Carg12285 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg12285
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	P-loop NTPase domain-containing protein LPA1-like protein 1-like
Location	Carg_Chr01: 2695987 .. 2697746 (+)
RNA-Seq Expression	Carg12285
Synteny	Carg12285

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAGAAAACAAAACTCGAAAATCAAAATCCATGGAGGTTTTGCGCCGAACCATGGCAACGACTGAGCCAAATCCAGAGCTCGCTTCTTTTGGTCTTTAATGGTGTGAATACGGCTTCGTTTCTGTCCAATGCGTGATCGTTATGTCGTTTTCATTGCCCTAGGCCTCTTCTTCAATCTATAGTTGAGATTTGATTCCATACTTTTTCCTTTTTGCTTGCGACGTCTTCAGCCTTTTGATTCACTACGGATTTTGCATTTTTGCAGGTTTGACTTGCTGTTTCTCTATTTTTTTGTGTATCCACATTTTGTTGTGTTGTTGTTATAATTTTTTGGCGTTGATTTGATGCAATGACGTTCCGTCCATCGCTTTCTTCGTTTGTTTATTGTTTGATCGTGATAGCCGCTCTTCCGATTTTTTTATTTTTTAATTGGACATCTGAGTGAGGGTTTATCTTCTTTAAATTAGTATAGATGCAATCATGGAAATTGGTTTACTACGGACAGGAATGGCGGAGGTTGCGAAATTGCTGTACATAGTTGTGGTGGATGAGGGAGAAAAGCTAGAGAAGGAGAAAGGATCTTTCAGGTACACTCGTCATGTTCTACAGAGTACTCTACAGCTTATGGGATGCAAACCGCGACATGCTTTCAAGGTATGCTTGTTTTCTTTTTTCAATCATACTTCCGGATTCCATGCGAAATCCTCTGGAAGATTTTCTAATGTTTTTTTAGCAGTTCAATTTTTCTATATTTTCTCATTTTAGAGGTTTGAGTTTTATGAAAAGAAGTTCATCTTCAATGGGCTTGTTCAGCTCTGTGATTGCAGCATTACCTGGGAATAATTTCGTATGAACTTGGAGTCTAGTTGTTACCATGATAATCCTGCGTTATATTGTTGTATAGATTAAGTAATGGGAATAAACTTTCTAATATGGCCTGCAAGGAAATGGATGAGAAATTCAAACTGATGGTCACCCAAATCTAATATTCTTGTTTAATCATTGAGATTGTCTGATAATAAACATGTTTCTGATAGGAAGCTGAACATAAGATTGAAGTATCTTATGTCAGGTTCCAATCAGTTTCACGGCTTAGAGATAGTAGATTGTGAATGCCCATTCACCCATTATACCTTTGTCAGGTTTTTTCTTTTGATTTTCTCTACCTTTGTTTCACTCCTTGAGCAAATCTTTTTATTTATTTGCGTTCAAGATGTTGGGTGGATTGGCAATTGGCGTTTCCTTAATTTCCTTTGTTGTTATGTTTTTTCTGTTTTTTCTACAATCTTTTCTTTTTGTTGTTTCCATTTGAAAGCCATACATCCTTCACACAAATCGAATGAAATTTCTGCTGAAAGAGTTTGGTTTTTTCTGAATGTGCTCTTTTGTGGTCAGATAAGCAAATGGGTATTTGAATTGATAAGAAAGGAAGCTTCGACTGATGTTTTTCTCCCTGAAGAGAGTGACATATTGGGATTGGTTTCTTTGGTTGGACAAGGACAAAGTGAAAAAGATACTGATTATTACCATAATTGTTTTGATGGAAATGAGATTTTTGAAAATTTGGGTTCAAGAGAAGGTGATAATAGCAAGAATATTCCATTCGAGTTATATAAAAAAAGCAGGACTGCTGTTGTTAAAAGAGAAACTTTCCTAGATGTTATTTGTGATTCTCTGGCTAAGTACAAGTACGTCGGTCCCAACCAGAGGGCAGACCTGATCTTGGCATGCAGGTACTTAAAACATCTCAATTTTTAG

mRNA sequence

AAAAAGAAAACAAAACTCGAAAATCAAAATCCATGGAGGTTTTGCGCCGAACCATGGCAACGACTGAGCCAAATCCAGAGCTCGCTTCTTTTGGTCTTTAATGGTGTGAATACGGCTTCGTTTCTGTCCAATGCGTGATCGTTATGTCGTTTTCATTGCCCTAGGCCTCTTCTTCAATCTATAGTTTGACTTGCTGTTTCTCTATTTTTTTGTGTATCCACATTTTGTTGTGTTGTTGTTATAATTTTTTGGCGTTGATTTGATGCAATGACGTTCCGTCCATCGCTTTCTTCGTTTGTTTATTGTTTGATCGTGATAGCCGCTCTTCCGATTTTTTTATTTTTTAATTGGACATCTGAGTGAGGGTTTATCTTCTTTAAATTAGTATAGATGCAATCATGGAAATTGGTTTACTACGGACAGGAATGGCGGAGGTTGCGAAATTGCTGTACATAGTTGTGGTGGATGAGGGAGAAAAGCTAGAGAAGGAGAAAGGATCTTTCAGGTACACTCGTCATGTTCTACAGAGTACTCTACAGCTTATGGGATGCAAACCGCGACATGCTTTCAAGATAAGCAAATGGGTATTTGAATTGATAAGAAAGGAAGCTTCGACTGATGTTTTTCTCCCTGAAGAGAGTGACATATTGGGATTGGTTTCTTTGGTTGGACAAGGACAAAGTGAAAAAGATACTGATTATTACCATAATTGTTTTGATGGAAATGAGATTTTTGAAAATTTGGGTTCAAGAGAAGGTGATAATAGCAAGAATATTCCATTCGAGTTATATAAAAAAAGCAGGACTGCTGTTGTTAAAAGAGAAACTTTCCTAGATGTTATTTGTGATTCTCTGGCTAAGTACAAGTACGTCGGTCCCAACCAGAGGGCAGACCTGATCTTGGCATGCAGGTACTTAAAACATCTCAATTTTTAG

Coding sequence (CDS)

ATGGAAATTGGTTTACTACGGACAGGAATGGCGGAGGTTGCGAAATTGCTGTACATAGTTGTGGTGGATGAGGGAGAAAAGCTAGAGAAGGAGAAAGGATCTTTCAGGTACACTCGTCATGTTCTACAGAGTACTCTACAGCTTATGGGATGCAAACCGCGACATGCTTTCAAGATAAGCAAATGGGTATTTGAATTGATAAGAAAGGAAGCTTCGACTGATGTTTTTCTCCCTGAAGAGAGTGACATATTGGGATTGGTTTCTTTGGTTGGACAAGGACAAAGTGAAAAAGATACTGATTATTACCATAATTGTTTTGATGGAAATGAGATTTTTGAAAATTTGGGTTCAAGAGAAGGTGATAATAGCAAGAATATTCCATTCGAGTTATATAAAAAAAGCAGGACTGCTGTTGTTAAAAGAGAAACTTTCCTAGATGTTATTTGTGATTCTCTGGCTAAGTACAAGTACGTCGGTCCCAACCAGAGGGCAGACCTGATCTTGGCATGCAGGTACTTAAAACATCTCAATTTTTAG

Protein sequence

MEIGLLRTGMAEVAKLLYIVVVDEGEKLEKEKGSFRYTRHVLQSTLQLMGCKPRHAFKISKWVFELIRKEASTDVFLPEESDILGLVSLVGQGQSEKDTDYYHNCFDGNEIFENLGSREGDNSKNIPFELYKKSRTAVVKRETFLDVICDSLAKYKYVGPNQRADLILACRYLKHLNF

Homology

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BLAST of Carg12285 vs. NCBI nr
Match: KAG7036842.1 (P-loop NTPase domain-containing protein LPA1-like 1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 362.5 bits (929), Expect = 2.1e-96
Identity = 178/178 (100.00%), Postives = 178/178 (100.00%), Query Frame = 0


Query: 1   MEIGLLRTGMAEVAKLLYIVVVDEGEKLEKEKGSFRYTRHVLQSTLQLMGCKPRHAFKIS 60
           MEIGLLRTGMAEVAKLLYIVVVDEGEKLEKEKGSFRYTRHVLQSTLQLMGCKPRHAFKIS
Sbjct: 1   MEIGLLRTGMAEVAKLLYIVVVDEGEKLEKEKGSFRYTRHVLQSTLQLMGCKPRHAFKIS 60

Query: 61  KWVFELIRKEASTDVFLPEESDILGLVSLVGQGQSEKDTDYYHNCFDGNEIFENLGSREG 120
           KWVFELIRKEASTDVFLPEESDILGLVSLVGQGQSEKDTDYYHNCFDGNEIFENLGSREG
Sbjct: 61  KWVFELIRKEASTDVFLPEESDILGLVSLVGQGQSEKDTDYYHNCFDGNEIFENLGSREG 120

Query: 121 DNSKNIPFELYKKSRTAVVKRETFLDVICDSLAKYKYVGPNQRADLILACRYLKHLNF 179
           DNSKNIPFELYKKSRTAVVKRETFLDVICDSLAKYKYVGPNQRADLILACRYLKHLNF
Sbjct: 121 DNSKNIPFELYKKSRTAVVKRETFLDVICDSLAKYKYVGPNQRADLILACRYLKHLNF 178

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BLAST of Carg12285 vs. NCBI nr
Match: XP_022948849.1 (P-loop NTPase domain-containing protein LPA1 homolog 1-like isoform X1 [Cucurbita moschata] >XP_022948850.1 P-loop NTPase domain-containing protein LPA1 homolog 1-like isoform X1 [Cucurbita moschata] >XP_022948851.1 P-loop NTPase domain-containing protein LPA1 homolog 1-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 344.7 bits (883), Expect = 4.6e-91
Identity = 170/171 (99.42%), Postives = 170/171 (99.42%), Query Frame = 0


Query: 1   MEIGLLRTGMAEVAKLLYIVVVDEGEKLEKEKGSFRYTRHVLQSTLQLMGCKPRHAFKIS 60
           MEIGLLRTGMAEVAKLLYIVVVDEGEKLEKEKGSFRYTRHVLQSTLQLMGCKPRHAFKIS
Sbjct: 1   MEIGLLRTGMAEVAKLLYIVVVDEGEKLEKEKGSFRYTRHVLQSTLQLMGCKPRHAFKIS 60

Query: 61  KWVFELIRKEASTDVFLPEESDILGLVSLVGQGQSEKDTDYYHNCFDGNEIFENLGSREG 120
           KWVFELIRKEASTDVFLPEESDILGLVSLVGQGQSEKDTDYYHNCFDGNEIFENLGSREG
Sbjct: 61  KWVFELIRKEASTDVFLPEESDILGLVSLVGQGQSEKDTDYYHNCFDGNEIFENLGSREG 120

Query: 121 DNSKNIPFELYKKSRTAVVKRETFLDVICDSLAKYKYVGPNQRADLILACR 172
           DNSKNIPFELYKKSRTAVVKRETFLDVICDSLA YKYVGPNQRADLILACR
Sbjct: 121 DNSKNIPFELYKKSRTAVVKRETFLDVICDSLATYKYVGPNQRADLILACR 171

[Close]

BLAST of Carg12285 vs. NCBI nr
Match: XP_022998859.1 (P-loop NTPase domain-containing protein LPA1 homolog 1-like isoform X1 [Cucurbita maxima] >XP_022998860.1 P-loop NTPase domain-containing protein LPA1 homolog 1-like isoform X1 [Cucurbita maxima] >XP_022998861.1 P-loop NTPase domain-containing protein LPA1 homolog 1-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 340.1 bits (871), Expect = 1.1e-89
Identity = 167/171 (97.66%), Postives = 169/171 (98.83%), Query Frame = 0


Query: 1   MEIGLLRTGMAEVAKLLYIVVVDEGEKLEKEKGSFRYTRHVLQSTLQLMGCKPRHAFKIS 60
           MEIGLLRTGMAEVAKLLYIVVVDEGEKLEKEKGSFRYTRHVLQSTLQLMGCKPRHAFKIS
Sbjct: 1   MEIGLLRTGMAEVAKLLYIVVVDEGEKLEKEKGSFRYTRHVLQSTLQLMGCKPRHAFKIS 60

Query: 61  KWVFELIRKEASTDVFLPEESDILGLVSLVGQGQSEKDTDYYHNCFDGNEIFENLGSREG 120
           KWVFELIRKEASTDVFLPE+SDILGLVSLVGQGQSE DTDYYHNCFDG EIF+NLGSREG
Sbjct: 61  KWVFELIRKEASTDVFLPEKSDILGLVSLVGQGQSENDTDYYHNCFDGKEIFDNLGSREG 120

Query: 121 DNSKNIPFELYKKSRTAVVKRETFLDVICDSLAKYKYVGPNQRADLILACR 172
           DNSKNIPFELYKKSRTAVVKRETFLDVICDSLAKYKYVGPNQRADLILACR
Sbjct: 121 DNSKNIPFELYKKSRTAVVKRETFLDVICDSLAKYKYVGPNQRADLILACR 171

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BLAST of Carg12285 vs. NCBI nr
Match: KAG6607154.1 (P-loop NTPase domain-containing protein LPA1-like 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 332.8 bits (852), Expect = 1.8e-87
Identity = 163/163 (100.00%), Postives = 163/163 (100.00%), Query Frame = 0


Query: 9   GMAEVAKLLYIVVVDEGEKLEKEKGSFRYTRHVLQSTLQLMGCKPRHAFKISKWVFELIR 68
           GMAEVAKLLYIVVVDEGEKLEKEKGSFRYTRHVLQSTLQLMGCKPRHAFKISKWVFELIR
Sbjct: 47  GMAEVAKLLYIVVVDEGEKLEKEKGSFRYTRHVLQSTLQLMGCKPRHAFKISKWVFELIR 106

Query: 69  KEASTDVFLPEESDILGLVSLVGQGQSEKDTDYYHNCFDGNEIFENLGSREGDNSKNIPF 128
           KEASTDVFLPEESDILGLVSLVGQGQSEKDTDYYHNCFDGNEIFENLGSREGDNSKNIPF
Sbjct: 107 KEASTDVFLPEESDILGLVSLVGQGQSEKDTDYYHNCFDGNEIFENLGSREGDNSKNIPF 166

Query: 129 ELYKKSRTAVVKRETFLDVICDSLAKYKYVGPNQRADLILACR 172
           ELYKKSRTAVVKRETFLDVICDSLAKYKYVGPNQRADLILACR
Sbjct: 167 ELYKKSRTAVVKRETFLDVICDSLAKYKYVGPNQRADLILACR 209

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BLAST of Carg12285 vs. NCBI nr
Match: XP_023523962.1 (LOW QUALITY PROTEIN: P-loop NTPase domain-containing protein LPA1 homolog 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 330.1 bits (845), Expect = 1.2e-86
Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0


Query: 10  MAEVAKLLYIVVVDEGEKLEKEKGSFRYTRHVLQSTLQLMGCKPRHAFKISKWVFELIRK 69
           MAEVAKLLYIVVVDEGEKLEKEKGSFRYTRHVLQSTLQLMGCKPRHAFKISKWVFELIRK
Sbjct: 1   MAEVAKLLYIVVVDEGEKLEKEKGSFRYTRHVLQSTLQLMGCKPRHAFKISKWVFELIRK 60

Query: 70  EASTDVFLPEESDILGLVSLVGQGQSEKDTDYYHNCFDGNEIFENLGSREGDNSKNIPFE 129
           EASTDVFLPEESDILGLVSLVGQGQSEKDTDYYHNCFDGNEIFENLGSREGDNSKNIPFE
Sbjct: 61  EASTDVFLPEESDILGLVSLVGQGQSEKDTDYYHNCFDGNEIFENLGSREGDNSKNIPFE 120

Query: 130 LYKKSRTAVVKRETFLDVICDSLAKYKYVGPNQRADLILACR 172
           LYKKSRTAVVKRETFLDVICDSLAKYKYVGPNQRADLILACR
Sbjct: 121 LYKKSRTAVVKRETFLDVICDSLAKYKYVGPNQRADLILACR 162

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BLAST of Carg12285 vs. ExPASy Swiss-Prot
Match: Q9FJH9 (P-loop NTPase domain-containing protein LPA1 homolog 1 OS=Arabidopsis thaliana OX=3702 GN=At5g60760 PE=2 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 3.5e-33
Identity = 86/170 (50.59%), Postives = 109/170 (64.12%), Query Frame = 0


Query: 10  MAEVAKLLYIVVV---DEGEKLEKE-----KGSFRYTRHVLQSTLQLMGCKPRHAFKISK 69
           M E  K++YIVVV   D  E +E++     K SFRYTR VLQSTLQLMGCK RHAFKIS+
Sbjct: 1   MTETTKVMYIVVVDGTDTAETVEEDGTGTWKDSFRYTRPVLQSTLQLMGCKARHAFKISR 60

Query: 70  WVFELIRKEASTDVFLPEESDILGLVSLVGQGQSEKDTDYYHNCFDGNEIFENLGSREGD 129
            VFELIR E S  +  P  S      S   + Q   D     N    N++  +L + + D
Sbjct: 61  RVFELIRSEGSL-ILSPSLSP---SHSKESEFQKTGDASACANVEKANKV-NSLATDDVD 120

Query: 130 NSKNIPFELYKKSRTAVVKRETFLDVICDSLAKYKYVGPNQRADLILACR 172
            SK+ PFE+YK+  T VV RE F++V+CD+LA+YKYVG +QRADLIL+CR
Sbjct: 121 KSKSKPFEVYKRRTTVVVSREIFVNVVCDALAEYKYVGHDQRADLILSCR 165

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BLAST of Carg12285 vs. ExPASy Swiss-Prot
Match: Q93ZS1 (P-loop NTPase domain-containing protein LPA1 homolog 2 OS=Arabidopsis thaliana OX=3702 GN=At3g45090 PE=2 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 6.0e-33
Identity = 83/163 (50.92%), Postives = 102/163 (62.58%), Query Frame = 0


Query: 10  MAEVAKLLYIVVVDEGEKLEKE-KGSFRYTRHVLQSTLQLMGCKPRHAFKISKWVFELIR 69
           M E  K+LYIVV +EG+  +     SFRYTR VLQSTLQLMGCK RHAFKIS+ VFELIR
Sbjct: 2   MTEATKVLYIVVREEGDDDDNNGDDSFRYTRPVLQSTLQLMGCKARHAFKISRRVFELIR 61

Query: 70  KEASTDVFLPEESDILGLVSLVGQGQSEKDTDYYHNCFDGNEIFENLGSREGDNSKNIPF 129
            E S +   PE          VG     +      NC         + + + D +K+ PF
Sbjct: 62  SEGSCNT-SPENGKEPEFAKEVGGSTCVEKL----NCL--------VVAGDVDKNKSKPF 121

Query: 130 ELYKKSRTAVVKRETFLDVICDSLAKYKYVGPNQRADLILACR 172
           E+YK+  T VV RE F+DV+CD+LA+YKYVG +QRADLILACR
Sbjct: 122 EMYKRRTTVVVSREIFVDVVCDALAEYKYVGRDQRADLILACR 151

[Close]

BLAST of Carg12285 vs. ExPASy Swiss-Prot
Match: B9F4I8 (P-loop NTPase domain-containing protein LPA1 OS=Oryza sativa subsp. japonica OX=39947 GN=LPA1 PE=2 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 2.4e-26
Identity = 77/160 (48.12%), Postives = 90/160 (56.25%), Query Frame = 0


Query: 15  KLLYIVVVDEGEKLEKEKGSFRYTRHVLQSTLQLMGCKPRHAFKISKWVFELIRKE---A 74
           KLLYI V D        + +FRYTR VLQ TLQLMGCK RHAFKISK VF ++R E   A
Sbjct: 42  KLLYIAVSDAA-----ARRAFRYTRPVLQGTLQLMGCKARHAFKISKRVFNVMRSEFLDA 101

Query: 75  STDVFLPEESDILGLVSLVGQGQSEKDTDYYHNCFDGNEIFENLGSREGDNSKNIPFELY 134
           S       E +   LV         KD +         +I E   S       +IPFELY
Sbjct: 102 SKSDTADNEENAPSLV---------KDVEMLK-----PKILEATLS-------SIPFELY 161

Query: 135 KKSRTAVVKRETFLDVICDSLAKYKYVGPNQRADLILACR 172
           K   T VV RE FL V+CD+L+ YKYVGPNQ+AD +LACR
Sbjct: 162 KTQTTIVVSREKFLSVVCDALSSYKYVGPNQKADFLLACR 175

[Close]

BLAST of Carg12285 vs. ExPASy Swiss-Prot
Match: Q651A1 (P-loop NTPase domain-containing protein LPA1 homolog OS=Oryza sativa subsp. japonica OX=39947 GN=Os09g0572200 PE=3 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 1.2e-22
Identity = 65/157 (41.40%), Postives = 86/157 (54.78%), Query Frame = 0


Query: 15  KLLYIVVVDEGEKLEKEKGSFRYTRHVLQSTLQLMGCKPRHAFKISKWVFELIRKEASTD 74
           KLLYIVVVD+      +  +FRYTR +L STLQLMGCKPRHAF+IS  VF+ IR     D
Sbjct: 11  KLLYIVVVDD------DGATFRYTRSLLHSTLQLMGCKPRHAFEISGRVFDEIRGHMGGD 70

Query: 75  VFLPEESDILGLVSLVGQGQSEKDTDYYHNCFDGNEIFENLGSREGDNSKNIPFELYKKS 134
                       +++ G G              G + +E     E  + +   FELYK+ 
Sbjct: 71  ------------MAMGGGG--------------GVQRYELAADAEAASPRQFQFELYKRR 130

Query: 135 RTAVVKRETFLDVICDSLAKYKYVGPNQRADLILACR 172
            T ++ R  FL ++C +LA YKYV P+QR+DL  ACR
Sbjct: 131 TTLLIPRPLFLRLVCHALALYKYVAPDQRSDLHRACR 135

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BLAST of Carg12285 vs. ExPASy TrEMBL
Match: A0A6J1GAC9 (P-loop NTPase domain-containing protein LPA1 homolog 1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111452390 PE=4 SV=1)

HSP 1 Score: 344.7 bits (883), Expect = 2.2e-91
Identity = 170/171 (99.42%), Postives = 170/171 (99.42%), Query Frame = 0


Query: 1   MEIGLLRTGMAEVAKLLYIVVVDEGEKLEKEKGSFRYTRHVLQSTLQLMGCKPRHAFKIS 60
           MEIGLLRTGMAEVAKLLYIVVVDEGEKLEKEKGSFRYTRHVLQSTLQLMGCKPRHAFKIS
Sbjct: 1   MEIGLLRTGMAEVAKLLYIVVVDEGEKLEKEKGSFRYTRHVLQSTLQLMGCKPRHAFKIS 60

Query: 61  KWVFELIRKEASTDVFLPEESDILGLVSLVGQGQSEKDTDYYHNCFDGNEIFENLGSREG 120
           KWVFELIRKEASTDVFLPEESDILGLVSLVGQGQSEKDTDYYHNCFDGNEIFENLGSREG
Sbjct: 61  KWVFELIRKEASTDVFLPEESDILGLVSLVGQGQSEKDTDYYHNCFDGNEIFENLGSREG 120

Query: 121 DNSKNIPFELYKKSRTAVVKRETFLDVICDSLAKYKYVGPNQRADLILACR 172
           DNSKNIPFELYKKSRTAVVKRETFLDVICDSLA YKYVGPNQRADLILACR
Sbjct: 121 DNSKNIPFELYKKSRTAVVKRETFLDVICDSLATYKYVGPNQRADLILACR 171

[Close]

BLAST of Carg12285 vs. ExPASy TrEMBL
Match: A0A6J1KFH4 (P-loop NTPase domain-containing protein LPA1 homolog 1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111493391 PE=4 SV=1)

HSP 1 Score: 340.1 bits (871), Expect = 5.5e-90
Identity = 167/171 (97.66%), Postives = 169/171 (98.83%), Query Frame = 0


Query: 1   MEIGLLRTGMAEVAKLLYIVVVDEGEKLEKEKGSFRYTRHVLQSTLQLMGCKPRHAFKIS 60
           MEIGLLRTGMAEVAKLLYIVVVDEGEKLEKEKGSFRYTRHVLQSTLQLMGCKPRHAFKIS
Sbjct: 1   MEIGLLRTGMAEVAKLLYIVVVDEGEKLEKEKGSFRYTRHVLQSTLQLMGCKPRHAFKIS 60

Query: 61  KWVFELIRKEASTDVFLPEESDILGLVSLVGQGQSEKDTDYYHNCFDGNEIFENLGSREG 120
           KWVFELIRKEASTDVFLPE+SDILGLVSLVGQGQSE DTDYYHNCFDG EIF+NLGSREG
Sbjct: 61  KWVFELIRKEASTDVFLPEKSDILGLVSLVGQGQSENDTDYYHNCFDGKEIFDNLGSREG 120

Query: 121 DNSKNIPFELYKKSRTAVVKRETFLDVICDSLAKYKYVGPNQRADLILACR 172
           DNSKNIPFELYKKSRTAVVKRETFLDVICDSLAKYKYVGPNQRADLILACR
Sbjct: 121 DNSKNIPFELYKKSRTAVVKRETFLDVICDSLAKYKYVGPNQRADLILACR 171

[Close]

BLAST of Carg12285 vs. ExPASy TrEMBL
Match: A0A6J1GAE4 (P-loop NTPase domain-containing protein LPA1 homolog 1-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111452390 PE=4 SV=1)

HSP 1 Score: 327.8 bits (839), Expect = 2.8e-86
Identity = 161/162 (99.38%), Postives = 161/162 (99.38%), Query Frame = 0


Query: 10  MAEVAKLLYIVVVDEGEKLEKEKGSFRYTRHVLQSTLQLMGCKPRHAFKISKWVFELIRK 69
           MAEVAKLLYIVVVDEGEKLEKEKGSFRYTRHVLQSTLQLMGCKPRHAFKISKWVFELIRK
Sbjct: 1   MAEVAKLLYIVVVDEGEKLEKEKGSFRYTRHVLQSTLQLMGCKPRHAFKISKWVFELIRK 60

Query: 70  EASTDVFLPEESDILGLVSLVGQGQSEKDTDYYHNCFDGNEIFENLGSREGDNSKNIPFE 129
           EASTDVFLPEESDILGLVSLVGQGQSEKDTDYYHNCFDGNEIFENLGSREGDNSKNIPFE
Sbjct: 61  EASTDVFLPEESDILGLVSLVGQGQSEKDTDYYHNCFDGNEIFENLGSREGDNSKNIPFE 120

Query: 130 LYKKSRTAVVKRETFLDVICDSLAKYKYVGPNQRADLILACR 172
           LYKKSRTAVVKRETFLDVICDSLA YKYVGPNQRADLILACR
Sbjct: 121 LYKKSRTAVVKRETFLDVICDSLATYKYVGPNQRADLILACR 162

[Close]

BLAST of Carg12285 vs. ExPASy TrEMBL
Match: A0A6J1K959 (P-loop NTPase domain-containing protein LPA1 homolog 1-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111493391 PE=4 SV=1)

HSP 1 Score: 323.2 bits (827), Expect = 7.0e-85
Identity = 158/162 (97.53%), Postives = 160/162 (98.77%), Query Frame = 0


Query: 10  MAEVAKLLYIVVVDEGEKLEKEKGSFRYTRHVLQSTLQLMGCKPRHAFKISKWVFELIRK 69
           MAEVAKLLYIVVVDEGEKLEKEKGSFRYTRHVLQSTLQLMGCKPRHAFKISKWVFELIRK
Sbjct: 1   MAEVAKLLYIVVVDEGEKLEKEKGSFRYTRHVLQSTLQLMGCKPRHAFKISKWVFELIRK 60

Query: 70  EASTDVFLPEESDILGLVSLVGQGQSEKDTDYYHNCFDGNEIFENLGSREGDNSKNIPFE 129
           EASTDVFLPE+SDILGLVSLVGQGQSE DTDYYHNCFDG EIF+NLGSREGDNSKNIPFE
Sbjct: 61  EASTDVFLPEKSDILGLVSLVGQGQSENDTDYYHNCFDGKEIFDNLGSREGDNSKNIPFE 120

Query: 130 LYKKSRTAVVKRETFLDVICDSLAKYKYVGPNQRADLILACR 172
           LYKKSRTAVVKRETFLDVICDSLAKYKYVGPNQRADLILACR
Sbjct: 121 LYKKSRTAVVKRETFLDVICDSLAKYKYVGPNQRADLILACR 162

[Close]

BLAST of Carg12285 vs. ExPASy TrEMBL
Match: A0A1S3CSE2 (P-loop NTPase domain-containing protein LPA1 homolog 2-like OS=Cucumis melo OX=3656 GN=LOC103504181 PE=4 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 4.1e-69
Identity = 138/167 (82.63%), Postives = 147/167 (88.02%), Query Frame = 0


Query: 8   TGMAEVAKLLYIVVVDEGEKLEKEKGSFRYTRHVLQSTLQLMGCKPRHAFKISKWVFELI 67
           TGMAEVAKLLYIVVVDE EK EKEK SFRYTRHVLQSTLQLMGCKPRHAFKISKWVFELI
Sbjct: 39  TGMAEVAKLLYIVVVDEEEKPEKEKTSFRYTRHVLQSTLQLMGCKPRHAFKISKWVFELI 98

Query: 68  RKEASTDVFLPEESDILGLVSLVGQGQSEKDTDYYHNCFDGNEIFENLGSREGDNSKNIP 127
           RKEAST+ FLPEE ++LG +SL   G +E D + Y+NC DG E F N GSREGDNS NIP
Sbjct: 99  RKEASTENFLPEEWNVLGSISL--GGNTESDGNQYYNCLDGKETF-NQGSREGDNSNNIP 158

Query: 128 FELYKKSRTAVVKRETFLDVICDSLAKYKYVGPNQRADLILACRYLK 175
           FELYK+SRTAVV RE+FLDVICDSLAKYKYVGPNQRADLILACRYLK
Sbjct: 159 FELYKRSRTAVVGRESFLDVICDSLAKYKYVGPNQRADLILACRYLK 202

[Close]

BLAST of Carg12285 vs. TAIR 10
Match: AT5G60760.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 142.9 bits (359), Expect = 2.5e-34
Identity = 86/170 (50.59%), Postives = 109/170 (64.12%), Query Frame = 0


Query: 10  MAEVAKLLYIVVV---DEGEKLEKE-----KGSFRYTRHVLQSTLQLMGCKPRHAFKISK 69
           M E  K++YIVVV   D  E +E++     K SFRYTR VLQSTLQLMGCK RHAFKIS+
Sbjct: 1   MTETTKVMYIVVVDGTDTAETVEEDGTGTWKDSFRYTRPVLQSTLQLMGCKARHAFKISR 60

Query: 70  WVFELIRKEASTDVFLPEESDILGLVSLVGQGQSEKDTDYYHNCFDGNEIFENLGSREGD 129
            VFELIR E S  +  P  S      S   + Q   D     N    N++  +L + + D
Sbjct: 61  RVFELIRSEGSL-ILSPSLSP---SHSKESEFQKTGDASACANVEKANKV-NSLATDDVD 120

Query: 130 NSKNIPFELYKKSRTAVVKRETFLDVICDSLAKYKYVGPNQRADLILACR 172
            SK+ PFE+YK+  T VV RE F++V+CD+LA+YKYVG +QRADLIL+CR
Sbjct: 121 KSKSKPFEVYKRRTTVVVSREIFVNVVCDALAEYKYVGHDQRADLILSCR 165

[Close]

BLAST of Carg12285 vs. TAIR 10
Match: AT3G45090.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 142.1 bits (357), Expect = 4.2e-34
Identity = 83/163 (50.92%), Postives = 102/163 (62.58%), Query Frame = 0


Query: 10  MAEVAKLLYIVVVDEGEKLEKE-KGSFRYTRHVLQSTLQLMGCKPRHAFKISKWVFELIR 69
           M E  K+LYIVV +EG+  +     SFRYTR VLQSTLQLMGCK RHAFKIS+ VFELIR
Sbjct: 2   MTEATKVLYIVVREEGDDDDNNGDDSFRYTRPVLQSTLQLMGCKARHAFKISRRVFELIR 61

Query: 70  KEASTDVFLPEESDILGLVSLVGQGQSEKDTDYYHNCFDGNEIFENLGSREGDNSKNIPF 129
            E S +   PE          VG     +      NC         + + + D +K+ PF
Sbjct: 62  SEGSCNT-SPENGKEPEFAKEVGGSTCVEKL----NCL--------VVAGDVDKNKSKPF 121

Query: 130 ELYKKSRTAVVKRETFLDVICDSLAKYKYVGPNQRADLILACR 172
           E+YK+  T VV RE F+DV+CD+LA+YKYVG +QRADLILACR
Sbjct: 122 EMYKRRTTVVVSREIFVDVVCDALAEYKYVGRDQRADLILACR 151

[Close]

BLAST of Carg12285 vs. TAIR 10
Match: AT3G45090.2 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 82.4 bits (202), Expect = 4.0e-16
Identity = 49/112 (43.75%), Postives = 64/112 (57.14%), Query Frame = 0


Query: 60  SKWVFELIRKEASTDVFLPEESDILGLVSLVGQGQSEKDTDYYHNCFDGNEIFENLGSRE 119
           S+ VFELIR E S +   PE          VG     +      NC         + + +
Sbjct: 34  SRRVFELIRSEGSCNT-SPENGKEPEFAKEVGGSTCVEKL----NCL--------VVAGD 93

Query: 120 GDNSKNIPFELYKKSRTAVVKRETFLDVICDSLAKYKYVGPNQRADLILACR 172
            D +K+ PFE+YK+  T VV RE F+DV+CD+LA+YKYVG +QRADLILACR
Sbjct: 94  VDKNKSKPFEMYKRRTTVVVSREIFVDVVCDALAEYKYVGRDQRADLILACR 132

The following BLAST results are available for this feature:

BLAST of Carg12285 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7036842.1	2.1e-96	100.00	P-loop NTPase domain-containing protein LPA1-like 1 [Cucurbita argyrosperma subs...	[more]
XP_022948849.1	4.6e-91	99.42	P-loop NTPase domain-containing protein LPA1 homolog 1-like isoform X1 [Cucurbit...	[more]
XP_022998859.1	1.1e-89	97.66	P-loop NTPase domain-containing protein LPA1 homolog 1-like isoform X1 [Cucurbit...	[more]
KAG6607154.1	1.8e-87	100.00	P-loop NTPase domain-containing protein LPA1-like 1, partial [Cucurbita argyrosp...	[more]
XP_023523962.1	1.2e-86	100.00	LOW QUALITY PROTEIN: P-loop NTPase domain-containing protein LPA1 homolog 1-like...	[more]

BLAST of Carg12285 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FJH9	3.5e-33	50.59	P-loop NTPase domain-containing protein LPA1 homolog 1 OS=Arabidopsis thaliana O...	[more]
Q93ZS1	6.0e-33	50.92	P-loop NTPase domain-containing protein LPA1 homolog 2 OS=Arabidopsis thaliana O...	[more]
B9F4I8	2.4e-26	48.13	P-loop NTPase domain-containing protein LPA1 OS=Oryza sativa subsp. japonica OX=...	[more]
Q651A1	1.2e-22	41.40	P-loop NTPase domain-containing protein LPA1 homolog OS=Oryza sativa subsp. japo...	[more]

BLAST of Carg12285 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GAC9	2.2e-91	99.42	P-loop NTPase domain-containing protein LPA1 homolog 1-like isoform X1 OS=Cucurb...	[more]
A0A6J1KFH4	5.5e-90	97.66	P-loop NTPase domain-containing protein LPA1 homolog 1-like isoform X1 OS=Cucurb...	[more]
A0A6J1GAE4	2.8e-86	99.38	P-loop NTPase domain-containing protein LPA1 homolog 1-like isoform X2 OS=Cucurb...	[more]
A0A6J1K959	7.0e-85	97.53	P-loop NTPase domain-containing protein LPA1 homolog 1-like isoform X2 OS=Cucurb...	[more]
A0A1S3CSE2	4.1e-69	82.63	P-loop NTPase domain-containing protein LPA1 homolog 2-like OS=Cucumis melo OX=3...	[more]

BLAST of Carg12285 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G60760.1	2.5e-34	50.59	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]
AT3G45090.1	4.2e-34	50.92	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]
AT3G45090.2	4.0e-16	43.75	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33477	P-LOOP NTPASE DOMAIN-CONTAINING PROTEIN LPA1 HOMOLOG 1	coord: 10..172
None	No IPR available	PANTHER	PTHR33477:SF9	P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASE-RELATED	coord: 10..172

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg12285-RA	Carg12285-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane