Carg12299 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg12299
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Protein of unknown function (DUF1635)
Location	Carg_Chr01: 2785084 .. 2785948 (+)
RNA-Seq Expression	Carg12299
Synteny	Carg12299

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTCTGTTTCTCTGTTCCTCTGTTTCTCTGTTTCTTTCTCTAAACTCCATGGATAACCAACGCAGCCCTGTTTTAACTTGGGCTTATTTCTTGCAAACCAAGGTCAGTTTCATACCCATCTTCTCAAATTCTCCCTTGCTTTTTGTGGGTATTTCCCAGAATTTCGAAATTCGGTTCTGATTTTGATTTTGTGGTTCCTCTGTTTTTTCTTTGGCAGAACGTCGATGAACTCAGGCATTCTCTTCTGTGCACCACTCTGGAGCTTGAACAGACCAAAATTACAGTCCAAGAGGAGCTTAACAAGAAGGACGACCAGCTTTTACATCTCAAGAATCTTTTAAATCAAGCCATTAGAGAAAGAGACGAAGCCAATGAGAAATGCCAAACCCTTCTCCTCCAGAAACTGTTATTCCATCATCAACACCCACCGCCGCCGCCGCCGCCGAATCCACCGCCGCCTCTCTCTGCAATTTCCACCATCGACGACCAACCCAGAAAAGGATTCGATTCCCAAAACGCCTTCTCCTCCTCCGATTGCGATGAGAGTATCGTTTCATCTCCCGAAATCATCGACTGGGTCCCTGAAAAGCCATTGCCGGAAAAGGGTAAGCTCTTGCAGGCAGTGATGAACGCCGGTCCACTTCTACACACACTTCTCCTCGCTGGACCACTTCCTCAATGGAGACATCCACCACCGCCACTCGAATCGTTTCATTTGCCGCCGGTTACAATTCCACTTCCTCCGCTGCTACCGTCGCTCGCCGACACTAATTGTGGGATTGTCAACAAGAAGAGGGCTCTGTCTCTATGCGAGGATTCGGATTCTCAAACCGCAACCAAATTCCAGAGGCTTGTTTTCAACTGA

mRNA sequence

TCTCTGTTTCTCTGTTCCTCTGTTTCTCTGTTTCTTTCTCTAAACTCCATGGATAACCAACGCAGCCCTGTTTTAACTTGGGCTTATTTCTTGCAAACCAAGAACGTCGATGAACTCAGGCATTCTCTTCTGTGCACCACTCTGGAGCTTGAACAGACCAAAATTACAGTCCAAGAGGAGCTTAACAAGAAGGACGACCAGCTTTTACATCTCAAGAATCTTTTAAATCAAGCCATTAGAGAAAGAGACGAAGCCAATGAGAAATGCCAAACCCTTCTCCTCCAGAAACTGTTATTCCATCATCAACACCCACCGCCGCCGCCGCCGCCGAATCCACCGCCGCCTCTCTCTGCAATTTCCACCATCGACGACCAACCCAGAAAAGGATTCGATTCCCAAAACGCCTTCTCCTCCTCCGATTGCGATGAGAGTATCGTTTCATCTCCCGAAATCATCGACTGGGTCCCTGAAAAGCCATTGCCGGAAAAGGGTAAGCTCTTGCAGGCAGTGATGAACGCCGGTCCACTTCTACACACACTTCTCCTCGCTGGACCACTTCCTCAATGGAGACATCCACCACCGCCACTCGAATCGTTTCATTTGCCGCCGGTTACAATTCCACTTCCTCCGCTGCTACCGTCGCTCGCCGACACTAATTGTGGGATTGTCAACAAGAAGAGGGCTCTGTCTCTATGCGAGGATTCGGATTCTCAAACCGCAACCAAATTCCAGAGGCTTGTTTTCAACTGA

Coding sequence (CDS)

ATGGATAACCAACGCAGCCCTGTTTTAACTTGGGCTTATTTCTTGCAAACCAAGAACGTCGATGAACTCAGGCATTCTCTTCTGTGCACCACTCTGGAGCTTGAACAGACCAAAATTACAGTCCAAGAGGAGCTTAACAAGAAGGACGACCAGCTTTTACATCTCAAGAATCTTTTAAATCAAGCCATTAGAGAAAGAGACGAAGCCAATGAGAAATGCCAAACCCTTCTCCTCCAGAAACTGTTATTCCATCATCAACACCCACCGCCGCCGCCGCCGCCGAATCCACCGCCGCCTCTCTCTGCAATTTCCACCATCGACGACCAACCCAGAAAAGGATTCGATTCCCAAAACGCCTTCTCCTCCTCCGATTGCGATGAGAGTATCGTTTCATCTCCCGAAATCATCGACTGGGTCCCTGAAAAGCCATTGCCGGAAAAGGGTAAGCTCTTGCAGGCAGTGATGAACGCCGGTCCACTTCTACACACACTTCTCCTCGCTGGACCACTTCCTCAATGGAGACATCCACCACCGCCACTCGAATCGTTTCATTTGCCGCCGGTTACAATTCCACTTCCTCCGCTGCTACCGTCGCTCGCCGACACTAATTGTGGGATTGTCAACAAGAAGAGGGCTCTGTCTCTATGCGAGGATTCGGATTCTCAAACCGCAACCAAATTCCAGAGGCTTGTTTTCAACTGA

Protein sequence

MDNQRSPVLTWAYFLQTKNVDELRHSLLCTTLELEQTKITVQEELNKKDDQLLHLKNLLNQAIRERDEANEKCQTLLLQKLLFHHQHPPPPPPPNPPPPLSAISTIDDQPRKGFDSQNAFSSSDCDESIVSSPEIIDWVPEKPLPEKGKLLQAVMNAGPLLHTLLLAGPLPQWRHPPPPLESFHLPPVTIPLPPLLPSLADTNCGIVNKKRALSLCEDSDSQTATKFQRLVFN

Homology

[Close]

BLAST of Carg12299 vs. NCBI nr
Match: KAG7036856.1 (hypothetical protein SDJN02_00476 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 467.2 bits (1201), Expect = 8.1e-128
Identity = 233/233 (100.00%), Postives = 233/233 (100.00%), Query Frame = 0


Query: 1   MDNQRSPVLTWAYFLQTKNVDELRHSLLCTTLELEQTKITVQEELNKKDDQLLHLKNLLN 60
           MDNQRSPVLTWAYFLQTKNVDELRHSLLCTTLELEQTKITVQEELNKKDDQLLHLKNLLN
Sbjct: 1   MDNQRSPVLTWAYFLQTKNVDELRHSLLCTTLELEQTKITVQEELNKKDDQLLHLKNLLN 60

Query: 61  QAIRERDEANEKCQTLLLQKLLFHHQHPPPPPPPNPPPPLSAISTIDDQPRKGFDSQNAF 120
           QAIRERDEANEKCQTLLLQKLLFHHQHPPPPPPPNPPPPLSAISTIDDQPRKGFDSQNAF
Sbjct: 61  QAIRERDEANEKCQTLLLQKLLFHHQHPPPPPPPNPPPPLSAISTIDDQPRKGFDSQNAF 120

Query: 121 SSSDCDESIVSSPEIIDWVPEKPLPEKGKLLQAVMNAGPLLHTLLLAGPLPQWRHPPPPL 180
           SSSDCDESIVSSPEIIDWVPEKPLPEKGKLLQAVMNAGPLLHTLLLAGPLPQWRHPPPPL
Sbjct: 121 SSSDCDESIVSSPEIIDWVPEKPLPEKGKLLQAVMNAGPLLHTLLLAGPLPQWRHPPPPL 180

Query: 181 ESFHLPPVTIPLPPLLPSLADTNCGIVNKKRALSLCEDSDSQTATKFQRLVFN 234
           ESFHLPPVTIPLPPLLPSLADTNCGIVNKKRALSLCEDSDSQTATKFQRLVFN
Sbjct: 181 ESFHLPPVTIPLPPLLPSLADTNCGIVNKKRALSLCEDSDSQTATKFQRLVFN 233

[Close]

BLAST of Carg12299 vs. NCBI nr
Match: XP_022948979.1 (uncharacterized protein LOC111452463 [Cucurbita moschata] >KAG6607168.1 hypothetical protein SDJN03_00510, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 456.4 bits (1173), Expect = 1.4e-124
Identity = 230/233 (98.71%), Postives = 230/233 (98.71%), Query Frame = 0


Query: 1   MDNQRSPVLTWAYFLQTKNVDELRHSLLCTTLELEQTKITVQEELNKKDDQLLHLKNLLN 60
           MDNQRSPVLTWAYFLQTKNVDELRHSLLCTTLELEQTKITVQEELNKKDDQLLHLKNLLN
Sbjct: 1   MDNQRSPVLTWAYFLQTKNVDELRHSLLCTTLELEQTKITVQEELNKKDDQLLHLKNLLN 60

Query: 61  QAIRERDEANEKCQTLLLQKLLFHHQHPPPPPPPNPPPPLSAISTIDDQPRKGFDSQNAF 120
           QAIRERDEANEKCQTLLLQKL FHHQH PPPPPPNPPPPLSAISTIDDQPRKGFDSQNAF
Sbjct: 61  QAIRERDEANEKCQTLLLQKLFFHHQH-PPPPPPNPPPPLSAISTIDDQPRKGFDSQNAF 120

Query: 121 SSSDCDESIVSSPEIIDWVPEKPLPEKGKLLQAVMNAGPLLHTLLLAGPLPQWRHPPPPL 180
           SSSDCDESIVSSPEIIDWVPEKPLPEKGKLLQAVMNAGPLLHTLLLAGPLPQWRHPPPPL
Sbjct: 121 SSSDCDESIVSSPEIIDWVPEKPLPEKGKLLQAVMNAGPLLHTLLLAGPLPQWRHPPPPL 180

Query: 181 ESFHLPPVTIPLPPLLPSLADTNCGIVNKKRALSLCEDSDSQTATKFQRLVFN 234
           ESFHLPPVTIPLPP LPSLADTNCGIVNKKRALSLCEDSDSQTATKFQRLVFN
Sbjct: 181 ESFHLPPVTIPLPPPLPSLADTNCGIVNKKRALSLCEDSDSQTATKFQRLVFN 232

[Close]

BLAST of Carg12299 vs. NCBI nr
Match: XP_022998894.1 (uncharacterized protein LOC111493418 [Cucurbita maxima])

HSP 1 Score: 451.4 bits (1160), Expect = 4.6e-123
Identity = 227/233 (97.42%), Postives = 229/233 (98.28%), Query Frame = 0


Query: 1   MDNQRSPVLTWAYFLQTKNVDELRHSLLCTTLELEQTKITVQEELNKKDDQLLHLKNLLN 60
           MDNQRSPVLTWAYFLQTKNVDELRHSLLCTTLELEQTKITVQEELNKKDDQLLHLKNLLN
Sbjct: 1   MDNQRSPVLTWAYFLQTKNVDELRHSLLCTTLELEQTKITVQEELNKKDDQLLHLKNLLN 60

Query: 61  QAIRERDEANEKCQTLLLQKLLFHHQHPPPPPPPNPPPPLSAISTIDDQPRKGFDSQNAF 120
           QAIRERDEANEKCQTLLLQK+ FHHQHPPPPPPP PPPPLSAISTIDD PRKGFDSQNAF
Sbjct: 61  QAIRERDEANEKCQTLLLQKMFFHHQHPPPPPPP-PPPPLSAISTIDDYPRKGFDSQNAF 120

Query: 121 SSSDCDESIVSSPEIIDWVPEKPLPEKGKLLQAVMNAGPLLHTLLLAGPLPQWRHPPPPL 180
           SSSDCDESIVSSPEIIDWVPEKPLPEKGKLLQAVMNAGPLLHTLLLAGPLPQWRHPPPPL
Sbjct: 121 SSSDCDESIVSSPEIIDWVPEKPLPEKGKLLQAVMNAGPLLHTLLLAGPLPQWRHPPPPL 180

Query: 181 ESFHLPPVTIPLPPLLPSLADTNCGIVNKKRALSLCEDSDSQTATKFQRLVFN 234
           ESFHLPPVTIPLPP LPSLAD+NCGIVNKKRALSLCEDSDSQTATKFQRLVFN
Sbjct: 181 ESFHLPPVTIPLPPPLPSLADSNCGIVNKKRALSLCEDSDSQTATKFQRLVFN 232

[Close]

BLAST of Carg12299 vs. NCBI nr
Match: XP_023525552.1 (uncharacterized protein LOC111789130 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 446.4 bits (1147), Expect = 1.5e-121
Identity = 226/233 (97.00%), Postives = 227/233 (97.42%), Query Frame = 0


Query: 1   MDNQRSPVLTWAYFLQTKNVDELRHSLLCTTLELEQTKITVQEELNKKDDQLLHLKNLLN 60
           MDNQRSPVLTWAYFLQTKNVDELRHSLLCTTLELEQTKITVQEELNKKDDQLLHLKNLLN
Sbjct: 1   MDNQRSPVLTWAYFLQTKNVDELRHSLLCTTLELEQTKITVQEELNKKDDQLLHLKNLLN 60

Query: 61  QAIRERDEANEKCQTLLLQKLLFHHQHPPPPPPPNPPPPLSAISTIDDQPRKGFDSQNAF 120
           QAIRERDEANEKCQTLLLQKL FHHQH PPPPPPNPPPPLSAISTIDDQPRKGFDSQNAF
Sbjct: 61  QAIRERDEANEKCQTLLLQKLFFHHQH-PPPPPPNPPPPLSAISTIDDQPRKGFDSQNAF 120

Query: 121 SSSDCDESIVSSPEIIDWVPEKPLPEKGKLLQAVMNAGPLLHTLLLAGPLPQWRHPPPPL 180
           SSSDCDESIVSSPEIIDWVPEKPLPEKGKLLQAVMNAGPLLHTLLLAGPLPQWRHPPPPL
Sbjct: 121 SSSDCDESIVSSPEIIDWVPEKPLPEKGKLLQAVMNAGPLLHTLLLAGPLPQWRHPPPPL 180

Query: 181 ESFHLPPVTIPLPPLLPSLADTNCGIVNKKRALSLCEDSDSQTATKFQRLVFN 234
           ESFHLPPV IPLPP LPSLAD+NCGIVNKKRAL L EDSDSQTATKFQRLVFN
Sbjct: 181 ESFHLPPVRIPLPPPLPSLADSNCGIVNKKRALFLSEDSDSQTATKFQRLVFN 232

[Close]

BLAST of Carg12299 vs. NCBI nr
Match: XP_008463249.1 (PREDICTED: arp2/3 complex-activating protein rickA [Cucumis melo])

HSP 1 Score: 335.5 bits (859), Expect = 3.7e-88
Identity = 180/245 (73.47%), Postives = 192/245 (78.37%), Query Frame = 0


Query: 1   MDNQRSPVLTWAYFLQTKNVDELRHSLLCTTLELEQTKITVQEELNKKDDQLLHLKNLLN 60
           MDN RSPV TWAYFLQ  N+DELRHSLLCTTLELEQT+I VQEEL K+DDQ+LHLKNLLN
Sbjct: 1   MDNHRSPVFTWAYFLQANNIDELRHSLLCTTLELEQTRIAVQEELKKRDDQVLHLKNLLN 60

Query: 61  QAIRERDEANEKCQTLLLQKLLFHHQHPPPPPPPNPPPPLSAISTIDDQPRKGFDSQNAF 120
           QAI+ERDEAN+KC+ LLL KL F +QH  P            ISTIDD P K FDSQNAF
Sbjct: 61  QAIKERDEANKKCENLLLHKLFF-NQHSAP------------ISTIDDDPTKAFDSQNAF 120

Query: 121 SSSDCDESIVS-------SPEIIDWVPEKPLPEKGKLLQAVMNAGPLLHTLLLAGPLPQW 180
           SSSDCDESIVS        PEI DW+ +KPLPEKGKLLQAVM AGPLL TLLLAGPLPQW
Sbjct: 121 SSSDCDESIVSVSSPVPPPPEISDWISDKPLPEKGKLLQAVMKAGPLLQTLLLAGPLPQW 180

Query: 181 RHPPPPLESFHLPPVTIPLPPLLPSLAD-----TNCGIVNKKRALSLCEDSDSQTATKFQ 234
           RHPPPPLESFHLPPV IPLPP  P         TNCGIVNKKRALSLCE+SDS  ATKFQ
Sbjct: 181 RHPPPPLESFHLPPVAIPLPPPPPPPVPVHSEATNCGIVNKKRALSLCEESDSLPATKFQ 232

[Close]

BLAST of Carg12299 vs. ExPASy TrEMBL
Match: A0A6J1GBI0 (uncharacterized protein LOC111452463 OS=Cucurbita moschata OX=3662 GN=LOC111452463 PE=4 SV=1)

HSP 1 Score: 456.4 bits (1173), Expect = 6.9e-125
Identity = 230/233 (98.71%), Postives = 230/233 (98.71%), Query Frame = 0


Query: 1   MDNQRSPVLTWAYFLQTKNVDELRHSLLCTTLELEQTKITVQEELNKKDDQLLHLKNLLN 60
           MDNQRSPVLTWAYFLQTKNVDELRHSLLCTTLELEQTKITVQEELNKKDDQLLHLKNLLN
Sbjct: 1   MDNQRSPVLTWAYFLQTKNVDELRHSLLCTTLELEQTKITVQEELNKKDDQLLHLKNLLN 60

Query: 61  QAIRERDEANEKCQTLLLQKLLFHHQHPPPPPPPNPPPPLSAISTIDDQPRKGFDSQNAF 120
           QAIRERDEANEKCQTLLLQKL FHHQH PPPPPPNPPPPLSAISTIDDQPRKGFDSQNAF
Sbjct: 61  QAIRERDEANEKCQTLLLQKLFFHHQH-PPPPPPNPPPPLSAISTIDDQPRKGFDSQNAF 120

Query: 121 SSSDCDESIVSSPEIIDWVPEKPLPEKGKLLQAVMNAGPLLHTLLLAGPLPQWRHPPPPL 180
           SSSDCDESIVSSPEIIDWVPEKPLPEKGKLLQAVMNAGPLLHTLLLAGPLPQWRHPPPPL
Sbjct: 121 SSSDCDESIVSSPEIIDWVPEKPLPEKGKLLQAVMNAGPLLHTLLLAGPLPQWRHPPPPL 180

Query: 181 ESFHLPPVTIPLPPLLPSLADTNCGIVNKKRALSLCEDSDSQTATKFQRLVFN 234
           ESFHLPPVTIPLPP LPSLADTNCGIVNKKRALSLCEDSDSQTATKFQRLVFN
Sbjct: 181 ESFHLPPVTIPLPPPLPSLADTNCGIVNKKRALSLCEDSDSQTATKFQRLVFN 232

[Close]

BLAST of Carg12299 vs. ExPASy TrEMBL
Match: A0A6J1KFK7 (uncharacterized protein LOC111493418 OS=Cucurbita maxima OX=3661 GN=LOC111493418 PE=4 SV=1)

HSP 1 Score: 451.4 bits (1160), Expect = 2.2e-123
Identity = 227/233 (97.42%), Postives = 229/233 (98.28%), Query Frame = 0


Query: 1   MDNQRSPVLTWAYFLQTKNVDELRHSLLCTTLELEQTKITVQEELNKKDDQLLHLKNLLN 60
           MDNQRSPVLTWAYFLQTKNVDELRHSLLCTTLELEQTKITVQEELNKKDDQLLHLKNLLN
Sbjct: 1   MDNQRSPVLTWAYFLQTKNVDELRHSLLCTTLELEQTKITVQEELNKKDDQLLHLKNLLN 60

Query: 61  QAIRERDEANEKCQTLLLQKLLFHHQHPPPPPPPNPPPPLSAISTIDDQPRKGFDSQNAF 120
           QAIRERDEANEKCQTLLLQK+ FHHQHPPPPPPP PPPPLSAISTIDD PRKGFDSQNAF
Sbjct: 61  QAIRERDEANEKCQTLLLQKMFFHHQHPPPPPPP-PPPPLSAISTIDDYPRKGFDSQNAF 120

Query: 121 SSSDCDESIVSSPEIIDWVPEKPLPEKGKLLQAVMNAGPLLHTLLLAGPLPQWRHPPPPL 180
           SSSDCDESIVSSPEIIDWVPEKPLPEKGKLLQAVMNAGPLLHTLLLAGPLPQWRHPPPPL
Sbjct: 121 SSSDCDESIVSSPEIIDWVPEKPLPEKGKLLQAVMNAGPLLHTLLLAGPLPQWRHPPPPL 180

Query: 181 ESFHLPPVTIPLPPLLPSLADTNCGIVNKKRALSLCEDSDSQTATKFQRLVFN 234
           ESFHLPPVTIPLPP LPSLAD+NCGIVNKKRALSLCEDSDSQTATKFQRLVFN
Sbjct: 181 ESFHLPPVTIPLPPPLPSLADSNCGIVNKKRALSLCEDSDSQTATKFQRLVFN 232

[Close]

BLAST of Carg12299 vs. ExPASy TrEMBL
Match: A0A1S3CKC5 (arp2/3 complex-activating protein rickA OS=Cucumis melo OX=3656 GN=LOC103501451 PE=4 SV=1)

HSP 1 Score: 335.5 bits (859), Expect = 1.8e-88
Identity = 180/245 (73.47%), Postives = 192/245 (78.37%), Query Frame = 0


Query: 1   MDNQRSPVLTWAYFLQTKNVDELRHSLLCTTLELEQTKITVQEELNKKDDQLLHLKNLLN 60
           MDN RSPV TWAYFLQ  N+DELRHSLLCTTLELEQT+I VQEEL K+DDQ+LHLKNLLN
Sbjct: 1   MDNHRSPVFTWAYFLQANNIDELRHSLLCTTLELEQTRIAVQEELKKRDDQVLHLKNLLN 60

Query: 61  QAIRERDEANEKCQTLLLQKLLFHHQHPPPPPPPNPPPPLSAISTIDDQPRKGFDSQNAF 120
           QAI+ERDEAN+KC+ LLL KL F +QH  P            ISTIDD P K FDSQNAF
Sbjct: 61  QAIKERDEANKKCENLLLHKLFF-NQHSAP------------ISTIDDDPTKAFDSQNAF 120

Query: 121 SSSDCDESIVS-------SPEIIDWVPEKPLPEKGKLLQAVMNAGPLLHTLLLAGPLPQW 180
           SSSDCDESIVS        PEI DW+ +KPLPEKGKLLQAVM AGPLL TLLLAGPLPQW
Sbjct: 121 SSSDCDESIVSVSSPVPPPPEISDWISDKPLPEKGKLLQAVMKAGPLLQTLLLAGPLPQW 180

Query: 181 RHPPPPLESFHLPPVTIPLPPLLPSLAD-----TNCGIVNKKRALSLCEDSDSQTATKFQ 234
           RHPPPPLESFHLPPV IPLPP  P         TNCGIVNKKRALSLCE+SDS  ATKFQ
Sbjct: 181 RHPPPPLESFHLPPVAIPLPPPPPPPVPVHSEATNCGIVNKKRALSLCEESDSLPATKFQ 232

[Close]

BLAST of Carg12299 vs. ExPASy TrEMBL
Match: A0A0A0LS86 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G097650 PE=4 SV=1)

HSP 1 Score: 328.6 bits (841), Expect = 2.2e-86
Identity = 175/245 (71.43%), Postives = 191/245 (77.96%), Query Frame = 0


Query: 1   MDNQRSPVLTWAYFLQTKNVDELRHSLLCTTLELEQTKITVQEELNKKDDQLLHLKNLLN 60
           MDN RSPV TWAYFLQ  N+DELRHSLLCTTLELEQT+I VQEEL ++DDQ+ HLKNLLN
Sbjct: 1   MDNHRSPVFTWAYFLQANNIDELRHSLLCTTLELEQTRIAVQEELKRRDDQVFHLKNLLN 60

Query: 61  QAIRERDEANEKCQTLLLQKLLFHHQHPPPPPPPNPPPPLSAISTIDDQPRKGFDSQNAF 120
           QAI+ERDEAN+KC+ LLL KL F +QH  P            ISTIDD P K FDSQNAF
Sbjct: 61  QAIKERDEANKKCENLLLHKLFF-NQHSAP------------ISTIDDDPTKAFDSQNAF 120

Query: 121 SSSDCDESIVS-------SPEIIDWVPEKPLPEKGKLLQAVMNAGPLLHTLLLAGPLPQW 180
           SSSDCDESIVS        P+I DW+ +KPLPEKGKLLQAVM AGPLL TLLLAGPLPQW
Sbjct: 121 SSSDCDESIVSVSSPVPPPPDISDWISDKPLPEKGKLLQAVMKAGPLLQTLLLAGPLPQW 180

Query: 181 RHPPPPLESFHLPPVTIPLPPLLPSLAD-----TNCGIVNKKRALSLCEDSDSQTATKFQ 234
           RHPPPPLESFHLPPV IP PP  P L       T+CGIVNKKRALSLCE+SD+  ATKFQ
Sbjct: 181 RHPPPPLESFHLPPVAIPHPPPPPPLVPVHSEATHCGIVNKKRALSLCEESDTLPATKFQ 232

[Close]

BLAST of Carg12299 vs. ExPASy TrEMBL
Match: A0A5A7V2S7 (Arp2/3 complex-activating protein rickA OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold609G00230 PE=4 SV=1)

HSP 1 Score: 309.7 bits (792), Expect = 1.0e-80
Identity = 172/245 (70.20%), Postives = 184/245 (75.10%), Query Frame = 0


Query: 1   MDNQRSPVLTWAYFLQTKNVDELRHSLLCTTLELEQTKITVQEELNKKDDQLLHLKNLLN 60
           MDN RSP           N+DELRHSLLCTTLELEQT+I VQEEL K+DDQ+LHLKNLLN
Sbjct: 1   MDNHRSP-----------NIDELRHSLLCTTLELEQTRIAVQEELKKRDDQVLHLKNLLN 60

Query: 61  QAIRERDEANEKCQTLLLQKLLFHHQHPPPPPPPNPPPPLSAISTIDDQPRKGFDSQNAF 120
           QAI+ERDEAN+KC+ LLL KL F +QH  P            ISTIDD P K FDSQNAF
Sbjct: 61  QAIKERDEANKKCENLLLHKLFF-NQHSAP------------ISTIDDDPTKAFDSQNAF 120

Query: 121 SSSDCDESIVS-------SPEIIDWVPEKPLPEKGKLLQAVMNAGPLLHTLLLAGPLPQW 180
           SSSDCDESIVS        PEI DW+ +KPLPEKGKLLQAVM AGPLL TLLLAGPLPQW
Sbjct: 121 SSSDCDESIVSVSSPVPPPPEISDWISDKPLPEKGKLLQAVMKAGPLLQTLLLAGPLPQW 180

Query: 181 RHPPPPLESFHLPPVTIPLPPLLPSLAD-----TNCGIVNKKRALSLCEDSDSQTATKFQ 234
           RHPPPPLESFHLPPV IPLPP  P         TNCGIVNKKRALSLCE+SDS  ATKFQ
Sbjct: 181 RHPPPPLESFHLPPVAIPLPPPPPPPVPVHSEATNCGIVNKKRALSLCEESDSLPATKFQ 221

[Close]

BLAST of Carg12299 vs. TAIR 10
Match: AT5G22930.1 (Protein of unknown function (DUF1635) )

HSP 1 Score: 196.4 bits (498), Expect = 2.5e-50
Identity = 119/253 (47.04%), Postives = 156/253 (61.66%), Query Frame = 0


Query: 1   MDNQRSPVLTWAYFLQTKNVDELRHSLLCTTLELEQTKITVQEELNKKDDQLLHLKNLLN 60
           MDNQ + +L W Y+   K  +E+R SLL TTLEL+QTK+   EE+ K+D+QL+HLK++L 
Sbjct: 1   MDNQSNALLGWPYYSHAKTTEEIRQSLLYTTLELDQTKMFAYEEIRKRDEQLIHLKDILT 60

Query: 61  QAIRERDEANEKCQTLLLQKLLFHHQHPPPPPPPNPPPPLSAISTIDD---QPRKGFDSQ 120
           + I+ERDEA EKCQ L+        Q        +  PPLS  S+I+D   QP++   S 
Sbjct: 61  KTIKERDEALEKCQRLMFDSHSLQQQ-------KHMTPPLSGASSIEDEQVQPQQ-LRSN 120

Query: 121 NAFSSSDCDESI-----------------VSSPEII--DWVPEKPLPEKGKLLQAVMNAG 180
            +FSSSDC+ESI                 VS  EII    + +KPLPEKGKLLQAV+ AG
Sbjct: 121 KSFSSSDCEESIMSPTDHIMNPPPCQLEEVSGTEIIMDPLLQDKPLPEKGKLLQAVIKAG 180

Query: 181 PLLHTLLLAGPLPQWRHPPPPLESFHLPPVTIPLPPLLPSLADTNCGIVNKKRALSLCED 232
           PLL TLLLAGPLPQWRHPPPPL+SF +PPVT+  P     + +  CG  N+KR  S    
Sbjct: 181 PLLQTLLLAGPLPQWRHPPPPLKSFEIPPVTVQCP-----IVNNGCGKFNRKRVFS---- 236

[Close]

BLAST of Carg12299 vs. TAIR 10
Match: AT3G44940.1 (Protein of unknown function (DUF1635) )

HSP 1 Score: 193.0 bits (489), Expect = 2.7e-49
Identity = 121/256 (47.27%), Postives = 163/256 (63.67%), Query Frame = 0


Query: 3   NQRSPVLTWAYFLQTKNVDELRHSLLCTTLELEQTKITVQEELNKKDDQLLHLKNLLNQA 62
           +Q + +L+W YF   K  +ELR +L+ TT+ELEQTK+   EEL K+D+QL+HL+++L + 
Sbjct: 2   DQSNSLLSWTYFSHGKTTEELRQTLVYTTMELEQTKLVAHEELRKRDEQLIHLEDVLTKT 61

Query: 63  IRERDEANEKCQTLLLQKLLFH--HQHPPPPPPPNPPPPLSAISTIDD----QPRK-GFD 122
           ++ERDEA EK   LLL  LL     Q           PPLS  S+I +    QP++   +
Sbjct: 62  LKERDEALEKYNHLLLNNLLLQQKQQQNQNQKQELVTPPLSGASSIIEDEQVQPQQPQLN 121

Query: 123 SQNAFSSSDCDESIVSSPEIIDWV------------------PEKPLPEKGKLLQAVMNA 182
           S  +FSSSD +ESI+ SP +ID V                  P+KPLPEKGKLLQAV+ A
Sbjct: 122 SNKSFSSSDTEESIM-SPSVIDPVTMNQQIEVSGDEMLATLLPDKPLPEKGKLLQAVIKA 181

Query: 183 GPLLHTLLLAGPLPQWRHPPPPLESFHLPPVTIPLPPLLPSLADTNCGIVNKKRALSLCE 234
           GPLL TLLLAGPLPQWRHPPPPLE+  +PPVTIP    LP   +  CG  NKKRA S+ +
Sbjct: 182 GPLLQTLLLAGPLPQWRHPPPPLETSEIPPVTIP----LPQFQNNGCGNSNKKRAFSISD 241

[Close]

BLAST of Carg12299 vs. TAIR 10
Match: AT2G28140.1 (Protein of unknown function (DUF1635) )

HSP 1 Score: 159.5 bits (402), Expect = 3.4e-39
Identity = 111/236 (47.03%), Postives = 143/236 (60.59%), Query Frame = 0


Query: 4   QRSPVLTWAYFLQ--TKNVDELRHSLLCTTLELEQTKITVQEELNKKDDQLLHLKNLLNQ 63
           Q++ +L+W++  Q   K ++ELRHSLL TT+ELEQT++   EEL  KDDQ++ LK+LLN+
Sbjct: 5   QQNYLLSWSHQNQCGIKTIEELRHSLLHTTMELEQTRMVASEELIAKDDQIMQLKDLLNK 64

Query: 64  AIRERDEANEKCQTLLL-QKLLFHHQHPPPPPPPNPPPPLSAISTIDDQPRKGFDSQNAF 123
           AI+E+DEA E+ + +LL Q  L  HQ      P                      + N F
Sbjct: 65  AIKEKDEAQERYKRILLDQNFLLQHQTDEEQDP----------------------NINGF 124

Query: 124 SSSDCDESIVSS----PEIIDWVPEKPLPEKGKLLQAVMNAGPLLHTLLLAGPLPQWRHP 183
            SSD +ESIVSS     EI    PE  LPEKGKLL+AV+ AGPLL TLLLAG LPQWRHP
Sbjct: 125 HSSDGEESIVSSFEPPVEIELDFPEMTLPEKGKLLKAVVKAGPLLQTLLLAGQLPQWRHP 184

Query: 184 PPPLESFHLPPVTIPLPPLLPSLADTNCG-IVNKKRALSLCEDSDSQTATKFQRLV 232
           PP LESF +PPV I        L+  +CG  +N+KR        DS+  TK+QRL+
Sbjct: 185 PPQLESFEIPPVIIAEG---SPLSQDSCGNNLNRKRV-----HCDSKRETKYQRLL 210

[Close]

BLAST of Carg12299 vs. TAIR 10
Match: AT2G28690.1 (Protein of unknown function (DUF1635) )

HSP 1 Score: 84.0 bits (206), Expect = 1.8e-16
Identity = 66/188 (35.11%), Postives = 99/188 (52.66%), Query Frame = 0


Query: 11  WAYFLQTKNVDELRHSLLCTTLELEQTKITVQEELNKKDDQLLHLKNLLNQAIRERDEAN 70
           W Y    +++DELR  L  ++ ELE  K    EE     +++ +L +LL  A +ERDEA 
Sbjct: 8   WFY---QESMDELRQKLQYSSFELEAVKAKANEETKLHQEEVKNLLHLLKLARQERDEAK 67

Query: 71  EKCQTLLLQK----LLFHHQHPPPPPPP-NPPPPLSAISTIDDQP----RKGFDSQNAFS 130
           ++ Q LL  K    +   + H   P      P   S  S  +  P    +  F ++    
Sbjct: 68  DQLQKLLTIKTNSSITESNSHGSSPVDSFFEPVSSSEFSNFNMVPEPINQVKFKNRQQLV 127

Query: 131 SSDCDESIVSSPEIIDWVPEKPLPEKGKLLQAVMNAGPLLHTLLLAGPLPQWRHPPPPLE 190
           + +  +       + + +  K LPEKGKLLQ VM +GPLL TLL+AGPLP+WR+PPP  +
Sbjct: 128 NRNLKKIDPVDALMDEIIKGKALPEKGKLLQTVMESGPLLQTLLVAGPLPRWRNPPPLQQ 187

[Close]

BLAST of Carg12299 vs. TAIR 10
Match: AT5G59760.1 (Protein of unknown function (DUF1635) )

HSP 1 Score: 75.5 bits (184), Expect = 6.4e-14
Identity = 65/198 (32.83%), Postives = 96/198 (48.48%), Query Frame = 0


Query: 8   VLTWAYFLQTKNVDELRHSLLCTTLELEQTKITVQEELNKKDDQLLHLKNLLNQAIRERD 67
           VL  + +L  +++DE+R +L  T  ELE  K+   E+     +++  L NLL    +ERD
Sbjct: 3   VLYSSNWLHQESIDEMRQNLQSTLFELETLKMEANEKSRTHREEVNQLLNLLKFTQQERD 62

Query: 68  EANEKCQTLLLQKLLFHHQHPP--------------PPPPPNPPPPLSAISTIDDQPRKG 127
           EA ++     L + +FH Q  P                   +    LS    I  QP   
Sbjct: 63  EARQQ-----LSQFIFHTQQNPNSRSLTKSNSFSHSQDVSSSSSSELSTFLNIHPQPLTN 122

Query: 128 FDSQNAFSSSDCDESIVSSPEIIDWVPEKPLPEKGKLLQAVMNAGPLLHTLLLAGPLPQW 187
            +   A +        +   +++  V  K  PE GKLL+AV+ AGPLL TLLLAGPLP+W
Sbjct: 123 LEDPTAHN----HHQQIDPLDVL--VMGKAFPETGKLLKAVVEAGPLLETLLLAGPLPKW 182

Query: 188 RHPPPPLES--FHLPPVT 190
            +PPP  +S  F LP ++
Sbjct: 183 INPPPQTQSQRFELPSIS 189

The following BLAST results are available for this feature:

BLAST of Carg12299 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7036856.1	8.1e-128	100.00	hypothetical protein SDJN02_00476 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022948979.1	1.4e-124	98.71	uncharacterized protein LOC111452463 [Cucurbita moschata] >KAG6607168.1 hypothet...	[more]
XP_022998894.1	4.6e-123	97.42	uncharacterized protein LOC111493418 [Cucurbita maxima]	[more]
XP_023525552.1	1.5e-121	97.00	uncharacterized protein LOC111789130 [Cucurbita pepo subsp. pepo]	[more]
XP_008463249.1	3.7e-88	73.47	PREDICTED: arp2/3 complex-activating protein rickA [Cucumis melo]	[more]

BLAST of Carg12299 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg12299 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GBI0	6.9e-125	98.71	uncharacterized protein LOC111452463 OS=Cucurbita moschata OX=3662 GN=LOC1114524...	[more]
A0A6J1KFK7	2.2e-123	97.42	uncharacterized protein LOC111493418 OS=Cucurbita maxima OX=3661 GN=LOC111493418...	[more]
A0A1S3CKC5	1.8e-88	73.47	arp2/3 complex-activating protein rickA OS=Cucumis melo OX=3656 GN=LOC103501451 ...	[more]
A0A0A0LS86	2.2e-86	71.43	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G097650 PE=4 SV=1	[more]
A0A5A7V2S7	1.0e-80	70.20	Arp2/3 complex-activating protein rickA OS=Cucumis melo var. makuwa OX=1194695 G...	[more]

BLAST of Carg12299 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G22930.1	2.5e-50	47.04	Protein of unknown function (DUF1635)	[more]
AT3G44940.1	2.7e-49	47.27	Protein of unknown function (DUF1635)	[more]
AT2G28140.1	3.4e-39	47.03	Protein of unknown function (DUF1635)	[more]
AT2G28690.1	1.8e-16	35.11	Protein of unknown function (DUF1635)	[more]
AT5G59760.1	6.4e-14	32.83	Protein of unknown function (DUF1635)	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 45..79
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 85..103
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 84..125
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 110..125
None	No IPR available	PANTHER	PTHR33431:SF16	SUBFAMILY NOT NAMED	coord: 1..233
IPR012862	Protein of unknown function DUF1635	PFAM	PF07795	DUF1635	coord: 18..230 e-value: 7.8E-74 score: 248.3
IPR012862	Protein of unknown function DUF1635	PANTHER	PTHR33431	ENABLED-LIKE PROTEIN (DUF1635)	coord: 1..233

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg12299-RA	Carg12299-RA	mRNA