Carg12153 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg12153
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	mediator of RNA polymerase II transcription subunit 17-like
Location	Carg_Chr11: 2477718 .. 2482338 (+)
RNA-Seq Expression	Carg12153
Synteny	Carg12153

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCGAGAGATTCCCATCGTATGTTCATTTTTTCCTCTGGTTTTACCCCATTTTTGGTTCCTGAGATAACTGAGGAAACATAAATTACTTGATATGCGTGTTAAGGTAGAAGAAGATGTAGCTTAGTTGACGAATGCGTGCTTGTGATTAGGCATTCTTAATTCTGATTACGTTCGTGTGTGTACCTTGGTGATTGTTTAGAGTGAACTCTGATACGAGTTTCTCACTATGCTAAATTATCTGGAATATAATTTGTCAATGTATTTCTCGGTTTTCCTTGGGAAGTTTCTGATTAATTTCTCGAACGTTTTTGGTTAATTAAGGTTGGTTTTTGCTATATTGTTAATAGAGATGTAGGGTATGAAGAGAAACGGTTGTCGCTTATTCGGAGAATTGACTTTGCTTGGGCAATAGAGAAGGACGATGACAAAAAGAAGCAGAAGAAGAGCTCCAAGGAGAGTTCAACGCCGTGGCCATGGCAGAACATGATAGAAAACTTGCAGTTGGCTCATCAGGAGCTCTCTGTTATCATAGACCTGATCAACACCGTGAGTTTCTAAATTGAACGCCTCTGATTTTGCTAGATTTTTACCATACTGTTTGTTGTATAAAGAAAATATTTTTTGTCTTGATATAATTGTAGGTGGAAGCTAATGATGCAGTAACAGTGGCAGGAATGACAAGGCCAAAACTATTACCTAATGAAGCTTTATCTGATCTTGGAGTGTCTGTAGCAACGAAACTACAATGCTTTCGAGTACTATTTTTATCCTTCTTTTGTTCACAGAATTATTGCCATTTCCGATTAGCTTGCTTTCATTGGGTTGGAGCAACTGTGTTAATATTAATTTGCAGTATTATTCAGTAAAATTTCATCTTATTATCTGTACTATCGCTTTGGAAGTGCCTGATTTTATCTCCTACCCCTTAATCTCTACAGCATCTTGGTAAATATTTCAAGCAGTCAGCTAAAGGTTTGGAACGCCAGGTTGCAAGGGAAGCAAGATTCTATGGTGCTCTAATTCGGTAATCAATTCATTTCATTAATCCTGCAATCATTGTGCAATGAACCTATGTTAAAAATCATTTATCATTGTGAATCTGATAGTTTGTGCACGGTAGTACTCTTTAAAATCCCTGAAGTGTCCTGAAATTAAAAAGTTTTATCATAAAATATAAATATTCTATGATTTGTATTCTTGGGCCTTTATCAATTTAGATAAATAGAAATTTCTGGTAAGATAACTTAGTTATGCCCCTCATATAGTCATATGTCATACTATAAGATTTATAGGATAAATGATCCGTTCTAGGTATTAATTGCCTCAATGAAGATCTAGATTTACGTATAGGGCATAACCTCAAGTACTCATTTTGGGATCCTAAGGGGGATGCTGGCAAAAAAAGAGAGGTTATTTTCTGTAAAGGGGTGGGATTAACCCTTATTCATTTGGTTCTTACCAATAGCTGTCTTCTTCTTCTTCTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATGCATTCAGGACCTCGTGTATCTGTTGTTTGATCCAAAAAGCTTATATGAGACTTCTTCTCTTGGGAGGGTGTGTGAGAATGAGTGTTATCTAGTTTACTGGAGCTTGGCATCGTGTTGTTTGAGAGTGGTTGATTGGGATGGTTAATTGCTGACTAATAACCTTGCTGCTTTAGTTAAGTGGCTTTGGGCTTTGGAGTTTTTGTTGGTAGCAATCTACTTCAGGAAATATAAGATTATTGCAAGAAGATTTGGGGTTCAGTCCAGTAGTTGGGGTTCCAATCAGACTTCATTAGTCTCTCATCATAGTTCCAGAAGGCCATTGCTTAGGATTTTTTGTTAATTGGGGAGCTTCATCGCAAACTCAAATGGGTAGGATATAGATGATCATTGTACTTTTCAGTTTTCACTCTACTGACAAATTTTGTTTTTTTTTAAGAAAAAAGAAAAAAACCTGTCATTTAAACGAGCTCCCATAGTTCCGAAATTGTAGGGAGAAAATATTGGTTGCTTCCCTGGAGGAGGTTATTTTCCATATTCTGTCAACCCTTGCTAAGGTTAGGTCATTAAGCAAGGTGGTATTCTCGAGGCATCTTGTTGAAGTGTAATGGGGGAACCTTGATTGTAGATCTTTTCTTAACTGGGAGGTATAGACTCCTTTCAATCTACTGCCACTTTGGGCTTCCATCTGTCACCCCGTCATCAGGCATATACCCTATCTAATAGTTTGAAGACAAGGGTGGTTGCTCCAAATTTCCCTTTGTATAGCTTTGTATGGTCTGTTTCCTTAGTATGTGTATGGGGCTTCTTCGTAGCCCCTTGCTACTTTATAAGTTGCACCTTCGCATATTCTCCCTTTCTTTGTTTTTGGTTCCTTCATCTTTTTTTTTTCTTCTAATAAACCTTTGGATTATTTAGGGTTCGGCCTTCTTAATATTCTGAGCTTGTTATTTGATTCTTTCGTAACATTTCATCTATAAATTGAGAATTTCCACCATTTGAAATTTAATAACTTTTAACTTCTGGAATTTACTTTATTTAATATCTAATTAACCATAAATATAACCATATATTAGTTTATTATAGTGCCAATTTCTATACTAAGAATCGGAAACTTTTTTGTACTTTTAATGCTTTCTAATCTTCACAAATTTTCAGTATTTGCTGATGATGTATATCAGATTGCAGCAAAATTGGAAGGTTAAAAGGCAGCGTGTGGCTGCTGCTCCAGCTCCTGCAAATGAAGGCTTTACCATTGATTTATTTGACAGTTCATCATGTGACCCGTCATCTGTGTTTCGACCATCTTCATCTACTATTCGTGTTGAACATGATTTGTCTGGAATGCTGACAATTAATTTACCTCCAAATTCATGCCACTCCCTTCGTTTTGGATTTCTCAGTGGATGTAATGTAGAAGATTCTTTGGAACTTGGTAACAACGAGTCCACAAATTCAACCAACCAGTCTTCAAATAAAAGTGAGAAGGAGTTTACGAATGACGATGCGTACATCAAGGAAACAAACTCACTTCTCCGTGAAGTTCACCATGCCATTTTCAGTGAGCAGGTGGTTTCTTTATTACATTAATCTTGCTCAGTATACGCCTTTTCTACTTTTGTCCCCCACCACATGATACATCGTTTGCTCTACTGGTTCCAGGTGTTTGATTTGGTGAACCGTGAAGCATTCAATCCGTCCTTGGGTATCAACGTGACTGGCATACGAGAAAATTACTTGCAATTAAGTATAGATCAGGGTACCTCGGTCTTCATCTCTCTTGTGCCGTCTAGTCAAAGTTGCCAACTAGTTGATGGTGCAAATACTGAGATTTTGGATAATACTAATTTACCTTTTGATTCCCTTGATGGGATTGAATTACCAGATAGAGATGACCACCTTGAAAAGAAATTGCGGAATCCTAATCATATAACCTTTGAGATATATCTGCAACAAATTTTTCACGCGCTAGTGTTTGTAAAATCAAATGATAGAGCCATTTCTGCCTTCAGCAGGCAATCGGCTCAAGTTTCTAATGATGGGTCTGGGCTTCTTGGTCATTTCTGTTTGTCTCTGGCCCACAGAATATTCGCAAACAATGTTCTCATGGAGCTCGAAAATGTGGTATAGTCCCAATTTCTTAATTTCTTCCATTTTTTGTCGATGGTGAAACTGCACTGTTTATATATATATATATAAAACTAAAATGGTTCTGATTCCTGTATTTGATGTTACTCAGCATATTAAACATGCAGTTTATCTTTGGTTGTTCTTAGGTTTGGAAGGTCCCATTTCTTCAATTGATATCTCATCCTACTTGGAATTCTCGTAAATCTTCATGGACGTTTTTCATGGAAGTTCCCCGGTCCATACTTCATCCTACTAGCATCCAAGCTCGTACATCAGACAGTCATCAGATGAATAATGTAACCAAATCGCTTTTTCAGACTAAAGTGGTTGTAAATGATAATTGCATTACTATTGAGGGGGAAGGTGCTCCTAATGTCGTTAGCTTGTTCAAGCGAAATTCCAAGGATATCTATTCGATGAACAGATATGGCTGTGACTTGGCTGATCTTCCCGTGATAATTCTGCTGCAGGTGAGCACAAAGTAGATTTCCATGCTTTTAAGCTGCCTTATCAATGGAAAGTAATAGTAATATTATCATCGTATTTTTGCAACAGGTTGCAAGCCAAATTGTTCTTTGGCTTCATGAAGAAGCTCTAACCTGGGGAATAAAGGCCAATCGTGACTTCCTAAGTCTGTCATTTGAGCTAGAACAGGGCGAAACACTCCGTCTGGTAGCCCATGTGGACCCAGAGGATACTCAAGGATGCCTTTCTTGGTGGTTGGTAATGGACGATGGCTTGATGGATGACAGGAAACTTAATTTTGACATATCCGATGTTGTACCTGAATACAGGAAGTTTTTGGGCCATTTATCTCTGGAAGTTTTGCATTCAACACTAATGGATTTGGTTAGTTTGTGTAGTGGATTTGGTAGTAGCCTATAACCACCAAATTGCATTGAATTCTTGTAATTTCCGCCTCTAGATGTTCAAATCTAATGAAATCTTCAATTTGTGCCCCC

mRNA sequence

CTCGAGAGATTCCCATCGTATGTTCATTTTTTCCTCTGGTTTTACCCCATTTTTGGTTCCTGAGATAACTGAGAAGATGTAGCTTAGTTGACGAATGCGTGCTTGTGATTAGGCATTCTTAATTCTGATTACGTTCGTGTGTGTACCTTGGTGATTGTTTAGAGTGAACTCTGATACGAGTTTCTCACTATGCTAAATTATCTGGAATATAATTTGTCAATGTATTTCTCGGTTTTCCTTGGGAAGTTTCTGATTAATTTCTCGAACGTTTTTGGTTAATTAAGGTTGGTTTTTGCTATATTGTTAATAGAGATGTAGGGTATGAAGAGAAACGGTTGTCGCTTATTCGGAGAATTGACTTTGCTTGGGCAATAGAGAAGGACGATGACAAAAAGAAGCAGAAGAAGAGCTCCAAGGAGAGTTCAACGCCGTGGCCATGGCAGAACATGATAGAAAACTTGCAGTTGGCTCATCAGGAGCTCTCTGTTATCATAGACCTGATCAACACCGTGGAAGCTAATGATGCAGTAACAGTGGCAGGAATGACAAGGCCAAAACTATTACCTAATGAAGCTTTATCTGATCTTGGAGTGTCTGTAGCAACGAAACTACAATGCTTTCGACATCTTGGTAAATATTTCAAGCAGTCAGCTAAAGGTTTGGAACGCCAGGTTGCAAGGGAAGCAAGATTCTATGGTGCTCTAATTCGATTGCAGCAAAATTGGAAGGTTAAAAGGCAGCGTGTGGCTGCTGCTCCAGCTCCTGCAAATGAAGGCTTTACCATTGATTTATTTGACAGTTCATCATGTGACCCGTCATCTGTGTTTCGACCATCTTCATCTACTATTCGTGTTGAACATGATTTGTCTGGAATGCTGACAATTAATTTACCTCCAAATTCATGCCACTCCCTTCGTTTTGGATTTCTCAGTGGATGTAATGTAGAAGATTCTTTGGAACTTGGTAACAACGAGTCCACAAATTCAACCAACCAGTCTTCAAATAAAAGTGAGAAGGAGTTTACGAATGACGATGCGTACATCAAGGAAACAAACTCACTTCTCCGTGAAGTTCACCATGCCATTTTCAGTGAGCAGGTGTTTGATTTGGTGAACCGTGAAGCATTCAATCCGTCCTTGGGTATCAACGTGACTGGCATACGAGAAAATTACTTGCAATTAAGTATAGATCAGGGTACCTCGGTCTTCATCTCTCTTGTGCCGTCTAGTCAAAGTTGCCAACTAGTTGATGGTGCAAATACTGAGATTTTGGATAATACTAATTTACCTTTTGATTCCCTTGATGGGATTGAATTACCAGATAGAGATGACCACCTTGAAAAGAAATTGCGGAATCCTAATCATATAACCTTTGAGATATATCTGCAACAAATTTTTCACGCGCTAGTGTTTGTAAAATCAAATGATAGAGCCATTTCTGCCTTCAGCAGGCAATCGGCTCAAGTTTCTAATGATGGGTCTGGGCTTCTTGGTCATTTCTGTTTGTCTCTGGCCCACAGAATATTCGCAAACAATGTTCTCATGGAGCTCGAAAATGTGGTTTGGAAGGTCCCATTTCTTCAATTGATATCTCATCCTACTTGGAATTCTCGTAAATCTTCATGGACGTTTTTCATGGAAGTTCCCCGGTCCATACTTCATCCTACTAGCATCCAAGCTCGTACATCAGACAGTCATCAGATGAATAATGTAACCAAATCGCTTTTTCAGACTAAAGTGGTTGTAAATGATAATTGCATTACTATTGAGGGGGAAGGTGCTCCTAATGTCGTTAGCTTGTTCAAGCGAAATTCCAAGGATATCTATTCGATGAACAGATATGGCTGTGACTTGGCTGATCTTCCCGTGATAATTCTGCTGCAGGTTGCAAGCCAAATTGTTCTTTGGCTTCATGAAGAAGCTCTAACCTGGGGAATAAAGGCCAATCGTGACTTCCTAAGTCTGTCATTTGAGCTAGAACAGGGCGAAACACTCCGTCTGGTAGCCCATGTGGACCCAGAGGATACTCAAGGATGCCTTTCTTGGTGGTTGGTAATGGACGATGGCTTGATGGATGACAGGAAACTTAATTTTGACATATCCGATGTTGTACCTGAATACAGGAAGTTTTTGGGCCATTTATCTCTGGAAGTTTTGCATTCAACACTAATGGATTTGGTTAGTTTGTGTAGTGGATTTGGTAGTAGCCTATAACCACCAAATTGCATTGAATTCTTGTAATTTCCGCCTCTAGATGTTCAAATCTAATGAAATCTTCAATTTGTGCCCCC

Coding sequence (CDS)

ATGATAGAAAACTTGCAGTTGGCTCATCAGGAGCTCTCTGTTATCATAGACCTGATCAACACCGTGGAAGCTAATGATGCAGTAACAGTGGCAGGAATGACAAGGCCAAAACTATTACCTAATGAAGCTTTATCTGATCTTGGAGTGTCTGTAGCAACGAAACTACAATGCTTTCGACATCTTGGTAAATATTTCAAGCAGTCAGCTAAAGGTTTGGAACGCCAGGTTGCAAGGGAAGCAAGATTCTATGGTGCTCTAATTCGATTGCAGCAAAATTGGAAGGTTAAAAGGCAGCGTGTGGCTGCTGCTCCAGCTCCTGCAAATGAAGGCTTTACCATTGATTTATTTGACAGTTCATCATGTGACCCGTCATCTGTGTTTCGACCATCTTCATCTACTATTCGTGTTGAACATGATTTGTCTGGAATGCTGACAATTAATTTACCTCCAAATTCATGCCACTCCCTTCGTTTTGGATTTCTCAGTGGATGTAATGTAGAAGATTCTTTGGAACTTGGTAACAACGAGTCCACAAATTCAACCAACCAGTCTTCAAATAAAAGTGAGAAGGAGTTTACGAATGACGATGCGTACATCAAGGAAACAAACTCACTTCTCCGTGAAGTTCACCATGCCATTTTCAGTGAGCAGGTGTTTGATTTGGTGAACCGTGAAGCATTCAATCCGTCCTTGGGTATCAACGTGACTGGCATACGAGAAAATTACTTGCAATTAAGTATAGATCAGGGTACCTCGGTCTTCATCTCTCTTGTGCCGTCTAGTCAAAGTTGCCAACTAGTTGATGGTGCAAATACTGAGATTTTGGATAATACTAATTTACCTTTTGATTCCCTTGATGGGATTGAATTACCAGATAGAGATGACCACCTTGAAAAGAAATTGCGGAATCCTAATCATATAACCTTTGAGATATATCTGCAACAAATTTTTCACGCGCTAGTGTTTGTAAAATCAAATGATAGAGCCATTTCTGCCTTCAGCAGGCAATCGGCTCAAGTTTCTAATGATGGGTCTGGGCTTCTTGGTCATTTCTGTTTGTCTCTGGCCCACAGAATATTCGCAAACAATGTTCTCATGGAGCTCGAAAATGTGGTTTGGAAGGTCCCATTTCTTCAATTGATATCTCATCCTACTTGGAATTCTCGTAAATCTTCATGGACGTTTTTCATGGAAGTTCCCCGGTCCATACTTCATCCTACTAGCATCCAAGCTCGTACATCAGACAGTCATCAGATGAATAATGTAACCAAATCGCTTTTTCAGACTAAAGTGGTTGTAAATGATAATTGCATTACTATTGAGGGGGAAGGTGCTCCTAATGTCGTTAGCTTGTTCAAGCGAAATTCCAAGGATATCTATTCGATGAACAGATATGGCTGTGACTTGGCTGATCTTCCCGTGATAATTCTGCTGCAGGTTGCAAGCCAAATTGTTCTTTGGCTTCATGAAGAAGCTCTAACCTGGGGAATAAAGGCCAATCGTGACTTCCTAAGTCTGTCATTTGAGCTAGAACAGGGCGAAACACTCCGTCTGGTAGCCCATGTGGACCCAGAGGATACTCAAGGATGCCTTTCTTGGTGGTTGGTAATGGACGATGGCTTGATGGATGACAGGAAACTTAATTTTGACATATCCGATGTTGTACCTGAATACAGGAAGTTTTTGGGCCATTTATCTCTGGAAGTTTTGCATTCAACACTAATGGATTTGGTTAGTTTGTGTAGTGGATTTGGTAGTAGCCTATAA

Protein sequence

MIENLQLAHQELSVIIDLINTVEANDAVTVAGMTRPKLLPNEALSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAAPAPANEGFTIDLFDSSSCDPSSVFRPSSSTIRVEHDLSGMLTINLPPNSCHSLRFGFLSGCNVEDSLELGNNESTNSTNQSSNKSEKEFTNDDAYIKETNSLLREVHHAIFSEQVFDLVNREAFNPSLGINVTGIRENYLQLSIDQGTSVFISLVPSSQSCQLVDGANTEILDNTNLPFDSLDGIELPDRDDHLEKKLRNPNHITFEIYLQQIFHALVFVKSNDRAISAFSRQSAQVSNDGSGLLGHFCLSLAHRIFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPRSILHPTSIQARTSDSHQMNNVTKSLFQTKVVVNDNCITIEGEGAPNVVSLFKRNSKDIYSMNRYGCDLADLPVIILLQVASQIVLWLHEEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPEDTQGCLSWWLVMDDGLMDDRKLNFDISDVVPEYRKFLGHLSLEVLHSTLMDLVSLCSGFGSSL

Homology

[Close]

BLAST of Carg12153 vs. NCBI nr
Match: KAG7021807.1 (Mediator of RNA polymerase II transcription subunit 17 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1166.0 bits (3015), Expect = 0.0e+00
Identity = 588/588 (100.00%), Postives = 588/588 (100.00%), Query Frame = 0


Query: 1   MIENLQLAHQELSVIIDLINTVEANDAVTVAGMTRPKLLPNEALSDLGVSVATKLQCFRH 60
           MIENLQLAHQELSVIIDLINTVEANDAVTVAGMTRPKLLPNEALSDLGVSVATKLQCFRH
Sbjct: 1   MIENLQLAHQELSVIIDLINTVEANDAVTVAGMTRPKLLPNEALSDLGVSVATKLQCFRH 60

Query: 61  LGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAAPAPANEGFTIDLFDSSS 120
           LGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAAPAPANEGFTIDLFDSSS
Sbjct: 61  LGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAAPAPANEGFTIDLFDSSS 120

Query: 121 CDPSSVFRPSSSTIRVEHDLSGMLTINLPPNSCHSLRFGFLSGCNVEDSLELGNNESTNS 180
           CDPSSVFRPSSSTIRVEHDLSGMLTINLPPNSCHSLRFGFLSGCNVEDSLELGNNESTNS
Sbjct: 121 CDPSSVFRPSSSTIRVEHDLSGMLTINLPPNSCHSLRFGFLSGCNVEDSLELGNNESTNS 180

Query: 181 TNQSSNKSEKEFTNDDAYIKETNSLLREVHHAIFSEQVFDLVNREAFNPSLGINVTGIRE 240
           TNQSSNKSEKEFTNDDAYIKETNSLLREVHHAIFSEQVFDLVNREAFNPSLGINVTGIRE
Sbjct: 181 TNQSSNKSEKEFTNDDAYIKETNSLLREVHHAIFSEQVFDLVNREAFNPSLGINVTGIRE 240

Query: 241 NYLQLSIDQGTSVFISLVPSSQSCQLVDGANTEILDNTNLPFDSLDGIELPDRDDHLEKK 300
           NYLQLSIDQGTSVFISLVPSSQSCQLVDGANTEILDNTNLPFDSLDGIELPDRDDHLEKK
Sbjct: 241 NYLQLSIDQGTSVFISLVPSSQSCQLVDGANTEILDNTNLPFDSLDGIELPDRDDHLEKK 300

Query: 301 LRNPNHITFEIYLQQIFHALVFVKSNDRAISAFSRQSAQVSNDGSGLLGHFCLSLAHRIF 360
           LRNPNHITFEIYLQQIFHALVFVKSNDRAISAFSRQSAQVSNDGSGLLGHFCLSLAHRIF
Sbjct: 301 LRNPNHITFEIYLQQIFHALVFVKSNDRAISAFSRQSAQVSNDGSGLLGHFCLSLAHRIF 360

Query: 361 ANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPRSILHPTSIQARTSDSHQMN 420
           ANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPRSILHPTSIQARTSDSHQMN
Sbjct: 361 ANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPRSILHPTSIQARTSDSHQMN 420

Query: 421 NVTKSLFQTKVVVNDNCITIEGEGAPNVVSLFKRNSKDIYSMNRYGCDLADLPVIILLQV 480
           NVTKSLFQTKVVVNDNCITIEGEGAPNVVSLFKRNSKDIYSMNRYGCDLADLPVIILLQV
Sbjct: 421 NVTKSLFQTKVVVNDNCITIEGEGAPNVVSLFKRNSKDIYSMNRYGCDLADLPVIILLQV 480

Query: 481 ASQIVLWLHEEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPEDTQGCLSWWLVMDDG 540
           ASQIVLWLHEEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPEDTQGCLSWWLVMDDG
Sbjct: 481 ASQIVLWLHEEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPEDTQGCLSWWLVMDDG 540

Query: 541 LMDDRKLNFDISDVVPEYRKFLGHLSLEVLHSTLMDLVSLCSGFGSSL 589
           LMDDRKLNFDISDVVPEYRKFLGHLSLEVLHSTLMDLVSLCSGFGSSL
Sbjct: 541 LMDDRKLNFDISDVVPEYRKFLGHLSLEVLHSTLMDLVSLCSGFGSSL 588

[Close]

BLAST of Carg12153 vs. NCBI nr
Match: KAG6587922.1 (Mediator of RNA polymerase II transcription subunit 17, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1160.2 bits (3000), Expect = 0.0e+00
Identity = 585/588 (99.49%), Postives = 586/588 (99.66%), Query Frame = 0


Query: 1   MIENLQLAHQELSVIIDLINTVEANDAVTVAGMTRPKLLPNEALSDLGVSVATKLQCFRH 60
           MIENLQLAHQELSVIIDLINTVEANDAVTVAGMTRPKLLPNEALSDLGVSVATKLQCFRH
Sbjct: 76  MIENLQLAHQELSVIIDLINTVEANDAVTVAGMTRPKLLPNEALSDLGVSVATKLQCFRH 135

Query: 61  LGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAAPAPANEGFTIDLFDSSS 120
           LGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAAPAPANEGFTIDLFDSSS
Sbjct: 136 LGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAAPAPANEGFTIDLFDSSS 195

Query: 121 CDPSSVFRPSSSTIRVEHDLSGMLTINLPPNSCHSLRFGFLSGCNVEDSLELGNNESTNS 180
           CDPSSVFRPSSSTI VEHDLSGMLTINLPPNSCHSLRFGFLSGCNVE+SLELGNNESTNS
Sbjct: 196 CDPSSVFRPSSSTIHVEHDLSGMLTINLPPNSCHSLRFGFLSGCNVENSLELGNNESTNS 255

Query: 181 TNQSSNKSEKEFTNDDAYIKETNSLLREVHHAIFSEQVFDLVNREAFNPSLGINVTGIRE 240
           TNQSSNKSEKEFTNDDAYIKETNSLLREVHHAIFSEQVFDLVNREAFNPSLGINVTGIRE
Sbjct: 256 TNQSSNKSEKEFTNDDAYIKETNSLLREVHHAIFSEQVFDLVNREAFNPSLGINVTGIRE 315

Query: 241 NYLQLSIDQGTSVFISLVPSSQSCQLVDGANTEILDNTNLPFDSLDGIELPDRDDHLEKK 300
           NYLQLSIDQGTSVFISLVPSSQSCQLVDGANTEILDN NLPFDSLDGIELPDRDDHLEKK
Sbjct: 316 NYLQLSIDQGTSVFISLVPSSQSCQLVDGANTEILDNANLPFDSLDGIELPDRDDHLEKK 375

Query: 301 LRNPNHITFEIYLQQIFHALVFVKSNDRAISAFSRQSAQVSNDGSGLLGHFCLSLAHRIF 360
           LRNPNHITFEIYLQQIFHALVFVKSNDRAISAFSRQSAQVSNDGSGLLGHFCLSLAHRIF
Sbjct: 376 LRNPNHITFEIYLQQIFHALVFVKSNDRAISAFSRQSAQVSNDGSGLLGHFCLSLAHRIF 435

Query: 361 ANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPRSILHPTSIQARTSDSHQMN 420
           ANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPRSILHPTSIQARTSDSHQMN
Sbjct: 436 ANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPRSILHPTSIQARTSDSHQMN 495

Query: 421 NVTKSLFQTKVVVNDNCITIEGEGAPNVVSLFKRNSKDIYSMNRYGCDLADLPVIILLQV 480
           NVTKSLFQTKVVVNDNCITIEGEGAPNVVSLFKRNSKDIYSMNRYGCDLADLPVIILLQV
Sbjct: 496 NVTKSLFQTKVVVNDNCITIEGEGAPNVVSLFKRNSKDIYSMNRYGCDLADLPVIILLQV 555

Query: 481 ASQIVLWLHEEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPEDTQGCLSWWLVMDDG 540
           ASQIVLWLHEEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPEDTQGCLSWWLVMDDG
Sbjct: 556 ASQIVLWLHEEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPEDTQGCLSWWLVMDDG 615

Query: 541 LMDDRKLNFDISDVVPEYRKFLGHLSLEVLHSTLMDLVSLCSGFGSSL 589
           LMDDRKLNFDISDVVPEYRKFLGHLSLEVLHSTLMDLVSLCSGFGSSL
Sbjct: 616 LMDDRKLNFDISDVVPEYRKFLGHLSLEVLHSTLMDLVSLCSGFGSSL 663

[Close]

BLAST of Carg12153 vs. NCBI nr
Match: XP_023005226.1 (mediator of RNA polymerase II transcription subunit 17-like [Cucurbita maxima])

HSP 1 Score: 1154.8 bits (2986), Expect = 0.0e+00
Identity = 582/588 (98.98%), Postives = 584/588 (99.32%), Query Frame = 0


Query: 1   MIENLQLAHQELSVIIDLINTVEANDAVTVAGMTRPKLLPNEALSDLGVSVATKLQCFRH 60
           MIENLQLAHQELSVIIDLINTVEANDA+TVAGMTRPKLLPNEALSDLGVSVATKLQCFRH
Sbjct: 76  MIENLQLAHQELSVIIDLINTVEANDAITVAGMTRPKLLPNEALSDLGVSVATKLQCFRH 135

Query: 61  LGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAAPAPANEGFTIDLFDSSS 120
           LGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAAPAPANEGFTIDLFDSSS
Sbjct: 136 LGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAAPAPANEGFTIDLFDSSS 195

Query: 121 CDPSSVFRPSSSTIRVEHDLSGMLTINLPPNSCHSLRFGFLSGCNVEDSLELGNNESTNS 180
           CDPSSVFRPSSSTIRVEHDLSGMLTINLPPNSCHSLRFGFLSGCNVE+SLELGNNESTNS
Sbjct: 196 CDPSSVFRPSSSTIRVEHDLSGMLTINLPPNSCHSLRFGFLSGCNVENSLELGNNESTNS 255

Query: 181 TNQSSNKSEKEFTNDDAYIKETNSLLREVHHAIFSEQVFDLVNREAFNPSLGINVTGIRE 240
           TNQSSNKSEKEFTNDDAYIKETNSLLRE HHAIFSEQVFDLVNREAFNPSLGINVTGIRE
Sbjct: 256 TNQSSNKSEKEFTNDDAYIKETNSLLREFHHAIFSEQVFDLVNREAFNPSLGINVTGIRE 315

Query: 241 NYLQLSIDQGTSVFISLVPSSQSCQLVDGANTEILDNTNLPFDSLDGIELPDRDDHLEKK 300
           NYLQLSIDQGTSVFISLVPSSQSCQLVDGANTEILDNTNLPFDSLDGIELPDRDDHLEKK
Sbjct: 316 NYLQLSIDQGTSVFISLVPSSQSCQLVDGANTEILDNTNLPFDSLDGIELPDRDDHLEKK 375

Query: 301 LRNPNHITFEIYLQQIFHALVFVKSNDRAISAFSRQSAQVSNDGSGLLGHFCLSLAHRIF 360
           LRNPNHITFEIYLQQIFHALVFVKSNDRAISAFSRQSAQVSNDGSGLLGHFCLSLAHRIF
Sbjct: 376 LRNPNHITFEIYLQQIFHALVFVKSNDRAISAFSRQSAQVSNDGSGLLGHFCLSLAHRIF 435

Query: 361 ANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPRSILHPTSIQARTSDSHQMN 420
           ANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVP SILHPTSIQARTSDSHQMN
Sbjct: 436 ANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPLSILHPTSIQARTSDSHQMN 495

Query: 421 NVTKSLFQTKVVVNDNCITIEGEGAPNVVSLFKRNSKDIYSMNRYGCDLADLPVIILLQV 480
           NVTKS FQTKVVVNDNCITIEGEGAPNVVSLFKRNSKDIYSMNRYGCDLADLPVIILLQV
Sbjct: 496 NVTKSQFQTKVVVNDNCITIEGEGAPNVVSLFKRNSKDIYSMNRYGCDLADLPVIILLQV 555

Query: 481 ASQIVLWLHEEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPEDTQGCLSWWLVMDDG 540
           ASQIVLWLHEEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPED QGCLSWWLVMDDG
Sbjct: 556 ASQIVLWLHEEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPEDAQGCLSWWLVMDDG 615

Query: 541 LMDDRKLNFDISDVVPEYRKFLGHLSLEVLHSTLMDLVSLCSGFGSSL 589
           LMDDRKLNFDISDVVPEYRKFLGHLSLEVLHSTLMDLVSLCSGFGSSL
Sbjct: 616 LMDDRKLNFDISDVVPEYRKFLGHLSLEVLHSTLMDLVSLCSGFGSSL 663

[Close]

BLAST of Carg12153 vs. NCBI nr
Match: XP_023530911.1 (mediator of RNA polymerase II transcription subunit 17-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1154.4 bits (2985), Expect = 0.0e+00
Identity = 582/588 (98.98%), Postives = 586/588 (99.66%), Query Frame = 0


Query: 1   MIENLQLAHQELSVIIDLINTVEANDAVTVAGMTRPKLLPNEALSDLGVSVATKLQCFRH 60
           MIENLQLAHQELSVIIDLINTVEANDAVTVAGMTRPKLLPNEALSDLGVSVATKLQCFRH
Sbjct: 76  MIENLQLAHQELSVIIDLINTVEANDAVTVAGMTRPKLLPNEALSDLGVSVATKLQCFRH 135

Query: 61  LGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAAPAPANEGFTIDLFDSSS 120
           LGKYFKQSAKGLERQV+REARFYGALIRLQQNWKVKRQRVAAAPAPANEGFTIDLFDSSS
Sbjct: 136 LGKYFKQSAKGLERQVSREARFYGALIRLQQNWKVKRQRVAAAPAPANEGFTIDLFDSSS 195

Query: 121 CDPSSVFRPSSSTIRVEHDLSGMLTINLPPNSCHSLRFGFLSGCNVEDSLELGNNESTNS 180
           CDPSSVFRPSSSTIRVEHDLSGMLTINLPPNSCHSLRFGFLSGCNVE+SLELG NESTNS
Sbjct: 196 CDPSSVFRPSSSTIRVEHDLSGMLTINLPPNSCHSLRFGFLSGCNVENSLELGKNESTNS 255

Query: 181 TNQSSNKSEKEFTNDDAYIKETNSLLREVHHAIFSEQVFDLVNREAFNPSLGINVTGIRE 240
           TNQSSNKSEKEFTND+AYIKETNSLLREVHHAIFSEQVFDLVNREAFNPSLGINVTGIRE
Sbjct: 256 TNQSSNKSEKEFTNDNAYIKETNSLLREVHHAIFSEQVFDLVNREAFNPSLGINVTGIRE 315

Query: 241 NYLQLSIDQGTSVFISLVPSSQSCQLVDGANTEILDNTNLPFDSLDGIELPDRDDHLEKK 300
           NYLQLSIDQGTSVFISLVPSSQSCQLVDGANTEILDNTNLPFDSLDGIELPDRDDHLEKK
Sbjct: 316 NYLQLSIDQGTSVFISLVPSSQSCQLVDGANTEILDNTNLPFDSLDGIELPDRDDHLEKK 375

Query: 301 LRNPNHITFEIYLQQIFHALVFVKSNDRAISAFSRQSAQVSNDGSGLLGHFCLSLAHRIF 360
           LRNPNHITFEIYLQQIFHALVFVKSNDRAISAFSRQSAQVSNDGSGLLGHFCLSLAHRIF
Sbjct: 376 LRNPNHITFEIYLQQIFHALVFVKSNDRAISAFSRQSAQVSNDGSGLLGHFCLSLAHRIF 435

Query: 361 ANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPRSILHPTSIQARTSDSHQMN 420
           ANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPRSILHPTSIQARTSDSHQMN
Sbjct: 436 ANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPRSILHPTSIQARTSDSHQMN 495

Query: 421 NVTKSLFQTKVVVNDNCITIEGEGAPNVVSLFKRNSKDIYSMNRYGCDLADLPVIILLQV 480
           NVTKSLFQTKVVVNDNCITIEGEGAPNVVSLFKRNSKDIYSMNRYGCDLADLPVIILLQV
Sbjct: 496 NVTKSLFQTKVVVNDNCITIEGEGAPNVVSLFKRNSKDIYSMNRYGCDLADLPVIILLQV 555

Query: 481 ASQIVLWLHEEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPEDTQGCLSWWLVMDDG 540
           ASQIVLWLHEEALTWGIKANRDFLSLSFELEQGETLRLVAHV+PEDTQGCLSWWLVMDDG
Sbjct: 556 ASQIVLWLHEEALTWGIKANRDFLSLSFELEQGETLRLVAHVNPEDTQGCLSWWLVMDDG 615

Query: 541 LMDDRKLNFDISDVVPEYRKFLGHLSLEVLHSTLMDLVSLCSGFGSSL 589
           LMDDRKLNFDISDVVPEYRKFLGHLSLEVLH TLMDLVSLCSGFGSSL
Sbjct: 616 LMDDRKLNFDISDVVPEYRKFLGHLSLEVLHLTLMDLVSLCSGFGSSL 663

[Close]

BLAST of Carg12153 vs. NCBI nr
Match: XP_022932776.1 (mediator of RNA polymerase II transcription subunit 17-like [Cucurbita moschata])

HSP 1 Score: 1154.0 bits (2984), Expect = 0.0e+00
Identity = 582/588 (98.98%), Postives = 584/588 (99.32%), Query Frame = 0


Query: 1   MIENLQLAHQELSVIIDLINTVEANDAVTVAGMTRPKLLPNEALSDLGVSVATKLQCFRH 60
           MIENLQ AHQELSVIIDLINTVEANDAVTVAGMTRPKLLPNEALSDLGVSVATKLQCFRH
Sbjct: 76  MIENLQSAHQELSVIIDLINTVEANDAVTVAGMTRPKLLPNEALSDLGVSVATKLQCFRH 135

Query: 61  LGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAAPAPANEGFTIDLFDSSS 120
           LGKYFKQSAKGLERQV REARFYGALIRLQQNWKVKRQRVAAAPAPANEGFTIDLFDSSS
Sbjct: 136 LGKYFKQSAKGLERQVVREARFYGALIRLQQNWKVKRQRVAAAPAPANEGFTIDLFDSSS 195

Query: 121 CDPSSVFRPSSSTIRVEHDLSGMLTINLPPNSCHSLRFGFLSGCNVEDSLELGNNESTNS 180
           CDPSSVFRPSSSTIRVEHDLSGMLTINLPPNSCHSLRFGFLSGCNVE+SLELG NESTNS
Sbjct: 196 CDPSSVFRPSSSTIRVEHDLSGMLTINLPPNSCHSLRFGFLSGCNVENSLELGKNESTNS 255

Query: 181 TNQSSNKSEKEFTNDDAYIKETNSLLREVHHAIFSEQVFDLVNREAFNPSLGINVTGIRE 240
           TNQSSNKSEKEFTNDDAYIKETNSLLREVHHAIFSEQVFDLVNREAFNPSLGINVTGIRE
Sbjct: 256 TNQSSNKSEKEFTNDDAYIKETNSLLREVHHAIFSEQVFDLVNREAFNPSLGINVTGIRE 315

Query: 241 NYLQLSIDQGTSVFISLVPSSQSCQLVDGANTEILDNTNLPFDSLDGIELPDRDDHLEKK 300
           NYLQLSIDQGTSVFISLVPSSQSCQLVDGANTEILDNTNLPFDSLDGIELPDRDDHLEKK
Sbjct: 316 NYLQLSIDQGTSVFISLVPSSQSCQLVDGANTEILDNTNLPFDSLDGIELPDRDDHLEKK 375

Query: 301 LRNPNHITFEIYLQQIFHALVFVKSNDRAISAFSRQSAQVSNDGSGLLGHFCLSLAHRIF 360
           LRNPNHITFEIYLQQIFHALVFVKSNDRAISAFSRQS QVSNDGSGLLGHFCLSLAHRIF
Sbjct: 376 LRNPNHITFEIYLQQIFHALVFVKSNDRAISAFSRQSPQVSNDGSGLLGHFCLSLAHRIF 435

Query: 361 ANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPRSILHPTSIQARTSDSHQMN 420
           ANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPRSILHPTSIQARTSDSHQMN
Sbjct: 436 ANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPRSILHPTSIQARTSDSHQMN 495

Query: 421 NVTKSLFQTKVVVNDNCITIEGEGAPNVVSLFKRNSKDIYSMNRYGCDLADLPVIILLQV 480
           +VTKSLFQTKVVVNDNCITIEGEGAPNVVSLFKRNSKDIYSMNRYGCDLADLPVIILLQV
Sbjct: 496 DVTKSLFQTKVVVNDNCITIEGEGAPNVVSLFKRNSKDIYSMNRYGCDLADLPVIILLQV 555

Query: 481 ASQIVLWLHEEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPEDTQGCLSWWLVMDDG 540
           ASQIVLWLHEEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPEDTQGCLSWWLVMDDG
Sbjct: 556 ASQIVLWLHEEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPEDTQGCLSWWLVMDDG 615

Query: 541 LMDDRKLNFDISDVVPEYRKFLGHLSLEVLHSTLMDLVSLCSGFGSSL 589
           LMDDRKLNFDISDVVPEYRKFLGHLSLEVLHSTLMDLVSLCSGFGSSL
Sbjct: 616 LMDDRKLNFDISDVVPEYRKFLGHLSLEVLHSTLMDLVSLCSGFGSSL 663

[Close]

BLAST of Carg12153 vs. ExPASy Swiss-Prot
Match: F4K460 (Mediator of RNA polymerase II transcription subunit 17 OS=Arabidopsis thaliana OX=3702 GN=MED17 PE=1 SV=1)

HSP 1 Score: 614.4 bits (1583), Expect = 1.4e-174
Identity = 330/583 (56.60%), Postives = 429/583 (73.58%), Query Frame = 0


Query: 1   MIENLQLAHQELSVIIDLINTVEANDAVTVAGMTRPKLLPNEALSDLGVSVATKLQCFRH 60
           M+ENLQLAHQEL+VIIDLI+TV+ANDAVTVAGMTRPK +PNE LSDL VS ATKLQ +R+
Sbjct: 78  MVENLQLAHQELTVIIDLIDTVQANDAVTVAGMTRPKPMPNEILSDLAVSTATKLQGYRN 137

Query: 61  LGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAAPAPANEGFTIDLFDSSS 120
           LG YFKQSAK LE+++ REARFYGALIRLQ+NWKVKRQR+ A+ A +NEGFTIDL DSS 
Sbjct: 138 LGNYFKQSAKALEQKINREARFYGALIRLQRNWKVKRQRMLASNA-SNEGFTIDLSDSSL 197

Query: 121 CDPSSVFRPSS-STIRVEHDLSGMLTINLPPNSCHSLRFGFLSGCNVEDSLELGNNESTN 180
            DP+S FRPS+ STIRV+HD +GML IN+P +S +SLRFG++    + +S E   +  + 
Sbjct: 198 YDPTSGFRPSTLSTIRVDHDSAGMLAINVPQDSWYSLRFGYVGLNPIGNSNESDEHIDST 257

Query: 181 STNQSSNKSEKEFTNDDAYIKETNSLLREVHHAIFSEQVFDLVNREAFNPSLGINVTGIR 240
           + +     SEK   +DD Y+KET+SLLREVH +IF+EQ+FD++NREAFN  +G N++G+R
Sbjct: 258 TGHDIPGTSEKLSASDDKYVKETHSLLREVHKSIFAEQLFDMLNREAFNEGVGFNISGLR 317

Query: 241 ENYLQLSIDQGTSVFISLVPSSQSCQLVDGANTEILDNTNLPFDSLDGIELPDRDDHLEK 300
           EN++++SI QG S+F+SL PS ++  +    +  +L       +S   +E  +  D+  K
Sbjct: 318 ENFMEMSIGQGASLFVSLHPSGKNPSIKKSESATLL------IESSGRVEPAEGGDYRLK 377

Query: 301 KLRNPNHITFEIYLQQIFHALVFVKSNDRAISAFSRQSAQVSND-GSGLLGHFCLSLAHR 360
           KL  PN  ++EIYLQQIFH   F K+ D+  S   R S Q   D  SGLL HFCLSL HR
Sbjct: 378 KLGFPNRTSYEIYLQQIFHEHAFGKAKDQLKSKSIRASNQTEKDSNSGLLDHFCLSLTHR 437

Query: 361 IFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPRSILHPTSIQARTSDSHQ 420
           IF+N VL+ LE+VV KVP+L LISHPTWNSR SSWT FM VP SI+     + ++ D  +
Sbjct: 438 IFSNRVLVHLESVVCKVPYLHLISHPTWNSRTSSWTVFMTVPPSIIPQGRSETQSPDGKR 497

Query: 421 MNNVTKSLFQTKVVVNDNCITIEGEGAPNVVSLFKRNSKDIYSMNRYGCDLADLPVIILL 480
                K+ F+TKVVV D+CI++E E  PNVV L K +S +++S+N+Y CD+ADLPV+IL 
Sbjct: 498 N---LKTQFRTKVVVKDDCISVEAECTPNVVGLLKSSSCNLFSINKYECDVADLPVMILQ 557

Query: 481 QVASQIVLWLHEEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPEDTQGCLSWWLVMD 540
           QVASQIV WL EEA T G KA+R+FLSLS E+ +GE + LVAHV+PED +GC+SWWLVM+
Sbjct: 558 QVASQIVCWLLEEARTVGTKASREFLSLSLEIVEGERVSLVAHVNPEDAKGCISWWLVME 617

Query: 541 DGLMDDRKLNFDISDVVPEYRKFLGHLSLEVLHSTLMDLVSLC 582
           +G  ++R       + V E RK LGHLSL+VL+S LMDL++LC
Sbjct: 618 NGCTEER-------EGVSESRKLLGHLSLDVLYSVLMDLINLC 643

[Close]

BLAST of Carg12153 vs. ExPASy TrEMBL
Match: A0A6J1KUD0 (mediator of RNA polymerase II transcription subunit 17-like OS=Cucurbita maxima OX=3661 GN=LOC111498312 PE=3 SV=1)

HSP 1 Score: 1154.8 bits (2986), Expect = 0.0e+00
Identity = 582/588 (98.98%), Postives = 584/588 (99.32%), Query Frame = 0


Query: 1   MIENLQLAHQELSVIIDLINTVEANDAVTVAGMTRPKLLPNEALSDLGVSVATKLQCFRH 60
           MIENLQLAHQELSVIIDLINTVEANDA+TVAGMTRPKLLPNEALSDLGVSVATKLQCFRH
Sbjct: 76  MIENLQLAHQELSVIIDLINTVEANDAITVAGMTRPKLLPNEALSDLGVSVATKLQCFRH 135

Query: 61  LGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAAPAPANEGFTIDLFDSSS 120
           LGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAAPAPANEGFTIDLFDSSS
Sbjct: 136 LGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAAPAPANEGFTIDLFDSSS 195

Query: 121 CDPSSVFRPSSSTIRVEHDLSGMLTINLPPNSCHSLRFGFLSGCNVEDSLELGNNESTNS 180
           CDPSSVFRPSSSTIRVEHDLSGMLTINLPPNSCHSLRFGFLSGCNVE+SLELGNNESTNS
Sbjct: 196 CDPSSVFRPSSSTIRVEHDLSGMLTINLPPNSCHSLRFGFLSGCNVENSLELGNNESTNS 255

Query: 181 TNQSSNKSEKEFTNDDAYIKETNSLLREVHHAIFSEQVFDLVNREAFNPSLGINVTGIRE 240
           TNQSSNKSEKEFTNDDAYIKETNSLLRE HHAIFSEQVFDLVNREAFNPSLGINVTGIRE
Sbjct: 256 TNQSSNKSEKEFTNDDAYIKETNSLLREFHHAIFSEQVFDLVNREAFNPSLGINVTGIRE 315

Query: 241 NYLQLSIDQGTSVFISLVPSSQSCQLVDGANTEILDNTNLPFDSLDGIELPDRDDHLEKK 300
           NYLQLSIDQGTSVFISLVPSSQSCQLVDGANTEILDNTNLPFDSLDGIELPDRDDHLEKK
Sbjct: 316 NYLQLSIDQGTSVFISLVPSSQSCQLVDGANTEILDNTNLPFDSLDGIELPDRDDHLEKK 375

Query: 301 LRNPNHITFEIYLQQIFHALVFVKSNDRAISAFSRQSAQVSNDGSGLLGHFCLSLAHRIF 360
           LRNPNHITFEIYLQQIFHALVFVKSNDRAISAFSRQSAQVSNDGSGLLGHFCLSLAHRIF
Sbjct: 376 LRNPNHITFEIYLQQIFHALVFVKSNDRAISAFSRQSAQVSNDGSGLLGHFCLSLAHRIF 435

Query: 361 ANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPRSILHPTSIQARTSDSHQMN 420
           ANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVP SILHPTSIQARTSDSHQMN
Sbjct: 436 ANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPLSILHPTSIQARTSDSHQMN 495

Query: 421 NVTKSLFQTKVVVNDNCITIEGEGAPNVVSLFKRNSKDIYSMNRYGCDLADLPVIILLQV 480
           NVTKS FQTKVVVNDNCITIEGEGAPNVVSLFKRNSKDIYSMNRYGCDLADLPVIILLQV
Sbjct: 496 NVTKSQFQTKVVVNDNCITIEGEGAPNVVSLFKRNSKDIYSMNRYGCDLADLPVIILLQV 555

Query: 481 ASQIVLWLHEEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPEDTQGCLSWWLVMDDG 540
           ASQIVLWLHEEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPED QGCLSWWLVMDDG
Sbjct: 556 ASQIVLWLHEEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPEDAQGCLSWWLVMDDG 615

Query: 541 LMDDRKLNFDISDVVPEYRKFLGHLSLEVLHSTLMDLVSLCSGFGSSL 589
           LMDDRKLNFDISDVVPEYRKFLGHLSLEVLHSTLMDLVSLCSGFGSSL
Sbjct: 616 LMDDRKLNFDISDVVPEYRKFLGHLSLEVLHSTLMDLVSLCSGFGSSL 663

[Close]

BLAST of Carg12153 vs. ExPASy TrEMBL
Match: A0A6J1EXB9 (mediator of RNA polymerase II transcription subunit 17-like OS=Cucurbita moschata OX=3662 GN=LOC111439222 PE=3 SV=1)

HSP 1 Score: 1154.0 bits (2984), Expect = 0.0e+00
Identity = 582/588 (98.98%), Postives = 584/588 (99.32%), Query Frame = 0


Query: 1   MIENLQLAHQELSVIIDLINTVEANDAVTVAGMTRPKLLPNEALSDLGVSVATKLQCFRH 60
           MIENLQ AHQELSVIIDLINTVEANDAVTVAGMTRPKLLPNEALSDLGVSVATKLQCFRH
Sbjct: 76  MIENLQSAHQELSVIIDLINTVEANDAVTVAGMTRPKLLPNEALSDLGVSVATKLQCFRH 135

Query: 61  LGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAAPAPANEGFTIDLFDSSS 120
           LGKYFKQSAKGLERQV REARFYGALIRLQQNWKVKRQRVAAAPAPANEGFTIDLFDSSS
Sbjct: 136 LGKYFKQSAKGLERQVVREARFYGALIRLQQNWKVKRQRVAAAPAPANEGFTIDLFDSSS 195

Query: 121 CDPSSVFRPSSSTIRVEHDLSGMLTINLPPNSCHSLRFGFLSGCNVEDSLELGNNESTNS 180
           CDPSSVFRPSSSTIRVEHDLSGMLTINLPPNSCHSLRFGFLSGCNVE+SLELG NESTNS
Sbjct: 196 CDPSSVFRPSSSTIRVEHDLSGMLTINLPPNSCHSLRFGFLSGCNVENSLELGKNESTNS 255

Query: 181 TNQSSNKSEKEFTNDDAYIKETNSLLREVHHAIFSEQVFDLVNREAFNPSLGINVTGIRE 240
           TNQSSNKSEKEFTNDDAYIKETNSLLREVHHAIFSEQVFDLVNREAFNPSLGINVTGIRE
Sbjct: 256 TNQSSNKSEKEFTNDDAYIKETNSLLREVHHAIFSEQVFDLVNREAFNPSLGINVTGIRE 315

Query: 241 NYLQLSIDQGTSVFISLVPSSQSCQLVDGANTEILDNTNLPFDSLDGIELPDRDDHLEKK 300
           NYLQLSIDQGTSVFISLVPSSQSCQLVDGANTEILDNTNLPFDSLDGIELPDRDDHLEKK
Sbjct: 316 NYLQLSIDQGTSVFISLVPSSQSCQLVDGANTEILDNTNLPFDSLDGIELPDRDDHLEKK 375

Query: 301 LRNPNHITFEIYLQQIFHALVFVKSNDRAISAFSRQSAQVSNDGSGLLGHFCLSLAHRIF 360
           LRNPNHITFEIYLQQIFHALVFVKSNDRAISAFSRQS QVSNDGSGLLGHFCLSLAHRIF
Sbjct: 376 LRNPNHITFEIYLQQIFHALVFVKSNDRAISAFSRQSPQVSNDGSGLLGHFCLSLAHRIF 435

Query: 361 ANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPRSILHPTSIQARTSDSHQMN 420
           ANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPRSILHPTSIQARTSDSHQMN
Sbjct: 436 ANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPRSILHPTSIQARTSDSHQMN 495

Query: 421 NVTKSLFQTKVVVNDNCITIEGEGAPNVVSLFKRNSKDIYSMNRYGCDLADLPVIILLQV 480
           +VTKSLFQTKVVVNDNCITIEGEGAPNVVSLFKRNSKDIYSMNRYGCDLADLPVIILLQV
Sbjct: 496 DVTKSLFQTKVVVNDNCITIEGEGAPNVVSLFKRNSKDIYSMNRYGCDLADLPVIILLQV 555

Query: 481 ASQIVLWLHEEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPEDTQGCLSWWLVMDDG 540
           ASQIVLWLHEEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPEDTQGCLSWWLVMDDG
Sbjct: 556 ASQIVLWLHEEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPEDTQGCLSWWLVMDDG 615

Query: 541 LMDDRKLNFDISDVVPEYRKFLGHLSLEVLHSTLMDLVSLCSGFGSSL 589
           LMDDRKLNFDISDVVPEYRKFLGHLSLEVLHSTLMDLVSLCSGFGSSL
Sbjct: 616 LMDDRKLNFDISDVVPEYRKFLGHLSLEVLHSTLMDLVSLCSGFGSSL 663

[Close]

BLAST of Carg12153 vs. ExPASy TrEMBL
Match: A0A6J1CVE8 (Mediator of RNA polymerase II transcription subunit 17 OS=Momordica charantia OX=3673 GN=LOC111014574 PE=3 SV=1)

HSP 1 Score: 1052.7 bits (2721), Expect = 5.5e-304
Identity = 535/588 (90.99%), Postives = 551/588 (93.71%), Query Frame = 0


Query: 1   MIENLQLAHQELSVIIDLINTVEANDAVTVAGMTRPKLLPNEALSDLGVSVATKLQCFRH 60
           MIENLQLAHQELSVIIDLINTVEANDAVTVAGMTRPK LPNE LSDLGVSVATKLQCFRH
Sbjct: 76  MIENLQLAHQELSVIIDLINTVEANDAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRH 135

Query: 61  LGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAAPAPANEGFTIDLFDSSS 120
           LGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRV AAPAPANEGFTIDLFD+SS
Sbjct: 136 LGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRV-AAPAPANEGFTIDLFDNSS 195

Query: 121 CDPSSVFRPSSSTIRVEHDLSGMLTINLPPNSCHSLRFGFLSGCNVEDSLELGNNESTNS 180
           CDPSSVFRPSSSTIRV+HD SGML INLP NSCHS+RFGFLSGCNVE+ LE G NESTNS
Sbjct: 196 CDPSSVFRPSSSTIRVDHDSSGMLAINLPSNSCHSIRFGFLSGCNVENPLERGKNESTNS 255

Query: 181 TNQSSNKSEKEFTNDDAYIKETNSLLREVHHAIFSEQVFDLVNREAFNPSLGINVTGIRE 240
           +NQSS K E EFTNDD YIKETNSLLREVHHAIFSEQVFDLVNREAFNPSLGINVTGIRE
Sbjct: 256 SNQSSIKGE-EFTNDDEYIKETNSLLREVHHAIFSEQVFDLVNREAFNPSLGINVTGIRE 315

Query: 241 NYLQLSIDQGTSVFISLVPSSQSCQLVDGANTEILDNTNLPFDSLDGIELPDRDDHLEKK 300
           NYLQLSIDQ TSVFISLVPSS+SCQ+VDGANT+ILDNTNLPFDSLDGIELPDR D LEKK
Sbjct: 316 NYLQLSIDQSTSVFISLVPSSKSCQIVDGANTKILDNTNLPFDSLDGIELPDRSDSLEKK 375

Query: 301 LRNPNHITFEIYLQQIFHALVFVKSNDRAISAFSRQSAQVSNDGSGLLGHFCLSLAHRIF 360
           LRNPNHI FEIYLQQIFH LVFVKSNDR ISA SRQ +Q SNDGSGLLGHFCLSLAHRIF
Sbjct: 376 LRNPNHINFEIYLQQIFHELVFVKSNDRPISALSRQLSQPSNDGSGLLGHFCLSLAHRIF 435

Query: 361 ANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPRSILHPTSIQARTSDSHQMN 420
           AN+VLMELENVVWKVP LQLISHPTWNSRKSSWTFFMEVPRSI+HP  IQARTSD HQM 
Sbjct: 436 ANSVLMELENVVWKVPCLQLISHPTWNSRKSSWTFFMEVPRSIVHPNGIQARTSDRHQMK 495

Query: 421 NVTKSLFQTKVVVNDNCITIEGEGAPNVVSLFKRNSKDIYSMNRYGCDLADLPVIILLQV 480
           NVTKS FQTKVVVND+CITIEGEGAPNVV L K NSK+IYSMNRYGCDLADLPVIILLQV
Sbjct: 496 NVTKSQFQTKVVVNDDCITIEGEGAPNVVGLCKGNSKNIYSMNRYGCDLADLPVIILLQV 555

Query: 481 ASQIVLWLHEEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPEDTQGCLSWWLVMDDG 540
           A QI+LWLH EALTWGIKANRDFLSLSFELEQGETLRLVAHVDPED QGCLSWWLVMDD 
Sbjct: 556 AGQIILWLHGEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPEDAQGCLSWWLVMDDD 615

Query: 541 LMDDRKLNFDISDVVPEYRKFLGHLSLEVLHSTLMDLVSLCSGFGSSL 589
           LM+DRKLNFDISDVVPEYRKFLG+LSLEVLHSTLMDLVSLCSGFG  L
Sbjct: 616 LMEDRKLNFDISDVVPEYRKFLGYLSLEVLHSTLMDLVSLCSGFGGGL 661

[Close]

BLAST of Carg12153 vs. ExPASy TrEMBL
Match: A0A1S4E2I2 (Mediator of RNA polymerase II transcription subunit 17 OS=Cucumis melo OX=3656 GN=LOC103498687 PE=3 SV=1)

HSP 1 Score: 1051.2 bits (2717), Expect = 1.6e-303
Identity = 530/588 (90.14%), Postives = 551/588 (93.71%), Query Frame = 0


Query: 1   MIENLQLAHQELSVIIDLINTVEANDAVTVAGMTRPKLLPNEALSDLGVSVATKLQCFRH 60
           MIENLQLAHQELSVIIDLINTVEANDAVTVAGMTRPK LPNE L+DLGVSVATKLQCFRH
Sbjct: 76  MIENLQLAHQELSVIIDLINTVEANDAVTVAGMTRPKPLPNEVLADLGVSVATKLQCFRH 135

Query: 61  LGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAAPAPANEGFTIDLFDSSS 120
           LGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRV AAPAPANEGFTIDLFD+SS
Sbjct: 136 LGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRV-AAPAPANEGFTIDLFDNSS 195

Query: 121 CDPSSVFRPSSSTIRVEHDLSGMLTINLPPNSCHSLRFGFLSGCNVEDSLELGNNESTNS 180
           CDPSSVFRPSSSTIRV+HD SGML INLPPNSCHSLRFGFLSGCNVE+ LE   N++TN 
Sbjct: 196 CDPSSVFRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNVENPLEHDKNDTTNP 255

Query: 181 TNQSSNKSEKEFTNDDAYIKETNSLLREVHHAIFSEQVFDLVNREAFNPSLGINVTGIRE 240
           +NQ+S K EKEFTNDD YIKETNSLLR+VHHAIF EQVFDLVN EAFNPS+GINVTGIRE
Sbjct: 256 SNQTSVKREKEFTNDDEYIKETNSLLRQVHHAIFCEQVFDLVNHEAFNPSVGINVTGIRE 315

Query: 241 NYLQLSIDQGTSVFISLVPSSQSCQLVDGANTEILDNTNLPFDSLDGIELPDRDDHLEKK 300
           NYLQLSIDQGTSVFISLVPS QSCQ V+GAN+EILDN NLPFDSLDGIELPDR D LEKK
Sbjct: 316 NYLQLSIDQGTSVFISLVPSGQSCQTVEGANSEILDNANLPFDSLDGIELPDRSDPLEKK 375

Query: 301 LRNPNHITFEIYLQQIFHALVFVKSNDRAISAFSRQSAQVSNDGSGLLGHFCLSLAHRIF 360
           LRNPNHITFEIYLQQIFH LVFVKSNDR IS+ SRQS QVSNDGSGLLGHFCLSLAHR+F
Sbjct: 376 LRNPNHITFEIYLQQIFHELVFVKSNDRPISSLSRQSGQVSNDGSGLLGHFCLSLAHRMF 435

Query: 361 ANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPRSILHPTSIQARTSDSHQMN 420
           ANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPRSILHP SIQARTSDS+QMN
Sbjct: 436 ANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPRSILHPNSIQARTSDSYQMN 495

Query: 421 NVTKSLFQTKVVVNDNCITIEGEGAPNVVSLFKRNSKDIYSMNRYGCDLADLPVIILLQV 480
           NVTK+ F TKVVVND+CITIEGEGAPNVV LF  NSKDIY  NRY CDLADLPVIILLQV
Sbjct: 496 NVTKTQFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIYLTNRYSCDLADLPVIILLQV 555

Query: 481 ASQIVLWLHEEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPEDTQGCLSWWLVMDDG 540
           ASQI+LWLHEEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPED QGCLSWWLVMDDG
Sbjct: 556 ASQIILWLHEEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPEDPQGCLSWWLVMDDG 615

Query: 541 LMDDRKLNFDISDVVPEYRKFLGHLSLEVLHSTLMDLVSLCSGFGSSL 589
           LM+DRKLNF+ SDVVPEYRKFLG+LSLEVLHSTLMDLVSLCSG G SL
Sbjct: 616 LMEDRKLNFETSDVVPEYRKFLGNLSLEVLHSTLMDLVSLCSGVGGSL 662

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BLAST of Carg12153 vs. ExPASy TrEMBL
Match: A0A5D3BMZ9 (Mediator of RNA polymerase II transcription subunit 17 OS=Cucumis melo var. makuwa OX=1194695 GN=MED17 PE=3 SV=1)

HSP 1 Score: 1051.2 bits (2717), Expect = 1.6e-303
Identity = 530/588 (90.14%), Postives = 551/588 (93.71%), Query Frame = 0


Query: 1   MIENLQLAHQELSVIIDLINTVEANDAVTVAGMTRPKLLPNEALSDLGVSVATKLQCFRH 60
           MIENLQLAHQELSVIIDLINTVEANDAVTVAGMTRPK LPNE L+DLGVSVATKLQCFRH
Sbjct: 76  MIENLQLAHQELSVIIDLINTVEANDAVTVAGMTRPKPLPNEVLADLGVSVATKLQCFRH 135

Query: 61  LGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAAPAPANEGFTIDLFDSSS 120
           LGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRV AAPAPANEGFTIDLFD+SS
Sbjct: 136 LGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRV-AAPAPANEGFTIDLFDNSS 195

Query: 121 CDPSSVFRPSSSTIRVEHDLSGMLTINLPPNSCHSLRFGFLSGCNVEDSLELGNNESTNS 180
           CDPSSVFRPSSSTIRV+HD SGML INLPPNSCHSLRFGFLSGCNVE+ LE   N++TN 
Sbjct: 196 CDPSSVFRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNVENPLEHDKNDTTNP 255

Query: 181 TNQSSNKSEKEFTNDDAYIKETNSLLREVHHAIFSEQVFDLVNREAFNPSLGINVTGIRE 240
           +NQ+S K EKEFTNDD YIKETNSLLR+VHHAIF EQVFDLVN EAFNPS+GINVTGIRE
Sbjct: 256 SNQTSVKREKEFTNDDEYIKETNSLLRQVHHAIFCEQVFDLVNHEAFNPSVGINVTGIRE 315

Query: 241 NYLQLSIDQGTSVFISLVPSSQSCQLVDGANTEILDNTNLPFDSLDGIELPDRDDHLEKK 300
           NYLQLSIDQGTSVFISLVPS QSCQ V+GAN+EILDN NLPFDSLDGIELPDR D LEKK
Sbjct: 316 NYLQLSIDQGTSVFISLVPSGQSCQTVEGANSEILDNANLPFDSLDGIELPDRSDPLEKK 375

Query: 301 LRNPNHITFEIYLQQIFHALVFVKSNDRAISAFSRQSAQVSNDGSGLLGHFCLSLAHRIF 360
           LRNPNHITFEIYLQQIFH LVFVKSNDR IS+ SRQS QVSNDGSGLLGHFCLSLAHR+F
Sbjct: 376 LRNPNHITFEIYLQQIFHELVFVKSNDRPISSLSRQSGQVSNDGSGLLGHFCLSLAHRMF 435

Query: 361 ANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPRSILHPTSIQARTSDSHQMN 420
           ANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPRSILHP SIQARTSDS+QMN
Sbjct: 436 ANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPRSILHPNSIQARTSDSYQMN 495

Query: 421 NVTKSLFQTKVVVNDNCITIEGEGAPNVVSLFKRNSKDIYSMNRYGCDLADLPVIILLQV 480
           NVTK+ F TKVVVND+CITIEGEGAPNVV LF  NSKDIY  NRY CDLADLPVIILLQV
Sbjct: 496 NVTKTQFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIYLTNRYSCDLADLPVIILLQV 555

Query: 481 ASQIVLWLHEEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPEDTQGCLSWWLVMDDG 540
           ASQI+LWLHEEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPED QGCLSWWLVMDDG
Sbjct: 556 ASQIILWLHEEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPEDPQGCLSWWLVMDDG 615

Query: 541 LMDDRKLNFDISDVVPEYRKFLGHLSLEVLHSTLMDLVSLCSGFGSSL 589
           LM+DRKLNF+ SDVVPEYRKFLG+LSLEVLHSTLMDLVSLCSG G SL
Sbjct: 616 LMEDRKLNFETSDVVPEYRKFLGNLSLEVLHSTLMDLVSLCSGVGGSL 662

[Close]

BLAST of Carg12153 vs. TAIR 10
Match: AT5G20170.1 (RNA polymerase II transcription mediators )

HSP 1 Score: 614.4 bits (1583), Expect = 9.6e-176
Identity = 330/583 (56.60%), Postives = 429/583 (73.58%), Query Frame = 0


Query: 1   MIENLQLAHQELSVIIDLINTVEANDAVTVAGMTRPKLLPNEALSDLGVSVATKLQCFRH 60
           M+ENLQLAHQEL+VIIDLI+TV+ANDAVTVAGMTRPK +PNE LSDL VS ATKLQ +R+
Sbjct: 78  MVENLQLAHQELTVIIDLIDTVQANDAVTVAGMTRPKPMPNEILSDLAVSTATKLQGYRN 137

Query: 61  LGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAAPAPANEGFTIDLFDSSS 120
           LG YFKQSAK LE+++ REARFYGALIRLQ+NWKVKRQR+ A+ A +NEGFTIDL DSS 
Sbjct: 138 LGNYFKQSAKALEQKINREARFYGALIRLQRNWKVKRQRMLASNA-SNEGFTIDLSDSSL 197

Query: 121 CDPSSVFRPSS-STIRVEHDLSGMLTINLPPNSCHSLRFGFLSGCNVEDSLELGNNESTN 180
            DP+S FRPS+ STIRV+HD +GML IN+P +S +SLRFG++    + +S E   +  + 
Sbjct: 198 YDPTSGFRPSTLSTIRVDHDSAGMLAINVPQDSWYSLRFGYVGLNPIGNSNESDEHIDST 257

Query: 181 STNQSSNKSEKEFTNDDAYIKETNSLLREVHHAIFSEQVFDLVNREAFNPSLGINVTGIR 240
           + +     SEK   +DD Y+KET+SLLREVH +IF+EQ+FD++NREAFN  +G N++G+R
Sbjct: 258 TGHDIPGTSEKLSASDDKYVKETHSLLREVHKSIFAEQLFDMLNREAFNEGVGFNISGLR 317

Query: 241 ENYLQLSIDQGTSVFISLVPSSQSCQLVDGANTEILDNTNLPFDSLDGIELPDRDDHLEK 300
           EN++++SI QG S+F+SL PS ++  +    +  +L       +S   +E  +  D+  K
Sbjct: 318 ENFMEMSIGQGASLFVSLHPSGKNPSIKKSESATLL------IESSGRVEPAEGGDYRLK 377

Query: 301 KLRNPNHITFEIYLQQIFHALVFVKSNDRAISAFSRQSAQVSND-GSGLLGHFCLSLAHR 360
           KL  PN  ++EIYLQQIFH   F K+ D+  S   R S Q   D  SGLL HFCLSL HR
Sbjct: 378 KLGFPNRTSYEIYLQQIFHEHAFGKAKDQLKSKSIRASNQTEKDSNSGLLDHFCLSLTHR 437

Query: 361 IFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPRSILHPTSIQARTSDSHQ 420
           IF+N VL+ LE+VV KVP+L LISHPTWNSR SSWT FM VP SI+     + ++ D  +
Sbjct: 438 IFSNRVLVHLESVVCKVPYLHLISHPTWNSRTSSWTVFMTVPPSIIPQGRSETQSPDGKR 497

Query: 421 MNNVTKSLFQTKVVVNDNCITIEGEGAPNVVSLFKRNSKDIYSMNRYGCDLADLPVIILL 480
                K+ F+TKVVV D+CI++E E  PNVV L K +S +++S+N+Y CD+ADLPV+IL 
Sbjct: 498 N---LKTQFRTKVVVKDDCISVEAECTPNVVGLLKSSSCNLFSINKYECDVADLPVMILQ 557

Query: 481 QVASQIVLWLHEEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPEDTQGCLSWWLVMD 540
           QVASQIV WL EEA T G KA+R+FLSLS E+ +GE + LVAHV+PED +GC+SWWLVM+
Sbjct: 558 QVASQIVCWLLEEARTVGTKASREFLSLSLEIVEGERVSLVAHVNPEDAKGCISWWLVME 617

Query: 541 DGLMDDRKLNFDISDVVPEYRKFLGHLSLEVLHSTLMDLVSLC 582
           +G  ++R       + V E RK LGHLSL+VL+S LMDL++LC
Sbjct: 618 NGCTEER-------EGVSESRKLLGHLSLDVLYSVLMDLINLC 643

The following BLAST results are available for this feature:

BLAST of Carg12153 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7021807.1	0.0e+00	100.00	Mediator of RNA polymerase II transcription subunit 17 [Cucurbita argyrosperma s...	[more]
KAG6587922.1	0.0e+00	99.49	Mediator of RNA polymerase II transcription subunit 17, partial [Cucurbita argyr...	[more]
XP_023005226.1	0.0e+00	98.98	mediator of RNA polymerase II transcription subunit 17-like [Cucurbita maxima]	[more]
XP_023530911.1	0.0e+00	98.98	mediator of RNA polymerase II transcription subunit 17-like [Cucurbita pepo subs...	[more]
XP_022932776.1	0.0e+00	98.98	mediator of RNA polymerase II transcription subunit 17-like [Cucurbita moschata]	[more]

BLAST of Carg12153 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4K460	1.4e-174	56.60	Mediator of RNA polymerase II transcription subunit 17 OS=Arabidopsis thaliana O...	[more]

BLAST of Carg12153 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KUD0	0.0e+00	98.98	mediator of RNA polymerase II transcription subunit 17-like OS=Cucurbita maxima ...	[more]
A0A6J1EXB9	0.0e+00	98.98	mediator of RNA polymerase II transcription subunit 17-like OS=Cucurbita moschat...	[more]
A0A6J1CVE8	5.5e-304	90.99	Mediator of RNA polymerase II transcription subunit 17 OS=Momordica charantia OX...	[more]
A0A1S4E2I2	1.6e-303	90.14	Mediator of RNA polymerase II transcription subunit 17 OS=Cucumis melo OX=3656 G...	[more]
A0A5D3BMZ9	1.6e-303	90.14	Mediator of RNA polymerase II transcription subunit 17 OS=Cucumis melo var. maku...	[more]

BLAST of Carg12153 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G20170.1	9.6e-176	56.60	RNA polymerase II transcription mediators	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 172..188
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 172..194
IPR019313	Mediator complex, subunit Med17	PANTHER	PTHR13114	MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 17	coord: 1..579

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg12153-RA	Carg12153-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
cellular_component	GO:0070847	core mediator complex
cellular_component	GO:0016592	mediator complex
molecular_function	GO:0003712	transcription coregulator activity