVDYR VLHRDGSVLMS+SLD
Sbjct: 362 LGTKAAKLQQGVAPFEEKHRHYFDFQRRTGDLPVQKEGEEVDYRNVLHRDGSVLMSISLD 421

Query: 423 QLKVPELLYKSLAAKLVVGMPFRDLATVDSILLRELPTVDDANGRLALKRLIDISIGVIT 482
           QLK PELLY+SLA KLVVGMPF+DLATVDSILLRELP VDD   RLALKRLID+S+GVI 
Sbjct: 422 QLKAPELLYRSLATKLVVGMPFKDLATVDSILLRELPPVDDQVARLALKRLIDVSMGVIA 481

Query: 483 PLSEQLTKPLPNAMVLVSLKELSSGAHKLLPEGTRLVVSVRGDESYNDLEILKEIDATML 542
           PLSEQLTKPLPNAMVLV+LKELS GA+KLLPEGTRLVVS+RGDE Y +LEILK IDATM+
Sbjct: 482 PLSEQLTKPLPNAMVLVNLKELSGGAYKLLPEGTRLVVSLRGDEPYEELEILKNIDATMI 541

Query: 543 FHDLPYSEDKVSRVHAARRLFEYLSENALSFPVIHHIQFPEGIHRDDLVIGAGSNAGSLL 602
            HD+P++EDKVSRVHAARRLFE+LSEN+++FPVIHHI FP GIHRD+LVI AG+ AG LL
Sbjct: 542 LHDVPFTEDKVSRVHAARRLFEFLSENSVNFPVIHHINFPTGIHRDELVIHAGTYAGGLL 601

Query: 603 VDGLGDGVLLEAPDKDFDFVRNASFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEI 662
           VDGLGDGV+LEAPD+DFDF+RN SFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEI
Sbjct: 602 VDGLGDGVMLEAPDQDFDFLRNTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEI 661

Query: 663 RERTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGSPGKIDLYVGKTVVKRGIAMEHATE 722
           RE+TSHLPGVSIAIMGCIVNGPGEMADADFGYVGGSPGKIDLYVGKTVVKRGIAM  AT+
Sbjct: 662 REKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGSPGKIDLYVGKTVVKRGIAMTEATD 721

Query: 723 ALIQLMKDHGRWVDP 724
           ALI L+K+HGRWVDP
Sbjct: 722 ALIGLIKEHGRWVDP 736

[Close]

BLAST of Carg12322 vs. TAIR 10
Match: AT5G60600.2 (4-hydroxy-3-methylbut-2-enyl diphosphate synthase )

HSP 1 Score: 1223.8 bits (3165), Expect = 0.0e+00
Identity = 606/734 (82.56%), Postives = 670/734 (91.28%), Query Frame = 0


Query: 3   SVGTLPSHLSGLKGGNVNLGFANRLQLVKVSDLKSIRSPGRKVLVIRNSNPGPDIAELQP 62
           + G LP+ +SG+K  +  +GF   + LV++ D++S+RS  R+V VIRNSN G D+AELQP
Sbjct: 2   ATGVLPAPVSGIKIPDSKVGFGKSMNLVRICDVRSLRSARRRVSVIRNSNQGSDLAELQP 61

Query: 63  ASEGSSLLVPRQKYCESLNKTVRRKTRTVMVGNVALGSEHPIRIQTMTTTDTKDVAGTVE 122
           ASEGS LLVPRQKYCESL+KTVRRKTRTVMVGNVALGSEHPIRIQTMTT+DTKD+ GTV+
Sbjct: 62  ASEGSPLLVPRQKYCESLHKTVRRKTRTVMVGNVALGSEHPIRIQTMTTSDTKDITGTVD 121

Query: 123 QVMKIADKGANLVRITVQGKKEADACFEIKNTLVQKNYNIPLVADIHFAPPIALRVAECF 182
           +VM+IADKGA++VRITVQGKKEADACFEIK+ LVQ NYNIPLVADIHFAP +ALRVAECF
Sbjct: 122 EVMRIADKGADIVRITVQGKKEADACFEIKDKLVQLNYNIPLVADIHFAPTVALRVAECF 181

Query: 183 DKIRVNPGNFADRRAQFEKLEYTEDDYQKELEHIEEVFTPLVEKCKKYGRAIRIGTNHGS 242
           DKIRVNPGNFADRRAQFE ++YTED+YQKEL+HIE+VFTPLVEKCKKYGRA+RIGTNHGS
Sbjct: 182 DKIRVNPGNFADRRAQFETIDYTEDEYQKELQHIEQVFTPLVEKCKKYGRAMRIGTNHGS 241

Query: 243 LSDRIMSYFGDSPRGMVESAFEFARICRKLDFHNFVFSMKASNPVIMVQAYRLLVSELYV 302
           LSDRIMSY+GDSPRGMVESAFEFARICRKLD+HNFVFSMKASNPVIMVQAYRLLV+E+YV
Sbjct: 242 LSDRIMSYYGDSPRGMVESAFEFARICRKLDYHNFVFSMKASNPVIMVQAYRLLVAEMYV 301

Query: 303 KGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEQPEEEIDPCRRLAT 362
            GWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTE PEEEIDPCRRLA 
Sbjct: 302 HGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEEEIDPCRRLAN 361

Query: 363 LGMRAAELQQGV-------------RRSGQLPMQKEGEEVDYRGVLHRDGSVLMSVSLDQ 422
           LG +AA+LQQG              RR+G LP+QKEGEEVDYR VLHRDGSVLMS+SLDQ
Sbjct: 362 LGTKAAKLQQGAPFEEKHRHYFDFQRRTGDLPVQKEGEEVDYRNVLHRDGSVLMSISLDQ 421

Query: 423 LKVPELLYKSLAAKLVVGMPFRDLATVDSILLRELPTVDDANGRLALKRLIDISIGVITP 482
           LK PELLY+SLA KLVVGMPF+DLATVDSILLRELP VDD   RLALKRLID+S+GVI P
Sbjct: 422 LKAPELLYRSLATKLVVGMPFKDLATVDSILLRELPPVDDQVARLALKRLIDVSMGVIAP 481

Query: 483 LSEQLTKPLPNAMVLVSLKELSSGAHKLLPEGTRLVVSVRGDESYNDLEILKEIDATMLF 542
           LSEQLTKPLPNAMVLV+LKELS GA+KLLPEGTRLVVS+RGDE Y +LEILK IDATM+ 
Sbjct: 482 LSEQLTKPLPNAMVLVNLKELSGGAYKLLPEGTRLVVSLRGDEPYEELEILKNIDATMIL 541

Query: 543 HDLPYSEDKVSRVHAARRLFEYLSENALSFPVIHHIQFPEGIHRDDLVIGAGSNAGSLLV 602
           HD+P++EDKVSRVHAARRLFE+LSEN+++FPVIHHI FP GIHRD+LVI AG+ AG LLV
Sbjct: 542 HDVPFTEDKVSRVHAARRLFEFLSENSVNFPVIHHINFPTGIHRDELVIHAGTYAGGLLV 601

Query: 603 DGLGDGVLLEAPDKDFDFVRNASFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIR 662
           DGLGDGV+LEAPD+DFDF+RN SFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIR
Sbjct: 602 DGLGDGVMLEAPDQDFDFLRNTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIR 661

Query: 663 ERTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGSPGKIDLYVGKTVVKRGIAMEHATEA 722
           E+TSHLPGVSIAIMGCIVNGPGEMADADFGYVGGSPGKIDLYVGKTVVKRGIAM  AT+A
Sbjct: 662 EKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGSPGKIDLYVGKTVVKRGIAMTEATDA 721

Query: 723 LIQLMKDHGRWVDP 724
           LI L+K+HGRWVDP
Sbjct: 722 LIGLIKEHGRWVDP 735

[Close]

BLAST of Carg12322 vs. TAIR 10
Match: AT5G60600.3 (4-hydroxy-3-methylbut-2-enyl diphosphate synthase )

HSP 1 Score: 1105.9 bits (2859), Expect = 0.0e+00
Identity = 549/672 (81.70%), Postives = 611/672 (90.92%), Query Frame = 0


Query: 3   SVGTLPSHLSGLKGGNVNLGFANRLQLVKVSDLKSIRSPGRKVLVIRNSNPGPDIAELQP 62
           + G LP+ +SG+K  +  +GF   + LV++ D++S+RS  R+V VIRNSN G D+AELQP
Sbjct: 2   ATGVLPAPVSGIKIPDSKVGFGKSMNLVRICDVRSLRSARRRVSVIRNSNQGSDLAELQP 61

Query: 63  ASEGSSLLVPRQKYCESLNKTVRRKTRTVMVGNVALGSEHPIRIQTMTTTDTKDVAGTVE 122
           ASEGS LLVPRQKYCESL+KTVRRKTRTVMVGNVALGSEHPIRIQTMTT+DTKD+ GTV+
Sbjct: 62  ASEGSPLLVPRQKYCESLHKTVRRKTRTVMVGNVALGSEHPIRIQTMTTSDTKDITGTVD 121

Query: 123 QVMKIADKGANLVRITVQGKKEADACFEIKNTLVQKNYNIPLVADIHFAPPIALRVAECF 182
           +VM+IADKGA++VRITVQGKKEADACFEIK+ LVQ NYNIPLVADIHFAP +ALRVAECF
Sbjct: 122 EVMRIADKGADIVRITVQGKKEADACFEIKDKLVQLNYNIPLVADIHFAPTVALRVAECF 181

Query: 183 DKIRVNPGNFADRRAQFEKLEYTEDDYQKELEHIEEVFTPLVEKCKKYGRAIRIGTNHGS 242
           DKIRVNPGNFADRRAQFE ++YTED+YQKEL+HIE+VFTPLVEKCKKYGRA+RIGTNHGS
Sbjct: 182 DKIRVNPGNFADRRAQFETIDYTEDEYQKELQHIEQVFTPLVEKCKKYGRAMRIGTNHGS 241

Query: 243 LSDRIMSYFGDSPRGMVESAFEFARICRKLDFHNFVFSMKASNPVIMVQAYRLLVSELYV 302
           LSDRIMSY+GDSPRGMVESAFEFARICRKLD+HNFVFSMKASNPVIMVQAYRLLV+E+YV
Sbjct: 242 LSDRIMSYYGDSPRGMVESAFEFARICRKLDYHNFVFSMKASNPVIMVQAYRLLVAEMYV 301

Query: 303 KGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEQPEEEIDPCRRLAT 362
            GWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTE PEEEIDPCRRLA 
Sbjct: 302 HGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEEEIDPCRRLAN 361

Query: 363 LGMRAAELQQGV--------------RRSGQLPMQKEGEEVDYRGVLHRDGSVLMSVSLD 422
           LG +AA+LQQGV              RR+G LP+QKEGEEVDYR VLHRDGSVLMS+SLD
Sbjct: 362 LGTKAAKLQQGVAPFEEKHRHYFDFQRRTGDLPVQKEGEEVDYRNVLHRDGSVLMSISLD 421

Query: 423 QLKVPELLYKSLAAKLVVGMPFRDLATVDSILLRELPTVDDANGRLALKRLIDISIGVIT 482
           QLK PELLY+SLA KLVVGMPF+DLATVDSILLRELP VDD   RLALKRLID+S+GVI 
Sbjct: 422 QLKAPELLYRSLATKLVVGMPFKDLATVDSILLRELPPVDDQVARLALKRLIDVSMGVIA 481

Query: 483 PLSEQLTKPLPNAMVLVSLKELSSGAHKLLPEGTRLVVSVRGDESYNDLEILKEIDATML 542
           PLSEQLTKPLPNAMVLV+LKELS GA+KLLPEGTRLVVS+RGDE Y +LEILK IDATM+
Sbjct: 482 PLSEQLTKPLPNAMVLVNLKELSGGAYKLLPEGTRLVVSLRGDEPYEELEILKNIDATMI 541

Query: 543 FHDLPYSEDKVSRVHAARRLFEYLSENALSFPVIHHIQFPEGIHRDDLVIGAGSNAGSLL 602
            HD+P++EDKVSRVHAARRLFE+LSEN+++FPVIHHI FP GIHRD+LVI AG+ AG LL
Sbjct: 542 LHDVPFTEDKVSRVHAARRLFEFLSENSVNFPVIHHINFPTGIHRDELVIHAGTYAGGLL 601

Query: 603 VDGLGDGVLLEAPDKDFDFVRNASFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEI 661
           VDGLGDGV+LEAPD+DFDF+RN SFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEI
Sbjct: 602 VDGLGDGVMLEAPDQDFDFLRNTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEI 661

The following BLAST results are available for this feature:

BLAST of Carg12322 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7036879.1	0.0e+00	100.00	4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin), chloroplastic...	[more]
XP_022948271.1	0.0e+00	98.11	4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin), chloroplastic...	[more]
XP_022998940.1	0.0e+00	97.57	4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin), chloroplastic...	[more]
XP_023522367.1	0.0e+00	97.17	4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin), chloroplastic...	[more]
XP_038895330.1	0.0e+00	91.36	4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin), chloroplastic...	[more]

BLAST of Carg12322 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4K0E8	0.0e+00	82.59	4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin), chloroplastic...	[more]
Q6K8J4	0.0e+00	78.47	4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin), chloroplastic...	[more]
Q6MD85	6.4e-182	50.82	4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) OS=Protochlamy...	[more]
Q9PKY3	7.6e-135	42.90	4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) OS=Chlamydia m...	[more]
Q04UL2	1.1e-130	42.42	4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) OS=Leptospira ...	[more]

BLAST of Carg12322 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G8T7	0.0e+00	98.11	4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (Ferredoxin), chloroplastic...	[more]
A0A6J1KDW7	0.0e+00	97.57	4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (Ferredoxin), chloroplastic...	[more]
K7NBL1	0.0e+00	91.34	4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Siraitia grosvenorii OX=...	[more]
A0A6J1DYN4	0.0e+00	90.55	4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (Ferredoxin), chloroplastic...	[more]
A0A6J1HZ58	0.0e+00	91.09	4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (Ferredoxin), chloroplastic...	[more]

BLAST of Carg12322 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G60600.1	0.0e+00	82.59	4-hydroxy-3-methylbut-2-enyl diphosphate synthase	[more]
AT5G60600.2	0.0e+00	82.56	4-hydroxy-3-methylbut-2-enyl diphosphate synthase	[more]
AT5G60600.3	0.0e+00	81.70	4-hydroxy-3-methylbut-2-enyl diphosphate synthase	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 199..219
None	No IPR available	GENE3D	3.30.413.10	Sulfite Reductase Hemoprotein, domain 1	coord: 624..721 e-value: 2.3E-27 score: 97.2
None	No IPR available	SUPERFAMILY	56014	Nitrite and sulphite reductase 4Fe-4S domain-like	coord: 626..718
IPR004588	4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type	PFAM	PF04551	GcpE	coord: 88..715 e-value: 5.0E-150 score: 499.5
IPR004588	4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type	TIGRFAM	TIGR00612	TIGR00612	coord: 85..369 e-value: 1.0E-101 score: 338.6
IPR004588	4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type	PANTHER	PTHR30454	4-HYDROXY-3-METHYLBUT-2-EN-1-YL DIPHOSPHATE SYNTHASE	coord: 75..376 coord: 537..723
IPR004588	4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type	HAMAP	MF_00159	IspG	coord: 83..719 score: 40.076164
IPR011005	Dihydropteroate synthase-like	GENE3D	3.20.20.20		coord: 81..366 e-value: 4.5E-115 score: 385.8
IPR017178	4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, atypical	PIRSF	PIRSF037336	IspG_partdup	coord: 36..724 e-value: 6.0E-275 score: 912.0

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg12322-RA	Carg12322-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0019288	isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process	GO:0016114	terpenoid biosynthetic process
biological_process	GO:0044237	cellular metabolic process
biological_process	GO:0008299	isoprenoid biosynthetic process
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0046429	4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity
molecular_function	GO:0051539	4 iron, 4 sulfur cluster binding
molecular_function	GO:0003725	double-stranded RNA binding
molecular_function	GO:0005506	iron ion binding