Carg12302 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg12302
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	dof zinc finger protein DOF2.1-like
Location	Carg_Chr01: 2814329 .. 2815280 (+)
RNA-Seq Expression	Carg12302
Synteny	Carg12302

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TCCTCCTCCTCCTCCTCCACCTTCATCAGCTCAGCTCAGCTCAACTCAGGTCAGCTATGGATCTCTCCACCGCCGTCCACCACCAGGTAATTAACCATTCTCCGACATGGGTTGTCCTCAATTTTGTATTATTCTCATTAATTTATGTCTAATTATTATTCCATAGGAAATTGAACAACAACAACATTCAAAACCCTCACTAGACCAAACTAGAAAGCCAAGGCCACAACCAAAGCAAGCCTTGAAATGCCCAAGATGTGATTCACCCAACACCAAATTTTGCTACTACAACAACTACAGCCTCTCCCAACCCCGCTACTTTTGCAAATCCTGCCGCCGTTACTGGACTCAAGGCGGCACCCTCCGCAACGTCCCCGTCGGCGGCGGCTGTCGTAAAAACAAAAGATCCTTCTCCTCCGCTAACTCATCGTCATTATCATCATCATCATCATCGAAAAAACCCCAAGATCATCCCTTTGCCGCTGCCGCAGCGGCGGCGGCGGCTACCGTCTTACCTCATCTCTCCTATGACCACCAAGGGTTGGCATTCGCTAGGCTTCACAAAAACTCATGTGGGTCTGTTACTCCAACGTTCAACGACTTTGATTTCCCTACTTTGGGAATGCCAAACGGTGACATTTTGAATGGGTTCCCGTATAATTCTCAAGGGATGTATTACGACAATAACAACAATAACAACATAGGTGGAATCGAAAGTGGGATAGATCAGATGAGATTACATCCGTACGATCAAGATCATCATGCTACGACGACAGCAGTGACGGTGACGACCATGAAGCACGAGGTTTACAACGCGGGTGACGAAAGTAAAATCCTTTGGGGTTATGCAAATAATAATGGAATTATGGATTCAAATATGATGATGGGTATGGATTTTGGGTTTAGTAATGCTTCTTCATGGCATGGCCTTCTCAATAGCCCACTAATGTAA

mRNA sequence

TCCTCCTCCTCCTCCTCCACCTTCATCAGCTCAGCTCAGCTCAACTCAGGTCAGCTATGGATCTCTCCACCGCCGTCCACCACCAGGAAATTGAACAACAACAACATTCAAAACCCTCACTAGACCAAACTAGAAAGCCAAGGCCACAACCAAAGCAAGCCTTGAAATGCCCAAGATGTGATTCACCCAACACCAAATTTTGCTACTACAACAACTACAGCCTCTCCCAACCCCGCTACTTTTGCAAATCCTGCCGCCGTTACTGGACTCAAGGCGGCACCCTCCGCAACGTCCCCGTCGGCGGCGGCTGTCGTAAAAACAAAAGATCCTTCTCCTCCGCTAACTCATCGTCATTATCATCATCATCATCATCGAAAAAACCCCAAGATCATCCCTTTGCCGCTGCCGCAGCGGCGGCGGCGGCTACCGTCTTACCTCATCTCTCCTATGACCACCAAGGGTTGGCATTCGCTAGGCTTCACAAAAACTCATGTGGGTCTGTTACTCCAACGTTCAACGACTTTGATTTCCCTACTTTGGGAATGCCAAACGGTGACATTTTGAATGGGTTCCCGTATAATTCTCAAGGGATGTATTACGACAATAACAACAATAACAACATAGGTGGAATCGAAAGTGGGATAGATCAGATGAGATTACATCCGTACGATCAAGATCATCATGCTACGACGACAGCAGTGACGGTGACGACCATGAAGCACGAGGTTTACAACGCGGGTGACGAAAGTAAAATCCTTTGGGGTTATGCAAATAATAATGGAATTATGGATTCAAATATGATGATGGGTATGGATTTTGGGTTTAGTAATGCTTCTTCATGGCATGGCCTTCTCAATAGCCCACTAATGTAA

Coding sequence (CDS)

ATGGATCTCTCCACCGCCGTCCACCACCAGGAAATTGAACAACAACAACATTCAAAACCCTCACTAGACCAAACTAGAAAGCCAAGGCCACAACCAAAGCAAGCCTTGAAATGCCCAAGATGTGATTCACCCAACACCAAATTTTGCTACTACAACAACTACAGCCTCTCCCAACCCCGCTACTTTTGCAAATCCTGCCGCCGTTACTGGACTCAAGGCGGCACCCTCCGCAACGTCCCCGTCGGCGGCGGCTGTCGTAAAAACAAAAGATCCTTCTCCTCCGCTAACTCATCGTCATTATCATCATCATCATCATCGAAAAAACCCCAAGATCATCCCTTTGCCGCTGCCGCAGCGGCGGCGGCGGCTACCGTCTTACCTCATCTCTCCTATGACCACCAAGGGTTGGCATTCGCTAGGCTTCACAAAAACTCATGTGGGTCTGTTACTCCAACGTTCAACGACTTTGATTTCCCTACTTTGGGAATGCCAAACGGTGACATTTTGAATGGGTTCCCGTATAATTCTCAAGGGATGTATTACGACAATAACAACAATAACAACATAGGTGGAATCGAAAGTGGGATAGATCAGATGAGATTACATCCGTACGATCAAGATCATCATGCTACGACGACAGCAGTGACGGTGACGACCATGAAGCACGAGGTTTACAACGCGGGTGACGAAAGTAAAATCCTTTGGGGTTATGCAAATAATAATGGAATTATGGATTCAAATATGATGATGGGTATGGATTTTGGGTTTAGTAATGCTTCTTCATGGCATGGCCTTCTCAATAGCCCACTAATGTAA

Protein sequence

MDLSTAVHHQEIEQQQHSKPSLDQTRKPRPQPKQALKCPRCDSPNTKFCYYNNYSLSQPRYFCKSCRRYWTQGGTLRNVPVGGGCRKNKRSFSSANSSSLSSSSSSKKPQDHPFAAAAAAAAATVLPHLSYDHQGLAFARLHKNSCGSVTPTFNDFDFPTLGMPNGDILNGFPYNSQGMYYDNNNNNNIGGIESGIDQMRLHPYDQDHHATTTAVTVTTMKHEVYNAGDESKILWGYANNNGIMDSNMMMGMDFGFSNASSWHGLLNSPLM

Homology

[Close]

BLAST of Carg12302 vs. NCBI nr
Match: KAG7036859.1 (Dof zinc finger protein DOF5.3 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 554.7 bits (1428), Expect = 4.5e-154
Identity = 271/271 (100.00%), Postives = 271/271 (100.00%), Query Frame = 0


Query: 1   MDLSTAVHHQEIEQQQHSKPSLDQTRKPRPQPKQALKCPRCDSPNTKFCYYNNYSLSQPR 60
           MDLSTAVHHQEIEQQQHSKPSLDQTRKPRPQPKQALKCPRCDSPNTKFCYYNNYSLSQPR
Sbjct: 1   MDLSTAVHHQEIEQQQHSKPSLDQTRKPRPQPKQALKCPRCDSPNTKFCYYNNYSLSQPR 60

Query: 61  YFCKSCRRYWTQGGTLRNVPVGGGCRKNKRSFSSANSSSLSSSSSSKKPQDHPFAAAAAA 120
           YFCKSCRRYWTQGGTLRNVPVGGGCRKNKRSFSSANSSSLSSSSSSKKPQDHPFAAAAAA
Sbjct: 61  YFCKSCRRYWTQGGTLRNVPVGGGCRKNKRSFSSANSSSLSSSSSSKKPQDHPFAAAAAA 120

Query: 121 AAATVLPHLSYDHQGLAFARLHKNSCGSVTPTFNDFDFPTLGMPNGDILNGFPYNSQGMY 180
           AAATVLPHLSYDHQGLAFARLHKNSCGSVTPTFNDFDFPTLGMPNGDILNGFPYNSQGMY
Sbjct: 121 AAATVLPHLSYDHQGLAFARLHKNSCGSVTPTFNDFDFPTLGMPNGDILNGFPYNSQGMY 180

Query: 181 YDNNNNNNIGGIESGIDQMRLHPYDQDHHATTTAVTVTTMKHEVYNAGDESKILWGYANN 240
           YDNNNNNNIGGIESGIDQMRLHPYDQDHHATTTAVTVTTMKHEVYNAGDESKILWGYANN
Sbjct: 181 YDNNNNNNIGGIESGIDQMRLHPYDQDHHATTTAVTVTTMKHEVYNAGDESKILWGYANN 240

Query: 241 NGIMDSNMMMGMDFGFSNASSWHGLLNSPLM 272
           NGIMDSNMMMGMDFGFSNASSWHGLLNSPLM
Sbjct: 241 NGIMDSNMMMGMDFGFSNASSWHGLLNSPLM 271

[Close]

BLAST of Carg12302 vs. NCBI nr
Match: KAG6607173.1 (Dof zinc finger protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 541.2 bits (1393), Expect = 5.1e-150
Identity = 268/272 (98.53%), Postives = 269/272 (98.90%), Query Frame = 0


Query: 1   MDLSTAVHHQEIEQQQHSKPSLDQTRKPRPQPKQALKCPRCDSPNTKFCYYNNYSLSQPR 60
           MDLS AVHHQEIEQQQHSKPSLDQTRKPRPQPKQALKCPRCDSPNTKFCYYNNYSLSQPR
Sbjct: 1   MDLSAAVHHQEIEQQQHSKPSLDQTRKPRPQPKQALKCPRCDSPNTKFCYYNNYSLSQPR 60

Query: 61  YFCKSCRRYWTQGGTLRNVPVGGGCRKNKRSFSSANSSSL-SSSSSSKKPQDHPFAAAAA 120
           YFCKSCRRYWTQGGTLRNVPVGGGCRKNKRSFSSANSSSL SSSSSSKKPQDHPFAAAAA
Sbjct: 61  YFCKSCRRYWTQGGTLRNVPVGGGCRKNKRSFSSANSSSLSSSSSSSKKPQDHPFAAAAA 120

Query: 121 AAAATVLPHLSYDHQGLAFARLHKNSCGSVTPTFNDFDFPTLGMPNGDILNGFPYNSQGM 180
           AAAATVLPHLSYDHQGLAFARLHKNSCGSVTPTFNDFDFPTLGMPNGD+LNGFPYNSQGM
Sbjct: 121 AAAATVLPHLSYDHQGLAFARLHKNSCGSVTPTFNDFDFPTLGMPNGDVLNGFPYNSQGM 180

Query: 181 YYDNNNNNNIGGIESGIDQMRLHPYDQDHHATTTAVTVTTMKHEVYNAGDESKILWGYAN 240
           YYD NNNNNIGGIESGIDQMRLHPYDQDHHATTTAVTVTTMKHEVYNAGDESKILWGYAN
Sbjct: 181 YYD-NNNNNIGGIESGIDQMRLHPYDQDHHATTTAVTVTTMKHEVYNAGDESKILWGYAN 240

Query: 241 NNGIMDSNMMMGMDFGFSNASSWHGLLNSPLM 272
           NNGIMDSNMMMGMDFGFSNASSWHGLLNSPLM
Sbjct: 241 NNGIMDSNMMMGMDFGFSNASSWHGLLNSPLM 271

[Close]

BLAST of Carg12302 vs. NCBI nr
Match: XP_023525316.1 (dof zinc finger protein DOF2.1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 517.3 bits (1331), Expect = 7.9e-143
Identity = 258/271 (95.20%), Postives = 261/271 (96.31%), Query Frame = 0


Query: 1   MDLSTAVHHQEIEQQQHSKPSLDQTRKPRPQPKQALKCPRCDSPNTKFCYYNNYSLSQPR 60
           MDLS AV+HQEIEQQQHSKPSLDQTRKPRPQPKQALKCPRCDSPNTKFCYYNNYSLSQPR
Sbjct: 1   MDLSAAVNHQEIEQQQHSKPSLDQTRKPRPQPKQALKCPRCDSPNTKFCYYNNYSLSQPR 60

Query: 61  YFCKSCRRYWTQGGTLRNVPVGGGCRKNKRSFSSANSSSLSSSSSSKKPQDHPFAAAAAA 120
           YFCKSCRRYWTQGGTLRNVPVGGGCRKNKRSFSSANSSSL SSSSSKKPQDHPF   AAA
Sbjct: 61  YFCKSCRRYWTQGGTLRNVPVGGGCRKNKRSFSSANSSSL-SSSSSKKPQDHPF---AAA 120

Query: 121 AAATVLPHLSYDHQGLAFARLHKNSCGSVTPTFNDFDFPTLGMPNGDILNGFPYNSQGMY 180
           A ATVLPHLSYDHQGLAFARLHKNSCGSVTPTFNDFDFPTLGMPNGD+LNGFPYNSQGMY
Sbjct: 121 AVATVLPHLSYDHQGLAFARLHKNSCGSVTPTFNDFDFPTLGMPNGDVLNGFPYNSQGMY 180

Query: 181 YDNNNNNNIGGIESGIDQMRLHPYDQDHHATTTAVTVTTMKHEVYNAGDESKILWGYANN 240
           YD NNNNNIGGIES IDQMRL PYDQDHHATTTAVTVTTMK EVYNAGDESKI+WGYANN
Sbjct: 181 YD-NNNNNIGGIESAIDQMRLQPYDQDHHATTTAVTVTTMKQEVYNAGDESKIVWGYANN 240

Query: 241 NGIMDSNMMMGMDFGFSNASSWHGLLNSPLM 272
           NGIMDSNMMMGMDFGFSNASSWHGLLNSPLM
Sbjct: 241 NGIMDSNMMMGMDFGFSNASSWHGLLNSPLM 266

[Close]

BLAST of Carg12302 vs. NCBI nr
Match: XP_022998890.1 (dof zinc finger protein DOF2.1-like [Cucurbita maxima])

HSP 1 Score: 516.9 bits (1330), Expect = 1.0e-142
Identity = 255/271 (94.10%), Postives = 259/271 (95.57%), Query Frame = 0


Query: 1   MDLSTAVHHQEIEQQQHSKPSLDQTRKPRPQPKQALKCPRCDSPNTKFCYYNNYSLSQPR 60
           MDLS AVHHQEIE QQHSKPSLDQTRKPRPQPKQALKCPRCDSPNTKFCYYNNYSLSQPR
Sbjct: 1   MDLSAAVHHQEIE-QQHSKPSLDQTRKPRPQPKQALKCPRCDSPNTKFCYYNNYSLSQPR 60

Query: 61  YFCKSCRRYWTQGGTLRNVPVGGGCRKNKRSFSSANSSSLSSSSSSKKPQDHPFAAAAAA 120
           YFCKSCRRYWTQGGTLRN+PVGGGCRKNKRSFSSANSSS SSSSSSKKPQDHPFA+AAA 
Sbjct: 61  YFCKSCRRYWTQGGTLRNIPVGGGCRKNKRSFSSANSSSSSSSSSSKKPQDHPFASAAA- 120

Query: 121 AAATVLPHLSYDHQGLAFARLHKNSCGSVTPTFNDFDFPTLGMPNGDILNGFPYNSQGMY 180
                LPHLSYDHQGLAFARLHKNSCGSVTPTFNDFDFPTLGMPNGD+LNGFPYNSQGMY
Sbjct: 121 -----LPHLSYDHQGLAFARLHKNSCGSVTPTFNDFDFPTLGMPNGDVLNGFPYNSQGMY 180

Query: 181 YDNNNNNNIGGIESGIDQMRLHPYDQDHHATTTAVTVTTMKHEVYNAGDESKILWGYANN 240
           YDNNNNNN+GGIESGIDQMRL PYDQDHHATTTAVTVTTMK EVYNAGDESKILWG ANN
Sbjct: 181 YDNNNNNNMGGIESGIDQMRLQPYDQDHHATTTAVTVTTMKQEVYNAGDESKILWGIANN 240

Query: 241 NGIMDSNMMMGMDFGFSNASSWHGLLNSPLM 272
           NGIMDSNMMMGMDFGFSNASSWHGLLNSPLM
Sbjct: 241 NGIMDSNMMMGMDFGFSNASSWHGLLNSPLM 264

[Close]

BLAST of Carg12302 vs. NCBI nr
Match: XP_022949431.1 (dof zinc finger protein DOF5.3-like [Cucurbita moschata])

HSP 1 Score: 516.5 bits (1329), Expect = 1.4e-142
Identity = 258/271 (95.20%), Postives = 259/271 (95.57%), Query Frame = 0


Query: 1   MDLSTAVHHQEIEQQQHSKPSLDQTRKPRPQPKQALKCPRCDSPNTKFCYYNNYSLSQPR 60
           MDLS AVHHQEIE QQHSKPSLDQTRKPRPQPKQALKCPRCDSPNTKFCYYNNYSLSQPR
Sbjct: 1   MDLSAAVHHQEIE-QQHSKPSLDQTRKPRPQPKQALKCPRCDSPNTKFCYYNNYSLSQPR 60

Query: 61  YFCKSCRRYWTQGGTLRNVPVGGGCRKNKRSFSSANSSSLSSSSSSKKPQDHPFAAAAAA 120
           YFCKSCRRYWTQGGTLRNVPVGGGCRKNKRSFSSANSSSL SSSSSKKPQDHP      A
Sbjct: 61  YFCKSCRRYWTQGGTLRNVPVGGGCRKNKRSFSSANSSSL-SSSSSKKPQDHP-----CA 120

Query: 121 AAATVLPHLSYDHQGLAFARLHKNSCGSVTPTFNDFDFPTLGMPNGDILNGFPYNSQGMY 180
           AAATVLPHLSYDHQGLAFARLHKNSCGSVTPTFNDFDFPTLGMPNGD+LNGFPYNSQ MY
Sbjct: 121 AAATVLPHLSYDHQGLAFARLHKNSCGSVTPTFNDFDFPTLGMPNGDVLNGFPYNSQEMY 180

Query: 181 YDNNNNNNIGGIESGIDQMRLHPYDQDHHATTTAVTVTTMKHEVYNAGDESKILWGYANN 240
           YDNNNNNNIGGIESGIDQMRL PYDQDHHATTTAVTVTTMK EVYNAGDESKILWGYANN
Sbjct: 181 YDNNNNNNIGGIESGIDQMRLQPYDQDHHATTTAVTVTTMKQEVYNAGDESKILWGYANN 240

Query: 241 NGIMDSNMMMGMDFGFSNASSWHGLLNSPLM 272
           NGIMDSNMMMGMDFGFSNASSWHGLLNSPLM
Sbjct: 241 NGIMDSNMMMGMDFGFSNASSWHGLLNSPLM 264

[Close]

BLAST of Carg12302 vs. ExPASy Swiss-Prot
Match: Q84JQ8 (Dof zinc finger protein DOF1.8 OS=Arabidopsis thaliana OX=3702 GN=DOF1.8 PE=2 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 6.5e-31
Identity = 68/97 (70.10%), Postives = 78/97 (80.41%), Query Frame = 0


Query: 13  EQQQHSKPSLDQTRKPRPQPKQALKCPRCDSPNTKFCYYNNYSLSQPRYFCKSCRRYWTQ 72
           +Q     P+    RK RP+  QAL CPRC+S NTKFCYYNNYSL+QPRYFCK CRRYWT 
Sbjct: 26  QQSNPPSPATPVERKARPEKDQALNCPRCNSLNTKFCYYNNYSLTQPRYFCKDCRRYWTA 85

Query: 73  GGTLRNVPVGGGCRKNKRSFSSANSSSLSSSSSSKKP 110
           GG+LRN+PVGGG RKNKRS S+++SSS SSSSSSKKP
Sbjct: 86  GGSLRNIPVGGGVRKNKRSSSNSSSSSPSSSSSSKKP 122

[Close]

BLAST of Carg12302 vs. ExPASy Swiss-Prot
Match: Q8LE43 (Dof zinc finger protein DOF2.1 OS=Arabidopsis thaliana OX=3702 GN=DOF2.1 PE=2 SV=2)

HSP 1 Score: 133.3 bits (334), Expect = 4.2e-30
Identity = 99/259 (38.22%), Postives = 138/259 (53.28%), Query Frame = 0


Query: 34  QALKCPRCDSPNTKFCYYNNYSLSQPRYFCKSCRRYWTQGGTLRNVPVGGGCRKNKRSFS 93
           +A  CPRC+SPNTKFCYYNNYSLSQPRYFCKSCRRYWT+GGTLRNVPVGGGCR+NKRS S
Sbjct: 46  EAQNCPRCESPNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGGCRRNKRSSS 105

Query: 94  SANSSSLSSSSSS--KKPQDHPFAAAAAAAAATVLPHLSYDHQ---GLAFARLHKNSCGS 153
           SA S + ++ S +    P  +P       ++        YDH     LAFA L K+   S
Sbjct: 106 SAFSKNNNNKSINFHTDPLQNPLITGMPPSS------FGYDHSIDLNLAFATLQKHHLSS 165

Query: 154 VTPTFNDFDFPTLGMPNGDILNGFPYNSQGMYYDNN---NNNNIGGIESGIDQMRLHPYD 213
              T      P+ G      + G   N  G++   N   NN+   G  SG      +  +
Sbjct: 166 QATT------PSFGFGGDLSIYGNSTNDVGIFGGQNGTYNNSLCYGFMSGNGN---NNQN 225

Query: 214 QDHHATTTAVTV-------TTMKHEVYNAGDESKILWGY-----ANNNGIMDSNMMMGMD 272
           +   A+T  +++         + +   N+ + SK+ WG+      ++ G++   +  G +
Sbjct: 226 EIKMASTLGMSLEGNERKQENVNNNNNNSENPSKVFWGFPWQMTGDSAGVV-PEIDPGRE 285

[Close]

BLAST of Carg12302 vs. ExPASy Swiss-Prot
Match: Q9LZ56 (Dof zinc finger protein DOF5.1 OS=Arabidopsis thaliana OX=3702 GN=DOF5.1 PE=2 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 1.6e-29
Identity = 75/174 (43.10%), Postives = 102/174 (58.62%), Query Frame = 0


Query: 30  PQPKQALKCPRCDSPNTKFCYYNNYSLSQPRYFCKSCRRYWTQGGTLRNVPVGGGCRKNK 89
           P P+ ALKCPRCDS NTKFCY+NNYSL+QPR+FCK+CRRYWT+GG LR+VPVGGGCR+NK
Sbjct: 89  PLPETALKCPRCDSTNTKFCYFNNYSLTQPRHFCKACRRYWTRGGALRSVPVGGGCRRNK 148

Query: 90  RSFSSANSSSLSSSSSSKKPQDHPFAAAAAAAAATVLPHLSYDHQGLAFARLHKNSCGSV 149
           R+ +S+     S+SS + K QD            +   +  Y H+ +A  ++   S  S 
Sbjct: 149 RTKNSSGGGGGSTSSGNSKSQD------------SATSNDQYHHRAMANNQMGPPSSSSS 208

Query: 150 TPTFNDFDFPTLGMPNGDILNGFPYNSQGMYYDNNNNNNIGGIESGIDQMRLHP 204
             +        L   N  ++ G  +NS        NNNNI G+ S +  ++L P
Sbjct: 209 LSSL-------LSSYNAGLIPGHDHNS--------NNNNILGLGSSLPPLKLMP 235

[Close]

BLAST of Carg12302 vs. ExPASy Swiss-Prot
Match: O24463 (Dof zinc finger protein PBF OS=Zea mays OX=4577 GN=PBF PE=1 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 2.1e-29
Identity = 62/81 (76.54%), Postives = 68/81 (83.95%), Query Frame = 0


Query: 26  RKPRPQPKQALKCPRCDSPNTKFCYYNNYSLSQPRYFCKSCRRYWTQGGTLRNVPVGGGC 85
           RKPRPQ  +ALKCPRCDS NTKFCYYNNYS+SQPRYFCK+CRRYWT GGTLRNVP+GGGC
Sbjct: 50  RKPRPQLPEALKCPRCDSNNTKFCYYNNYSMSQPRYFCKACRRYWTHGGTLRNVPIGGGC 109

Query: 86  RKNKRSFSSANSSSLSSSSSS 107
           RKNK +      S  SSSSS+
Sbjct: 110 RKNKHASRFVLGSHTSSSSSA 130

[Close]

BLAST of Carg12302 vs. ExPASy Swiss-Prot
Match: Q84TE9 (Dof zinc finger protein DOF5.3 OS=Arabidopsis thaliana OX=3702 GN=DOF5.3 PE=2 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 1.8e-28
Identity = 80/149 (53.69%), Postives = 96/149 (64.43%), Query Frame = 0


Query: 1   MDLSTAVHHQEIEQQQHSKPSLDQTRKPRPQPKQ-ALKCPRCDSPNTKFCYYNNYSLSQP 60
           M LS + +   ++  Q  KPS   T   RPQP + AL+CPRCDS NTKFCYYNNYSL+QP
Sbjct: 21  MGLSYSSNPTPLDNDQ-KKPS-PATAVTRPQPPELALRCPRCDSTNTKFCYYNNYSLTQP 80

Query: 61  RYFCKSCRRYWTQGGTLRNVPVGGGCRKNKRSFSSANSSSLSSSSSSKKPQDHPFAAAAA 120
           RYFCKSCRRYWT+GGTLRN+PVGGGCRKNKRS SSA      S  ++ +P  H      +
Sbjct: 81  RYFCKSCRRYWTKGGTLRNIPVGGGCRKNKRSTSSA----ARSLRTTPEPASHD-GKVFS 140

Query: 121 AAAATVLPHLSYDHQGLAFARLHKNSCGS 149
           AA      +  +    LAFA L+K   GS
Sbjct: 141 AAGFNGYSNNEHIDLSLAFALLNKQHPGS 162

[Close]

BLAST of Carg12302 vs. ExPASy TrEMBL
Match: A0A6J1KDS2 (dof zinc finger protein DOF2.1-like OS=Cucurbita maxima OX=3661 GN=LOC111493413 PE=4 SV=1)

HSP 1 Score: 516.9 bits (1330), Expect = 5.0e-143
Identity = 255/271 (94.10%), Postives = 259/271 (95.57%), Query Frame = 0


Query: 1   MDLSTAVHHQEIEQQQHSKPSLDQTRKPRPQPKQALKCPRCDSPNTKFCYYNNYSLSQPR 60
           MDLS AVHHQEIE QQHSKPSLDQTRKPRPQPKQALKCPRCDSPNTKFCYYNNYSLSQPR
Sbjct: 1   MDLSAAVHHQEIE-QQHSKPSLDQTRKPRPQPKQALKCPRCDSPNTKFCYYNNYSLSQPR 60

Query: 61  YFCKSCRRYWTQGGTLRNVPVGGGCRKNKRSFSSANSSSLSSSSSSKKPQDHPFAAAAAA 120
           YFCKSCRRYWTQGGTLRN+PVGGGCRKNKRSFSSANSSS SSSSSSKKPQDHPFA+AAA 
Sbjct: 61  YFCKSCRRYWTQGGTLRNIPVGGGCRKNKRSFSSANSSSSSSSSSSKKPQDHPFASAAA- 120

Query: 121 AAATVLPHLSYDHQGLAFARLHKNSCGSVTPTFNDFDFPTLGMPNGDILNGFPYNSQGMY 180
                LPHLSYDHQGLAFARLHKNSCGSVTPTFNDFDFPTLGMPNGD+LNGFPYNSQGMY
Sbjct: 121 -----LPHLSYDHQGLAFARLHKNSCGSVTPTFNDFDFPTLGMPNGDVLNGFPYNSQGMY 180

Query: 181 YDNNNNNNIGGIESGIDQMRLHPYDQDHHATTTAVTVTTMKHEVYNAGDESKILWGYANN 240
           YDNNNNNN+GGIESGIDQMRL PYDQDHHATTTAVTVTTMK EVYNAGDESKILWG ANN
Sbjct: 181 YDNNNNNNMGGIESGIDQMRLQPYDQDHHATTTAVTVTTMKQEVYNAGDESKILWGIANN 240

Query: 241 NGIMDSNMMMGMDFGFSNASSWHGLLNSPLM 272
           NGIMDSNMMMGMDFGFSNASSWHGLLNSPLM
Sbjct: 241 NGIMDSNMMMGMDFGFSNASSWHGLLNSPLM 264

[Close]

BLAST of Carg12302 vs. ExPASy TrEMBL
Match: A0A6J1GC03 (dof zinc finger protein DOF5.3-like OS=Cucurbita moschata OX=3662 GN=LOC111452780 PE=4 SV=1)

HSP 1 Score: 516.5 bits (1329), Expect = 6.5e-143
Identity = 258/271 (95.20%), Postives = 259/271 (95.57%), Query Frame = 0


Query: 1   MDLSTAVHHQEIEQQQHSKPSLDQTRKPRPQPKQALKCPRCDSPNTKFCYYNNYSLSQPR 60
           MDLS AVHHQEIE QQHSKPSLDQTRKPRPQPKQALKCPRCDSPNTKFCYYNNYSLSQPR
Sbjct: 1   MDLSAAVHHQEIE-QQHSKPSLDQTRKPRPQPKQALKCPRCDSPNTKFCYYNNYSLSQPR 60

Query: 61  YFCKSCRRYWTQGGTLRNVPVGGGCRKNKRSFSSANSSSLSSSSSSKKPQDHPFAAAAAA 120
           YFCKSCRRYWTQGGTLRNVPVGGGCRKNKRSFSSANSSSL SSSSSKKPQDHP      A
Sbjct: 61  YFCKSCRRYWTQGGTLRNVPVGGGCRKNKRSFSSANSSSL-SSSSSKKPQDHP-----CA 120

Query: 121 AAATVLPHLSYDHQGLAFARLHKNSCGSVTPTFNDFDFPTLGMPNGDILNGFPYNSQGMY 180
           AAATVLPHLSYDHQGLAFARLHKNSCGSVTPTFNDFDFPTLGMPNGD+LNGFPYNSQ MY
Sbjct: 121 AAATVLPHLSYDHQGLAFARLHKNSCGSVTPTFNDFDFPTLGMPNGDVLNGFPYNSQEMY 180

Query: 181 YDNNNNNNIGGIESGIDQMRLHPYDQDHHATTTAVTVTTMKHEVYNAGDESKILWGYANN 240
           YDNNNNNNIGGIESGIDQMRL PYDQDHHATTTAVTVTTMK EVYNAGDESKILWGYANN
Sbjct: 181 YDNNNNNNIGGIESGIDQMRLQPYDQDHHATTTAVTVTTMKQEVYNAGDESKILWGYANN 240

Query: 241 NGIMDSNMMMGMDFGFSNASSWHGLLNSPLM 272
           NGIMDSNMMMGMDFGFSNASSWHGLLNSPLM
Sbjct: 241 NGIMDSNMMMGMDFGFSNASSWHGLLNSPLM 264

[Close]

BLAST of Carg12302 vs. ExPASy TrEMBL
Match: A0A0A0LSJ8 (Dof-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G089510 PE=4 SV=1)

HSP 1 Score: 336.3 bits (861), Expect = 1.2e-88
Identity = 207/327 (63.30%), Postives = 221/327 (67.58%), Query Frame = 0


Query: 1   MDLSTAVHHQEIEQQ--------QHSKPSLDQTRKPRPQPKQALKCPRCDSPNTKFCYYN 60
           MDL TA HHQE+E          Q+SK    Q RK RPQP+QALKCPRCDS NTKFCYYN
Sbjct: 1   MDLPTAQHHQEMETNSVENMMVCQNSKD--HQVRKARPQPEQALKCPRCDSTNTKFCYYN 60

Query: 61  NYSLSQPRYFCKSCRRYWTQGGTLRNVPVGGGCRKNKRSFSSANSSSLSSSSSSKKPQDH 120
           NYSLSQPRYFCKSCRRYWTQGGTLRNVPVGGGCRKNKRS     SSS SSS+SSKK QDH
Sbjct: 61  NYSLSQPRYFCKSCRRYWTQGGTLRNVPVGGGCRKNKRS-----SSSSSSSASSKKSQDH 120

Query: 121 PFAAAAAAAAATVLP-HLSYDHQ----GLAFARLHKNSC--GSVTPTFNDFDFPTLGMPN 180
           PF       A+T LP  LSYDHQ     LAFARLHKNSC  GSV PTFNDFDF  LGMPN
Sbjct: 121 PF------GASTALPGQLSYDHQAHDLSLAFARLHKNSCSNGSV-PTFNDFDFSILGMPN 180

Query: 181 GDILN--GFPYNSQGMYYDNNNNNNIGGIESGIDQMRLHPYDQDHH----------ATTT 240
           GD+LN  GF YNSQ +YY N+NN    GIES  DQMRL PYD DHH          ATTT
Sbjct: 181 GDVLNGGGFAYNSQSLYYGNDNNMG-AGIESNGDQMRLQPYDHDHHHHHHNQQYSNATTT 240

Query: 241 AVTVTTMKHEVY------NAGDESKILWGYA------NNNGIMDSN-----MMMGMDF-- 272
           AVTVTTMK E++      N  D+SKILWGY       NNN ++DSN     MM  MDF  
Sbjct: 241 AVTVTTMKQELFGGREMNNGSDQSKILWGYPNWQMNNNNNNVIDSNTTTTTMMGAMDFDS 300

[Close]

BLAST of Carg12302 vs. ExPASy TrEMBL
Match: A0A5D3CM87 (Dof zinc finger protein DOF5.3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold769G00570 PE=4 SV=1)

HSP 1 Score: 334.7 bits (857), Expect = 3.5e-88
Identity = 193/295 (65.42%), Postives = 208/295 (70.51%), Query Frame = 0


Query: 24  QTRKPRPQPKQALKCPRCDSPNTKFCYYNNYSLSQPRYFCKSCRRYWTQGGTLRNVPVGG 83
           QTRK RPQP+QALKCPRCDS NTKFCYYNNYSLSQPRYFCKSCRRYWTQGGTLRNVPVGG
Sbjct: 11  QTRKARPQPEQALKCPRCDSTNTKFCYYNNYSLSQPRYFCKSCRRYWTQGGTLRNVPVGG 70

Query: 84  GCRKNKRSFSSANSSSLSSSSSSKKPQDHPFAAAAAAAAATVLP-HLSYDHQ----GLAF 143
           GCRKNKRS     SSS SSS+SSKK QDHPF       A+T LP  LSYDHQ     LAF
Sbjct: 71  GCRKNKRS-----SSSSSSSASSKKSQDHPF------GASTALPGQLSYDHQAHDLSLAF 130

Query: 144 ARLHKNSCGS-VTPTFNDFDFPTLGMPNGDILN--GFPYNSQGMYYDNNNNNNIGGIESG 203
           ARLHKNSC +   PTFNDFDF  LGMPNGD+LN  GFPYNSQ +YY   N+NN+GG+ES 
Sbjct: 131 ARLHKNSCSNGGVPTFNDFDFSILGMPNGDLLNGGGFPYNSQSLYY--GNDNNMGGMESN 190

Query: 204 IDQMRLHPYDQDHH-----------ATTTAVTVTTMKHEVY-----NAGDESKILWGYA- 263
            DQMRL PYD DHH           ATTTAVTVTTMK E++     N GD+SKILWGY  
Sbjct: 191 GDQMRLQPYDHDHHHHHHHNQQYSNATTTAVTVTTMKQELFGGREINGGDQSKILWGYPN 250

Query: 264 -----NNNGIMDSN-----MMMGMDF------------GFSNASSWHGLLNSPLM 272
                NNN ++DSN     MM  MDF             F+N SSWHGLLNSPLM
Sbjct: 251 WQMNNNNNNVIDSNTTTTTMMAAMDFDSGSARESWNNNAFTNTSSWHGLLNSPLM 292

[Close]

BLAST of Carg12302 vs. ExPASy TrEMBL
Match: A0A6J1I2W0 (dof zinc finger protein DOF2.1-like OS=Cucurbita maxima OX=3661 GN=LOC111469422 PE=4 SV=1)

HSP 1 Score: 296.2 bits (757), Expect = 1.4e-76
Identity = 178/290 (61.38%), Postives = 203/290 (70.00%), Query Frame = 0


Query: 1   MDLSTAVHHQEIEQQQHSKPSLDQTRKPRPQPKQALKCPRCDSPNTKFCYYNNYSLSQPR 60
           MDL TA H      QQ    S +Q +KPRPQP+QALKCPRCDS NTKFCYYNNYSLSQPR
Sbjct: 1   MDLPTAPH------QQIDTNSKEQPKKPRPQPEQALKCPRCDSTNTKFCYYNNYSLSQPR 60

Query: 61  YFCKSCRRYWTQGGTLRNVPVGGGCRKNKRSFSSANSSSLSSSSSSKKPQDHPFAAAAAA 120
           YFCKSCRRYWTQGGTLRNVPVGGGCRKNKRS SS++SSS + ++SSKKPQDHPF +   A
Sbjct: 61  YFCKSCRRYWTQGGTLRNVPVGGGCRKNKRS-SSSSSSSSAIAASSKKPQDHPFTSPVPA 120

Query: 121 AAATVLPHLSYDHQ----GLAFARLHKNSCGSVTPTFNDFDFPTLGMPNGDILNGFPYNS 180
                LPHL+YDHQ     LAFARLHK   G+   +FNDFDF         + NGF YNS
Sbjct: 121 -----LPHLAYDHQANDLSLAFARLHKTGTGTGPSSFNDFDF--------SVFNGFGYNS 180

Query: 181 QGMYYDNNNNNNIGGIESGIDQMRLHPYDQDH-HATT--TAVTVTTMKHEVY-NAGDESK 240
           Q +YYD++NNNN+GG   GI+  RLH YD  + +ATT  TA TVTT K EV    G+ES+
Sbjct: 181 QPVYYDDDNNNNMGG---GIE--RLHSYDHQYGNATTTATATTVTTTKQEVLGGGGEESR 240

Query: 241 ILWGYAN---NNGIMDSNMMMGMDFGF--------SNASSWHGLLNSPLM 272
           +LWGY N   NN   DSN MMGMDF          +N SSWHGLLN+PLM
Sbjct: 241 MLWGYPNWQMNNNSTDSN-MMGMDFDSGAVRESWNNNVSSWHGLLNTPLM 264

[Close]

BLAST of Carg12302 vs. TAIR 10
Match: AT1G64620.1 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 136.0 bits (341), Expect = 4.6e-32
Identity = 68/97 (70.10%), Postives = 78/97 (80.41%), Query Frame = 0


Query: 13  EQQQHSKPSLDQTRKPRPQPKQALKCPRCDSPNTKFCYYNNYSLSQPRYFCKSCRRYWTQ 72
           +Q     P+    RK RP+  QAL CPRC+S NTKFCYYNNYSL+QPRYFCK CRRYWT 
Sbjct: 26  QQSNPPSPATPVERKARPEKDQALNCPRCNSLNTKFCYYNNYSLTQPRYFCKDCRRYWTA 85

Query: 73  GGTLRNVPVGGGCRKNKRSFSSANSSSLSSSSSSKKP 110
           GG+LRN+PVGGG RKNKRS S+++SSS SSSSSSKKP
Sbjct: 86  GGSLRNIPVGGGVRKNKRSSSNSSSSSPSSSSSSKKP 122

[Close]

BLAST of Carg12302 vs. TAIR 10
Match: AT2G28510.1 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 133.3 bits (334), Expect = 3.0e-31
Identity = 99/259 (38.22%), Postives = 138/259 (53.28%), Query Frame = 0


Query: 34  QALKCPRCDSPNTKFCYYNNYSLSQPRYFCKSCRRYWTQGGTLRNVPVGGGCRKNKRSFS 93
           +A  CPRC+SPNTKFCYYNNYSLSQPRYFCKSCRRYWT+GGTLRNVPVGGGCR+NKRS S
Sbjct: 46  EAQNCPRCESPNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGGCRRNKRSSS 105

Query: 94  SANSSSLSSSSSS--KKPQDHPFAAAAAAAAATVLPHLSYDHQ---GLAFARLHKNSCGS 153
           SA S + ++ S +    P  +P       ++        YDH     LAFA L K+   S
Sbjct: 106 SAFSKNNNNKSINFHTDPLQNPLITGMPPSS------FGYDHSIDLNLAFATLQKHHLSS 165

Query: 154 VTPTFNDFDFPTLGMPNGDILNGFPYNSQGMYYDNN---NNNNIGGIESGIDQMRLHPYD 213
              T      P+ G      + G   N  G++   N   NN+   G  SG      +  +
Sbjct: 166 QATT------PSFGFGGDLSIYGNSTNDVGIFGGQNGTYNNSLCYGFMSGNGN---NNQN 225

Query: 214 QDHHATTTAVTV-------TTMKHEVYNAGDESKILWGY-----ANNNGIMDSNMMMGMD 272
           +   A+T  +++         + +   N+ + SK+ WG+      ++ G++   +  G +
Sbjct: 226 EIKMASTLGMSLEGNERKQENVNNNNNNSENPSKVFWGFPWQMTGDSAGVV-PEIDPGRE 285

[Close]

BLAST of Carg12302 vs. TAIR 10
Match: AT5G02460.1 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 131.3 bits (329), Expect = 1.1e-30
Identity = 75/174 (43.10%), Postives = 102/174 (58.62%), Query Frame = 0


Query: 30  PQPKQALKCPRCDSPNTKFCYYNNYSLSQPRYFCKSCRRYWTQGGTLRNVPVGGGCRKNK 89
           P P+ ALKCPRCDS NTKFCY+NNYSL+QPR+FCK+CRRYWT+GG LR+VPVGGGCR+NK
Sbjct: 89  PLPETALKCPRCDSTNTKFCYFNNYSLTQPRHFCKACRRYWTRGGALRSVPVGGGCRRNK 148

Query: 90  RSFSSANSSSLSSSSSSKKPQDHPFAAAAAAAAATVLPHLSYDHQGLAFARLHKNSCGSV 149
           R+ +S+     S+SS + K QD            +   +  Y H+ +A  ++   S  S 
Sbjct: 149 RTKNSSGGGGGSTSSGNSKSQD------------SATSNDQYHHRAMANNQMGPPSSSSS 208

Query: 150 TPTFNDFDFPTLGMPNGDILNGFPYNSQGMYYDNNNNNNIGGIESGIDQMRLHP 204
             +        L   N  ++ G  +NS        NNNNI G+ S +  ++L P
Sbjct: 209 LSSL-------LSSYNAGLIPGHDHNS--------NNNNILGLGSSLPPLKLMP 235

[Close]

BLAST of Carg12302 vs. TAIR 10
Match: AT5G60200.1 (TARGET OF MONOPTEROS 6 )

HSP 1 Score: 127.9 bits (320), Expect = 1.3e-29
Identity = 80/149 (53.69%), Postives = 96/149 (64.43%), Query Frame = 0


Query: 1   MDLSTAVHHQEIEQQQHSKPSLDQTRKPRPQPKQ-ALKCPRCDSPNTKFCYYNNYSLSQP 60
           M LS + +   ++  Q  KPS   T   RPQP + AL+CPRCDS NTKFCYYNNYSL+QP
Sbjct: 21  MGLSYSSNPTPLDNDQ-KKPS-PATAVTRPQPPELALRCPRCDSTNTKFCYYNNYSLTQP 80

Query: 61  RYFCKSCRRYWTQGGTLRNVPVGGGCRKNKRSFSSANSSSLSSSSSSKKPQDHPFAAAAA 120
           RYFCKSCRRYWT+GGTLRN+PVGGGCRKNKRS SSA      S  ++ +P  H      +
Sbjct: 81  RYFCKSCRRYWTKGGTLRNIPVGGGCRKNKRSTSSA----ARSLRTTPEPASHD-GKVFS 140

Query: 121 AAAATVLPHLSYDHQGLAFARLHKNSCGS 149
           AA      +  +    LAFA L+K   GS
Sbjct: 141 AAGFNGYSNNEHIDLSLAFALLNKQHPGS 162

[Close]

BLAST of Carg12302 vs. TAIR 10
Match: AT5G62940.1 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 125.2 bits (313), Expect = 8.2e-29
Identity = 106/309 (34.30%), Postives = 143/309 (46.28%), Query Frame = 0


Query: 22  LDQTRKPRPQPKQALKCPRCDSPNTKFCYYNNYSLSQPRYFCKSCRRYWTQGGTLRNVPV 81
           +D  R+ RP      KCPRC+S +TKFCYYNNYSLSQPRYFCK+CRRYWT+GGTLRN+PV
Sbjct: 59  MDGGRRLRPPHDHPQKCPRCESTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPV 118

Query: 82  GGGCRKNKRSFSSANSSSLSSSSSSKKPQDHPFAAAAAAAAATVLPHLSYDHQGLAFARL 141
           GGGCRKNK+  SS+NSS  SS+SS KKP  +   A  +   A    H +Y H  L F+  
Sbjct: 119 GGGCRKNKKP-SSSNSS--SSTSSGKKP-SNIVTANTSDLMALAHSHQNYQHSPLGFSHF 178

Query: 142 HKNSCGSVTP-----------------------TFNDFDFPTLGMPNGDIL------NGF 201
                   TP                        F D  F  +G+ N +++      NG 
Sbjct: 179 GGMMGSYSTPEHGNVGFLESKYGGLLSQSPRPIDFLDSKFDLMGVNNDNLVMVNHGSNGD 238

Query: 202 PYN--------SQGMYYDNNNNN-NIGGIESG-------------IDQMRLHPYD----- 261
            ++        + G+  +NNNNN    GI +G               ++ L  YD     
Sbjct: 239 HHHHHNHHMGLNHGVGLNNNNNNGGFNGISTGGNGNGGGLMDISTCQRLMLSNYDHHHYN 298

Query: 262 --QDHHATTTAVTVTTMKHEVYNAGDESKILWGYANNNGIMDSNMMMGMDFGFSN----- 268
             +DH    T + V      +     + +    Y+N  G   +    G  +G        
Sbjct: 299 HQEDHQRVATIMDVKPNPKLLSLDWQQDQC---YSNGGGSGGAGKSDGGGYGNGGYINGL 358

The following BLAST results are available for this feature:

BLAST of Carg12302 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7036859.1	4.5e-154	100.00	Dof zinc finger protein DOF5.3 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6607173.1	5.1e-150	98.53	Dof zinc finger protein, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023525316.1	7.9e-143	95.20	dof zinc finger protein DOF2.1-like [Cucurbita pepo subsp. pepo]	[more]
XP_022998890.1	1.0e-142	94.10	dof zinc finger protein DOF2.1-like [Cucurbita maxima]	[more]
XP_022949431.1	1.4e-142	95.20	dof zinc finger protein DOF5.3-like [Cucurbita moschata]	[more]

BLAST of Carg12302 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q84JQ8	6.5e-31	70.10	Dof zinc finger protein DOF1.8 OS=Arabidopsis thaliana OX=3702 GN=DOF1.8 PE=2 SV...	[more]
Q8LE43	4.2e-30	38.22	Dof zinc finger protein DOF2.1 OS=Arabidopsis thaliana OX=3702 GN=DOF2.1 PE=2 SV...	[more]
Q9LZ56	1.6e-29	43.10	Dof zinc finger protein DOF5.1 OS=Arabidopsis thaliana OX=3702 GN=DOF5.1 PE=2 SV...	[more]
O24463	2.1e-29	76.54	Dof zinc finger protein PBF OS=Zea mays OX=4577 GN=PBF PE=1 SV=1	[more]
Q84TE9	1.8e-28	53.69	Dof zinc finger protein DOF5.3 OS=Arabidopsis thaliana OX=3702 GN=DOF5.3 PE=2 SV...	[more]

BLAST of Carg12302 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KDS2	5.0e-143	94.10	dof zinc finger protein DOF2.1-like OS=Cucurbita maxima OX=3661 GN=LOC111493413 ...	[more]
A0A6J1GC03	6.5e-143	95.20	dof zinc finger protein DOF5.3-like OS=Cucurbita moschata OX=3662 GN=LOC11145278...	[more]
A0A0A0LSJ8	1.2e-88	63.30	Dof-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G089510 PE...	[more]
A0A5D3CM87	3.5e-88	65.42	Dof zinc finger protein DOF5.3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]
A0A6J1I2W0	1.4e-76	61.38	dof zinc finger protein DOF2.1-like OS=Cucurbita maxima OX=3661 GN=LOC111469422 ...	[more]

BLAST of Carg12302 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G64620.1	4.6e-32	70.10	Dof-type zinc finger DNA-binding family protein	[more]
AT2G28510.1	3.0e-31	38.22	Dof-type zinc finger DNA-binding family protein	[more]
AT5G02460.1	1.1e-30	43.10	Dof-type zinc finger DNA-binding family protein	[more]
AT5G60200.1	1.3e-29	53.69	TARGET OF MONOPTEROS 6	[more]
AT5G62940.1	8.2e-29	34.30	Dof-type zinc finger DNA-binding family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003851	Zinc finger, Dof-type	PFAM	PF02701	zf-Dof	coord: 34..90 e-value: 1.9E-33 score: 114.4
IPR003851	Zinc finger, Dof-type	PROSITE	PS01361	ZF_DOF_1	coord: 38..74
IPR003851	Zinc finger, Dof-type	PROSITE	PS50884	ZF_DOF_2	coord: 36..90 score: 29.496931
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 92..110
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 12..26
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..38
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 92..112
None	No IPR available	PANTHER	PTHR31992	DOF ZINC FINGER PROTEIN DOF1.4-RELATED	coord: 17..270
None	No IPR available	PANTHER	PTHR31992:SF221	DOF ZINC FINGER PROTEIN DOF3.2-LIKE	coord: 17..270

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg12302-RA	Carg12302-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding