Carg11967 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg11967
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	UPF0057 membrane protein
Location	Carg_Chr05: 8853053 .. 8853938 (-)
RNA-Seq Expression	Carg11967
Synteny	Carg11967

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGATGGTCAATCGGTTATAAAAGCAATAACAAAATGCAGTACCTCCGCATTGATTAAATCAACCACTCTCTTCCACAACTCTCTCTGATCTCTCTCGAAGCTCGAAAATGGCGAACGGATGTGAGATCTGCTGCGAGATTCTCATCGCCATCCTCATTCCTCCTCTAGGAGTTTGCCTAAAGCACGGCTGTTGCACGGTAATCTTACTTCTTCTTCAATCTCTCTGTAATTTCCCCCAATCTGAACTCCTGGTGACCTAAAACAGCCGACGAAACTGCTCTCTGATCTAAATCAGATGACGTCGATCTGGATTAGGTTTTGGTTTTCGGTCTAATTTTGTGTGGAAATGGTATAATTGCAGGTGGAATTTTGTCTGTGTTTGATTTTGACTCTTCTCGGTTACATTCCGGGGATCATCTACGCACTCTACGCCATCGTCTACGTCGATCGCGACCAGTTCTTCGACGAGTACAGGCGTCCGCTCTATTCTCAGGCGTCGGCGGTATAGAAACCGGTTTGAATCTCTTCAACTCTGTGTTTAGCCTTTTTCGAATAAGGTTGTTAAAACTTTTGGATTGGATTTCATCTACATAGATTTGTTCAACTTTCTGTTTCTTGATTCGGTTGGATTTAGATTTTGTTGAGACACTGTATGGATGTGTGGTCATGAACTTAGACCTAAGATGTTTGGAATAATTTGGATGGCGATGAAAGTTGAAACAAATCGGGACTGATGAAATGTCGGCAATGGCGTTTTGAGAAGTGCCTTAGCGTAGAAATAAATATAGTTGAGGCGTCCTTAAAACCTTCGTAATTTTAAAATTGCTTTAAAAAATAAAATAAAATAAGAAATTACAAAAGAAGGATACTTAGCAAAATTATGTTG

mRNA sequence

GGATGGTCAATCGGTTATAAAAGCAATAACAAAATGCAGTACCTCCGCATTGATTAAATCAACCACTCTCTTCCACAACTCTCTCTGATCTCTCTCGAAGCTCGAAAATGGCGAACGGATGTGAGATCTGCTGCGAGATTCTCATCGCCATCCTCATTCCTCCTCTAGGAGTTTGCCTAAAGCACGGCTGTTGCACGGTGGAATTTTGTCTGTGTTTGATTTTGACTCTTCTCGGTTACATTCCGGGGATCATCTACGCACTCTACGCCATCGTCTACGTCGATCGCGACCAGTTCTTCGACGAGTACAGGCGTCCGCTCTATTCTCAGGCGTCGGCGGTATAGAAACCGGTTTGAATCTCTTCAACTCTGTGTTTAGCCTTTTTCGAATAAGGTTGTTAAAACTTTTGGATTGGATTTCATCTACATAGATTTGTTCAACTTTCTGTTTCTTGATTCGGTTGGATTTAGATTTTGTTGAGACACTGTATGGATGTGTGGTCATGAACTTAGACCTAAGATGTTTGGAATAATTTGGATGGCGATGAAAGTTGAAACAAATCGGGACTGATGAAATGTCGGCAATGGCGTTTTGAGAAGTGCCTTAGCGTAGAAATAAATATAGTTGAGGCGTCCTTAAAACCTTCGTAATTTTAAAATTGCTTTAAAAAATAAAATAAAATAAGAAATTACAAAAGAAGGATACTTAGCAAAATTATGTTG

Coding sequence (CDS)

ATGGCGAACGGATGTGAGATCTGCTGCGAGATTCTCATCGCCATCCTCATTCCTCCTCTAGGAGTTTGCCTAAAGCACGGCTGTTGCACGGTGGAATTTTGTCTGTGTTTGATTTTGACTCTTCTCGGTTACATTCCGGGGATCATCTACGCACTCTACGCCATCGTCTACGTCGATCGCGACCAGTTCTTCGACGAGTACAGGCGTCCGCTCTATTCTCAGGCGTCGGCGGTATAG

Protein sequence

MANGCEICCEILIAILIPPLGVCLKHGCCTVEFCLCLILTLLGYIPGIIYALYAIVYVDRDQFFDEYRRPLYSQASAV

Homology

[Close]

BLAST of Carg11967 vs. NCBI nr
Match: XP_022946545.1 (UPF0057 membrane protein At2g24040-like [Cucurbita moschata] >XP_022999789.1 UPF0057 membrane protein At2g24040-like [Cucurbita maxima] >XP_023523032.1 UPF0057 membrane protein At2g24040-like [Cucurbita pepo subsp. pepo] >XP_023546587.1 UPF0057 membrane protein At2g24040-like [Cucurbita pepo subsp. pepo] >KAG6599143.1 UPF0057 membrane protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7030086.1 UPF0057 membrane protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 162.2 bits (409), Expect = 1.9e-36
Identity = 78/78 (100.00%), Postives = 78/78 (100.00%), Query Frame = 0


Query: 1  MANGCEICCEILIAILIPPLGVCLKHGCCTVEFCLCLILTLLGYIPGIIYALYAIVYVDR 60
          MANGCEICCEILIAILIPPLGVCLKHGCCTVEFCLCLILTLLGYIPGIIYALYAIVYVDR
Sbjct: 1  MANGCEICCEILIAILIPPLGVCLKHGCCTVEFCLCLILTLLGYIPGIIYALYAIVYVDR 60

Query: 61 DQFFDEYRRPLYSQASAV 79
          DQFFDEYRRPLYSQASAV
Sbjct: 61 DQFFDEYRRPLYSQASAV 78

[Close]

BLAST of Carg11967 vs. NCBI nr
Match: XP_022158160.1 (UPF0057 membrane protein At2g24040-like [Momordica charantia])

HSP 1 Score: 155.2 bits (391), Expect = 2.3e-34
Identity = 73/78 (93.59%), Postives = 76/78 (97.44%), Query Frame = 0


Query: 1  MANGCEICCEILIAILIPPLGVCLKHGCCTVEFCLCLILTLLGYIPGIIYALYAIVYVDR 60
          MANGCEICCEILIAILIPPLGVCLKHGCCTVEFCLCLILTLLGY+PGIIYALYAIV+VDR
Sbjct: 1  MANGCEICCEILIAILIPPLGVCLKHGCCTVEFCLCLILTLLGYVPGIIYALYAIVFVDR 60

Query: 61 DQFFDEYRRPLYSQASAV 79
          DQFFDEYRRPLY+  SAV
Sbjct: 61 DQFFDEYRRPLYAPVSAV 78

[Close]

BLAST of Carg11967 vs. NCBI nr
Match: XP_038890692.1 (UPF0057 membrane protein At4g30660-like [Benincasa hispida])

HSP 1 Score: 152.1 bits (383), Expect = 1.9e-33
Identity = 73/78 (93.59%), Postives = 75/78 (96.15%), Query Frame = 0


Query: 1  MANGCEICCEILIAILIPPLGVCLKHGCCTVEFCLCLILTLLGYIPGIIYALYAIVYVDR 60
          MANGCEICCEILIAILIPPLGVCLK GCCTVEFCLCLILTLLGYIPGIIYALYAIV+VDR
Sbjct: 1  MANGCEICCEILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGYIPGIIYALYAIVFVDR 60

Query: 61 DQFFDEYRRPLYSQASAV 79
          DQFFDEYRRPLY+ AS V
Sbjct: 61 DQFFDEYRRPLYAPASTV 78

[Close]

BLAST of Carg11967 vs. NCBI nr
Match: XP_008452728.1 (PREDICTED: UPF0057 membrane protein At4g30660 [Cucumis melo] >KAA0056112.1 UPF0057 membrane protein [Cucumis melo var. makuwa])

HSP 1 Score: 149.1 bits (375), Expect = 1.6e-32
Identity = 70/77 (90.91%), Postives = 73/77 (94.81%), Query Frame = 0


Query: 1  MANGCEICCEILIAILIPPLGVCLKHGCCTVEFCLCLILTLLGYIPGIIYALYAIVYVDR 60
          M NGCEICCEILIAILIPPLGVCLK GCCTVEFCLCLILTLLGY+PGIIYA+YAI +VDR
Sbjct: 1  MVNGCEICCEILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGYVPGIIYAVYAIAFVDR 60

Query: 61 DQFFDEYRRPLYSQASA 78
          DQFFDEYRRPLYS ASA
Sbjct: 61 DQFFDEYRRPLYSSASA 77

[Close]

BLAST of Carg11967 vs. NCBI nr
Match: XP_011648896.1 (UPF0057 membrane protein At4g30660 [Cucumis sativus] >KGN61055.1 hypothetical protein Csa_021360 [Cucumis sativus])

HSP 1 Score: 147.5 bits (371), Expect = 4.7e-32
Identity = 69/77 (89.61%), Postives = 72/77 (93.51%), Query Frame = 0


Query: 1  MANGCEICCEILIAILIPPLGVCLKHGCCTVEFCLCLILTLLGYIPGIIYALYAIVYVDR 60
          M NGCEICCEILIAILIPPLGVCLK GCCTVEFCLCLILTLLGY+PGIIYA+YAI +VDR
Sbjct: 1  MVNGCEICCEILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGYVPGIIYAVYAIAFVDR 60

Query: 61 DQFFDEYRRPLYSQASA 78
          DQFFDEYRRPLYS  SA
Sbjct: 61 DQFFDEYRRPLYSSVSA 77

[Close]

BLAST of Carg11967 vs. ExPASy Swiss-Prot
Match: O82232 (UPF0057 membrane protein At2g24040 OS=Arabidopsis thaliana OX=3702 GN=At2g24040 PE=3 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 1.3e-27
Identity = 53/72 (73.61%), Postives = 66/72 (91.67%), Query Frame = 0


Query: 1  MANGCEICCEILIAILIPPLGVCLKHGCCTVEFCLCLILTLLGYIPGIIYALYAIVYVDR 60
          MA+ CE+CCEI IAIL+PP+GVCL+HGCCTVEF +CLILT LGY+PGIIYA+YAI ++ R
Sbjct: 1  MASSCELCCEIFIAILLPPVGVCLRHGCCTVEFFICLILTCLGYLPGIIYAIYAICFLHR 60

Query: 61 DQFFDEYRRPLY 73
          D++FDEYRRP+Y
Sbjct: 61 DEYFDEYRRPIY 72

[Close]

BLAST of Carg11967 vs. ExPASy Swiss-Prot
Match: Q9SUI0 (UPF0057 membrane protein At4g30660 OS=Arabidopsis thaliana OX=3702 GN=At4g30660 PE=3 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 2.0e-25
Identity = 50/73 (68.49%), Postives = 64/73 (87.67%), Query Frame = 0


Query: 1  MANGCEICCEILIAILIPPLGVCLKHGCCTVEFCLCLILTLLGYIPGIIYALYAIVYVDR 60
          M + CEI CEI+IAIL+PPLGVC + GCCTVEF +CL+LT+LGY+PGIIYA+Y IV+  R
Sbjct: 1  MPSNCEILCEIIIAILLPPLGVCFRKGCCTVEFLICLVLTILGYVPGIIYAIYVIVFQHR 60

Query: 61 DQFFDEYRRPLYS 74
          +++FDEYRRP+YS
Sbjct: 61 EEYFDEYRRPIYS 73

[Close]

BLAST of Carg11967 vs. ExPASy Swiss-Prot
Match: Q9M095 (UPF0057 membrane protein At4g30650 OS=Arabidopsis thaliana OX=3702 GN=At4g30650 PE=3 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 1.6e-19
Identity = 45/61 (73.77%), Postives = 54/61 (88.52%), Query Frame = 0


Query: 1  MANGCEICCEILIAILIPPLGVCLKHGCCTVEFCLCLILTLLGYIPGIIYALYAIVYVDR 60
          MA+  E+ CEILIAIL+PPLGVCLK GCCTVEF +CL+LT+LGYIPGIIYALY IV+ +R
Sbjct: 1  MASNMEVFCEILIAILLPPLGVCLKRGCCTVEFLICLVLTILGYIPGIIYALYVIVFQNR 60

Query: 61 D 62
          +
Sbjct: 61 E 61

[Close]

BLAST of Carg11967 vs. ExPASy Swiss-Prot
Match: Q9LRI7 (Hydrophobic protein OSR8 OS=Oryza sativa subsp. japonica OX=39947 GN=OSR8 PE=3 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 2.2e-16
Identity = 41/68 (60.29%), Postives = 56/68 (82.35%), Query Frame = 0


Query: 1  MANG-CEICCEILIAILIPPLGVCLKHGCCTVEFCLCLILTLLGYIPGIIYALYAIVYVD 60
          MA+G C    EIL+AI++PPLGV L+ GCC++EFC+CL+LT+LGY+PGIIYA+Y +V +D
Sbjct: 1  MASGRCCTFLEILLAIILPPLGVFLRFGCCSMEFCICLLLTILGYVPGIIYAVYVLVALD 60

Query: 61 RDQFFDEY 68
           DQ+  EY
Sbjct: 61 SDQYQREY 68

[Close]

BLAST of Carg11967 vs. ExPASy Swiss-Prot
Match: A2Y075 (Hydrophobic protein LTI6B OS=Oryza sativa subsp. indica OX=39946 GN=LTI6B PE=3 SV=2)

HSP 1 Score: 65.1 bits (157), Expect = 4.1e-10
Identity = 35/52 (67.31%), Postives = 41/52 (78.85%), Query Frame = 0


Query: 4  GCEICCEILIAILIPPLGVCLKHGCCTVEFCLCLILTLLGYIPGIIYALYAI 56
          G   C +ILIAI++PPLGV LK G C  EF +CL+LT LGYIPGIIYA+YAI
Sbjct: 3  GTANCIDILIAIILPPLGVFLKFG-CGHEFWICLLLTFLGYIPGIIYAIYAI 53

[Close]

BLAST of Carg11967 vs. ExPASy TrEMBL
Match: A0A6J1KI35 (UPF0057 membrane protein At2g24040-like OS=Cucurbita maxima OX=3661 GN=LOC111494032 PE=3 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 9.0e-37
Identity = 78/78 (100.00%), Postives = 78/78 (100.00%), Query Frame = 0


Query: 1  MANGCEICCEILIAILIPPLGVCLKHGCCTVEFCLCLILTLLGYIPGIIYALYAIVYVDR 60
          MANGCEICCEILIAILIPPLGVCLKHGCCTVEFCLCLILTLLGYIPGIIYALYAIVYVDR
Sbjct: 1  MANGCEICCEILIAILIPPLGVCLKHGCCTVEFCLCLILTLLGYIPGIIYALYAIVYVDR 60

Query: 61 DQFFDEYRRPLYSQASAV 79
          DQFFDEYRRPLYSQASAV
Sbjct: 61 DQFFDEYRRPLYSQASAV 78

[Close]

BLAST of Carg11967 vs. ExPASy TrEMBL
Match: A0A6J1G463 (UPF0057 membrane protein At2g24040-like OS=Cucurbita moschata OX=3662 GN=LOC111450578 PE=3 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 9.0e-37
Identity = 78/78 (100.00%), Postives = 78/78 (100.00%), Query Frame = 0


Query: 1  MANGCEICCEILIAILIPPLGVCLKHGCCTVEFCLCLILTLLGYIPGIIYALYAIVYVDR 60
          MANGCEICCEILIAILIPPLGVCLKHGCCTVEFCLCLILTLLGYIPGIIYALYAIVYVDR
Sbjct: 1  MANGCEICCEILIAILIPPLGVCLKHGCCTVEFCLCLILTLLGYIPGIIYALYAIVYVDR 60

Query: 61 DQFFDEYRRPLYSQASAV 79
          DQFFDEYRRPLYSQASAV
Sbjct: 61 DQFFDEYRRPLYSQASAV 78

[Close]

BLAST of Carg11967 vs. ExPASy TrEMBL
Match: A0A6J1DV17 (UPF0057 membrane protein At2g24040-like OS=Momordica charantia OX=3673 GN=LOC111024708 PE=3 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 1.1e-34
Identity = 73/78 (93.59%), Postives = 76/78 (97.44%), Query Frame = 0


Query: 1  MANGCEICCEILIAILIPPLGVCLKHGCCTVEFCLCLILTLLGYIPGIIYALYAIVYVDR 60
          MANGCEICCEILIAILIPPLGVCLKHGCCTVEFCLCLILTLLGY+PGIIYALYAIV+VDR
Sbjct: 1  MANGCEICCEILIAILIPPLGVCLKHGCCTVEFCLCLILTLLGYVPGIIYALYAIVFVDR 60

Query: 61 DQFFDEYRRPLYSQASAV 79
          DQFFDEYRRPLY+  SAV
Sbjct: 61 DQFFDEYRRPLYAPVSAV 78

[Close]

BLAST of Carg11967 vs. ExPASy TrEMBL
Match: A0A5A7UJR3 (UPF0057 membrane protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold323G00760 PE=3 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 7.9e-33
Identity = 70/77 (90.91%), Postives = 73/77 (94.81%), Query Frame = 0


Query: 1  MANGCEICCEILIAILIPPLGVCLKHGCCTVEFCLCLILTLLGYIPGIIYALYAIVYVDR 60
          M NGCEICCEILIAILIPPLGVCLK GCCTVEFCLCLILTLLGY+PGIIYA+YAI +VDR
Sbjct: 1  MVNGCEICCEILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGYVPGIIYAVYAIAFVDR 60

Query: 61 DQFFDEYRRPLYSQASA 78
          DQFFDEYRRPLYS ASA
Sbjct: 61 DQFFDEYRRPLYSSASA 77

[Close]

BLAST of Carg11967 vs. ExPASy TrEMBL
Match: A0A1S3BTY7 (UPF0057 membrane protein At4g30660 OS=Cucumis melo OX=3656 GN=LOC103493660 PE=3 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 7.9e-33
Identity = 70/77 (90.91%), Postives = 73/77 (94.81%), Query Frame = 0


Query: 1  MANGCEICCEILIAILIPPLGVCLKHGCCTVEFCLCLILTLLGYIPGIIYALYAIVYVDR 60
          M NGCEICCEILIAILIPPLGVCLK GCCTVEFCLCLILTLLGY+PGIIYA+YAI +VDR
Sbjct: 1  MVNGCEICCEILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGYVPGIIYAVYAIAFVDR 60

Query: 61 DQFFDEYRRPLYSQASA 78
          DQFFDEYRRPLYS ASA
Sbjct: 61 DQFFDEYRRPLYSSASA 77

[Close]

BLAST of Carg11967 vs. TAIR 10
Match: AT4G28088.1 (Low temperature and salt responsive protein family )

HSP 1 Score: 141.7 bits (356), Expect = 2.4e-34
Identity = 65/72 (90.28%), Postives = 70/72 (97.22%), Query Frame = 0


Query: 1  MANGCEICCEILIAILIPPLGVCLKHGCCTVEFCLCLILTLLGYIPGIIYALYAIVYVDR 60
          MANGCEICCEI+IAILIPPLGVCL+HGCCT EF +CLILTLLGY+PGIIYALYAIVYVDR
Sbjct: 1  MANGCEICCEIMIAILIPPLGVCLRHGCCTTEFMICLILTLLGYVPGIIYALYAIVYVDR 60

Query: 61 DQFFDEYRRPLY 73
          DQFFDEYRRPL+
Sbjct: 61 DQFFDEYRRPLF 72

[Close]

BLAST of Carg11967 vs. TAIR 10
Match: AT2G24040.1 (Low temperature and salt responsive protein family )

HSP 1 Score: 123.2 bits (308), Expect = 8.9e-29
Identity = 53/72 (73.61%), Postives = 66/72 (91.67%), Query Frame = 0


Query: 1  MANGCEICCEILIAILIPPLGVCLKHGCCTVEFCLCLILTLLGYIPGIIYALYAIVYVDR 60
          MA+ CE+CCEI IAIL+PP+GVCL+HGCCTVEF +CLILT LGY+PGIIYA+YAI ++ R
Sbjct: 1  MASSCELCCEIFIAILLPPVGVCLRHGCCTVEFFICLILTCLGYLPGIIYAIYAICFLHR 60

Query: 61 DQFFDEYRRPLY 73
          D++FDEYRRP+Y
Sbjct: 61 DEYFDEYRRPIY 72

[Close]

BLAST of Carg11967 vs. TAIR 10
Match: AT4G30660.1 (Low temperature and salt responsive protein family )

HSP 1 Score: 115.9 bits (289), Expect = 1.4e-26
Identity = 50/73 (68.49%), Postives = 64/73 (87.67%), Query Frame = 0


Query: 1  MANGCEICCEILIAILIPPLGVCLKHGCCTVEFCLCLILTLLGYIPGIIYALYAIVYVDR 60
          M + CEI CEI+IAIL+PPLGVC + GCCTVEF +CL+LT+LGY+PGIIYA+Y IV+  R
Sbjct: 1  MPSNCEILCEIIIAILLPPLGVCFRKGCCTVEFLICLVLTILGYVPGIIYAIYVIVFQHR 60

Query: 61 DQFFDEYRRPLYS 74
          +++FDEYRRP+YS
Sbjct: 61 EEYFDEYRRPIYS 73

[Close]

BLAST of Carg11967 vs. TAIR 10
Match: AT4G30660.2 (Low temperature and salt responsive protein family )

HSP 1 Score: 115.9 bits (289), Expect = 1.4e-26
Identity = 50/73 (68.49%), Postives = 64/73 (87.67%), Query Frame = 0


Query: 1  MANGCEICCEILIAILIPPLGVCLKHGCCTVEFCLCLILTLLGYIPGIIYALYAIVYVDR 60
          M + CEI CEI+IAIL+PPLGVC + GCCTVEF +CL+LT+LGY+PGIIYA+Y IV+  R
Sbjct: 1  MPSNCEILCEIIIAILLPPLGVCFRKGCCTVEFLICLVLTILGYVPGIIYAIYVIVFQHR 60

Query: 61 DQFFDEYRRPLYS 74
          +++FDEYRRP+YS
Sbjct: 61 EEYFDEYRRPIYS 73

[Close]

BLAST of Carg11967 vs. TAIR 10
Match: AT4G30650.1 (Low temperature and salt responsive protein family )

HSP 1 Score: 96.3 bits (238), Expect = 1.2e-20
Identity = 45/61 (73.77%), Postives = 54/61 (88.52%), Query Frame = 0


Query: 1  MANGCEICCEILIAILIPPLGVCLKHGCCTVEFCLCLILTLLGYIPGIIYALYAIVYVDR 60
          MA+  E+ CEILIAIL+PPLGVCLK GCCTVEF +CL+LT+LGYIPGIIYALY IV+ +R
Sbjct: 1  MASNMEVFCEILIAILLPPLGVCLKRGCCTVEFLICLVLTILGYIPGIIYALYVIVFQNR 60

Query: 61 D 62
          +
Sbjct: 61 E 61

The following BLAST results are available for this feature:

BLAST of Carg11967 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022946545.1	1.9e-36	100.00	UPF0057 membrane protein At2g24040-like [Cucurbita moschata] >XP_022999789.1 UPF...	[more]
XP_022158160.1	2.3e-34	93.59	UPF0057 membrane protein At2g24040-like [Momordica charantia]	[more]
XP_038890692.1	1.9e-33	93.59	UPF0057 membrane protein At4g30660-like [Benincasa hispida]	[more]
XP_008452728.1	1.6e-32	90.91	PREDICTED: UPF0057 membrane protein At4g30660 [Cucumis melo] >KAA0056112.1 UPF00...	[more]
XP_011648896.1	4.7e-32	89.61	UPF0057 membrane protein At4g30660 [Cucumis sativus] >KGN61055.1 hypothetical pr...	[more]

BLAST of Carg11967 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O82232	1.3e-27	73.61	UPF0057 membrane protein At2g24040 OS=Arabidopsis thaliana OX=3702 GN=At2g24040 ...	[more]
Q9SUI0	2.0e-25	68.49	UPF0057 membrane protein At4g30660 OS=Arabidopsis thaliana OX=3702 GN=At4g30660 ...	[more]
Q9M095	1.6e-19	73.77	UPF0057 membrane protein At4g30650 OS=Arabidopsis thaliana OX=3702 GN=At4g30650 ...	[more]
Q9LRI7	2.2e-16	60.29	Hydrophobic protein OSR8 OS=Oryza sativa subsp. japonica OX=39947 GN=OSR8 PE=3 S...	[more]
A2Y075	4.1e-10	67.31	Hydrophobic protein LTI6B OS=Oryza sativa subsp. indica OX=39946 GN=LTI6B PE=3 S...	[more]

BLAST of Carg11967 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KI35	9.0e-37	100.00	UPF0057 membrane protein At2g24040-like OS=Cucurbita maxima OX=3661 GN=LOC111494...	[more]
A0A6J1G463	9.0e-37	100.00	UPF0057 membrane protein At2g24040-like OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]
A0A6J1DV17	1.1e-34	93.59	UPF0057 membrane protein At2g24040-like OS=Momordica charantia OX=3673 GN=LOC111...	[more]
A0A5A7UJR3	7.9e-33	90.91	UPF0057 membrane protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffol...	[more]
A0A1S3BTY7	7.9e-33	90.91	UPF0057 membrane protein At4g30660 OS=Cucumis melo OX=3656 GN=LOC103493660 PE=3 ...	[more]

BLAST of Carg11967 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G28088.1	2.4e-34	90.28	Low temperature and salt responsive protein family	[more]
AT2G24040.1	8.9e-29	73.61	Low temperature and salt responsive protein family	[more]
AT4G30660.1	1.4e-26	68.49	Low temperature and salt responsive protein family	[more]
AT4G30660.2	1.4e-26	68.49	Low temperature and salt responsive protein family	[more]
AT4G30650.1	1.2e-20	73.77	Low temperature and salt responsive protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000612	Proteolipid membrane potential modulator	PFAM	PF01679	Pmp3	coord: 8..56 e-value: 1.4E-16 score: 60.4
IPR000612	Proteolipid membrane potential modulator	PANTHER	PTHR21659	HYDROPHOBIC PROTEIN RCI2 LOW TEMPERATURE AND SALT RESPONSIVE PROTEIN LTI6 -RELATED	coord: 1..73
IPR000612	Proteolipid membrane potential modulator	PROSITE	PS01309	UPF0057	coord: 12..27
None	No IPR available	PANTHER	PTHR21659:SF77	BNAC04G36850D PROTEIN	coord: 1..73

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg11967-RA	Carg11967-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane