Carg11977 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg11977
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	transmembrane protein 184A-like
Location	Carg_Chr05: 8939111 .. 8941947 (-)
RNA-Seq Expression	Carg11977
Synteny	Carg11977

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TTAATTGTTCATTTGGTGGCAGACTCTAGGGTTTCTGTGAATCTTCTCATTTGTTGTCGGGATCAGGCTTCTGAAGTAGCAACAGGCAAGTGAGGTACTTTTCTTCCTGGTTAATGTCTTTAGTGTTGATGAATTATCATTCCTTCACAAAAAAACTACTAATTTGATCCTATAGATAATTTGTGCACGCACCTTGGTGATCAATTTTCAGAATGGGGGAAGTGGTTCCTATCTACTACAGCATTATTGCGTTTATTTGCACGGTTGGAGCCATTGCTCTGGCAGTTTTTCATATCTACCGGCATCTTTTGAACTATACGGAACCTACTTATCAGAGATATATCGTGCGGATCATCTTTATGGTCCCGGTTAGTTTTCCTTCCTCCCATTTTGTATATATTTAAGAACGGATCCTTCGGGTTTTTTTTTGGTTGTGGTTTAGTTTTGAAGCTTCCTTGTTGATATTTTCATGCTTGAAGATCATGTATCTCTGATTTATGCACAACTACATATTATGTTCCTTATGCTTGATTCAAGCTTGAGTTTCTTGATTTCACGACAATTTATACACTCGTTCATTTGTTGTTTGTTTTTCATTTTGTTATCCTGTGTGCATTCTTAGACATTTACTTTATATGATATTGTATTATAAAATAATATATTATTTGTCCGAGGAGGAAGCTCAGTTGTTGGGAAATCACAAGAGTCTAACTTCTGACCGTAGAGGAAGTTGAGTATAAGTTTGAAAAGTGAGAGAGGCAGTTTGTTTAGCTTTTTCTCAAGATGTCTTAGCCTCCATTCTTATCTTCTTTCCACATTCCATCAAACTAGCATAACTTTGGAGAAATTCCGGAGACTTCAATTGGGAAAGTTCAAATATTGAAAGTGAAACAGTTTAGATAGCTAGGATTGGATTTCTTTGACCCTGGATAAAGGATGTCTAGGCTGTAAATATTTGAAAAGAAAATGATGCTCGTTTGAAGGAGATTTCCCTGAGAAGGAGAAGAGCTTCATGACAGTTCATTATGAAGAGAAAATATGGATCCATTCCCGTTGTTTGGTGTACTAACAATGGATTTTTTTTTTTTAAATTAAGAAATGATTTGTCAATTTTAGTATTATTTTTACTGCTATGGTTATTATTGATAATAGCACCACATTCATTAAGGAAAATGTAAGAAATACAATAGAAGTCACAAAAAACCAGGGCAACAATAAGGAGCAACCACCGTAAAAAATTGAGAGAAAATTTCAGAAGGAAAACAAGTTGCAGCTAAAATCCAAAGGGAAGTAATGAAATGAACATCAGAATGAACATGGAAATGCCCTGTTCTTCTTATCAAGCCCAAGATGCCCCGAAATAAGCATGAGCATCTCTAATATATTGGCTTACATCGTTAGGTAGTCTAAACATTGAAAGGAGCTATAGCGGCATACCGTTCAAAGTAGTCTTAATAAGGTTGAATCTTTCCCTTTTTGAGAAGAACGACTGCTACTGAGAAGAAGGACCTTTATAAATCATTGATCACATAGGATTCCAGAAGGAACCTGTCTAGGATTATCACTCGAAGGGAAGAAAAAGCATGGAGAAGGGAGTTCATTCTGCATTTTGTTCTCTTTGTACAAGCTTTTTTCTTTTTGTGTTTCTCCATGTACTCAAATCTTTATTTTTTTAATAAGAAAATTTGTTCATCCATGGGTGCTGTAGCATACGGAACACATTCTATACTGACGACAACATTGCACCAGGCTCCTTTCTAAGGGATGTTCCTAGAATTTTTACATTCCCCTGCTCCAAAAAAGAAAATAATAATAATAAAATCAGTAGAATGTGGTTAATAGCTGCAAGCTTTAAAGAATTTGTTTTGAAGCAGAAATGAGCAATGAGTTAGTCTTGTTCAGAATGGTTATATGATGTTAACTCCAAAGTCAGAGAGATCTCTTGTAGCTTTGGAAGCTCTGGTGCTTTCCCTTATAAATCCGTTGCCTTTCTTCTAATGCAATCAATCCTAATTTCCATAAAGAACCTCTCCTAGTCCTTTGTGATATGGAAAAGAAAAACCCACAAGTAAAAAATTTCCCTGCTAGCTCTTAAAATGACAAATGGAAAATTTTCTTTATCTGTTTCAAATTAAAAATATGTGGTGTGGAATCATCCAATTCTTTAATTACCTTTCATTTGCTTATGGTTGCAAAGCCATTGTATGATTGGGACCAAGTTCCTCTATTAACATTTTGGTGCAGAACTATTTGGACCTACGTTCAAGAATAGAGTTAGAAACCATGAATAAATTGTGTTCTTAGATTACAAATGGTTAACCGTTGTTGGATGATGGAAGTCCCACATTGGCTAATTAGAGAATGATCATGGGTTTATAAGTGAGGAATACTAACTCCATTGGTTTGAGGCCTTTTGGGGAAGCCCAAAGCAAAGCCATGAGAGCTTATGCTCAAAGTGGACAATATCATACCATTGTGGAGAGTCGTGGTCGTCTAACAATCGTGACAGAGGAAATACATCTGACTACAACTATTGTTTGCATAATATGTTATTCATTCATCTCTCCTTTTCACACCATCTCTTGGCTCCAAATTCTCGAAGTTTACTGTTGGTTATTCTCAACATGTGCCTTATTATGCTTTTATATATGTAATTTCTAACTAAATCCTTTGTTTGTGTTCTTTCCTTCTTTCTCTTTTTGTTTTCCTTTTTGCAATACATTATTCGCAAATTCTAAAAGTGCTTCCTCGGATTACAGGTTTATGCACTGATGTCCTTCTTGTCTCTTGTTTTACCTTCGAGTTCAATCTATTTTAATTCCATACGGGAAGTGTAA

mRNA sequence

TTAATTGTTCATTTGGTGGCAGACTCTAGGGTTTCTGTGAATCTTCTCATTTGTTGTCGGGATCAGGCTTCTGAAGTAGCAACAGGCAAAATGGGGGAAGTGGTTCCTATCTACTACAGCATTATTGCGTTTATTTGCACGGTTGGAGCCATTGCTCTGGCAGTTTTTCATATCTACCGGCATCTTTTGAACTATACGGAACCTACTTATCAGAGATATATCGTGCGGATCATCTTTATGGTCCCGGTTTATGCACTGATGTCCTTCTTGTCTCTTGTTTTACCTTCGAGTTCAATCTATTTTAATTCCATACGGGAAGTGTAA

Coding sequence (CDS)

TTAATTGTTCATTTGGTGGCAGACTCTAGGGTTTCTGTGAATCTTCTCATTTGTTGTCGGGATCAGGCTTCTGAAGTAGCAACAGGCAAAATGGGGGAAGTGGTTCCTATCTACTACAGCATTATTGCGTTTATTTGCACGGTTGGAGCCATTGCTCTGGCAGTTTTTCATATCTACCGGCATCTTTTGAACTATACGGAACCTACTTATCAGAGATATATCGTGCGGATCATCTTTATGGTCCCGGTTTATGCACTGATGTCCTTCTTGTCTCTTGTTTTACCTTCGAGTTCAATCTATTTTAATTCCATACGGGAAGTGTAA

Protein sequence

LIVHLVADSRVSVNLLICCRDQASEVATGKMGEVVPIYYSIIAFICTVGAIALAVFHIYRHLLNYTEPTYQRYIVRIIFMVPVYALMSFLSLVLPSSSIYFNSIREV

Homology

[Close]

BLAST of Carg11977 vs. NCBI nr
Match: KAG7030096.1 (Transmembrane protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 203.4 bits (516), Expect = 1.0e-48
Identity = 107/107 (100.00%), Postives = 107/107 (100.00%), Query Frame = 0


Query: 1   LIVHLVADSRVSVNLLICCRDQASEVATGKMGEVVPIYYSIIAFICTVGAIALAVFHIYR 60
           LIVHLVADSRVSVNLLICCRDQASEVATGKMGEVVPIYYSIIAFICTVGAIALAVFHIYR
Sbjct: 1   LIVHLVADSRVSVNLLICCRDQASEVATGKMGEVVPIYYSIIAFICTVGAIALAVFHIYR 60

Query: 61  HLLNYTEPTYQRYIVRIIFMVPVYALMSFLSLVLPSSSIYFNSIREV 108
           HLLNYTEPTYQRYIVRIIFMVPVYALMSFLSLVLPSSSIYFNSIREV
Sbjct: 61  HLLNYTEPTYQRYIVRIIFMVPVYALMSFLSLVLPSSSIYFNSIREV 107

[Close]

BLAST of Carg11977 vs. NCBI nr
Match: XP_022999694.1 (transmembrane protein 184A-like [Cucurbita maxima] >XP_022999695.1 transmembrane protein 184A-like [Cucurbita maxima])

HSP 1 Score: 147.1 bits (370), Expect = 8.5e-32
Identity = 77/77 (100.00%), Postives = 77/77 (100.00%), Query Frame = 0


Query: 31  MGEVVPIYYSIIAFICTVGAIALAVFHIYRHLLNYTEPTYQRYIVRIIFMVPVYALMSFL 90
           MGEVVPIYYSIIAFICTVGAIALAVFHIYRHLLNYTEPTYQRYIVRIIFMVPVYALMSFL
Sbjct: 1   MGEVVPIYYSIIAFICTVGAIALAVFHIYRHLLNYTEPTYQRYIVRIIFMVPVYALMSFL 60

Query: 91  SLVLPSSSIYFNSIREV 108
           SLVLPSSSIYFNSIREV
Sbjct: 61  SLVLPSSSIYFNSIREV 77

[Close]

BLAST of Carg11977 vs. NCBI nr
Match: KAG6599155.1 (Transmembrane protein 184A, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 147.1 bits (370), Expect = 8.5e-32
Identity = 77/77 (100.00%), Postives = 77/77 (100.00%), Query Frame = 0


Query: 31  MGEVVPIYYSIIAFICTVGAIALAVFHIYRHLLNYTEPTYQRYIVRIIFMVPVYALMSFL 90
           MGEVVPIYYSIIAFICTVGAIALAVFHIYRHLLNYTEPTYQRYIVRIIFMVPVYALMSFL
Sbjct: 1   MGEVVPIYYSIIAFICTVGAIALAVFHIYRHLLNYTEPTYQRYIVRIIFMVPVYALMSFL 60

Query: 91  SLVLPSSSIYFNSIREV 108
           SLVLPSSSIYFNSIREV
Sbjct: 61  SLVLPSSSIYFNSIREV 77

[Close]

BLAST of Carg11977 vs. NCBI nr
Match: XP_022946050.1 (transmembrane protein 184A-like [Cucurbita moschata] >XP_022946051.1 transmembrane protein 184A-like [Cucurbita moschata])

HSP 1 Score: 147.1 bits (370), Expect = 8.5e-32
Identity = 77/77 (100.00%), Postives = 77/77 (100.00%), Query Frame = 0


Query: 31  MGEVVPIYYSIIAFICTVGAIALAVFHIYRHLLNYTEPTYQRYIVRIIFMVPVYALMSFL 90
           MGEVVPIYYSIIAFICTVGAIALAVFHIYRHLLNYTEPTYQRYIVRIIFMVPVYALMSFL
Sbjct: 1   MGEVVPIYYSIIAFICTVGAIALAVFHIYRHLLNYTEPTYQRYIVRIIFMVPVYALMSFL 60

Query: 91  SLVLPSSSIYFNSIREV 108
           SLVLPSSSIYFNSIREV
Sbjct: 61  SLVLPSSSIYFNSIREV 77

[Close]

BLAST of Carg11977 vs. NCBI nr
Match: XP_023545279.1 (transmembrane protein 184A-like [Cucurbita pepo subsp. pepo] >XP_023545280.1 transmembrane protein 184A-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 147.1 bits (370), Expect = 8.5e-32
Identity = 77/77 (100.00%), Postives = 77/77 (100.00%), Query Frame = 0


Query: 31  MGEVVPIYYSIIAFICTVGAIALAVFHIYRHLLNYTEPTYQRYIVRIIFMVPVYALMSFL 90
           MGEVVPIYYSIIAFICTVGAIALAVFHIYRHLLNYTEPTYQRYIVRIIFMVPVYALMSFL
Sbjct: 1   MGEVVPIYYSIIAFICTVGAIALAVFHIYRHLLNYTEPTYQRYIVRIIFMVPVYALMSFL 60

Query: 91  SLVLPSSSIYFNSIREV 108
           SLVLPSSSIYFNSIREV
Sbjct: 61  SLVLPSSSIYFNSIREV 77

[Close]

BLAST of Carg11977 vs. ExPASy Swiss-Prot
Match: Q54WM0 (Transmembrane protein 184 homolog DDB_G0279555 OS=Dictyostelium discoideum OX=44689 GN=tmem184C PE=3 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 3.6e-09
Identity = 32/66 (48.48%), Postives = 48/66 (72.73%), Query Frame = 0


Query: 41  IIAFICTVGAIALAVFHIYRHLLNYTEPTYQRYIVRIIFMVPVYALMSFLSLVLPSSSIY 100
           I+A +C+  AI L+ + IY+HL NYT P  Q+YIVRI+ MVP+Y++ S+LSL     S+Y
Sbjct: 3   IVAGVCSGVAILLSFYLIYKHLRNYTNPELQKYIVRILIMVPIYSVDSWLSLRFVELSLY 62

Query: 101 FNSIRE 107
           F+ +R+
Sbjct: 63  FDVVRD 68

[Close]

BLAST of Carg11977 vs. ExPASy Swiss-Prot
Match: Q54PI4 (Transmembrane protein 184 homolog DDB_G0284525 OS=Dictyostelium discoideum OX=44689 GN=tmem184A PE=3 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 1.4e-08
Identity = 33/74 (44.59%), Postives = 51/74 (68.92%), Query Frame = 0


Query: 35  VPIYYSI--IAFICTVGAIALAVFHIYRHLLNYTEPTYQRYIVRIIFMVPVYALMSFLSL 94
           VP  Y++  +A +  + A  L+   IY+HL  YT+P +QRYIVRI+FM+P+YA+ S LSL
Sbjct: 46  VPALYAMFALASLFVLLATILSAHLIYKHLKYYTQPDHQRYIVRIVFMIPIYAIYSLLSL 105

Query: 95  VLPSSSIYFNSIRE 107
           +L +  +YF  +R+
Sbjct: 106 LLHNYQVYFALLRD 119

[Close]

BLAST of Carg11977 vs. ExPASy Swiss-Prot
Match: Q1RMW2 (Transmembrane protein 184A OS=Bos taurus OX=9913 GN=TMEM184A PE=1 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 4.9e-06
Identity = 30/60 (50.00%), Postives = 41/60 (68.33%), Query Frame = 0


Query: 50  AIALAVFHIYRHLLNYTEPTYQRYIVRIIFMVPVYALMSFLSLVLPSSS---IYFNSIRE 107
           A+ L    IY HL +YT P  QRYI+R++F+VPVYA  S+LSL+L       IYF+S+R+
Sbjct: 56  ALVLTGHQIYLHLRSYTVPHEQRYIIRLLFIVPVYAFDSWLSLLLLGGHQHYIYFDSVRD 115

[Close]

BLAST of Carg11977 vs. ExPASy Swiss-Prot
Match: Q6ZMB5 (Transmembrane protein 184A OS=Homo sapiens OX=9606 GN=TMEM184A PE=1 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 1.9e-05
Identity = 27/60 (45.00%), Postives = 40/60 (66.67%), Query Frame = 0


Query: 50  AIALAVFHIYRHLLNYTEPTYQRYIVRIIFMVPVYALMSFLSLVLPSSS---IYFNSIRE 107
           A+ L    IY HL +YT P  QRYI+R++ +VP+YA  S+LSL+L       +YF+S+R+
Sbjct: 66  ALVLTCHQIYLHLRSYTVPQEQRYIIRLLLIVPIYAFDSWLSLLLLGDHQYYVYFDSVRD 125

[Close]

BLAST of Carg11977 vs. ExPASy Swiss-Prot
Match: Q3UFJ6 (Transmembrane protein 184A OS=Mus musculus OX=10090 GN=Tmem184a PE=1 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 1.9e-05
Identity = 26/60 (43.33%), Postives = 41/60 (68.33%), Query Frame = 0


Query: 50  AIALAVFHIYRHLLNYTEPTYQRYIVRIIFMVPVYALMSFLSLVLPSSS---IYFNSIRE 107
           A+ L    IY HL +YT P  QR+++R++F+VP+YA  S+LSL+L       +YF+S+R+
Sbjct: 69  ALLLTGHQIYSHLRSYTAPREQRFVIRLLFIVPIYAFDSWLSLLLLGGHPYYVYFDSVRD 128

[Close]

BLAST of Carg11977 vs. ExPASy TrEMBL
Match: A0A0A0LM63 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G035410 PE=4 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 1.8e-32
Identity = 82/102 (80.39%), Postives = 87/102 (85.29%), Query Frame = 0


Query: 6   VADSRVSVNLLICCRDQASEVATGKMGEVVPIYYSIIAFICTVGAIALAVFHIYRHLLNY 65
           VA +RV VNL I    +  +    +MGEVVPIYYSIIAF CT GAIALA+FHIYRHLLNY
Sbjct: 93  VAQTRVCVNLHIVIEIRLLK----QMGEVVPIYYSIIAFFCTAGAIALAIFHIYRHLLNY 152

Query: 66  TEPTYQRYIVRIIFMVPVYALMSFLSLVLPSSSIYFNSIREV 108
           TEPTYQRYIVRIIFMVPVYALMSFLSLVLPSSSIYFNSIREV
Sbjct: 153 TEPTYQRYIVRIIFMVPVYALMSFLSLVLPSSSIYFNSIREV 190

[Close]

BLAST of Carg11977 vs. ExPASy TrEMBL
Match: A0A6J1KHU5 (transmembrane protein 184A-like OS=Cucurbita maxima OX=3661 GN=LOC111493971 PE=4 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 4.1e-32
Identity = 77/77 (100.00%), Postives = 77/77 (100.00%), Query Frame = 0


Query: 31  MGEVVPIYYSIIAFICTVGAIALAVFHIYRHLLNYTEPTYQRYIVRIIFMVPVYALMSFL 90
           MGEVVPIYYSIIAFICTVGAIALAVFHIYRHLLNYTEPTYQRYIVRIIFMVPVYALMSFL
Sbjct: 1   MGEVVPIYYSIIAFICTVGAIALAVFHIYRHLLNYTEPTYQRYIVRIIFMVPVYALMSFL 60

Query: 91  SLVLPSSSIYFNSIREV 108
           SLVLPSSSIYFNSIREV
Sbjct: 61  SLVLPSSSIYFNSIREV 77

[Close]

BLAST of Carg11977 vs. ExPASy TrEMBL
Match: A0A6J1G2Q4 (transmembrane protein 184A-like OS=Cucurbita moschata OX=3662 GN=LOC111450258 PE=4 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 4.1e-32
Identity = 77/77 (100.00%), Postives = 77/77 (100.00%), Query Frame = 0


Query: 31  MGEVVPIYYSIIAFICTVGAIALAVFHIYRHLLNYTEPTYQRYIVRIIFMVPVYALMSFL 90
           MGEVVPIYYSIIAFICTVGAIALAVFHIYRHLLNYTEPTYQRYIVRIIFMVPVYALMSFL
Sbjct: 1   MGEVVPIYYSIIAFICTVGAIALAVFHIYRHLLNYTEPTYQRYIVRIIFMVPVYALMSFL 60

Query: 91  SLVLPSSSIYFNSIREV 108
           SLVLPSSSIYFNSIREV
Sbjct: 61  SLVLPSSSIYFNSIREV 77

[Close]

BLAST of Carg11977 vs. ExPASy TrEMBL
Match: A0A1S4E266 (transmembrane protein 184A-like OS=Cucumis melo OX=3656 GN=LOC103493816 PE=4 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 1.6e-31
Identity = 75/77 (97.40%), Postives = 76/77 (98.70%), Query Frame = 0


Query: 31  MGEVVPIYYSIIAFICTVGAIALAVFHIYRHLLNYTEPTYQRYIVRIIFMVPVYALMSFL 90
           MGEVVPIYYSIIAF CTVGAIALA+FHIYRHLLNYTEPTYQRYIVRIIFMVPVYALMSFL
Sbjct: 1   MGEVVPIYYSIIAFFCTVGAIALAIFHIYRHLLNYTEPTYQRYIVRIIFMVPVYALMSFL 60

Query: 91  SLVLPSSSIYFNSIREV 108
           SLVLPSSSIYFNSIREV
Sbjct: 61  SLVLPSSSIYFNSIREV 77

[Close]

BLAST of Carg11977 vs. ExPASy TrEMBL
Match: A0A7J6EKU0 (Uncharacterized protein OS=Cannabis sativa OX=3483 GN=G4B88_020616 PE=4 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 1.0e-30
Identity = 73/86 (84.88%), Postives = 78/86 (90.70%), Query Frame = 0


Query: 22  QASEVATGKMGEVVPIYYSIIAFICTVGAIALAVFHIYRHLLNYTEPTYQRYIVRIIFMV 81
           +A  + + KMGE VPIY SI+AF CTVGAIALAVFHIYRHLLNYTEPTYQRYIVRIIFMV
Sbjct: 54  EAWRIRSSKMGEAVPIYLSIVAFFCTVGAIALAVFHIYRHLLNYTEPTYQRYIVRIIFMV 113

Query: 82  PVYALMSFLSLVLPSSSIYFNSIREV 108
           PVYALMSFLSLVLP +SIYFNSIREV
Sbjct: 114 PVYALMSFLSLVLPDTSIYFNSIREV 139

[Close]

BLAST of Carg11977 vs. TAIR 10
Match: AT5G26740.1 (Protein of unknown function (DUF300) )

HSP 1 Score: 129.8 bits (325), Expect = 1.3e-30
Identity = 64/77 (83.12%), Postives = 72/77 (93.51%), Query Frame = 0


Query: 31  MGEVVPIYYSIIAFICTVGAIALAVFHIYRHLLNYTEPTYQRYIVRIIFMVPVYALMSFL 90
           M +++P Y +I+AF+CTVGAIALA+FHIYRHLLNYTEPTYQRYIVRIIFMVPVYA MSFL
Sbjct: 1   MADLIPFYLNIVAFLCTVGAIALAIFHIYRHLLNYTEPTYQRYIVRIIFMVPVYAFMSFL 60

Query: 91  SLVLPSSSIYFNSIREV 108
           SLVLP SSIYF+SIREV
Sbjct: 61  SLVLPKSSIYFDSIREV 77

[Close]

BLAST of Carg11977 vs. TAIR 10
Match: AT5G26740.2 (Protein of unknown function (DUF300) )

HSP 1 Score: 129.8 bits (325), Expect = 1.3e-30
Identity = 64/77 (83.12%), Postives = 72/77 (93.51%), Query Frame = 0


Query: 31  MGEVVPIYYSIIAFICTVGAIALAVFHIYRHLLNYTEPTYQRYIVRIIFMVPVYALMSFL 90
           M +++P Y +I+AF+CTVGAIALA+FHIYRHLLNYTEPTYQRYIVRIIFMVPVYA MSFL
Sbjct: 1   MADLIPFYLNIVAFLCTVGAIALAIFHIYRHLLNYTEPTYQRYIVRIIFMVPVYAFMSFL 60

Query: 91  SLVLPSSSIYFNSIREV 108
           SLVLP SSIYF+SIREV
Sbjct: 61  SLVLPKSSIYFDSIREV 77

[Close]

BLAST of Carg11977 vs. TAIR 10
Match: AT5G26740.3 (Protein of unknown function (DUF300) )

HSP 1 Score: 129.8 bits (325), Expect = 1.3e-30
Identity = 64/77 (83.12%), Postives = 72/77 (93.51%), Query Frame = 0


Query: 31  MGEVVPIYYSIIAFICTVGAIALAVFHIYRHLLNYTEPTYQRYIVRIIFMVPVYALMSFL 90
           M +++P Y +I+AF+CTVGAIALA+FHIYRHLLNYTEPTYQRYIVRIIFMVPVYA MSFL
Sbjct: 1   MADLIPFYLNIVAFLCTVGAIALAIFHIYRHLLNYTEPTYQRYIVRIIFMVPVYAFMSFL 60

Query: 91  SLVLPSSSIYFNSIREV 108
           SLVLP SSIYF+SIREV
Sbjct: 61  SLVLPKSSIYFDSIREV 77

[Close]

BLAST of Carg11977 vs. TAIR 10
Match: AT3G05940.1 (Protein of unknown function (DUF300) )

HSP 1 Score: 126.7 bits (317), Expect = 1.1e-29
Identity = 63/77 (81.82%), Postives = 72/77 (93.51%), Query Frame = 0


Query: 31  MGEVVPIYYSIIAFICTVGAIALAVFHIYRHLLNYTEPTYQRYIVRIIFMVPVYALMSFL 90
           M +++PIY  I+AF+CTVGAIALA+FHIY+HLLNYTEP YQRYIVRI+FMVPVYALMSFL
Sbjct: 1   MADLLPIYLIILAFLCTVGAIALALFHIYKHLLNYTEPIYQRYIVRIVFMVPVYALMSFL 60

Query: 91  SLVLPSSSIYFNSIREV 108
           +LVLP SSIYFNSIREV
Sbjct: 61  ALVLPKSSIYFNSIREV 77

[Close]

BLAST of Carg11977 vs. TAIR 10
Match: AT1G77220.1 (Protein of unknown function (DUF300) )

HSP 1 Score: 45.8 bits (107), Expect = 2.5e-05
Identity = 26/64 (40.62%), Postives = 41/64 (64.06%), Query Frame = 0


Query: 43  AFICTVGAIALAVFHIYRHLLNYTEPTYQRYIVRIIFMVPVYALMSFLSLVLPSSSIYFN 102
           A +  V AI L ++ I+ HL +Y +P  Q++++ +I MVPVYA+ SFLSLV   ++    
Sbjct: 46  ASVFVVIAILLPMYLIFEHLASYNQPEEQKFLIGLILMVPVYAVESFLSLVNSEAAFNCE 105

Query: 103 SIRE 107
            IR+
Sbjct: 106 VIRD 109

The following BLAST results are available for this feature:

BLAST of Carg11977 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7030096.1	1.0e-48	100.00	Transmembrane protein, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022999694.1	8.5e-32	100.00	transmembrane protein 184A-like [Cucurbita maxima] >XP_022999695.1 transmembrane...	[more]
KAG6599155.1	8.5e-32	100.00	Transmembrane protein 184A, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022946050.1	8.5e-32	100.00	transmembrane protein 184A-like [Cucurbita moschata] >XP_022946051.1 transmembra...	[more]
XP_023545279.1	8.5e-32	100.00	transmembrane protein 184A-like [Cucurbita pepo subsp. pepo] >XP_023545280.1 tra...	[more]

BLAST of Carg11977 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q54WM0	3.6e-09	48.48	Transmembrane protein 184 homolog DDB_G0279555 OS=Dictyostelium discoideum OX=44...	[more]
Q54PI4	1.4e-08	44.59	Transmembrane protein 184 homolog DDB_G0284525 OS=Dictyostelium discoideum OX=44...	[more]
Q1RMW2	4.9e-06	50.00	Transmembrane protein 184A OS=Bos taurus OX=9913 GN=TMEM184A PE=1 SV=1	[more]
Q6ZMB5	1.9e-05	45.00	Transmembrane protein 184A OS=Homo sapiens OX=9606 GN=TMEM184A PE=1 SV=1	[more]
Q3UFJ6	1.9e-05	43.33	Transmembrane protein 184A OS=Mus musculus OX=10090 GN=Tmem184a PE=1 SV=1	[more]

BLAST of Carg11977 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LM63	1.8e-32	80.39	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G035410 PE=4 SV=1	[more]
A0A6J1KHU5	4.1e-32	100.00	transmembrane protein 184A-like OS=Cucurbita maxima OX=3661 GN=LOC111493971 PE=4...	[more]
A0A6J1G2Q4	4.1e-32	100.00	transmembrane protein 184A-like OS=Cucurbita moschata OX=3662 GN=LOC111450258 PE...	[more]
A0A1S4E266	1.6e-31	97.40	transmembrane protein 184A-like OS=Cucumis melo OX=3656 GN=LOC103493816 PE=4 SV=...	[more]
A0A7J6EKU0	1.0e-30	84.88	Uncharacterized protein OS=Cannabis sativa OX=3483 GN=G4B88_020616 PE=4 SV=1	[more]

BLAST of Carg11977 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G26740.1	1.3e-30	83.12	Protein of unknown function (DUF300)	[more]
AT5G26740.2	1.3e-30	83.12	Protein of unknown function (DUF300)	[more]
AT5G26740.3	1.3e-30	83.12	Protein of unknown function (DUF300)	[more]
AT3G05940.1	1.1e-29	81.82	Protein of unknown function (DUF300)	[more]
AT1G77220.1	2.5e-05	40.63	Protein of unknown function (DUF300)	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005178	Organic solute transporter subunit alpha/Transmembrane protein 184	PFAM	PF03619	Solute_trans_a	coord: 40..107 e-value: 1.1E-20 score: 74.2
IPR005178	Organic solute transporter subunit alpha/Transmembrane protein 184	PANTHER	PTHR23423	ORGANIC SOLUTE TRANSPORTER-RELATED	coord: 37..107
None	No IPR available	PANTHER	PTHR23423:SF75	BNAC02G48440D PROTEIN	coord: 37..107

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg11977-RA	Carg11977-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane