Carg12277 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg12277
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionhelicase protein MOM1 isoform X3
LocationCarg_Chr01: 2628748 .. 2634412 (-)
RNA-Seq ExpressionCarg12277
SyntenyCarg12277
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCACCAAGCTTTGTGAATTTTGGCACGAGGCAAAAAATGCTGGTTGTGATTGATAATCAGGTGAGATTACACACCAATACTGCAATGTGTGGGCACAAAGTAAATTATATTGCAGTTTACTGGATATCTTTTTGAAGGTGTATCCTTTAATAGTTTTCATCATTGCAGTTTACTTGATATCATCACTAAATATGATTCAGATAACCCTAACTTTTTAGACTTGCATACAGCTGCAGTTTAAACATGGTAAATGGGAAGTATTTCATTTGAGTTTTTAGGTCTGTATTATGGCTCTATATTTATATTTCAGCTTGGTTAGGCCTGTTGGAATACTGAATAATCCTGTTAAATCCACCGAGAAAAAATGTACGGGGTCATAAAGTGAACATTATGGCATTATACTCAGTATCTAGCATTGTTGCTTGAACCAGTTGGCCATTGATTTTCTTATTTTATTTTATTTTTATTTTTTATTTTTATTTTTTATTCCGTGGAGTGTGGAGCCAGCTTTCGTGCACCTCAAGCATTTCTCATAGGACAATCGCCTGACCCTACATCTTTAGTTCCAAGGTATTTAAGTATTTATATTAAATCTTAGGTAGGGTTGCTACCATGGCTTAAATTCATTTCTTCTAAAACCTTTAATTTTTACATAACCCTTCTTGACACTAGGCCAACCTGGTGGTTAGTTGGCCATGTTTGATGGTAGAATCTTTAATGCTTCTCCTAAGATTATTGAGGATTCGAAGACCAAAATAAGATGAGGAACAGATGTTCAAGCTTGATTGAGAAAGCATTGGACAAAGTGGATCGGACTTCCTAGATGCCATCCCAAAACAAAAGGCCTTCTGAACACTTTGGAGGAAATGAATCTATGGATGCATCTCTAGTGAAAATATTCCATCATAGTTAACAGAAGATCATGTCATTCAGAGGCAAGCTTTTTCTATGGATGGCTTCAAACAGAGTGCAAAACTTTTAATTTAATTGTGGAAGAAAGAGGGGAGATCCTTTCTTCTCAGCAGATATTTCAATAGAAACGTTGGATACTTCTTTAATCTTTATACGGTCTTAGAAGGAACTGTTCTATTTTGGACCAACCTTGATTGGGCCCTATGAATGAGGACTGGAGTAGAATAGAGCTCCATTTGAAAAAGAGGAGATTCTTAAGGCTATTAAGAATCTGAGAATCTGAAGTCACATCTCTGAAAGCAGCTTGGGACAATTCTTGAAAATGACTAATAGGGTAAGATTTCTTTTGGAGTGGGTATTATTTAACTGCACAATGAGACATATGCTTACCTTATACTAAAGAAGGATAAGCCTCAATGGGTTTATAAACTGTAGACCAACGAGAAGGTTATGACATAATGCTTGCCTTATCTAGCTTTGTATGAGGACACCAACGAGAAGTTTGATCATGATGAACTCACCAATCAAACTAATCTTACTCAGAGTGGAAAACTTCAAATTTGAGAATATTTGATTTTTGTGGGAAAGAGAGACAGCAAAGCTTTCAACGGTCTAGCCAGCTTTGCCGCTGCCAGAGTACTCTCGCGGCCTCTATATATAATAATTTTTTTAATTCATTTTTCCTTTTGATTTTATGTATAAATTTGGTATTTCATTATCTTTTATATAGTTTAACGAAATGTGTTAATAAATCATGTGATATTGTTTTTTGTATGTTTCTCATTTTTCAACCTATATATTATTTTGGCATCATACAGTAGTTTGAAAGAGCCTGACTAAAGAGGCTTTATTGTGTTAATTGATGACTAGTGCTTGCTATTCTTCTATTCTAGTACATTCTTCTATTGGATTCTTCTGATTTGTCGTTTCTTTTCGTGTAATTTGCAATGTGATTAGATAGTTGATATTCACTTCAGGATCGCATGATGAAGGTTATTGCAATTTATTTAACTTTGCGCCTGATGTCCTTCGGCCCTTTCTCATCATCTCAACTTCCACTGCACTTGGTTCCTGATGATCAGTTATTTCGCTATGCACCGTCTTTCAGTGCTGTAGTTTACAAGGGAAACAAAATGTACGAAAAACATAAGAGACTAGAGTTTTTACCAGGGAAATCGCCCGTTGTTTCAAGCTGCTATTTGCTCCCAGAAGTAATGATGGAGGTAACACTTGGCCCCTGTTAGTTAATTTATTTTTGATACATTATTGGATCTTGGAAATGTTTGTTCCCATCGAATTATATGACGCTGGATGGTTGATCAGATTCCTTCCAAACATGATAAACTACTTCATTTACTTTAGCAATATTAGTCATAATTTTTGCTCAACTATTATTTTGGATAATATGCTTAAAAGCTTTGAACTTCATTCAAACATCATACTTTCTGCATGGATCTAGATGTGTTGACTGTATAAACTGGGAAGTAATAGTAGTGCTGAGATGAGTCAACTCAAACGCCCAACGAATTCTCCACACATTTAGAGAAAATGAAGTTTCTAAACGCAGATATGTGGCTTCTTGTTCTAGTGATCAGCTAAAGGTTTGTTTCTCGTGTGAGTGCTTTATTAACCCTCACATTTGAATTATCGTTTACACCAATACTTTTTGACTTTGCAGGATAATCAATAGATGATTATCATAATCTTCTCTCTCTACTTGAGGGAAATAACCAGTTCAAAGTGATAATACTTGAAGACCAATGAATGGTGATAACATCAGCAAACTGAAGGAAAGATTATTTATATCATACTGCTTAATACCTGCACCTCTAATAATTTGTTGAGTACTGGTTTCCTGCACGTATATCAAATGTGCAATCTTGCAGCTTTATGTGCACCTATTTCTAATGCTGGATTGCTGTCTCATCATTCAAAAGTGATCTGCTTGACAACTCCATGAAATTGTCGTTTCAACTCGGAAAGTTTATTCTTGACTCTTACATCATTATATCTTCTCTCTTCTCTCTATTGAAAAGTCTATTTATGCCTAAACAACTACCTTTCTTATTGAATGGGATAGTATATTTTCTCAAATTGAAATAAAAGGGAAAAGATCAGTAGATTCATTGATGATTATTTTGTATGTTCTGTCTATAATATTTTATTGGAAACACTTTCATTATGATATATATTAATAGATAAATATATATATATATTATATATGAGTATTTCTCTATATGCTGTTCTAGTGTTAATATATCTCTATTGTTAATATTATACTTAGAGGTAAATAATATAAAGAGAGAAATAATATATATCAGCGTGGCCACGTAACCTAAATATAATTTAAATTTTATTCAATTTATGAAAAACAAATTTATTATTATAATTACTAAATGTCTCTCTATAATAGATCGAATTATAAGCTGTCTGATTCACAGTTAATATATCTATATATATATATATATATTACAAGTTTATTTGAAAACTAAATATATATAATCAAAGCCTTTTATTTGCTTCATATATCTATATCTATATATCATGTGACTATATTCAGTAAAATCTCCTCCCGTTAGGCAATGAGTTCAAGTTCTGCCTCTAAAAGTAAAACAACTCACCCAGGACCTCATTGCCAATGGTAATACGTAGTGTCGTGTTCCAAGTATCCGGAGAGATATATATTGCAGTATCTTAGTTGGCCCCTTTCTCTATATATATATATATCGCAAAAATTGTTATTATATTAATGTATACTTTTAAAGATCCTATATAAAAATCTCCAATATCCAAATAATCATCTATCGCAATCTCGACTCTGCCAGAGAAAGTTTCTGCTGTTCGTATAATAATGTAATGTTCCATTATTTTTTTTTTTTTTCATTCTATCTATCTTGTCTTATATGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTGTGTGTGTGTAGATTTCTGTTTTAAATTTTCTCATTGTTTGTCATTGTTTGAACTGAATGGACTGAAAATACATACTTGTTTGTGGTCTTAGCCTTGATCTGTTTATTCTATGATATTCTGATAAGAAAGGAGAATCGGCTTCTAATGTCATGTATGGTATCTTGACAGCTCGTTGTAATATCCCTATATTCTGGAACCTTCAATGGGAAATGTGAACACCAAAGGGGCTCCAGAGTGGATTACTTGGATATTGGAATAAAAGCGTGGTAAGCTACAACTTCTTGATGCACATGCCTAAGGGAGATGAAAAAAAACAGGCATCGAGAGTCTAATTCTTTTCCAGGTAGTCCATATGGTTTGAATTGGTAATTTTTGTTTTTGAGGTTAATAGCTTTTGAGATAGGTGCTTATTAATATATCTGAAGGGATGGAATGTGGAATTCAGGCTTATTATTATTATTATTATTTATTTATTTAAAAAAAAAGAAACTGATCTGGCATTGAACTTACTTAATGCACGAGTTTAGATGACCATAGGATTGTATTATTATGATTGAAACTGTAATCAAAATGAACAGCTTTTATTAGTTAAGTGAAGGATCGCTAACAAGAGCCAGGATAGTAATATGGTACAATTCTGGTGTACGGAGAACAGATTTGTCAGAGACTTTGAACGAAACTACTCCTGGAGGGAGTGAATTAAAAAAAATAAAAATAAAAAGAAGCAAAATTAAGGAGTTATTAGAACCTTCTAATTTATGCAAATAATCCTGCAAAGAGAAATGGAGAGTAATTTAGAAAGAGAATACCATTGCAAAACTTACAATCTAGCCATTAAAAATCGTTTTAGACCATTTGATAATCAATCTGGTTTTATATTTTTCGTTTTCCTGTTTTCTATTTTTTAGAAAATGAGAGAGAGAGAGACGAATTTTTTTATACAATGGGAGTTCGATACATCACGTTTTTTGAGATTTAGTTCACCTTCAGATGGATACAGTTTTCATTCTACACAATAAAATTTTTATTTGTCTGGGTCTAAAATTAAGTGCTTAAATCAATTATTTTTGTTTCAAGATTTCCCCTCTTCTCCCTCCCATTATTTTCTTATCTGTGATTTGTTAAGTGGTATAATTCATTTTATATTTTTGTGGAGGGAAATTTTAAATGTGGAAAATATTCAATTGGCAGTCAATTTGGTGATCTGGAAGGACACCTAATTGGTGATATTTTTAGATGACTTTTTGGCGTCAGAGGTTTGGGATTGATTCTTATGAACGCATTGATGGGGTCTTATTTATTCCAAAAAGCAAGCTGCCTCTAAACAAATTAACACCAGAGAGTGGAAGAATTTGTTTCTGCTAGAAGTTCGAGCATGCCTCCCAAGTATTAAACTTTCGTCAGTTGACAGCATTATCATTTATGATAGTGACTGGACCCCATGAATGATTTAAGAGCACTTCAGAGATAACACTTGATTCTCAGTTGGAGCAGATAAAAATTTTCGCTTATATTCATCTTTGTACTGTGAAGAAAAGGTTCTTATGCTGTCCCTGCAAAATAAAACTTTGGAGGGAAATTTACAGAACATCAGCTGGAGTTGTGCTAATATGCTGCTAATGTGGGGAGCATCTAATTTATTCGCGCGACTTAGATAAGTTCCTTGACAAGGATAAAACTGCAGATTCCTTATCAGATACAGCATTTTTGGAAGAAGTGGTAAATGATTTGGTTTTACTTATTTCACAAAATGCCAGAAGCACAGACGAATTTGATTCCCATGTCATATTAAAAAGTTCAACAGATTGA

mRNA sequence

ATGTCACCAAGCTTTGTGAATTTTGGCACGAGGCAAAAAATGCTGGTTGTGATTGATAATCAGGATCGCATGATGAAGGTTATTGCAATTTATTTAACTTTGCGCCTGATGTCCTTCGGCCCTTTCTCATCATCTCAACTTCCACTGCACTTGGTTCCTGATGATCAGTTATTTCGCTATGCACCGTCTTTCAGTGCTGTAGTTTACAAGGGAAACAAAATGTACGAAAAACATAAGAGACTAGAGTTTTTACCAGGGAAATCGCCCGTTGTTTCAAGCTGCTATTTGCTCCCAGAAGTAATGATGGAGCAAACTGAAGGAAAGATTATTTATATCATACTGCTTAATACCTGCACCTCTAATAATTTGTTGAGTACTGGTTTCCTGCACGTATATCAAATGTGCAATCTTGCAGCTTTATGTGCACCTATTTCTAATGCTGGATTGCTGTCTCATCATTCAAAAAGGTTTGGGATTGATTCTTATGAACGCATTGATGGGGTCTTATTTATTCCAAAAAGCAAGCTGCCTCTAAACAAATTAACACCAGAGAATAAGTTCCTTGACAAGGATAAAACTGCAGATTCCTTATCAGATACAGCATTTTTGGAAGAAGTGGTAAATGATTTGGTTTTACTTATTTCACAAAATGCCAGAAGCACAGACGAATTTGATTCCCATGTCATATTAAAAAGTTCAACAGATTGA

Coding sequence (CDS)

ATGTCACCAAGCTTTGTGAATTTTGGCACGAGGCAAAAAATGCTGGTTGTGATTGATAATCAGGATCGCATGATGAAGGTTATTGCAATTTATTTAACTTTGCGCCTGATGTCCTTCGGCCCTTTCTCATCATCTCAACTTCCACTGCACTTGGTTCCTGATGATCAGTTATTTCGCTATGCACCGTCTTTCAGTGCTGTAGTTTACAAGGGAAACAAAATGTACGAAAAACATAAGAGACTAGAGTTTTTACCAGGGAAATCGCCCGTTGTTTCAAGCTGCTATTTGCTCCCAGAAGTAATGATGGAGCAAACTGAAGGAAAGATTATTTATATCATACTGCTTAATACCTGCACCTCTAATAATTTGTTGAGTACTGGTTTCCTGCACGTATATCAAATGTGCAATCTTGCAGCTTTATGTGCACCTATTTCTAATGCTGGATTGCTGTCTCATCATTCAAAAAGGTTTGGGATTGATTCTTATGAACGCATTGATGGGGTCTTATTTATTCCAAAAAGCAAGCTGCCTCTAAACAAATTAACACCAGAGAATAAGTTCCTTGACAAGGATAAAACTGCAGATTCCTTATCAGATACAGCATTTTTGGAAGAAGTGGTAAATGATTTGGTTTTACTTATTTCACAAAATGCCAGAAGCACAGACGAATTTGATTCCCATGTCATATTAAAAAGTTCAACAGATTGA

Protein sequence

MSPSFVNFGTRQKMLVVIDNQDRMMKVIAIYLTLRLMSFGPFSSSQLPLHLVPDDQLFRYAPSFSAVVYKGNKMYEKHKRLEFLPGKSPVVSSCYLLPEVMMEQTEGKIIYIILLNTCTSNNLLSTGFLHVYQMCNLAALCAPISNAGLLSHHSKRFGIDSYERIDGVLFIPKSKLPLNKLTPENKFLDKDKTADSLSDTAFLEEVVNDLVLLISQNARSTDEFDSHVILKSSTD
Homology
[Close]
BLAST of Carg12277 vs. NCBI nr
Match: KAG7036833.1 (hypothetical protein SDJN02_00453, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 464.9 bits (1195), Expect = 4.0e-127
Identity = 235/235 (100.00%), Postives = 235/235 (100.00%), Query Frame = 0 

Query: 1   MSPSFVNFGTRQKMLVVIDNQDRMMKVIAIYLTLRLMSFGPFSSSQLPLHLVPDDQLFRY 60
           MSPSFVNFGTRQKMLVVIDNQDRMMKVIAIYLTLRLMSFGPFSSSQLPLHLVPDDQLFRY
Sbjct: 1   MSPSFVNFGTRQKMLVVIDNQDRMMKVIAIYLTLRLMSFGPFSSSQLPLHLVPDDQLFRY 60

Query: 61  APSFSAVVYKGNKMYEKHKRLEFLPGKSPVVSSCYLLPEVMMEQTEGKIIYIILLNTCTS 120
           APSFSAVVYKGNKMYEKHKRLEFLPGKSPVVSSCYLLPEVMMEQTEGKIIYIILLNTCTS
Sbjct: 61  APSFSAVVYKGNKMYEKHKRLEFLPGKSPVVSSCYLLPEVMMEQTEGKIIYIILLNTCTS 120

Query: 121 NNLLSTGFLHVYQMCNLAALCAPISNAGLLSHHSKRFGIDSYERIDGVLFIPKSKLPLNK 180
           NNLLSTGFLHVYQMCNLAALCAPISNAGLLSHHSKRFGIDSYERIDGVLFIPKSKLPLNK
Sbjct: 121 NNLLSTGFLHVYQMCNLAALCAPISNAGLLSHHSKRFGIDSYERIDGVLFIPKSKLPLNK 180

Query: 181 LTPENKFLDKDKTADSLSDTAFLEEVVNDLVLLISQNARSTDEFDSHVILKSSTD 236
           LTPENKFLDKDKTADSLSDTAFLEEVVNDLVLLISQNARSTDEFDSHVILKSSTD
Sbjct: 181 LTPENKFLDKDKTADSLSDTAFLEEVVNDLVLLISQNARSTDEFDSHVILKSSTD 235

[Close]
BLAST of Carg12277 vs. NCBI nr
Match: KAG7036831.1 (Helicase protein MOM1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 89.7 bits (221), Expect = 3.5e-14
Identity = 46/47 (97.87%), Postives = 47/47 (100.00%), Query Frame = 0 

Query: 185 NKFLDKDKTADSLSDTAFLEEVVNDLVLLISQNARSTDEFDSHVILK 232
           +KFLDKDKTADSLSDTAFLEEVVNDLVLLISQNARSTDEFDSHVILK
Sbjct: 523 DKFLDKDKTADSLSDTAFLEEVVNDLVLLISQNARSTDEFDSHVILK 569

[Close]
BLAST of Carg12277 vs. NCBI nr
Match: KAG6607145.1 (Helicase protein MOM1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 89.7 bits (221), Expect = 3.5e-14
Identity = 46/47 (97.87%), Postives = 47/47 (100.00%), Query Frame = 0 

Query: 185  NKFLDKDKTADSLSDTAFLEEVVNDLVLLISQNARSTDEFDSHVILK 232
            +KFLDKDKTADSLSDTAFLEEVVNDLVLLISQNARSTDEFDSHVILK
Sbjct: 1202 DKFLDKDKTADSLSDTAFLEEVVNDLVLLISQNARSTDEFDSHVILK 1248

[Close]
BLAST of Carg12277 vs. NCBI nr
Match: XP_022949441.1 (helicase protein MOM1 isoform X2 [Cucurbita moschata])

HSP 1 Score: 89.7 bits (221), Expect = 3.5e-14
Identity = 46/47 (97.87%), Postives = 47/47 (100.00%), Query Frame = 0 

Query: 185 NKFLDKDKTADSLSDTAFLEEVVNDLVLLISQNARSTDEFDSHVILK 232
           +KFLDKDKTADSLSDTAFLEEVVNDLVLLISQNARSTDEFDSHVILK
Sbjct: 739 DKFLDKDKTADSLSDTAFLEEVVNDLVLLISQNARSTDEFDSHVILK 785

[Close]
BLAST of Carg12277 vs. NCBI nr
Match: XP_022949439.1 (helicase protein MOM1 isoform X1 [Cucurbita moschata] >XP_022949440.1 helicase protein MOM1 isoform X1 [Cucurbita moschata])

HSP 1 Score: 89.7 bits (221), Expect = 3.5e-14
Identity = 46/47 (97.87%), Postives = 47/47 (100.00%), Query Frame = 0 

Query: 185  NKFLDKDKTADSLSDTAFLEEVVNDLVLLISQNARSTDEFDSHVILK 232
            +KFLDKDKTADSLSDTAFLEEVVNDLVLLISQNARSTDEFDSHVILK
Sbjct: 1170 DKFLDKDKTADSLSDTAFLEEVVNDLVLLISQNARSTDEFDSHVILK 1216

[Close]
BLAST of Carg12277 vs. ExPASy TrEMBL
Match: A0A6J1GCT4 (helicase protein MOM1 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111452784 PE=4 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 1.7e-14
Identity = 46/47 (97.87%), Postives = 47/47 (100.00%), Query Frame = 0 

Query: 185  NKFLDKDKTADSLSDTAFLEEVVNDLVLLISQNARSTDEFDSHVILK 232
            +KFLDKDKTADSLSDTAFLEEVVNDLVLLISQNARSTDEFDSHVILK
Sbjct: 1170 DKFLDKDKTADSLSDTAFLEEVVNDLVLLISQNARSTDEFDSHVILK 1216

[Close]
BLAST of Carg12277 vs. ExPASy TrEMBL
Match: A0A6J1GC12 (helicase protein MOM1 isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111452784 PE=4 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 1.7e-14
Identity = 46/47 (97.87%), Postives = 47/47 (100.00%), Query Frame = 0 

Query: 185 NKFLDKDKTADSLSDTAFLEEVVNDLVLLISQNARSTDEFDSHVILK 232
           +KFLDKDKTADSLSDTAFLEEVVNDLVLLISQNARSTDEFDSHVILK
Sbjct: 714 DKFLDKDKTADSLSDTAFLEEVVNDLVLLISQNARSTDEFDSHVILK 760

[Close]
BLAST of Carg12277 vs. ExPASy TrEMBL
Match: A0A6J1GC13 (helicase protein MOM1 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111452784 PE=4 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 1.7e-14
Identity = 46/47 (97.87%), Postives = 47/47 (100.00%), Query Frame = 0 

Query: 185 NKFLDKDKTADSLSDTAFLEEVVNDLVLLISQNARSTDEFDSHVILK 232
           +KFLDKDKTADSLSDTAFLEEVVNDLVLLISQNARSTDEFDSHVILK
Sbjct: 739 DKFLDKDKTADSLSDTAFLEEVVNDLVLLISQNARSTDEFDSHVILK 785

[Close]
BLAST of Carg12277 vs. ExPASy TrEMBL
Match: A0A6J1KDL3 (helicase protein MOM1 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111493379 PE=4 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 4.2e-13
Identity = 44/47 (93.62%), Postives = 45/47 (95.74%), Query Frame = 0 

Query: 185  NKFLDKDKTADSLSDTAFLEEVVNDLVLLISQNARSTDEFDSHVILK 232
            +KFLDKDKTADSLSDTA LEEVVNDLVLLISQNARSTDE DSHVILK
Sbjct: 1170 DKFLDKDKTADSLSDTALLEEVVNDLVLLISQNARSTDEIDSHVILK 1216

[Close]
BLAST of Carg12277 vs. ExPASy TrEMBL
Match: A0A6J1K931 (helicase protein MOM1 isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111493379 PE=4 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 4.2e-13
Identity = 44/47 (93.62%), Postives = 45/47 (95.74%), Query Frame = 0 

Query: 185 NKFLDKDKTADSLSDTAFLEEVVNDLVLLISQNARSTDEFDSHVILK 232
           +KFLDKDKTADSLSDTA LEEVVNDLVLLISQNARSTDE DSHVILK
Sbjct: 714 DKFLDKDKTADSLSDTALLEEVVNDLVLLISQNARSTDEIDSHVILK 760

The following BLAST results are available for this feature:
BLAST of Carg12277 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7036833.14.0e-127100.00hypothetical protein SDJN02_00453, partial [Cucurbita argyrosperma subsp. argyro... [more]
KAG7036831.13.5e-1497.87Helicase protein MOM1 [Cucurbita argyrosperma subsp. argyrosperma][more]
KAG6607145.13.5e-1497.87Helicase protein MOM1, partial [Cucurbita argyrosperma subsp. sororia][more]
XP_022949441.13.5e-1497.87helicase protein MOM1 isoform X2 [Cucurbita moschata][more]
XP_022949439.13.5e-1497.87helicase protein MOM1 isoform X1 [Cucurbita moschata] >XP_022949440.1 helicase p... [more]
BLAST of Carg12277 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Carg12277 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1GCT41.7e-1497.87helicase protein MOM1 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111452784 P... [more]
A0A6J1GC121.7e-1497.87helicase protein MOM1 isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111452784 P... [more]
A0A6J1GC131.7e-1497.87helicase protein MOM1 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111452784 P... [more]
A0A6J1KDL34.2e-1393.62helicase protein MOM1 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111493379 PE=... [more]
A0A6J1K9314.2e-1393.62helicase protein MOM1 isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111493379 PE=... [more]
BLAST of Carg12277 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR45623CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 3-RELATED-RELATEDcoord: 16..74
NoneNo IPR availablePANTHERPTHR45623:SF13HELICASE PROTEIN MOM1-LIKE ISOFORM X1coord: 16..74

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg12277-RACarg12277-RAmRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0004386 helicase activity
molecular_function GO:0046872 metal ion binding