Carg12056 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGCTGCATTTTTTCTAAAGAAAACAGACAATTTCCAGGATATGAAGATCCTATAAATCTTGCTTCACAAACAGCTTGTAAGTAGTGCTTTGTTTATGTTTTCTGAGTTCTGAGTTTCTAGATTTAATGACTAACTTTTGGACTATTTCTATTGAATCTATGCTCTCCCGATGCTTTCTAGCTATCGAGATACGTTCATGTCGGTCTGAATTTCTCTCATATATTATTCATGATTCTTCTTGTTCTTTATACTTGCTTCAACAGTTAGTGTCAGTGAAGTTGAAGCATTGTTTGAGCTGTACAAGAGCATCAGCAGTTCTATCATAGATGATGGTTTAATAAACAGGGTATTTGTTTCTGATATGACTTATCATTCCGGTGTTCGTGTTATCATCCCTCTCTTCATGTCTGTGCAAGAACTATTTGAACTCACATTGTTTTGGTTAAATAATGTGTACATGTATAGCAGTGAGGATAATGCCATTGATTTTGCTGGTTTAGTTGGATTAGTCAAACGTATGTGTTCTATGCAACAGTGATTTGAAGATGTTCTCTATAACGATCTCGTTCTATATGCAGGAAGAATTTCAGCTGGCCATTTTTAATAACAGAAAGAAGGAAAATCTGTTAGCAAATCGGGTAAATATATAAGCTTTTATCTTAAATTCCTTACCAAAAGTGTTAGCGTGTAAGATCCCATATCAGTTGGAGAGGAGAACGAAGCATTCTTTATAAAGGTGTGGAAACCTCTCCCTAGCATACACGTTATAAAAACCTTTAGGGGAAGCCCGAAAGGGAAAACTCGAAGAGGATAATATCTGCTAGCGGTGGGCTTAGGTTGTTACAAATGGTATCAAAACCAAACACCGAGCGATGTGCCAGCGAGGAGGCTGAGCCCCGAAGGGGGGTGGGTTGTGAGATCCCACATCGATTGGGGAGGAGAAGGAATAATTATTTGTAAGGGTGTGGAAACCTTTCCCTAGTAGATGTGTTTTAAAAACCTTGAGGGGAAGCCCGAAAGGGAAAGCTCAAAGAGGATAATATTTACTAGCGGTGGGCTTGGGTTGTTACAAAGCGAGTCATCGATTTTGACATTGCAATTCATTTTTAGTAATATTTTGGCAATGAATCTAACTTCTTCTGTTATTAATGACTCATGGTTCCATTTGATGGCTATATTTTCTCATAGCATATTTTAAGGTTGGATCCATTTTGTATGCAGCTCTTTGATCTATTTGATGTTCAGCAGCAAGGGTTTATTGATTTTGGTGACTTTGTAAGATCATTGAGTGTCTTTCATCCTAATGCTCCCGAGGAAGACAAGATTGAATGTAAGTATGCAGGATATGGCATAATATATACCTCACATGTATCATTCTATCTTGTGGCTTGACTGATGCTAGTTATTTATTTACCTTACAGTTTCGTTTAAGCTTTACGATTTGGATAACACGGGATTCATTGAGCGGCAAGAGGTAGGTTCTCTATGCCTCTGGTTGAATACGATCCATACGATGCATGGATTATTAGATACGTTCAAGGATGAGAAAAAGTTTTAAATTTATCTTTATTTTGATTCTGTCGAAACCCTGCCCAAACATTTACATGCTACACGGTAGTGGATGATATGGCACGCCATCGAAATCGGTAGATAAGCAACCGGGATGCTATGAATGGAAGATCTGTGCCTGTTTTTGTGAAAGATTTACATGGTTAACTCCACCAGAGCTTTTTGTTTGTTAACTTTGGCAGGTGAAGCAGATGCTAATTGCCCTTCTTTCTGAATCTGAGATGAAGCTGGCTGATGAGACAATAGAGATAATCCTTGATAAGGTCAGGTACCATAAAATTTCAGGATCATTAGTTGTTTGAGTTTCCTGTAGTTTTCAGCAAATCATACTCTTCTATCAGTTATTGTTAAAACTATTTTATTACCAAATAGTATGACCACGAGTATTGGTATTTTTTATGAGATCCCACGTCGGTTGTTGAGGAGAACAAAGCATTCTTTACAAGGGTGTGGAAACCTCTCCCTAGCCATTTTAAAACCTTAAGTGGAAGCCTGAAAGGGAAAACCCAGAGAGGACAATATCTACTAGCGTTGGGTTTGGACTGTTACAAATGGTATCAGAGCCAGGCACTGGGCAATGTACCAATGAGGATGGCGAGCCCTAAAGGGGGTGCACACGAGATGGTGTGCCAGCAAAGACGCTGAGCCCTGAAGGAGGGTGGATTATGAGATCTCACATCAGTTGAAGAGGGAAACGAAGCATTCTTTATAAGGGTATGGAAATCTGTCTCTAGCAGATGTATTTTAAAACCTTGAGGGGAAGGCCGAAGGGAAAAATCCATAAAGGAAAATATCTGCTAATGGTGGGCTTGGACTGTTACATTTTTTCTTCAGAATACGTAGCTACAATTTACAAAAATAAGCAAACTAGAAAGGACCCAATATCCGAATCATCATTTAGAAAGAAAGAAAGAAAGAAAGAAATATTCGGTTTGGCCCATGTCGAAGTGTTCCATCCAAGAACTCGATACTAAATTTCGTACCGTGTCGCTGTCAGCTTTTTATCTGATGGAATATTTTGTACAGACATTCATGGAGGCTGATGTGAAGGAAGATGGGAAGATAGACAAGAGTGAATGGCAAAATTTTGTGTGCAAGAATCCATCATTATTGAAAGTGATGACGCTTCCATACTTGAGGTAAAGAAGAAAAAGCATAATATATGTTTGGTTAGGCTTTCAAATTGTTGATCCTTTTGTTGTTTGTGGGGGACAGGGACATAACAACCACCTTCCCAAGTTTTGTGTTTAATTCTGAGGTGGATGAGATTGCCTCATAACAGAGGAAGCTAAGAAGCTGTTGTTGTCGTCGTCGTTGAATACAACGTCGTCGTTGTTTTCTTTGAATGGTAGAAAACAGAACTGAGTTTACTGATTCAACCCAATTATGAGACATTTTCCCTTTCCTTCCCCACACATAATAAATAAGTTCTAGTGTAATTTCAGCAATGTTTGTTGCTCTCTTACACTCTCTTGAATTCTGTAAATCTTTCTTTTAGGAAAATATATCAAGTGTTATAAGTCTTTAATTGG ATGGGCTGCATTTTTTCTAAAGAAAACAGACAATTTCCAGGATATGAAGATCCTATAAATCTTGCTTCACAAACAGCTTTTAGTGTCAGTGAAGTTGAAGCATTGTTTGAGCTGTACAAGAGCATCAGCAGTTCTATCATAGATGATGGTTTAATAAACAGGGAAGAATTTCAGCTGGCCATTTTTAATAACAGAAAGAAGGAAAATCTGTTAGCAAATCGGCTCTTTGATCTATTTGATGTTCAGCAGCAAGGGTTTATTGATTTTGGTGACTTTGTAAGATCATTGAGTGTCTTTCATCCTAATGCTCCCGAGGAAGACAAGATTGAATTTTCGTTTAAGCTTTACGATTTGGATAACACGGGATTCATTGAGCGGCAAGAGGTGAAGCAGATGCTAATTGCCCTTCTTTCTGAATCTGAGATGAAGCTGGCTGATGAGACAATAGAGATAATCCTTGATAAGACATTCATGGAGGCTGATGTGAAGGAAGATGGGAAGATAGACAAGAGTGAATGGCAAAATTTTGTGTGCAAGAATCCATCATTATTGAAAGTGATGACGCTTCCATACTTGAGGGACATAACAACCACCTTCCCAAGTTTTGTGTTTAATTCTGAGGTGGATGAGATTGCCTCATAACAGAGGAAGCTAAGAAGCTGTTGTTGTCGTCGTCGTTGAATACAACGTCGTCGTTGTTTTCTTTGAATGGTAGAAAACAGAACTGAGTTTACTGATTCAACCCAATTATGAGACATTTTCCCTTTCCTTCCCCACACATAATAAATAAGTTCTAGTGTAATTTCAGCAATGTTTGTTGCTCTCTTACACTCTCTTGAATTCTGTAAATCTTTCTTTTAGGAAAATATATCAAGTGTTATAAGTCTTTAATTGG ATGGGCTGCATTTTTTCTAAAGAAAACAGACAATTTCCAGGATATGAAGATCCTATAAATCTTGCTTCACAAACAGCTTTTAGTGTCAGTGAAGTTGAAGCATTGTTTGAGCTGTACAAGAGCATCAGCAGTTCTATCATAGATGATGGTTTAATAAACAGGGAAGAATTTCAGCTGGCCATTTTTAATAACAGAAAGAAGGAAAATCTGTTAGCAAATCGGCTCTTTGATCTATTTGATGTTCAGCAGCAAGGGTTTATTGATTTTGGTGACTTTGTAAGATCATTGAGTGTCTTTCATCCTAATGCTCCCGAGGAAGACAAGATTGAATTTTCGTTTAAGCTTTACGATTTGGATAACACGGGATTCATTGAGCGGCAAGAGGTGAAGCAGATGCTAATTGCCCTTCTTTCTGAATCTGAGATGAAGCTGGCTGATGAGACAATAGAGATAATCCTTGATAAGACATTCATGGAGGCTGATGTGAAGGAAGATGGGAAGATAGACAAGAGTGAATGGCAAAATTTTGTGTGCAAGAATCCATCATTATTGAAAGTGATGACGCTTCCATACTTGAGGGACATAACAACCACCTTCCCAAGTTTTGTGTTTAATTCTGAGGTGGATGAGATTGCCTCATAA MGCIFSKENRQFPGYEDPINLASQTAFSVSEVEALFELYKSISSSIIDDGLINREEFQLAIFNNRKKENLLANRLFDLFDVQQQGFIDFGDFVRSLSVFHPNAPEEDKIEFSFKLYDLDNTGFIERQEVKQMLIALLSESEMKLADETIEIILDKTFMEADVKEDGKIDKSEWQNFVCKNPSLLKVMTLPYLRDITTTFPSFVFNSEVDEIAS Homology
BLAST of Carg12056 vs. NCBI nr
Match: KAG6596898.1 (Calcineurin B-like protein 1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7030173.1 Calcineurin B-like protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 419.5 bits (1077), Expect = 1.8e-113 Identity = 213/213 (100.00%), Postives = 213/213 (100.00%), Query Frame = 0
BLAST of Carg12056 vs. NCBI nr
Match: XP_022935593.1 (calcineurin B-like protein 1 [Cucurbita moschata] >XP_022935601.1 calcineurin B-like protein 1 [Cucurbita moschata] >XP_022935611.1 calcineurin B-like protein 1 [Cucurbita moschata]) HSP 1 Score: 418.3 bits (1074), Expect = 3.9e-113 Identity = 212/213 (99.53%), Postives = 213/213 (100.00%), Query Frame = 0
BLAST of Carg12056 vs. NCBI nr
Match: XP_023539775.1 (calcineurin B-like protein 1 [Cucurbita pepo subsp. pepo] >XP_023539776.1 calcineurin B-like protein 1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 415.2 bits (1066), Expect = 3.3e-112 Identity = 210/213 (98.59%), Postives = 213/213 (100.00%), Query Frame = 0
BLAST of Carg12056 vs. NCBI nr
Match: XP_023005541.1 (calcineurin B-like protein 1 isoform X1 [Cucurbita maxima] >XP_023005542.1 calcineurin B-like protein 1 isoform X1 [Cucurbita maxima] >XP_023005543.1 calcineurin B-like protein 1 isoform X1 [Cucurbita maxima]) HSP 1 Score: 414.8 bits (1065), Expect = 4.4e-112 Identity = 211/213 (99.06%), Postives = 212/213 (99.53%), Query Frame = 0
BLAST of Carg12056 vs. NCBI nr
Match: XP_022155549.1 (calcineurin B-like protein 1 [Momordica charantia] >XP_022155550.1 calcineurin B-like protein 1 [Momordica charantia] >XP_022155551.1 calcineurin B-like protein 1 [Momordica charantia]) HSP 1 Score: 382.5 bits (981), Expect = 2.4e-102 Identity = 194/213 (91.08%), Postives = 203/213 (95.31%), Query Frame = 0
BLAST of Carg12056 vs. ExPASy Swiss-Prot
Match: O81445 (Calcineurin B-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=CBL1 PE=1 SV=3) HSP 1 Score: 338.2 bits (866), Expect = 6.8e-92 Identity = 165/213 (77.46%), Postives = 195/213 (91.55%), Query Frame = 0
BLAST of Carg12056 vs. ExPASy Swiss-Prot
Match: Q9LTB8 (Calcineurin B-like protein 9 OS=Arabidopsis thaliana OX=3702 GN=CBL9 PE=1 SV=3) HSP 1 Score: 337.8 bits (865), Expect = 8.9e-92 Identity = 165/213 (77.46%), Postives = 193/213 (90.61%), Query Frame = 0
BLAST of Carg12056 vs. ExPASy Swiss-Prot
Match: Q7XC27 (Calcineurin B-like protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=CBL1 PE=2 SV=2) HSP 1 Score: 334.3 bits (856), Expect = 9.8e-91 Identity = 159/213 (74.65%), Postives = 191/213 (89.67%), Query Frame = 0
BLAST of Carg12056 vs. ExPASy Swiss-Prot
Match: Q75LU8 (Calcineurin B-like protein 3 OS=Oryza sativa subsp. japonica OX=39947 GN=CBL3 PE=1 SV=1) HSP 1 Score: 270.8 bits (691), Expect = 1.3e-71 Identity = 134/201 (66.67%), Postives = 165/201 (82.09%), Query Frame = 0
BLAST of Carg12056 vs. ExPASy Swiss-Prot
Match: Q3HRP1 (Calcineurin B-like protein 6 OS=Oryza sativa subsp. japonica OX=39947 GN=CBL6 PE=2 SV=1) HSP 1 Score: 270.0 bits (689), Expect = 2.3e-71 Identity = 130/208 (62.50%), Postives = 167/208 (80.29%), Query Frame = 0
BLAST of Carg12056 vs. ExPASy TrEMBL
Match: A0A6J1F570 (calcineurin B-like protein 1 OS=Cucurbita moschata OX=3662 GN=LOC111442417 PE=4 SV=1) HSP 1 Score: 418.3 bits (1074), Expect = 1.9e-113 Identity = 212/213 (99.53%), Postives = 213/213 (100.00%), Query Frame = 0
BLAST of Carg12056 vs. ExPASy TrEMBL
Match: A0A6J1KTF0 (calcineurin B-like protein 1 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111498500 PE=4 SV=1) HSP 1 Score: 414.8 bits (1065), Expect = 2.1e-112 Identity = 211/213 (99.06%), Postives = 212/213 (99.53%), Query Frame = 0
BLAST of Carg12056 vs. ExPASy TrEMBL
Match: A0A6J1DRZ5 (calcineurin B-like protein 1 OS=Momordica charantia OX=3673 GN=LOC111022663 PE=4 SV=1) HSP 1 Score: 382.5 bits (981), Expect = 1.2e-102 Identity = 194/213 (91.08%), Postives = 203/213 (95.31%), Query Frame = 0
BLAST of Carg12056 vs. ExPASy TrEMBL
Match: A0A1S3BJV7 (calcineurin B-like protein 1 OS=Cucumis melo OX=3656 GN=LOC103490833 PE=4 SV=1) HSP 1 Score: 380.9 bits (977), Expect = 3.4e-102 Identity = 193/213 (90.61%), Postives = 203/213 (95.31%), Query Frame = 0
BLAST of Carg12056 vs. ExPASy TrEMBL
Match: A0A6J1EBV1 (calcineurin B-like protein 1 OS=Cucurbita moschata OX=3662 GN=LOC111431147 PE=4 SV=1) HSP 1 Score: 380.9 bits (977), Expect = 3.4e-102 Identity = 193/213 (90.61%), Postives = 203/213 (95.31%), Query Frame = 0
BLAST of Carg12056 vs. TAIR 10
Match: AT4G17615.1 (calcineurin B-like protein 1 ) HSP 1 Score: 338.2 bits (866), Expect = 4.8e-93 Identity = 165/213 (77.46%), Postives = 195/213 (91.55%), Query Frame = 0
BLAST of Carg12056 vs. TAIR 10
Match: AT5G47100.1 (calcineurin B-like protein 9 ) HSP 1 Score: 337.8 bits (865), Expect = 6.3e-93 Identity = 165/213 (77.46%), Postives = 193/213 (90.61%), Query Frame = 0
BLAST of Carg12056 vs. TAIR 10
Match: AT5G24270.1 (Calcium-binding EF-hand family protein ) HSP 1 Score: 267.3 bits (682), Expect = 1.0e-71 Identity = 130/215 (60.47%), Postives = 174/215 (80.93%), Query Frame = 0
BLAST of Carg12056 vs. TAIR 10
Match: AT5G24270.2 (Calcium-binding EF-hand family protein ) HSP 1 Score: 267.3 bits (682), Expect = 1.0e-71 Identity = 130/215 (60.47%), Postives = 174/215 (80.93%), Query Frame = 0
BLAST of Carg12056 vs. TAIR 10
Match: AT4G26570.1 (calcineurin B-like 3 ) HSP 1 Score: 265.4 bits (677), Expect = 4.0e-71 Identity = 131/201 (65.17%), Postives = 163/201 (81.09%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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