Carg12035 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg12035
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Ubiquitin carboxyl-terminal hydrolase
Location	Carg_Chr05: 9305226 .. 9310012 (-)
RNA-Seq Expression	Carg12035
Synteny	Carg12035

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTGTTGGATTGATTTCGATCTGAAGCCCTAAACGAGCATTGAAGAAGCTTTTAGCATTCCATTTCTGTAATTGTTGTGTACTAGAAGCTCCGAAGGCGACAATGGCTACCATAGACGAAAGCCCTTCGGCTAAGCGATGGCTTCCTCTTGAAGCTAACCCTGATGTTATGAACCAGGTATGATCGTTTTGTTCTAACTTCACTTCTAGATTAGGGCTCTGATTAGTGGAAAGAGAATACGGAGGGTCAGAATTGAGGAAGAATGTGGTTTTCTATCTTGATTGTGAAGTTTTCTTCGGATGGGATATAGTTCCTTGCTGTGTCTGTACGTTTTCTTGTTGTATATCTGTATGGTTTTTGTGTCTGTTTGTTCATTTATTTTTCTTAGTTGTAGAACTACGTAAAAGCTTACTGACCGATTTTTTTTTTTTTAAATGAGTTTACTGTTTTCTTTCTGGAGGTAGCGAATTTCTGCTCTGTGTGAGGGAGGAGCATTTTGTTGAAGTATGAAAAAAATTCGGAAGAAAATGTGGAGAAAGTCTTTTTGTCAATTTGATTCGTTATTTTGGATATGAGTTTATGATTTCTGACTAATCGGAACTTCTTCGTTCAGTTCAAAAAGCTTATTTGACTAACCGGGATTATGTGCTTGATTCAATAGGTCTCAGGGATGTTTTTTTAATGCATACTACATACCCTGTTAGCCAATTAAATATTTTAGCTTAGGTCACTTTCGTACTTCATATCCGTAAGGATGGTGTGCCCATGTTATTTGCTTGATAGCAACCTTTGAAGTGATCATTTTCTTTTCCTTTCCTTCAAATCTTCTTTTGCTGCCCTCTCATCAGAAATAATAATAATAAGGTTAAAGTATGAGTTTAATCATTGAACTTCTAGATTTGTGTCGAGTAGGTCTGAACTTAATTTGATCCCTAGAGTTTCAATTTTGCATTTGAATGTTTATTCGAGTTGCAAAAACTTCCATTTTACATCTAATTTTTTACAAACTTCTGTTTTGTAATTGCATAGTTTCTTTGGGGTCTTGGTCTTCCCGAAGATGAAGCAGAGTGCAACGATGTTTATGGCTTGGATGAAGCACTCTTGAGCATGGTGCCTAAGCCTGTACTGGCGGTTCTGTTCCTTTATCCCATAACCCAAAAGGTTTGCATGCAAAAGTTTAGTTTTAATGACGTTTATGGCTTGGAAGAATTCCATTGGCATGTAACTAAGAAGATGATCTCTCCATTGGATAAATGTTTTAATATTTTCAGAGTGAAGAAGAGAGACTGCAACAGGACAAAGATGCAAAGAAGGTAAGTACGAGTGCAGTGACAAGTTTGCAAGTGTATTCAAAATTACCACTATGCTGGACCTTTTAGACTACTTTTTCACCTCTATCTCAGTACATTAGGATGTTTCTGGTGTTTGTTTGTGTTTTGAAGGTTTTCTGTCTATCATAATATGTTTTACATTTTCCATCAGAAACAGAAAAATTCTAGAAACAGAATGCTTTTAAGAGTGGGTGATAGATGCTAGAAACAGAAAAATGTTTCTCACAATTCATATTCACATAAATTATGGTAGTCTGACTGGTTGCAGATTTTAGCGGAGAGTCTATTCTTGGTGCATGTTATAGTTTTCTTAGGCTTAATATAAAAAAACTCTTGAGCTTTGCCGTTTGTTTAAAAATACTCCTATTTTTTCAATTATAACATTATTCTTGACCCTTGAAGTAGAATATTATTCATTAGATTGTTGGACAAAAAGTCTACACAGCAGAACACAATTCTTTTCAACTTAATCTCAAGCGTCACAGTTATTGCATGTCGACTTTTCATTCAACATTCTAGTAGATTTGTACTTCAAGAGTAGTTTTGAAACATTTATGAAATGACAAGGGTAATTTTGCCACTTTTTTAAAAAATAAGTTCAGGGGTATTTTTGTAGTTTAGTCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATGTTAAAAGGTTTCTCATCTGTAATCCTTATTTAACAAGGTTATTTCCTTTCTGTCGCGACTCTAGGATCATAGTGATCGAGTATACTTTATGAAACAAACGGTTGGCAATGCCTGTGGAACTATTGGACTTCTTCATGCCATAGGGAACGTTACTTCAGAGATCAAGCTTTGTAAGTACTGTGATACTATCCAGTTTAATGTGGTGAAATATATTTCTTAATTGTAGTGAATATTAACACAGTTACCCAGATCAGATTGGGTAACATTATTATCCTCTCCCTTTTTCTCAGAGGCCTTTATCTTGTTCTTTTGTCGTATGTGCACTTGTAGAGTAAAGCATTGTTGACTAAGATGAGAAGAAAGCTATTTATATTCGAAGTTAAGCAGAGCACAAATTAAATATGAAAGTGGAACTAAGAGTTATTTGTCCTGCTCATTCATATGTCTGATTTGGTTACCTTGTCCAGGTTTACCACAGTGGTTTAAGTATCCAACTTCAGTCCTGTGACTGGCCATTCTCATTTTTCTATAATTTGGTTGAAGTTTTATTAGTGTCTCTACTCACCTGCTTGTTCCGGGATTCCACAGTGATTAATTCGACTTTGCTATCATATTATTTTAGTTCTCTTACATTTTTTTTTTCAACTCCTGTGCTGTCTTTACGTTTCAAGCCGAGGGATCATTCTTGGATAGGTTCTACAAGTCTACCAGAAGCATGGGTCCAATGGAGGTTCGTTCTTTTTACTATATCTGCTTCCTCTTCTCACTCCCCTCCTCCCTTCCCACCCATCACCAAAAAAAATTCAATAGAGCAAAGGGCAGATATACCTTGAAAGTGGAGGAAGAAAATATAATAATTCTCTGCCCTTTACCCAAGAATACTTTTCCGGTTTTTGCATCTAATAGTCCTATGCTGTTCACTTTGGTAGCGTGCAGTATTTCTCGAGAAAGACAGAGAAATGGAAGATGCACATTCAGTAGCAGCTACTGCTGGAGAAACGGCTGTAAGACTCTTTTAAAATTAACTGAATTATGGTGGAGAATAAGAAGTTTTCTTGTTTTCTTTGAGCATACTAAGAATAGATAGATATACCTTCTTGAGGCTGCCTACAGCATGCAGAAATGAAGCTTCGGCACTTGATTTTCCTTTTCCAGATAAAGCTTTGATAGCTATCCTCTGCATTAGGAATTTCAATTATCTACTTTCAGGGGTAAAAAGACCTGCTTTTTTTGTGACTACAGAAAGAAATGATGTTTCTGCATTTTATGGGTATTTACCTATCTACAAGGGGAGCTGAATTTCCTACAAACGTCATGATTACCTATTTACCTTTGCAACGAAACCTAGAATTTAACAATTAAAATTGTAGATGATCAGTGAAAATGGATACATTTTTCAATAGTCGAAGACCTAACAACATAGGGGTTGGTTGTATAATGGAGGAACTGAAGATTTGAAGCTTTGGACAAAGTTTAAAAAATGAGGTACTGAATATGGAGAGATTTCTTAAGAAATGTTGCATAATTTTTATAAAGCTAGTTTTATTTGCATGAAGGCGGGTATGAACTTTCAGCCCTTTTGCTGCATGTCTCTTAATTTACAGAATGAACATTGAAAACCAGAAAATCTGTCTAGGTTATTGGTTAAGGTGAGTGATGGGTCGTCTGTCAGATACCTGATAACAAGTCAATAAGGGAGCTGATAAACACTAAAATTAACTCATTAGACATTTCTAGTCTTTTTTATTTTTCAAGTAGTGTTTTTTTTTTTCTTTTCTTTTTTTTTTTTTCTCATCTTTTCTTCCATTTATTACTGGCAGCCTCCAGAAAACGTCAATACTCACTTTATCTGCTTCACATGTGTGGATGGTATGAACGTCTCTCTCTCTCTCTCTCTCTCTTTCTCTCTCCCCTCCCTCCCCTCCCTCCCCAAGGAAGAAAAAGTGCTTTCTGAATTTGGGTGATTAGATTTTTAAGAAATGATATAATCTACAATATCATAATTGTTGCTTTATGCAGGGAAACTTTATGAGCTCGACGGGAGAAAGTCAGGACCAATATCACATGGTGTATCATCCCCTAGCAGTCTATTAGAGGTAAATAATTGTTCTGAACAACCATCCAGGGTGTTTTAGCCATTAGAAGAATCAATTGTGAAAGTAAAAGTAATATATATATATATGTACACATATATGTGTGTTTGGTTGTTCTTTTTGAATCATTTTGTATGTTTGTCGACCTTCCATCTTGAATATGTTGGCCCAATTAACTGAATATTACATTTCTCTTCTCTGCATTTTGATGAAATGATTGATAAAATCACAGGATGCAGCTGAAGTCATAAAGGGCATGATCTCAAAAAATCCCGACTCCCTGAGCTTCAATGTCATTGCCGTTTCGAAGAAAGTTGGGGACACATCTTAAGGCGAACAGGTTCGATCTTATTTAGTCTTACATCAATGACCAACCCCTAGGCCTAGTTTTCGTCATTTCTATTAGGAATCATTTACAAGTAGCCACATGAATATGTATGTGAATCTGTTTTTGCCTGAGACAAACAAGGTGTTCACTACTTGCATTGAACTTTCTTTTGTGGTTTCAAAATTTGCTATATGACAATAGAAAAGTTGTGTTCATTGCTTACAAACATGCATATGGTCGTATTGATTGTATAAGTGACAAATTGAATCATAAAAAGGTGAAAATGGGAATACAAATCCTGCCAAAACAGACGTAGATGACTGTTTAAGATATGTTAACAGCATAACTATGTTTAAAAATCATGTTTGAAAAATC

mRNA sequence

CTGTTGGATTGATTTCGATCTGAAGCCCTAAACGAGCATTGAAGAAGCTTTTAGCATTCCATTTCTGTAATTGTTGTGTACTAGAAGCTCCGAAGGCGACAATGGCTACCATAGACGAAAGCCCTTCGGCTAAGCGATGGCTTCCTCTTGAAGCTAACCCTGATGTTATGAACCAGTTTCTTTGGGGTCTTGGTCTTCCCGAAGATGAAGCAGAGTGCAACGATGTTTATGGCTTGGATGAAGCACTCTTGAGCATGGTGCCTAAGCCTGTACTGGCGGTTCTGTTCCTTTATCCCATAACCCAAAAGAGTGAAGAAGAGAGACTGCAACAGGACAAAGATGCAAAGAAGGATCATAGTGATCGAGTATACTTTATGAAACAAACGGTTGGCAATGCCTGTGGAACTATTGGACTTCTTCATGCCATAGGGAACGTTACTTCAGAGATCAAGCTTTCCGAGGGATCATTCTTGGATAGGTTCTACAAGTCTACCAGAAGCATGGGTCCAATGGAGCGTGCAGTATTTCTCGAGAAAGACAGAGAAATGGAAGATGCACATTCAGTAGCAGCTACTGCTGGAGAAACGGCTCCTCCAGAAAACGTCAATACTCACTTTATCTGCTTCACATGTGTGGATGGGAAACTTTATGAGCTCGACGGGAGAAAGTCAGGACCAATATCACATGGTGTATCATCCCCTAGCAGTCTATTAGAGGATGCAGCTGAAGTCATAAAGGGCATGATCTCAAAAAATCCCGACTCCCTGAGCTTCAATGTCATTGCCGTTTCGAAGAAAGTTGGGGACACATCTTAAGGCGAACAGGTTCGATCTTATTTAGTCTTACATCAATGACCAACCCCTAGGCCTAGTTTTCGTCATTTCTATTAGGAATCATTTACAAGTAGCCACATGAATATGTATGTGAATCTGTTTTTGCCTGAGACAAACAAGGTGTTCACTACTTGCATTGAACTTTCTTTTGTGGTTTCAAAATTTGCTATATGACAATAGAAAAGTTGTGTTCATTGCTTACAAACATGCATATGGTCGTATTGATTGTATAAGTGACAAATTGAATCATAAAAAGGTGAAAATGGGAATACAAATCCTGCCAAAACAGACGTAGATGACTGTTTAAGATATGTTAACAGCATAACTATGTTTAAAAATCATGTTTGAAAAATC

Coding sequence (CDS)

ATGGCTACCATAGACGAAAGCCCTTCGGCTAAGCGATGGCTTCCTCTTGAAGCTAACCCTGATGTTATGAACCAGTTTCTTTGGGGTCTTGGTCTTCCCGAAGATGAAGCAGAGTGCAACGATGTTTATGGCTTGGATGAAGCACTCTTGAGCATGGTGCCTAAGCCTGTACTGGCGGTTCTGTTCCTTTATCCCATAACCCAAAAGAGTGAAGAAGAGAGACTGCAACAGGACAAAGATGCAAAGAAGGATCATAGTGATCGAGTATACTTTATGAAACAAACGGTTGGCAATGCCTGTGGAACTATTGGACTTCTTCATGCCATAGGGAACGTTACTTCAGAGATCAAGCTTTCCGAGGGATCATTCTTGGATAGGTTCTACAAGTCTACCAGAAGCATGGGTCCAATGGAGCGTGCAGTATTTCTCGAGAAAGACAGAGAAATGGAAGATGCACATTCAGTAGCAGCTACTGCTGGAGAAACGGCTCCTCCAGAAAACGTCAATACTCACTTTATCTGCTTCACATGTGTGGATGGGAAACTTTATGAGCTCGACGGGAGAAAGTCAGGACCAATATCACATGGTGTATCATCCCCTAGCAGTCTATTAGAGGATGCAGCTGAAGTCATAAAGGGCATGATCTCAAAAAATCCCGACTCCCTGAGCTTCAATGTCATTGCCGTTTCGAAGAAAGTTGGGGACACATCTTAA

Protein sequence

MATIDESPSAKRWLPLEANPDVMNQFLWGLGLPEDEAECNDVYGLDEALLSMVPKPVLAVLFLYPITQKSEEERLQQDKDAKKDHSDRVYFMKQTVGNACGTIGLLHAIGNVTSEIKLSEGSFLDRFYKSTRSMGPMERAVFLEKDREMEDAHSVAATAGETAPPENVNTHFICFTCVDGKLYELDGRKSGPISHGVSSPSSLLEDAAEVIKGMISKNPDSLSFNVIAVSKKVGDTS

Homology

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BLAST of Carg12035 vs. NCBI nr
Match: KAG7030152.1 (Ubiquitin carboxyl-terminal hydrolase 3 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 477.6 bits (1228), Expect = 6.1e-131
Identity = 237/237 (100.00%), Postives = 237/237 (100.00%), Query Frame = 0


Query: 1   MATIDESPSAKRWLPLEANPDVMNQFLWGLGLPEDEAECNDVYGLDEALLSMVPKPVLAV 60
           MATIDESPSAKRWLPLEANPDVMNQFLWGLGLPEDEAECNDVYGLDEALLSMVPKPVLAV
Sbjct: 1   MATIDESPSAKRWLPLEANPDVMNQFLWGLGLPEDEAECNDVYGLDEALLSMVPKPVLAV 60

Query: 61  LFLYPITQKSEEERLQQDKDAKKDHSDRVYFMKQTVGNACGTIGLLHAIGNVTSEIKLSE 120
           LFLYPITQKSEEERLQQDKDAKKDHSDRVYFMKQTVGNACGTIGLLHAIGNVTSEIKLSE
Sbjct: 61  LFLYPITQKSEEERLQQDKDAKKDHSDRVYFMKQTVGNACGTIGLLHAIGNVTSEIKLSE 120

Query: 121 GSFLDRFYKSTRSMGPMERAVFLEKDREMEDAHSVAATAGETAPPENVNTHFICFTCVDG 180
           GSFLDRFYKSTRSMGPMERAVFLEKDREMEDAHSVAATAGETAPPENVNTHFICFTCVDG
Sbjct: 121 GSFLDRFYKSTRSMGPMERAVFLEKDREMEDAHSVAATAGETAPPENVNTHFICFTCVDG 180

Query: 181 KLYELDGRKSGPISHGVSSPSSLLEDAAEVIKGMISKNPDSLSFNVIAVSKKVGDTS 238
           KLYELDGRKSGPISHGVSSPSSLLEDAAEVIKGMISKNPDSLSFNVIAVSKKVGDTS
Sbjct: 181 KLYELDGRKSGPISHGVSSPSSLLEDAAEVIKGMISKNPDSLSFNVIAVSKKVGDTS 237

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BLAST of Carg12035 vs. NCBI nr
Match: XP_022951470.1 (ubiquitin carboxyl-terminal hydrolase 3-like [Cucurbita moschata])

HSP 1 Score: 473.0 bits (1216), Expect = 1.5e-129
Identity = 235/237 (99.16%), Postives = 236/237 (99.58%), Query Frame = 0


Query: 1   MATIDESPSAKRWLPLEANPDVMNQFLWGLGLPEDEAECNDVYGLDEALLSMVPKPVLAV 60
           MATIDESPSAKRWLPLEANPDVMNQFLWGLGLPEDEAECNDVYGLDEALLSMVPKPVLAV
Sbjct: 1   MATIDESPSAKRWLPLEANPDVMNQFLWGLGLPEDEAECNDVYGLDEALLSMVPKPVLAV 60

Query: 61  LFLYPITQKSEEERLQQDKDAKKDHSDRVYFMKQTVGNACGTIGLLHAIGNVTSEIKLSE 120
           LFLYPITQKSEEERLQQDKDAKKDHSDRVYFMKQTVGNACGTIGLLHAIGNVTSEIKLSE
Sbjct: 61  LFLYPITQKSEEERLQQDKDAKKDHSDRVYFMKQTVGNACGTIGLLHAIGNVTSEIKLSE 120

Query: 121 GSFLDRFYKSTRSMGPMERAVFLEKDREMEDAHSVAATAGETAPPENVNTHFICFTCVDG 180
           GSFLDRFYKSTRSM PMERAVFLEKDREMEDAHSVAATAGETAPPENVNTHFICFTCV+G
Sbjct: 121 GSFLDRFYKSTRSMDPMERAVFLEKDREMEDAHSVAATAGETAPPENVNTHFICFTCVNG 180

Query: 181 KLYELDGRKSGPISHGVSSPSSLLEDAAEVIKGMISKNPDSLSFNVIAVSKKVGDTS 238
           KLYELDGRKSGPISHGVSSPSSLLEDAAEVIKGMISKNPDSLSFNVIAVSKKVGDTS
Sbjct: 181 KLYELDGRKSGPISHGVSSPSSLLEDAAEVIKGMISKNPDSLSFNVIAVSKKVGDTS 237

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BLAST of Carg12035 vs. NCBI nr
Match: XP_023540841.1 (ubiquitin carboxyl-terminal hydrolase 3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 471.5 bits (1212), Expect = 4.4e-129
Identity = 235/237 (99.16%), Postives = 235/237 (99.16%), Query Frame = 0


Query: 1   MATIDESPSAKRWLPLEANPDVMNQFLWGLGLPEDEAECNDVYGLDEALLSMVPKPVLAV 60
           MATIDESPSAKRWLPLEANPDVMNQFLWGLGLPEDEAECNDVYGLDEALLSMVPKPVLAV
Sbjct: 1   MATIDESPSAKRWLPLEANPDVMNQFLWGLGLPEDEAECNDVYGLDEALLSMVPKPVLAV 60

Query: 61  LFLYPITQKSEEERLQQDKDAKKDHSDRVYFMKQTVGNACGTIGLLHAIGNVTSEIKLSE 120
           LFLYPITQKSEEERLQQDKDAKKDHSDRVYFMKQTVGNACGTIGLLHAIGNVTSEIKLSE
Sbjct: 61  LFLYPITQKSEEERLQQDKDAKKDHSDRVYFMKQTVGNACGTIGLLHAIGNVTSEIKLSE 120

Query: 121 GSFLDRFYKSTRSMGPMERAVFLEKDREMEDAHSVAATAGETAPPENVNTHFICFTCVDG 180
           GSFLDRFYKSTRSM PMERAVFLEKDREME AHSVAATAGETAPPENVNTHFICFTCVDG
Sbjct: 121 GSFLDRFYKSTRSMDPMERAVFLEKDREMEVAHSVAATAGETAPPENVNTHFICFTCVDG 180

Query: 181 KLYELDGRKSGPISHGVSSPSSLLEDAAEVIKGMISKNPDSLSFNVIAVSKKVGDTS 238
           KLYELDGRKSGPISHGVSSPSSLLEDAAEVIKGMISKNPDSLSFNVIAVSKKVGDTS
Sbjct: 181 KLYELDGRKSGPISHGVSSPSSLLEDAAEVIKGMISKNPDSLSFNVIAVSKKVGDTS 237

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BLAST of Carg12035 vs. NCBI nr
Match: XP_023005521.1 (ubiquitin carboxyl-terminal hydrolase 3-like [Cucurbita maxima])

HSP 1 Score: 457.2 bits (1175), Expect = 8.5e-125
Identity = 228/237 (96.20%), Postives = 231/237 (97.47%), Query Frame = 0


Query: 1   MATIDESPSAKRWLPLEANPDVMNQFLWGLGLPEDEAECNDVYGLDEALLSMVPKPVLAV 60
           MATIDESPSAKRWLPLEANPDVMNQFLWGLGLPEDEAECNDVYGLDEALLSMVPKPVLAV
Sbjct: 1   MATIDESPSAKRWLPLEANPDVMNQFLWGLGLPEDEAECNDVYGLDEALLSMVPKPVLAV 60

Query: 61  LFLYPITQKSEEERLQQDKDAKKDHSDRVYFMKQTVGNACGTIGLLHAIGNVTSEIKLSE 120
           LFLYPITQKSEEERLQQDKDAKK HSDRVYFMKQTVGNACGTIGLLHAIGNV SEIKLSE
Sbjct: 61  LFLYPITQKSEEERLQQDKDAKKGHSDRVYFMKQTVGNACGTIGLLHAIGNVASEIKLSE 120

Query: 121 GSFLDRFYKSTRSMGPMERAVFLEKDREMEDAHSVAATAGETAPPENVNTHFICFTCVDG 180
           GSFLDRF+KSTRSM PMERAVFLEKDREME AHSVAATAGETAPPENVNTHFICFT VDG
Sbjct: 121 GSFLDRFFKSTRSMDPMERAVFLEKDREMEVAHSVAATAGETAPPENVNTHFICFTSVDG 180

Query: 181 KLYELDGRKSGPISHGVSSPSSLLEDAAEVIKGMISKNPDSLSFNVIAVSKKVGDTS 238
           KLYELDGRKSGPISHGVSSPSSLLEDAAEVIKGMISKNP+SLSFNVIA+SKKVGD S
Sbjct: 181 KLYELDGRKSGPISHGVSSPSSLLEDAAEVIKGMISKNPNSLSFNVIAISKKVGDAS 237

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BLAST of Carg12035 vs. NCBI nr
Match: XP_038903625.1 (ubiquitin carboxyl-terminal hydrolase 3-like [Benincasa hispida])

HSP 1 Score: 420.6 bits (1080), Expect = 8.8e-114
Identity = 205/237 (86.50%), Postives = 221/237 (93.25%), Query Frame = 0


Query: 1   MATIDESPSAKRWLPLEANPDVMNQFLWGLGLPEDEAECNDVYGLDEALLSMVPKPVLAV 60
           MA ++ES SAKRWLPLEANPDVMNQFLWGLGLPEDEAEC DVYGLD+ LL+MVPKPVLAV
Sbjct: 1   MAAVNESSSAKRWLPLEANPDVMNQFLWGLGLPEDEAECTDVYGLDDELLNMVPKPVLAV 60

Query: 61  LFLYPITQKSEEERLQQDKDAKKDHSDRVYFMKQTVGNACGTIGLLHAIGNVTSEIKLSE 120
           LFLYPITQKSEEERLQQ+KDAKKD+SD+VYFMKQTVGNACGTIGLLHAIGN+T EIKLSE
Sbjct: 61  LFLYPITQKSEEERLQQEKDAKKDYSDQVYFMKQTVGNACGTIGLLHAIGNITPEIKLSE 120

Query: 121 GSFLDRFYKSTRSMGPMERAVFLEKDREMEDAHSVAATAGETAPPENVNTHFICFTCVDG 180
           GSFLDRF+KSTR+M PMERA FLE+D EME AHSVAATAG TA PENV+THFICF+CVDG
Sbjct: 121 GSFLDRFFKSTRNMDPMERAAFLERDNEMEVAHSVAATAGNTAAPENVDTHFICFSCVDG 180

Query: 181 KLYELDGRKSGPISHGVSSPSSLLEDAAEVIKGMISKNPDSLSFNVIAVSKKVGDTS 238
           KLYELDGRKS PISHG SSPSSLL+DAA+VIKGMIS NPDSLSFNVIA+SKK GD S
Sbjct: 181 KLYELDGRKSEPISHGPSSPSSLLQDAAQVIKGMISNNPDSLSFNVIAISKKTGDAS 237

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BLAST of Carg12035 vs. ExPASy Swiss-Prot
Match: Q8GWE1 (Ubiquitin carboxyl-terminal hydrolase 3 OS=Arabidopsis thaliana OX=3702 GN=UCH3 PE=2 SV=1)

HSP 1 Score: 365.9 bits (938), Expect = 3.4e-100
Identity = 176/233 (75.54%), Postives = 205/233 (87.98%), Query Frame = 0


Query: 1   MATIDESPSAKRWLPLEANPDVMNQFLWGLGLPEDEAECNDVYGLDEALLSMVPKPVLAV 60
           MAT  ES S+KRWLPLE+NPDVMNQ+LWGLGL  DEAECNDVYGLD+ LL MVPKPVLAV
Sbjct: 1   MATASESSSSKRWLPLESNPDVMNQYLWGLGLAPDEAECNDVYGLDDELLEMVPKPVLAV 60

Query: 61  LFLYPITQKSEEERLQQDKDAK-KDHSDRVYFMKQTVGNACGTIGLLHAIGNVTSEIKLS 120
           LFLYPIT+KSEEER++QDK+ K K HSD+VYFMKQTVGNACGTIGLLHAIGN+TSEIKLS
Sbjct: 61  LFLYPITKKSEEERIEQDKEIKEKVHSDKVYFMKQTVGNACGTIGLLHAIGNITSEIKLS 120

Query: 121 EGSFLDRFYKSTRSMGPMERAVFLEKDREMEDAHSVAATAGETAPPENVNTHFICFTCVD 180
           +GSFLDRF+KST +M PMERA FLE D ++EDAHSVA  AG+T   E+ +THFIC  CV+
Sbjct: 121 DGSFLDRFFKSTANMTPMERAKFLENDSQIEDAHSVAVIAGDTPASEDADTHFICLACVE 180

Query: 181 GKLYELDGRKSGPISHGVSSPSSLLEDAAEVIKGMISKNPDSLSFNVIAVSKK 233
           G+LYELDGRK+GPISHG SSP++LL+DA +VIK MI KNP SL+FN+IA+SK+
Sbjct: 181 GELYELDGRKAGPISHGASSPATLLKDATKVIKKMIEKNPGSLNFNLIAISKR 233

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BLAST of Carg12035 vs. ExPASy Swiss-Prot
Match: Q2TBG8 (Ubiquitin carboxyl-terminal hydrolase isozyme L3 OS=Bos taurus OX=9913 GN=UCHL3 PE=2 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 1.4e-53
Identity = 115/226 (50.88%), Postives = 147/226 (65.04%), Query Frame = 0


Query: 11  KRWLPLEANPDVMNQFLWGLGLPEDEAECNDVYGLDEALLSMVPKPVLAVLFLYPITQKS 70
           +RWLPLEANP+V NQFL  LGL     +  DVYG+D  LLSMVP+PV AVL L+PIT+K 
Sbjct: 4   QRWLPLEANPEVTNQFLKQLGL-HPNWQFVDVYGMDPELLSMVPRPVCAVLLLFPITEKY 63

Query: 71  EEERLQQDKDAK---KDHSDRVYFMKQTVGNACGTIGLLHAIGNVTSEIKLSEGSFLDRF 130
           E  R ++++  K   +D +  VYFMKQT+ NACGTIGL+HAI N   ++    GS L +F
Sbjct: 64  EVFRTEEEEKIKSQGQDVTSSVYFMKQTISNACGTIGLIHAIANNKDKMHFESGSTLKKF 123

Query: 131 YKSTRSMGPMERAVFLEKDREMEDAHSVAATAGETAPP---ENVNTHFICFTCVDGKLYE 190
            + + SM P ERA +LE    +   H  +A  G+T  P   E V+ HFI    VDG LYE
Sbjct: 124 LEESASMSPEERARYLENYDAIRVTHETSAHEGQTEAPNIDEKVDLHFIALVHVDGHLYE 183

Query: 191 LDGRKSGPISHGVSSPSSLLEDAAEVIKGMISKNPDSLSFNVIAVS 231
           LDGRK  PI+HG +S  +LLEDA EV K  + ++PD L FN IA+S
Sbjct: 184 LDGRKPFPINHGETSDETLLEDAIEVCKKFMERDPDELRFNAIALS 228

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BLAST of Carg12035 vs. ExPASy Swiss-Prot
Match: P15374 (Ubiquitin carboxyl-terminal hydrolase isozyme L3 OS=Homo sapiens OX=9606 GN=UCHL3 PE=1 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 2.4e-53
Identity = 115/226 (50.88%), Postives = 147/226 (65.04%), Query Frame = 0


Query: 11  KRWLPLEANPDVMNQFLWGLGLPEDEAECNDVYGLDEALLSMVPKPVLAVLFLYPITQKS 70
           +RWLPLEANP+V NQFL  LGL     +  DVYG+D  LLSMVP+PV AVL L+PIT+K 
Sbjct: 4   QRWLPLEANPEVTNQFLKQLGL-HPNWQFVDVYGMDPELLSMVPRPVCAVLLLFPITEKY 63

Query: 71  EEERLQQDKDAK---KDHSDRVYFMKQTVGNACGTIGLLHAIGNVTSEIKLSEGSFLDRF 130
           E  R ++++  K   +D +  VYFMKQT+ NACGTIGL+HAI N   ++    GS L +F
Sbjct: 64  EVFRTEEEEKIKSQGQDVTSSVYFMKQTISNACGTIGLIHAIANNKDKMHFESGSTLKKF 123

Query: 131 YKSTRSMGPMERAVFLEKDREMEDAHSVAATAGETAPP---ENVNTHFICFTCVDGKLYE 190
            + + SM P ERA +LE    +   H  +A  G+T  P   E V+ HFI    VDG LYE
Sbjct: 124 LEESVSMSPEERARYLENYDAIRVTHETSAHEGQTEAPSIDEKVDLHFIALVHVDGHLYE 183

Query: 191 LDGRKSGPISHGVSSPSSLLEDAAEVIKGMISKNPDSLSFNVIAVS 231
           LDGRK  PI+HG +S  +LLEDA EV K  + ++PD L FN IA+S
Sbjct: 184 LDGRKPFPINHGETSDETLLEDAIEVCKKFMERDPDELRFNAIALS 228

[Close]

BLAST of Carg12035 vs. ExPASy Swiss-Prot
Match: Q9JKB1 (Ubiquitin carboxyl-terminal hydrolase isozyme L3 OS=Mus musculus OX=10090 GN=Uchl3 PE=1 SV=2)

HSP 1 Score: 210.3 bits (534), Expect = 2.4e-53
Identity = 115/226 (50.88%), Postives = 147/226 (65.04%), Query Frame = 0


Query: 11  KRWLPLEANPDVMNQFLWGLGLPEDEAECNDVYGLDEALLSMVPKPVLAVLFLYPITQKS 70
           +RWLPLEANP+V NQFL  LGL     +  DVYG++  LLSMVP+PV AVL L+PIT+K 
Sbjct: 4   QRWLPLEANPEVTNQFLKQLGL-HPNWQFVDVYGMEPELLSMVPRPVCAVLLLFPITEKY 63

Query: 71  EEERLQQDKDAK---KDHSDRVYFMKQTVGNACGTIGLLHAIGNVTSEIKLSEGSFLDRF 130
           E  R ++++  K   +D +  VYFMKQT+ NACGTIGL+HAI N   ++    GS L +F
Sbjct: 64  EVFRTEEEEKIKSQGQDVTSSVYFMKQTISNACGTIGLIHAIANNKDKMHFESGSTLKKF 123

Query: 131 YKSTRSMGPMERAVFLEKDREMEDAHSVAATAGETAPP---ENVNTHFICFTCVDGKLYE 190
            + + SM P ERA FLE    +   H  +A  G+T  P   E V+ HFI    VDG LYE
Sbjct: 124 LEESVSMSPEERAKFLENYDAIRVTHETSAHEGQTEAPSIDEKVDLHFIALVHVDGHLYE 183

Query: 191 LDGRKSGPISHGVSSPSSLLEDAAEVIKGMISKNPDSLSFNVIAVS 231
           LDGRK  PI+HG +S  +LLEDA EV K  + ++PD L FN IA+S
Sbjct: 184 LDGRKPFPINHGKTSDETLLEDAIEVCKKFMERDPDELRFNAIALS 228

[Close]

BLAST of Carg12035 vs. ExPASy Swiss-Prot
Match: Q06AB3 (Ubiquitin carboxyl-terminal hydrolase isozyme L3 OS=Sus scrofa OX=9823 GN=UCHL3 PE=2 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 2.4e-53
Identity = 115/226 (50.88%), Postives = 148/226 (65.49%), Query Frame = 0


Query: 11  KRWLPLEANPDVMNQFLWGLGLPEDEAECNDVYGLDEALLSMVPKPVLAVLFLYPITQKS 70
           +RWLPLEANP+V NQFL  LGL     +  DVYG+D  LLSMVP+PV AVL L+PIT+K 
Sbjct: 4   QRWLPLEANPEVTNQFLKQLGL-HPNWQFVDVYGMDPELLSMVPRPVCAVLLLFPITEKY 63

Query: 71  EEERLQQDKDAK---KDHSDRVYFMKQTVGNACGTIGLLHAIGNVTSEIKLSEGSFLDRF 130
           E  R ++++  K   +D +  VYFMKQT+ NACGTIGL+HAI N  +++    GS L +F
Sbjct: 64  EVFRTEEEEKIKSQGQDVTPSVYFMKQTISNACGTIGLIHAIANNKNKMHFESGSTLKKF 123

Query: 131 YKSTRSMGPMERAVFLEKDREMEDAHSVAATAGETAPP---ENVNTHFICFTCVDGKLYE 190
            + + SM P ERA +LE    +   H  +A  G+T  P   E V+ HFI    VDG LYE
Sbjct: 124 LEESASMSPDERARYLESYDAIPVTHETSAHEGQTEAPNIDEKVDLHFIALVHVDGHLYE 183

Query: 191 LDGRKSGPISHGVSSPSSLLEDAAEVIKGMISKNPDSLSFNVIAVS 231
           LDGRK  PI+HG +S  +LLEDA EV K  + ++PD L FN IA+S
Sbjct: 184 LDGRKPFPINHGETSDETLLEDAIEVCKKFMERDPDELRFNAIALS 228

[Close]

BLAST of Carg12035 vs. ExPASy TrEMBL
Match: A0A6J1GIV7 (Ubiquitin carboxyl-terminal hydrolase OS=Cucurbita moschata OX=3662 GN=LOC111454277 PE=3 SV=1)

HSP 1 Score: 473.0 bits (1216), Expect = 7.3e-130
Identity = 235/237 (99.16%), Postives = 236/237 (99.58%), Query Frame = 0


Query: 1   MATIDESPSAKRWLPLEANPDVMNQFLWGLGLPEDEAECNDVYGLDEALLSMVPKPVLAV 60
           MATIDESPSAKRWLPLEANPDVMNQFLWGLGLPEDEAECNDVYGLDEALLSMVPKPVLAV
Sbjct: 1   MATIDESPSAKRWLPLEANPDVMNQFLWGLGLPEDEAECNDVYGLDEALLSMVPKPVLAV 60

Query: 61  LFLYPITQKSEEERLQQDKDAKKDHSDRVYFMKQTVGNACGTIGLLHAIGNVTSEIKLSE 120
           LFLYPITQKSEEERLQQDKDAKKDHSDRVYFMKQTVGNACGTIGLLHAIGNVTSEIKLSE
Sbjct: 61  LFLYPITQKSEEERLQQDKDAKKDHSDRVYFMKQTVGNACGTIGLLHAIGNVTSEIKLSE 120

Query: 121 GSFLDRFYKSTRSMGPMERAVFLEKDREMEDAHSVAATAGETAPPENVNTHFICFTCVDG 180
           GSFLDRFYKSTRSM PMERAVFLEKDREMEDAHSVAATAGETAPPENVNTHFICFTCV+G
Sbjct: 121 GSFLDRFYKSTRSMDPMERAVFLEKDREMEDAHSVAATAGETAPPENVNTHFICFTCVNG 180

Query: 181 KLYELDGRKSGPISHGVSSPSSLLEDAAEVIKGMISKNPDSLSFNVIAVSKKVGDTS 238
           KLYELDGRKSGPISHGVSSPSSLLEDAAEVIKGMISKNPDSLSFNVIAVSKKVGDTS
Sbjct: 181 KLYELDGRKSGPISHGVSSPSSLLEDAAEVIKGMISKNPDSLSFNVIAVSKKVGDTS 237

[Close]

BLAST of Carg12035 vs. ExPASy TrEMBL
Match: A0A6J1KV75 (Ubiquitin carboxyl-terminal hydrolase OS=Cucurbita maxima OX=3661 GN=LOC111498484 PE=3 SV=1)

HSP 1 Score: 457.2 bits (1175), Expect = 4.1e-125
Identity = 228/237 (96.20%), Postives = 231/237 (97.47%), Query Frame = 0


Query: 1   MATIDESPSAKRWLPLEANPDVMNQFLWGLGLPEDEAECNDVYGLDEALLSMVPKPVLAV 60
           MATIDESPSAKRWLPLEANPDVMNQFLWGLGLPEDEAECNDVYGLDEALLSMVPKPVLAV
Sbjct: 1   MATIDESPSAKRWLPLEANPDVMNQFLWGLGLPEDEAECNDVYGLDEALLSMVPKPVLAV 60

Query: 61  LFLYPITQKSEEERLQQDKDAKKDHSDRVYFMKQTVGNACGTIGLLHAIGNVTSEIKLSE 120
           LFLYPITQKSEEERLQQDKDAKK HSDRVYFMKQTVGNACGTIGLLHAIGNV SEIKLSE
Sbjct: 61  LFLYPITQKSEEERLQQDKDAKKGHSDRVYFMKQTVGNACGTIGLLHAIGNVASEIKLSE 120

Query: 121 GSFLDRFYKSTRSMGPMERAVFLEKDREMEDAHSVAATAGETAPPENVNTHFICFTCVDG 180
           GSFLDRF+KSTRSM PMERAVFLEKDREME AHSVAATAGETAPPENVNTHFICFT VDG
Sbjct: 121 GSFLDRFFKSTRSMDPMERAVFLEKDREMEVAHSVAATAGETAPPENVNTHFICFTSVDG 180

Query: 181 KLYELDGRKSGPISHGVSSPSSLLEDAAEVIKGMISKNPDSLSFNVIAVSKKVGDTS 238
           KLYELDGRKSGPISHGVSSPSSLLEDAAEVIKGMISKNP+SLSFNVIA+SKKVGD S
Sbjct: 181 KLYELDGRKSGPISHGVSSPSSLLEDAAEVIKGMISKNPNSLSFNVIAISKKVGDAS 237

[Close]

BLAST of Carg12035 vs. ExPASy TrEMBL
Match: A0A6J1HQ82 (Ubiquitin carboxyl-terminal hydrolase OS=Cucurbita maxima OX=3661 GN=LOC111465100 PE=3 SV=1)

HSP 1 Score: 405.6 bits (1041), Expect = 1.4e-109
Identity = 196/237 (82.70%), Postives = 217/237 (91.56%), Query Frame = 0


Query: 1   MATIDESPSAKRWLPLEANPDVMNQFLWGLGLPEDEAECNDVYGLDEALLSMVPKPVLAV 60
           MA++D+SPSAKRWLPLEANPDVMNQFLWGLGLPEDEAECNDVYGLDE LL MVPKPVLAV
Sbjct: 1   MASVDQSPSAKRWLPLEANPDVMNQFLWGLGLPEDEAECNDVYGLDEELLDMVPKPVLAV 60

Query: 61  LFLYPITQKSEEERLQQDKDAKKDHSDRVYFMKQTVGNACGTIGLLHAIGNVTSEIKLSE 120
           +FLYPITQK ++ERLQQ++DAK D+SDRVYFMKQTVGNACGTIGLLHAIGN+TSEIKLSE
Sbjct: 61  VFLYPITQKCKDERLQQEEDAKNDYSDRVYFMKQTVGNACGTIGLLHAIGNITSEIKLSE 120

Query: 121 GSFLDRFYKSTRSMGPMERAVFLEKDREMEDAHSVAATAGETAPPENVNTHFICFTCVDG 180
           GSFLDRF+KST+SM PMERAVFL +DREME AHSVAA AG+T  PE V+THFICF+CVDG
Sbjct: 121 GSFLDRFFKSTKSMDPMERAVFLGEDREMEVAHSVAANAGDTTAPEKVDTHFICFSCVDG 180

Query: 181 KLYELDGRKSGPISHGVSSPSSLLEDAAEVIKGMISKNPDSLSFNVIAVSKKVGDTS 238
            LYELDG KS PISHG SSP +LL+D A+VIK +ISKNPDSL FNVIA+SKKVGD S
Sbjct: 181 VLYELDGMKSMPISHGASSPDTLLQDTAKVIKDIISKNPDSLRFNVIAISKKVGDAS 237

[Close]

BLAST of Carg12035 vs. ExPASy TrEMBL
Match: A0A6J1E676 (Ubiquitin carboxyl-terminal hydrolase OS=Cucurbita moschata OX=3662 GN=LOC111431087 PE=3 SV=1)

HSP 1 Score: 401.4 bits (1030), Expect = 2.7e-108
Identity = 194/237 (81.86%), Postives = 216/237 (91.14%), Query Frame = 0


Query: 1   MATIDESPSAKRWLPLEANPDVMNQFLWGLGLPEDEAECNDVYGLDEALLSMVPKPVLAV 60
           MA++D+S SAKRWLPLEANPDVMNQFLWGLGLPEDEAECNDVYGLDE LL MVPKPVLAV
Sbjct: 1   MASVDQSSSAKRWLPLEANPDVMNQFLWGLGLPEDEAECNDVYGLDEELLDMVPKPVLAV 60

Query: 61  LFLYPITQKSEEERLQQDKDAKKDHSDRVYFMKQTVGNACGTIGLLHAIGNVTSEIKLSE 120
           +FLYPITQK ++ERLQQ++DAK D+SD+VYFMKQTVGNACGTIGLLHAIGN+TSEIKLSE
Sbjct: 61  VFLYPITQKCKDERLQQEEDAKNDYSDQVYFMKQTVGNACGTIGLLHAIGNITSEIKLSE 120

Query: 121 GSFLDRFYKSTRSMGPMERAVFLEKDREMEDAHSVAATAGETAPPENVNTHFICFTCVDG 180
           GSFLDRF+KST+SM PMERAVFL +DREME AHSVAA AG+T  PE V+THFICF+CVDG
Sbjct: 121 GSFLDRFFKSTKSMDPMERAVFLGEDREMEVAHSVAANAGDTTAPEKVDTHFICFSCVDG 180

Query: 181 KLYELDGRKSGPISHGVSSPSSLLEDAAEVIKGMISKNPDSLSFNVIAVSKKVGDTS 238
            LYELDG KS PISHG SSP +LL+D A+VIK +ISKNPDSL FNVIA+SKKVGD S
Sbjct: 181 VLYELDGMKSKPISHGASSPDTLLQDTAKVIKDIISKNPDSLRFNVIAISKKVGDAS 237

[Close]

BLAST of Carg12035 vs. ExPASy TrEMBL
Match: A0A5A7TC70 (Ubiquitin carboxyl-terminal hydrolase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1017G00590 PE=3 SV=1)

HSP 1 Score: 396.4 bits (1017), Expect = 8.6e-107
Identity = 193/233 (82.83%), Postives = 213/233 (91.42%), Query Frame = 0


Query: 5   DESPSAKRWLPLEANPDVMNQFLWGLGLPEDEAECNDVYGLDEALLSMVPKPVLAVLFLY 64
           + S SAKRWLPLEANPDVMNQFLWGLGLPEDEAEC DVYGLD+ LL MVPKPVLAVLFLY
Sbjct: 58  ETSSSAKRWLPLEANPDVMNQFLWGLGLPEDEAECGDVYGLDDELLDMVPKPVLAVLFLY 117

Query: 65  PITQKSEEERLQQDKDAKKDHSDRVYFMKQTVGNACGTIGLLHAIGNVTSEIKLSEGSFL 124
           PIT+KSEEER QQ+K+AKKD+S+ VYFMKQTVGNACGTIGLLHAIGN+TSEIKLSEGSFL
Sbjct: 118 PITEKSEEERRQQEKEAKKDYSNEVYFMKQTVGNACGTIGLLHAIGNITSEIKLSEGSFL 177

Query: 125 DRFYKSTRSMGPMERAVFLEKDREMEDAHSVAATAGETAPPENVNTHFICFTCVDGKLYE 184
           DRF+KST+SM P+ERA FLEKD EME AHSVAATAG+TA PENV+THFICF+CVDG LYE
Sbjct: 178 DRFFKSTKSMDPIERAAFLEKDNEMEVAHSVAATAGDTAAPENVDTHFICFSCVDGTLYE 237

Query: 185 LDGRKSGPISHGVSSPSSLLEDAAEVIKGMISKNPDSLSFNVIAVSKKVGDTS 238
           LDGRK+ PISHG SSP+SLL+DAA VIK MIS NPDSL+FNVIA+SKK G+ S
Sbjct: 238 LDGRKTEPISHGPSSPNSLLQDAARVIKDMISDNPDSLNFNVIAISKKTGEGS 290

[Close]

BLAST of Carg12035 vs. TAIR 10
Match: AT4G17510.1 (ubiquitin C-terminal hydrolase 3 )

HSP 1 Score: 365.9 bits (938), Expect = 2.4e-101
Identity = 176/233 (75.54%), Postives = 205/233 (87.98%), Query Frame = 0


Query: 1   MATIDESPSAKRWLPLEANPDVMNQFLWGLGLPEDEAECNDVYGLDEALLSMVPKPVLAV 60
           MAT  ES S+KRWLPLE+NPDVMNQ+LWGLGL  DEAECNDVYGLD+ LL MVPKPVLAV
Sbjct: 1   MATASESSSSKRWLPLESNPDVMNQYLWGLGLAPDEAECNDVYGLDDELLEMVPKPVLAV 60

Query: 61  LFLYPITQKSEEERLQQDKDAK-KDHSDRVYFMKQTVGNACGTIGLLHAIGNVTSEIKLS 120
           LFLYPIT+KSEEER++QDK+ K K HSD+VYFMKQTVGNACGTIGLLHAIGN+TSEIKLS
Sbjct: 61  LFLYPITKKSEEERIEQDKEIKEKVHSDKVYFMKQTVGNACGTIGLLHAIGNITSEIKLS 120

Query: 121 EGSFLDRFYKSTRSMGPMERAVFLEKDREMEDAHSVAATAGETAPPENVNTHFICFTCVD 180
           +GSFLDRF+KST +M PMERA FLE D ++EDAHSVA  AG+T   E+ +THFIC  CV+
Sbjct: 121 DGSFLDRFFKSTANMTPMERAKFLENDSQIEDAHSVAVIAGDTPASEDADTHFICLACVE 180

Query: 181 GKLYELDGRKSGPISHGVSSPSSLLEDAAEVIKGMISKNPDSLSFNVIAVSKK 233
           G+LYELDGRK+GPISHG SSP++LL+DA +VIK MI KNP SL+FN+IA+SK+
Sbjct: 181 GELYELDGRKAGPISHGASSPATLLKDATKVIKKMIEKNPGSLNFNLIAISKR 233

[Close]

BLAST of Carg12035 vs. TAIR 10
Match: AT5G16310.1 (Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1 )

HSP 1 Score: 72.0 bits (175), Expect = 7.2e-13
Identity = 60/237 (25.32%), Postives = 110/237 (46.41%), Query Frame = 0


Query: 13  WLPLEANPDVMNQFLWGLGLPEDEAECNDVYGLDEALLSMVPKPVLAVLFLYPITQKSEE 72
           WLP+E++P +  + +  + +   + E  ++Y LD   L  + +PV  ++ LY    + +E
Sbjct: 3   WLPVESDPGIFTEIIQQMQVKGVQVE--ELYSLDFNSLDEI-RPVYGLILLYKWRPEEKE 62

Query: 73  ERLQQDKDAKKDHSDRVYFMKQTVGNACGTIGLLHAIGNVTSEIKLSEGSFLDRFYKSTR 132
            R+        + +   +F  Q + NAC T  +L  + N +S   +  GS L    +  +
Sbjct: 63  NRV-----VITEPNPNFFFASQIINNACATQAILSVLMNSSS---IDIGSELSELKQFAK 122

Query: 133 SMGPMERAVFLEKDREMEDAHSVAATAG--------ETAPPENVNT-----HFICFTCVD 192
              P  + + +  +  +  AH+  A           E A  +N++      H+I +  VD
Sbjct: 123 EFPPELKGLAINNNEAIRAAHNTFARPDPSSIMEDEELAAAKNLDEDDDVYHYISYLPVD 182

Query: 193 GKLYELDGRKSGPISHG--VSSPSSL--LEDAAEVIKGMISK-NPDSLSFNVIAVSK 232
           G LYELDG K GPIS G  +  P  +  L     V++  I + + + + F+++AV K
Sbjct: 183 GILYELDGLKEGPISLGQCLGEPEGIEWLRMVQPVVQEQIDRYSQNEIRFSLLAVVK 228

[Close]

BLAST of Carg12035 vs. TAIR 10
Match: AT1G65650.1 (Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1 )

HSP 1 Score: 68.6 bits (166), Expect = 7.9e-12
Identity = 62/235 (26.38%), Postives = 105/235 (44.68%), Query Frame = 0


Query: 13  WLPLEANPDVMNQFLWGLGLPEDEAECNDVYGLDEALLSMVPKPVLAVLFLYPITQKSEE 72
           W  +E++P V  + +  + +   + E  ++Y LD   L+ + +PV  ++FL+      ++
Sbjct: 3   WCTIESDPGVFTELIQQMQVKGVQVE--ELYSLDSDSLNNL-RPVYGLIFLFKWQAGEKD 62

Query: 73  ERLQQDKDAKKDHSDRVYFMKQTVGNACGTIGLLHAIGNVTSEIKLSEGSFLDRFYKSTR 132
           ER        +D    ++F  Q + NAC T  +L  + N + E+ +  G  L    + T+
Sbjct: 63  ER-----PTIQDQVSNLFFANQVINNACATQAILAILLN-SPEVDI--GPELSALKEFTK 122

Query: 133 SMGPMERAVFLEKDREMEDAHSVAATAGETAPPENVNT-------HFICFTCVDGKLYEL 192
           +     + + +     +  AH+  A      P E           HFI +  VDG LYEL
Sbjct: 123 NFPSDLKGLAINNSDSIRAAHNSFARPEPFVPEEQKAATKDDDVYHFISYIPVDGVLYEL 182

Query: 193 DGRKSGPIS----HGVSSPSSLLEDAAEVIKGMISKNPDS-LSFNVIAVSKKVGD 236
           DG K GPIS     G  +    L+    VI+  I +   S + FN++AV K   D
Sbjct: 183 DGLKEGPISLGPCPGDQTGIEWLQMVQPVIQERIERYSQSEIRFNLLAVIKNRKD 226

The following BLAST results are available for this feature:

BLAST of Carg12035 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7030152.1	6.1e-131	100.00	Ubiquitin carboxyl-terminal hydrolase 3 [Cucurbita argyrosperma subsp. argyrospe...	[more]
XP_022951470.1	1.5e-129	99.16	ubiquitin carboxyl-terminal hydrolase 3-like [Cucurbita moschata]	[more]
XP_023540841.1	4.4e-129	99.16	ubiquitin carboxyl-terminal hydrolase 3-like [Cucurbita pepo subsp. pepo]	[more]
XP_023005521.1	8.5e-125	96.20	ubiquitin carboxyl-terminal hydrolase 3-like [Cucurbita maxima]	[more]
XP_038903625.1	8.8e-114	86.50	ubiquitin carboxyl-terminal hydrolase 3-like [Benincasa hispida]	[more]

BLAST of Carg12035 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GWE1	3.4e-100	75.54	Ubiquitin carboxyl-terminal hydrolase 3 OS=Arabidopsis thaliana OX=3702 GN=UCH3 ...	[more]
Q2TBG8	1.4e-53	50.88	Ubiquitin carboxyl-terminal hydrolase isozyme L3 OS=Bos taurus OX=9913 GN=UCHL3 ...	[more]
P15374	2.4e-53	50.88	Ubiquitin carboxyl-terminal hydrolase isozyme L3 OS=Homo sapiens OX=9606 GN=UCHL...	[more]
Q9JKB1	2.4e-53	50.88	Ubiquitin carboxyl-terminal hydrolase isozyme L3 OS=Mus musculus OX=10090 GN=Uch...	[more]
Q06AB3	2.4e-53	50.88	Ubiquitin carboxyl-terminal hydrolase isozyme L3 OS=Sus scrofa OX=9823 GN=UCHL3 ...	[more]

BLAST of Carg12035 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GIV7	7.3e-130	99.16	Ubiquitin carboxyl-terminal hydrolase OS=Cucurbita moschata OX=3662 GN=LOC111454...	[more]
A0A6J1KV75	4.1e-125	96.20	Ubiquitin carboxyl-terminal hydrolase OS=Cucurbita maxima OX=3661 GN=LOC11149848...	[more]
A0A6J1HQ82	1.4e-109	82.70	Ubiquitin carboxyl-terminal hydrolase OS=Cucurbita maxima OX=3661 GN=LOC11146510...	[more]
A0A6J1E676	2.7e-108	81.86	Ubiquitin carboxyl-terminal hydrolase OS=Cucurbita moschata OX=3662 GN=LOC111431...	[more]
A0A5A7TC70	8.6e-107	82.83	Ubiquitin carboxyl-terminal hydrolase OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]

BLAST of Carg12035 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G17510.1	2.4e-101	75.54	ubiquitin C-terminal hydrolase 3	[more]
AT5G16310.1	7.2e-13	25.32	Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1	[more]
AT1G65650.1	7.9e-12	26.38	Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001578	Peptidase C12, ubiquitin carboxyl-terminal hydrolase	PRINTS	PR00707	UBCTHYDRLASE	coord: 15..32 score: 49.21 coord: 53..65 score: 52.75 coord: 166..177 score: 40.48 coord: 94..111 score: 65.87 coord: 182..192 score: 74.03
IPR001578	Peptidase C12, ubiquitin carboxyl-terminal hydrolase	PFAM	PF01088	Peptidase_C12	coord: 13..215 e-value: 3.2E-60 score: 203.5
IPR001578	Peptidase C12, ubiquitin carboxyl-terminal hydrolase	PANTHER	PTHR10589	UBIQUITIN CARBOXYL-TERMINAL HYDROLASE	coord: 7..235
IPR036959	Peptidase C12, ubiquitin carboxyl-terminal hydrolase superfamily	GENE3D	3.40.532.10		coord: 7..232 e-value: 1.2E-78 score: 265.6
None	No IPR available	PANTHER	PTHR10589:SF44	UBIQUITIN CARBOXYL-TERMINAL HYDROLASE	coord: 7..235
None	No IPR available	CDD	cd09616	Peptidase_C12_UCH_L1_L3	coord: 13..228 e-value: 4.45656E-114 score: 323.819
IPR038765	Papain-like cysteine peptidase superfamily	SUPERFAMILY	54001	Cysteine proteinases	coord: 11..232

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg12035-RA	Carg12035-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016579	protein deubiquitination
biological_process	GO:0006511	ubiquitin-dependent protein catabolic process
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0004843	thiol-dependent deubiquitinase