Carg11958 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg11958
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	GDP-L-fucose synthase
Location	Carg_Chr05: 8770770 .. 8772172 (+)
RNA-Seq Expression	Carg11958
Synteny	Carg11958

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTATTATACGCCCTCACATTTTCTTCCTCCTCTCCCCGGCCGCCGACGATTCTCTCCTCCACGTCCGACGATGGGCGGCGCCGCCGACAACGGTACTCTCTCTATTCACTTGATGTTTATTCGTGTTTCTTAGACACTACTGTAAATCCTTTCTGAAATTTCTCTTTTCTCTTTGAATTTTGCAGCTTCATCAGGATCCTCGTTCCTCTCTGATAAATCGGCGAAGATCTTCGTCGCCGGTCACCGTGGCCTCGTCGGTTCCGCCATTGTCCGTAAGCTCCAGCAGCTTGGATTCACGAATCTCCTTCTTCGTTCTCACTCCGAGCTTGACCTAACTCGCCAATCCGATGTCGAATCGTTCTTCGCTAATGAAAAACCTCGATTCGTTATCCTCGCTGCCGCTAAAGTCGGCGGCATTCACGCCAACAACACCTATCCGGCGGATTTCATCGCCATTAACCTTCAAATCCAGACTAATGTCATCGATTCGGCCTATCGCCATGGTGTTCAGAAGCTATTGTTCCTCGGTTCGTCGTGTATTTATCCGAAATTCGCTCCACAGCCGATTCCCGAAGACGCATTGCTGACCGGTCCTCTGGAGCCGACGAACGAGTGGTACGCGGTGGCGAAGATCGCCGGAATCAAAATGTGTCAGGCGTATCGAATTCAACACAACTGGAATGCGATTTCAGGAATGCCGACAAATCTGTACGGTCCTAACGACAATTTCCACCCGGAGAATTCACACGTCTTGCCGGCGTTGATGAGGAGATTTCACGAGGCGAAGGTGAACGGAGCAAAAGAAGTGGTGGTTTGGGGAAGTGGAAGCCCTCTCAGGGAGTTTCTTCACGTCGATGATTTGGCCGACGCCGTCGCTTTCCTCATGGAGGAATACAGCGATTTAGGCCATGTGAATGTTGGGAGTGGGAAGGAAGTGAGCATCAAAGAGCTAGCTGAATTGGTGAAAGAAGTGGTGGGATTTGAAGGAGATCTTGTTTGGGACAAATCAAAGCCTGATGGGACTCCAAGGAAATTGATGGACAGTTCCAAGCTTGCTGAATTGGGATGGAATCCAAAGATTTCTCTGAAGGATGGCCTTGTGGATACTTACAAATGGTATGTTCAAAATGTGCAGCAATGAAAAAACGAATCAAGAACACAGGTGAGTCCACCCTTTTCAATGATCTGTTTGATCCTTTTGTTGTGATTATAGTTTATAGATCTGTATTACTGAATCAAATTTGCTTAGATCTGAAGCTTTTGCTGCTGCCTGATATATGATTTGATGCCTATAGAGATTGCTATCATATCTTTCTTTGCCAATTATGTTGATCTTCTTACCAGTAGATTGAGCCAGTTTGTATTTCTACAATTGAGAATAAAATTTGCTGATTTGAGAACC

mRNA sequence

TTTATTATACGCCCTCACATTTTCTTCCTCCTCTCCCCGGCCGCCGACGATTCTCTCCTCCACGTCCGACGATGGGCGGCGCCGCCGACAACGCTTCATCAGGATCCTCGTTCCTCTCTGATAAATCGGCGAAGATCTTCGTCGCCGGTCACCGTGGCCTCGTCGGTTCCGCCATTGTCCGTAAGCTCCAGCAGCTTGGATTCACGAATCTCCTTCTTCGTTCTCACTCCGAGCTTGACCTAACTCGCCAATCCGATGTCGAATCGTTCTTCGCTAATGAAAAACCTCGATTCGTTATCCTCGCTGCCGCTAAAGTCGGCGGCATTCACGCCAACAACACCTATCCGGCGGATTTCATCGCCATTAACCTTCAAATCCAGACTAATGTCATCGATTCGGCCTATCGCCATGGTGTTCAGAAGCTATTGTTCCTCGGTTCGTCGTGTATTTATCCGAAATTCGCTCCACAGCCGATTCCCGAAGACGCATTGCTGACCGGTCCTCTGGAGCCGACGAACGAGTGGTACGCGGTGGCGAAGATCGCCGGAATCAAAATGTGTCAGGCGTATCGAATTCAACACAACTGGAATGCGATTTCAGGAATGCCGACAAATCTGTACGGTCCTAACGACAATTTCCACCCGGAGAATTCACACGTCTTGCCGGCGTTGATGAGGAGATTTCACGAGGCGAAGGTGAACGGAGCAAAAGAAGTGGTGGTTTGGGGAAGTGGAAGCCCTCTCAGGGAGTTTCTTCACGTCGATGATTTGGCCGACGCCGTCGCTTTCCTCATGGAGGAATACAGCGATTTAGGCCATGTGAATGTTGGGAGTGGGAAGGAAGTGAGCATCAAAGAGCTAGCTGAATTGGTGAAAGAAGTGGTGGGATTTGAAGGAGATCTTGTTTGGGACAAATCAAAGCCTGATGGGACTCCAAGGAAATTGATGGACAGTTCCAAGCTTGCTGAATTGGGATGGAATCCAAAGATTTCTCTGAAGGATGGCCTTGTGGATACTTACAAATGGTATGTTCAAAATGTGCAGCAATGAAAAAACGAATCAAGAACACAGGTGAGTCCACCCTTTTCAATGATCTGTTTGATCCTTTTGTTGTGATTATAGTTTATAGATCTGTATTACTGAATCAAATTTGCTTAGATCTGAAGCTTTTGCTGCTGCCTGATATATGATTTGATGCCTATAGAGATTGCTATCATATCTTTCTTTGCCAATTATGTTGATCTTCTTACCAGTAGATTGAGCCAGTTTGTATTTCTACAATTGAGAATAAAATTTGCTGATTTGAGAACC

Coding sequence (CDS)

ATGGGCGGCGCCGCCGACAACGCTTCATCAGGATCCTCGTTCCTCTCTGATAAATCGGCGAAGATCTTCGTCGCCGGTCACCGTGGCCTCGTCGGTTCCGCCATTGTCCGTAAGCTCCAGCAGCTTGGATTCACGAATCTCCTTCTTCGTTCTCACTCCGAGCTTGACCTAACTCGCCAATCCGATGTCGAATCGTTCTTCGCTAATGAAAAACCTCGATTCGTTATCCTCGCTGCCGCTAAAGTCGGCGGCATTCACGCCAACAACACCTATCCGGCGGATTTCATCGCCATTAACCTTCAAATCCAGACTAATGTCATCGATTCGGCCTATCGCCATGGTGTTCAGAAGCTATTGTTCCTCGGTTCGTCGTGTATTTATCCGAAATTCGCTCCACAGCCGATTCCCGAAGACGCATTGCTGACCGGTCCTCTGGAGCCGACGAACGAGTGGTACGCGGTGGCGAAGATCGCCGGAATCAAAATGTGTCAGGCGTATCGAATTCAACACAACTGGAATGCGATTTCAGGAATGCCGACAAATCTGTACGGTCCTAACGACAATTTCCACCCGGAGAATTCACACGTCTTGCCGGCGTTGATGAGGAGATTTCACGAGGCGAAGGTGAACGGAGCAAAAGAAGTGGTGGTTTGGGGAAGTGGAAGCCCTCTCAGGGAGTTTCTTCACGTCGATGATTTGGCCGACGCCGTCGCTTTCCTCATGGAGGAATACAGCGATTTAGGCCATGTGAATGTTGGGAGTGGGAAGGAAGTGAGCATCAAAGAGCTAGCTGAATTGGTGAAAGAAGTGGTGGGATTTGAAGGAGATCTTGTTTGGGACAAATCAAAGCCTGATGGGACTCCAAGGAAATTGATGGACAGTTCCAAGCTTGCTGAATTGGGATGGAATCCAAAGATTTCTCTGAAGGATGGCCTTGTGGATACTTACAAATGGTATGTTCAAAATGTGCAGCAATGA

Protein sequence

MGGAADNASSGSSFLSDKSAKIFVAGHRGLVGSAIVRKLQQLGFTNLLLRSHSELDLTRQSDVESFFANEKPRFVILAAAKVGGIHANNTYPADFIAINLQIQTNVIDSAYRHGVQKLLFLGSSCIYPKFAPQPIPEDALLTGPLEPTNEWYAVAKIAGIKMCQAYRIQHNWNAISGMPTNLYGPNDNFHPENSHVLPALMRRFHEAKVNGAKEVVVWGSGSPLREFLHVDDLADAVAFLMEEYSDLGHVNVGSGKEVSIKELAELVKEVVGFEGDLVWDKSKPDGTPRKLMDSSKLAELGWNPKISLKDGLVDTYKWYVQNVQQ

Homology

[Close]

BLAST of Carg11958 vs. NCBI nr
Match: XP_023521193.1 (putative GDP-L-fucose synthase 2 [Cucurbita pepo subsp. pepo] >KAG7030077.1 putative GDP-L-fucose synthase 2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 661.0 bits (1704), Expect = 5.3e-186
Identity = 325/325 (100.00%), Postives = 325/325 (100.00%), Query Frame = 0


Query: 1   MGGAADNASSGSSFLSDKSAKIFVAGHRGLVGSAIVRKLQQLGFTNLLLRSHSELDLTRQ 60
           MGGAADNASSGSSFLSDKSAKIFVAGHRGLVGSAIVRKLQQLGFTNLLLRSHSELDLTRQ
Sbjct: 1   MGGAADNASSGSSFLSDKSAKIFVAGHRGLVGSAIVRKLQQLGFTNLLLRSHSELDLTRQ 60

Query: 61  SDVESFFANEKPRFVILAAAKVGGIHANNTYPADFIAINLQIQTNVIDSAYRHGVQKLLF 120
           SDVESFFANEKPRFVILAAAKVGGIHANNTYPADFIAINLQIQTNVIDSAYRHGVQKLLF
Sbjct: 61  SDVESFFANEKPRFVILAAAKVGGIHANNTYPADFIAINLQIQTNVIDSAYRHGVQKLLF 120

Query: 121 LGSSCIYPKFAPQPIPEDALLTGPLEPTNEWYAVAKIAGIKMCQAYRIQHNWNAISGMPT 180
           LGSSCIYPKFAPQPIPEDALLTGPLEPTNEWYAVAKIAGIKMCQAYRIQHNWNAISGMPT
Sbjct: 121 LGSSCIYPKFAPQPIPEDALLTGPLEPTNEWYAVAKIAGIKMCQAYRIQHNWNAISGMPT 180

Query: 181 NLYGPNDNFHPENSHVLPALMRRFHEAKVNGAKEVVVWGSGSPLREFLHVDDLADAVAFL 240
           NLYGPNDNFHPENSHVLPALMRRFHEAKVNGAKEVVVWGSGSPLREFLHVDDLADAVAFL
Sbjct: 181 NLYGPNDNFHPENSHVLPALMRRFHEAKVNGAKEVVVWGSGSPLREFLHVDDLADAVAFL 240

Query: 241 MEEYSDLGHVNVGSGKEVSIKELAELVKEVVGFEGDLVWDKSKPDGTPRKLMDSSKLAEL 300
           MEEYSDLGHVNVGSGKEVSIKELAELVKEVVGFEGDLVWDKSKPDGTPRKLMDSSKLAEL
Sbjct: 241 MEEYSDLGHVNVGSGKEVSIKELAELVKEVVGFEGDLVWDKSKPDGTPRKLMDSSKLAEL 300

Query: 301 GWNPKISLKDGLVDTYKWYVQNVQQ 326
           GWNPKISLKDGLVDTYKWYVQNVQQ
Sbjct: 301 GWNPKISLKDGLVDTYKWYVQNVQQ 325

[Close]

BLAST of Carg11958 vs. NCBI nr
Match: XP_022946263.1 (putative GDP-L-fucose synthase 2 [Cucurbita moschata])

HSP 1 Score: 659.4 bits (1700), Expect = 1.5e-185
Identity = 324/325 (99.69%), Postives = 324/325 (99.69%), Query Frame = 0


Query: 1   MGGAADNASSGSSFLSDKSAKIFVAGHRGLVGSAIVRKLQQLGFTNLLLRSHSELDLTRQ 60
           MGGAADN SSGSSFLSDKSAKIFVAGHRGLVGSAIVRKLQQLGFTNLLLRSHSELDLTRQ
Sbjct: 1   MGGAADNVSSGSSFLSDKSAKIFVAGHRGLVGSAIVRKLQQLGFTNLLLRSHSELDLTRQ 60

Query: 61  SDVESFFANEKPRFVILAAAKVGGIHANNTYPADFIAINLQIQTNVIDSAYRHGVQKLLF 120
           SDVESFFANEKPRFVILAAAKVGGIHANNTYPADFIAINLQIQTNVIDSAYRHGVQKLLF
Sbjct: 61  SDVESFFANEKPRFVILAAAKVGGIHANNTYPADFIAINLQIQTNVIDSAYRHGVQKLLF 120

Query: 121 LGSSCIYPKFAPQPIPEDALLTGPLEPTNEWYAVAKIAGIKMCQAYRIQHNWNAISGMPT 180
           LGSSCIYPKFAPQPIPEDALLTGPLEPTNEWYAVAKIAGIKMCQAYRIQHNWNAISGMPT
Sbjct: 121 LGSSCIYPKFAPQPIPEDALLTGPLEPTNEWYAVAKIAGIKMCQAYRIQHNWNAISGMPT 180

Query: 181 NLYGPNDNFHPENSHVLPALMRRFHEAKVNGAKEVVVWGSGSPLREFLHVDDLADAVAFL 240
           NLYGPNDNFHPENSHVLPALMRRFHEAKVNGAKEVVVWGSGSPLREFLHVDDLADAVAFL
Sbjct: 181 NLYGPNDNFHPENSHVLPALMRRFHEAKVNGAKEVVVWGSGSPLREFLHVDDLADAVAFL 240

Query: 241 MEEYSDLGHVNVGSGKEVSIKELAELVKEVVGFEGDLVWDKSKPDGTPRKLMDSSKLAEL 300
           MEEYSDLGHVNVGSGKEVSIKELAELVKEVVGFEGDLVWDKSKPDGTPRKLMDSSKLAEL
Sbjct: 241 MEEYSDLGHVNVGSGKEVSIKELAELVKEVVGFEGDLVWDKSKPDGTPRKLMDSSKLAEL 300

Query: 301 GWNPKISLKDGLVDTYKWYVQNVQQ 326
           GWNPKISLKDGLVDTYKWYVQNVQQ
Sbjct: 301 GWNPKISLKDGLVDTYKWYVQNVQQ 325

[Close]

BLAST of Carg11958 vs. NCBI nr
Match: XP_022999738.1 (putative GDP-L-fucose synthase 2 [Cucurbita maxima])

HSP 1 Score: 656.8 bits (1693), Expect = 1.0e-184
Identity = 321/325 (98.77%), Postives = 324/325 (99.69%), Query Frame = 0


Query: 1   MGGAADNASSGSSFLSDKSAKIFVAGHRGLVGSAIVRKLQQLGFTNLLLRSHSELDLTRQ 60
           MGGAADNASSGSSFLSDKSAKIF+AGHRGLVGSAIVRKLQQLGFTNLLLRSHSELDLTRQ
Sbjct: 1   MGGAADNASSGSSFLSDKSAKIFIAGHRGLVGSAIVRKLQQLGFTNLLLRSHSELDLTRQ 60

Query: 61  SDVESFFANEKPRFVILAAAKVGGIHANNTYPADFIAINLQIQTNVIDSAYRHGVQKLLF 120
           SDVESFFANEKPRF ILAAAKVGGIHANNTYPADFIAINLQIQTNVIDSAYRHGVQKLLF
Sbjct: 61  SDVESFFANEKPRFAILAAAKVGGIHANNTYPADFIAINLQIQTNVIDSAYRHGVQKLLF 120

Query: 121 LGSSCIYPKFAPQPIPEDALLTGPLEPTNEWYAVAKIAGIKMCQAYRIQHNWNAISGMPT 180
           LGSSCIYPKFAPQPIPEDALLTGPLEPTNEWYAVAKIAGIKMCQAYRIQHNWNAISGMPT
Sbjct: 121 LGSSCIYPKFAPQPIPEDALLTGPLEPTNEWYAVAKIAGIKMCQAYRIQHNWNAISGMPT 180

Query: 181 NLYGPNDNFHPENSHVLPALMRRFHEAKVNGAKEVVVWGSGSPLREFLHVDDLADAVAFL 240
           NLYGPNDNFHPENSHVLPALMRRFHEAKVNGAKEVVVWGSGSPLREFLHVDDLADAVAFL
Sbjct: 181 NLYGPNDNFHPENSHVLPALMRRFHEAKVNGAKEVVVWGSGSPLREFLHVDDLADAVAFL 240

Query: 241 MEEYSDLGHVNVGSGKEVSIKELAELVKEVVGFEGDLVWDKSKPDGTPRKLMDSSKLAEL 300
           MEEYSDLGHVNVGSGKEVSIKELAELVKEVVGFEGDLVWDKSKPDGTPRKLMDSSKLAEL
Sbjct: 241 MEEYSDLGHVNVGSGKEVSIKELAELVKEVVGFEGDLVWDKSKPDGTPRKLMDSSKLAEL 300

Query: 301 GWNPKISLKDGLVDTYKWYVQNVQQ 326
           GWNP+ISL+DGLVDTYKWYVQNVQQ
Sbjct: 301 GWNPRISLRDGLVDTYKWYVQNVQQ 325

[Close]

BLAST of Carg11958 vs. NCBI nr
Match: XP_038889124.1 (putative GDP-L-fucose synthase 2 [Benincasa hispida])

HSP 1 Score: 644.8 bits (1662), Expect = 3.9e-181
Identity = 316/325 (97.23%), Postives = 322/325 (99.08%), Query Frame = 0


Query: 1   MGGAADNASSGSSFLSDKSAKIFVAGHRGLVGSAIVRKLQQLGFTNLLLRSHSELDLTRQ 60
           MGGAADNASS SSFL DKSAKIFVAGHRGLVGSAIVRKLQQLGFTNLLLRSH+ELDLTRQ
Sbjct: 1   MGGAADNASSRSSFLFDKSAKIFVAGHRGLVGSAIVRKLQQLGFTNLLLRSHTELDLTRQ 60

Query: 61  SDVESFFANEKPRFVILAAAKVGGIHANNTYPADFIAINLQIQTNVIDSAYRHGVQKLLF 120
           SDVE+FFANEKPRFVILAAAKVGGIHANNTYPADFIAINLQIQTNVIDSAYR+GV+KLLF
Sbjct: 61  SDVEAFFANEKPRFVILAAAKVGGIHANNTYPADFIAINLQIQTNVIDSAYRYGVEKLLF 120

Query: 121 LGSSCIYPKFAPQPIPEDALLTGPLEPTNEWYAVAKIAGIKMCQAYRIQHNWNAISGMPT 180
           LGSSCIYPKFAPQPIPEDALLTGPLEPTNEWYAVAKIAGIKMCQAYRIQ+NWNAISGMPT
Sbjct: 121 LGSSCIYPKFAPQPIPEDALLTGPLEPTNEWYAVAKIAGIKMCQAYRIQYNWNAISGMPT 180

Query: 181 NLYGPNDNFHPENSHVLPALMRRFHEAKVNGAKEVVVWGSGSPLREFLHVDDLADAVAFL 240
           NLYGPNDNFHPENSHVLPALMRRFHEAKVNGAKEVVVWGSGSPLREFLHVDDLADAV FL
Sbjct: 181 NLYGPNDNFHPENSHVLPALMRRFHEAKVNGAKEVVVWGSGSPLREFLHVDDLADAVVFL 240

Query: 241 MEEYSDLGHVNVGSGKEVSIKELAELVKEVVGFEGDLVWDKSKPDGTPRKLMDSSKLAEL 300
           MEEYSDLGH+NVGSGKEVSIKELAELVKEVVGFEGDLVWDKSKPDGTPRKLMDSSKLAEL
Sbjct: 241 MEEYSDLGHLNVGSGKEVSIKELAELVKEVVGFEGDLVWDKSKPDGTPRKLMDSSKLAEL 300

Query: 301 GWNPKISLKDGLVDTYKWYVQNVQQ 326
           GWNPKISLKDGLVDTYKWYVQNVQQ
Sbjct: 301 GWNPKISLKDGLVDTYKWYVQNVQQ 325

[Close]

BLAST of Carg11958 vs. NCBI nr
Match: XP_008452484.1 (PREDICTED: putative GDP-L-fucose synthase 2 [Cucumis melo] >XP_016902552.1 PREDICTED: putative GDP-L-fucose synthase 2 [Cucumis melo])

HSP 1 Score: 643.7 bits (1659), Expect = 8.8e-181
Identity = 316/325 (97.23%), Postives = 321/325 (98.77%), Query Frame = 0


Query: 1   MGGAADNASSGSSFLSDKSAKIFVAGHRGLVGSAIVRKLQQLGFTNLLLRSHSELDLTRQ 60
           MGGAADNASSGSSFL DKSAKIFVAGHRGLVGSAIVRKLQQLGFTNLLLRSHSELDLTRQ
Sbjct: 1   MGGAADNASSGSSFLFDKSAKIFVAGHRGLVGSAIVRKLQQLGFTNLLLRSHSELDLTRQ 60

Query: 61  SDVESFFANEKPRFVILAAAKVGGIHANNTYPADFIAINLQIQTNVIDSAYRHGVQKLLF 120
           SDVESFFANEKPRFVILAAAKVGGIHANNTYPADFIAINLQIQTNVIDSAYR+GV+KLLF
Sbjct: 61  SDVESFFANEKPRFVILAAAKVGGIHANNTYPADFIAINLQIQTNVIDSAYRYGVEKLLF 120

Query: 121 LGSSCIYPKFAPQPIPEDALLTGPLEPTNEWYAVAKIAGIKMCQAYRIQHNWNAISGMPT 180
           LGSSCIYPKFAPQPIPEDALLTGPLEPTNEWYAVAKIAGIKMCQAYRIQ+ W+AISGMPT
Sbjct: 121 LGSSCIYPKFAPQPIPEDALLTGPLEPTNEWYAVAKIAGIKMCQAYRIQYKWDAISGMPT 180

Query: 181 NLYGPNDNFHPENSHVLPALMRRFHEAKVNGAKEVVVWGSGSPLREFLHVDDLADAVAFL 240
           NLYGPNDNFHPENSHVLPALMRRFHEAKV GAKEVVVWGSGSPLREFLHVDDLADAV FL
Sbjct: 181 NLYGPNDNFHPENSHVLPALMRRFHEAKVKGAKEVVVWGSGSPLREFLHVDDLADAVVFL 240

Query: 241 MEEYSDLGHVNVGSGKEVSIKELAELVKEVVGFEGDLVWDKSKPDGTPRKLMDSSKLAEL 300
           MEEYSDLGH+NVGSGKEVSIKELAELVKEVVGFEGDLVWDKSKPDGTPRKLMDSSKLAEL
Sbjct: 241 MEEYSDLGHLNVGSGKEVSIKELAELVKEVVGFEGDLVWDKSKPDGTPRKLMDSSKLAEL 300

Query: 301 GWNPKISLKDGLVDTYKWYVQNVQQ 326
           GWNPKISLKDGLVDTYKWYVQNVQQ
Sbjct: 301 GWNPKISLKDGLVDTYKWYVQNVQQ 325

[Close]

BLAST of Carg11958 vs. ExPASy Swiss-Prot
Match: Q9LMU0 (Putative GDP-L-fucose synthase 2 OS=Arabidopsis thaliana OX=3702 GN=GER2 PE=1 SV=1)

HSP 1 Score: 555.8 bits (1431), Expect = 3.2e-157
Identity = 271/324 (83.64%), Postives = 289/324 (89.20%), Query Frame = 0


Query: 5   ADNASS---GSSFLSDKSAKIFVAGHRGLVGSAIVRKLQQLGFTNLLLRSHSELDLTRQS 64
           ADN  S     SF+ +KSAKIFVAGHRGLVGSAIVRKLQ  GFTNL+LR+HSELDLT QS
Sbjct: 2   ADNTGSEMKSGSFMLEKSAKIFVAGHRGLVGSAIVRKLQDQGFTNLVLRTHSELDLTSQS 61

Query: 65  DVESFFANEKPRFVILAAAKVGGIHANNTYPADFIAINLQIQTNVIDSAYRHGVQKLLFL 124
           DVESFFA EKP +VILAAAKVGGIHANNTYPADFI +NLQIQTNVI SAY HGV+KLLFL
Sbjct: 62  DVESFFATEKPVYVILAAAKVGGIHANNTYPADFIGVNLQIQTNVIHSAYTHGVKKLLFL 121

Query: 125 GSSCIYPKFAPQPIPEDALLTGPLEPTNEWYAVAKIAGIKMCQAYRIQHNWNAISGMPTN 184
           GSSCIYPKFAPQPIPE ALLTGPLEPTNEWYA+AKIAGIKMCQAYR+QH W+AISGMPTN
Sbjct: 122 GSSCIYPKFAPQPIPESALLTGPLEPTNEWYAIAKIAGIKMCQAYRLQHQWDAISGMPTN 181

Query: 185 LYGPNDNFHPENSHVLPALMRRFHEAKVNGAKEVVVWGSGSPLREFLHVDDLADAVAFLM 244
           LYG NDNFHPENSHVLPALMRRFHEAK N A EVVVWGSGSPLREFLHVDDLADA  FLM
Sbjct: 182 LYGQNDNFHPENSHVLPALMRRFHEAKANNADEVVVWGSGSPLREFLHVDDLADACVFLM 241

Query: 245 EEYSDLGHVNVGSGKEVSIKELAELVKEVVGFEGDLVWDKSKPDGTPRKLMDSSKLAELG 304
           ++YS   HVNVGSG EV+IKELAELVKEVVGF+G LVWD +KPDGTPRKLMDSSKLA LG
Sbjct: 242 DQYSGFEHVNVGSGVEVTIKELAELVKEVVGFKGKLVWDTTKPDGTPRKLMDSSKLASLG 301

Query: 305 WNPKISLKDGLVDTYKWYVQNVQQ 326
           W PKISLKDGL  TY+WY++NV Q
Sbjct: 302 WTPKISLKDGLSQTYEWYLENVVQ 325

[Close]

BLAST of Carg11958 vs. ExPASy Swiss-Prot
Match: O49213 (GDP-L-fucose synthase 1 OS=Arabidopsis thaliana OX=3702 GN=GER1 PE=1 SV=3)

HSP 1 Score: 548.5 bits (1412), Expect = 5.0e-155
Identity = 262/319 (82.13%), Postives = 289/319 (90.60%), Query Frame = 0


Query: 5   ADNASSGSSFLSDKSAKIFVAGHRGLVGSAIVRKLQQLGFTNLLLRSHSELDLTRQSDVE 64
           A+   S  S +SDKSAKIFVAGHRGLVGSAIVRKLQ+ GFTNL+L++H+ELDLTRQ+DVE
Sbjct: 2   AETIGSEVSSMSDKSAKIFVAGHRGLVGSAIVRKLQEQGFTNLVLKTHAELDLTRQADVE 61

Query: 65  SFFANEKPRFVILAAAKVGGIHANNTYPADFIAINLQIQTNVIDSAYRHGVQKLLFLGSS 124
           SFF+ EKP +VILAAAKVGGIHANNTYPADFI +NLQIQTNVI SAY HGV+KLLFLGSS
Sbjct: 62  SFFSQEKPVYVILAAAKVGGIHANNTYPADFIGVNLQIQTNVIHSAYEHGVKKLLFLGSS 121

Query: 125 CIYPKFAPQPIPEDALLTGPLEPTNEWYAVAKIAGIKMCQAYRIQHNWNAISGMPTNLYG 184
           CIYPKFAPQPIPE ALLT  LEPTNEWYA+AKIAGIK CQAYRIQH W+AISGMPTNLYG
Sbjct: 122 CIYPKFAPQPIPESALLTASLEPTNEWYAIAKIAGIKTCQAYRIQHGWDAISGMPTNLYG 181

Query: 185 PNDNFHPENSHVLPALMRRFHEAKVNGAKEVVVWGSGSPLREFLHVDDLADAVAFLMEEY 244
           PNDNFHPENSHVLPALMRRFHEAKVNGA+EVVVWG+GSPLREFLHVDDLADA  FL++ Y
Sbjct: 182 PNDNFHPENSHVLPALMRRFHEAKVNGAEEVVVWGTGSPLREFLHVDDLADACVFLLDRY 241

Query: 245 SDLGHVNVGSGKEVSIKELAELVKEVVGFEGDLVWDKSKPDGTPRKLMDSSKLAELGWNP 304
           S L HVN+GSG+EV+I+ELAELVKEVVGFEG L WD +KPDGTPRKLMDSSKLA LGW P
Sbjct: 242 SGLEHVNIGSGQEVTIRELAELVKEVVGFEGKLGWDCTKPDGTPRKLMDSSKLASLGWTP 301

Query: 305 KISLKDGLVDTYKWYVQNV 324
           K+SL+DGL  TY WY++NV
Sbjct: 302 KVSLRDGLSQTYDWYLKNV 320

[Close]

BLAST of Carg11958 vs. ExPASy Swiss-Prot
Match: Q67WR2 (Probable GDP-L-fucose synthase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os06g0652400 PE=2 SV=1)

HSP 1 Score: 528.9 bits (1361), Expect = 4.1e-149
Identity = 253/322 (78.57%), Postives = 288/322 (89.44%), Query Frame = 0


Query: 3   GAADNASSGSSFLSDKSAKIFVAGHRGLVGSAIVRKLQQLGFTNLLLRSHSELDLTRQSD 62
           G    A   +SFL+DK  K+FVAGHRGLVGSAI+R L  LGFTN+++R+H+ELDLTRQSD
Sbjct: 2   GTVTTADPHASFLADKGGKVFVAGHRGLVGSAILRHLVSLGFTNVVVRTHAELDLTRQSD 61

Query: 63  VESFFANEKPRFVILAAAKVGGIHANNTYPADFIAINLQIQTNVIDSAYRHG-VQKLLFL 122
           VE+FFA E PR+V+LAAAKVGGIHAN+T+PADFIA NLQIQTNV+D+A + G V+KLLFL
Sbjct: 62  VEAFFAAELPRYVVLAAAKVGGIHANSTFPADFIAANLQIQTNVVDAALKCGSVRKLLFL 121

Query: 123 GSSCIYPKFAPQPIPEDALLTGPLEPTNEWYAVAKIAGIKMCQAYRIQHNWNAISGMPTN 182
           GSSCIYPKFAPQPIPE++LL+GPLEPTNEWYAVAKIAGIKMCQAYRIQH ++AIS MPTN
Sbjct: 122 GSSCIYPKFAPQPIPENSLLSGPLEPTNEWYAVAKIAGIKMCQAYRIQHGFDAISAMPTN 181

Query: 183 LYGPNDNFHPENSHVLPALMRRFHEAKVNGAKEVVVWGSGSPLREFLHVDDLADAVAFLM 242
           LYGP DNFHPENSHVLPAL+RRFHEAK + A EVVVWG+GSPLREFLHVDDLADAV FLM
Sbjct: 182 LYGPQDNFHPENSHVLPALIRRFHEAKASNAAEVVVWGTGSPLREFLHVDDLADAVIFLM 241

Query: 243 EEYSDLGHVNVGSGKEVSIKELAELVKEVVGFEGDLVWDKSKPDGTPRKLMDSSKLAELG 302
           + YS L HVNVGSG EV+IKELAELVKEVVGF+G LVWD SKPDGTPRKLMDSSK+ E+G
Sbjct: 242 DHYSGLEHVNVGSGSEVTIKELAELVKEVVGFQGKLVWDSSKPDGTPRKLMDSSKIQEMG 301

Query: 303 WNPKISLKDGLVDTYKWYVQNV 324
           W PK+ LK+GLV+TYKWYV+NV
Sbjct: 302 WKPKVPLKEGLVETYKWYVENV 323

[Close]

BLAST of Carg11958 vs. ExPASy Swiss-Prot
Match: Q67WR5 (Putative GDP-L-fucose synthase 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os06g0652300 PE=3 SV=1)

HSP 1 Score: 390.6 bits (1002), Expect = 1.8e-107
Identity = 185/318 (58.18%), Postives = 247/318 (77.67%), Query Frame = 0


Query: 6   DNASSGSSFLSDKSAKIFVAGHRGLVGSAIVRKLQQLGFTNLLLRSHSELDLTRQSDVES 65
           D  ++  SFL DKSAK+F+AGHRG+VGSA+ RKL  LGFTN+++R+ +ELDL  Q+ VE+
Sbjct: 21  DGDAAAVSFLGDKSAKVFIAGHRGMVGSAVHRKLDALGFTNVVVRTRAELDLACQAAVEA 80

Query: 66  FFANEKPRFVILAAAKVGGIHANNTYPADFIAINLQIQTNVIDSAYRHG-VQKLLFLGSS 125
           FFA E PR+VILAAAKVGG+HA++  PA+++  NL+I  NV+D+A R G V+KLL L SS
Sbjct: 81  FFAAELPRYVILAAAKVGGVHASSAAPAEYLTENLRITVNVVDAARRCGSVRKLLVLASS 140

Query: 126 CIYPKFAPQPIPEDALLTGPLEPTNEWYAVAKIAGIKMCQAYRIQHNWNAISGMPTNLYG 185
            IYP  APQP PE ALLTGP    +EWYA+ KIAGIKMCQA R ++  +AI+  P NLYG
Sbjct: 141 TIYPADAPQPTPESALLTGPPAEGSEWYAIPKIAGIKMCQAVRAEYGLDAIAAAPNNLYG 200

Query: 186 PNDNFHPENSHVLPALMRRFHEAKVNGAKEVVVWGSGSPLREFLHVDDLADAVAFLMEEY 245
           P   F PE+SHV+PAL+RRFH AK+ GA EV VWGSG+  REF HVDDLA+AV  LME Y
Sbjct: 201 PRHPFPPEHSHVIPALIRRFHRAKLEGAGEVAVWGSGAAAREFTHVDDLAEAVVVLMERY 260

Query: 246 SDLGHVNVGSGKEVSIKELAELVKEVVGFEGDLVWDKSKPDGTPRKLMDSSKLAELGWNP 305
           S   HVNVGSG+EV+++ELAE V+ VVG+EG + WD ++P+G  R+++DS ++ +LGW P
Sbjct: 261 SGEEHVNVGSGEEVTVRELAEAVRGVVGYEGVVAWDAARPEGVARRVVDSGRMRKLGWEP 320

Query: 306 KISLKDGLVDTYKWYVQN 323
           +++L+DG+ D Y++Y+++
Sbjct: 321 RVALRDGIQDLYRFYLRH 338

[Close]

BLAST of Carg11958 vs. ExPASy Swiss-Prot
Match: P55353 (GDP-L-fucose synthase OS=Sinorhizobium fredii (strain NBRC 101917 / NGR234) OX=394 GN=fcl PE=3 SV=1)

HSP 1 Score: 377.9 bits (969), Expect = 1.2e-103
Identity = 180/303 (59.41%), Postives = 233/303 (76.90%), Query Frame = 0


Query: 21  KIFVAGHRGLVGSAIVRKLQQLGFTNLLLRSHSELDLTRQSDVESFFANEKPRFVILAAA 80
           +I+VAGH+G+VGSAI+R L       +++    +LDLTRQ +VE F   EKP  VI+AAA
Sbjct: 10  RIWVAGHKGMVGSAIIRSLASED-CEVIVADRQKLDLTRQEEVEKFLLKEKPHAVIMAAA 69

Query: 81  KVGGIHANNTYPADFIAINLQIQTNVIDSAYRHGVQKLLFLGSSCIYPKFAPQPIPEDAL 140
           KVGGI AN+T PADFI  NL ++ NVI+ ++R GV+KLLFLGSSCIYPK+A QPI E+AL
Sbjct: 70  KVGGILANDTMPADFIYQNLIMEANVIEGSFRSGVEKLLFLGSSCIYPKYAAQPIREEAL 129

Query: 141 LTGPLEPTNEWYAVAKIAGIKMCQAYRIQHNWNAISGMPTNLYGPNDNFHPENSHVLPAL 200
           LTGPLEPTNEWYA+AKIAGIK+CQAYR Q+  N IS MPTNLYGP D F   +SHV+PAL
Sbjct: 130 LTGPLEPTNEWYAIAKIAGIKLCQAYRKQYGANFISAMPTNLYGPRDKFDLNSSHVVPAL 189

Query: 201 MRRFHEAKVNGAKEVVVWGSGSPLREFLHVDDLADAVAFLMEEYSDLGHVNVGSGKEVSI 260
           +R+ HEAK+     + +WGSG+P R+FL+ +D +DA+ FL++ YS+  H+N+GSG E+SI
Sbjct: 190 IRKAHEAKIKDLGCLSIWGSGTPTRDFLYSEDCSDALVFLLKHYSETEHINIGSGGEISI 249

Query: 261 KELAELVKEVVGFEGDLVWDKSKPDGTPRKLMDSSKLAELGWNPKISLKDGLVDTYKWYV 320
            ELA +V  VVGF+GD+V+D SKPDGTPRKL+ S +L  +GW PK SL+ GL  +Y+ +V
Sbjct: 250 IELAHIVCRVVGFKGDIVFDTSKPDGTPRKLLSSERLVSMGWRPKTSLELGLAKSYESFV 309

Query: 321 QNV 324
            NV
Sbjct: 310 SNV 311

[Close]

BLAST of Carg11958 vs. ExPASy TrEMBL
Match: A0A6J1G3B1 (GDP-L-fucose synthase OS=Cucurbita moschata OX=3662 GN=LOC111450399 PE=3 SV=1)

HSP 1 Score: 659.4 bits (1700), Expect = 7.5e-186
Identity = 324/325 (99.69%), Postives = 324/325 (99.69%), Query Frame = 0


Query: 1   MGGAADNASSGSSFLSDKSAKIFVAGHRGLVGSAIVRKLQQLGFTNLLLRSHSELDLTRQ 60
           MGGAADN SSGSSFLSDKSAKIFVAGHRGLVGSAIVRKLQQLGFTNLLLRSHSELDLTRQ
Sbjct: 1   MGGAADNVSSGSSFLSDKSAKIFVAGHRGLVGSAIVRKLQQLGFTNLLLRSHSELDLTRQ 60

Query: 61  SDVESFFANEKPRFVILAAAKVGGIHANNTYPADFIAINLQIQTNVIDSAYRHGVQKLLF 120
           SDVESFFANEKPRFVILAAAKVGGIHANNTYPADFIAINLQIQTNVIDSAYRHGVQKLLF
Sbjct: 61  SDVESFFANEKPRFVILAAAKVGGIHANNTYPADFIAINLQIQTNVIDSAYRHGVQKLLF 120

Query: 121 LGSSCIYPKFAPQPIPEDALLTGPLEPTNEWYAVAKIAGIKMCQAYRIQHNWNAISGMPT 180
           LGSSCIYPKFAPQPIPEDALLTGPLEPTNEWYAVAKIAGIKMCQAYRIQHNWNAISGMPT
Sbjct: 121 LGSSCIYPKFAPQPIPEDALLTGPLEPTNEWYAVAKIAGIKMCQAYRIQHNWNAISGMPT 180

Query: 181 NLYGPNDNFHPENSHVLPALMRRFHEAKVNGAKEVVVWGSGSPLREFLHVDDLADAVAFL 240
           NLYGPNDNFHPENSHVLPALMRRFHEAKVNGAKEVVVWGSGSPLREFLHVDDLADAVAFL
Sbjct: 181 NLYGPNDNFHPENSHVLPALMRRFHEAKVNGAKEVVVWGSGSPLREFLHVDDLADAVAFL 240

Query: 241 MEEYSDLGHVNVGSGKEVSIKELAELVKEVVGFEGDLVWDKSKPDGTPRKLMDSSKLAEL 300
           MEEYSDLGHVNVGSGKEVSIKELAELVKEVVGFEGDLVWDKSKPDGTPRKLMDSSKLAEL
Sbjct: 241 MEEYSDLGHVNVGSGKEVSIKELAELVKEVVGFEGDLVWDKSKPDGTPRKLMDSSKLAEL 300

Query: 301 GWNPKISLKDGLVDTYKWYVQNVQQ 326
           GWNPKISLKDGLVDTYKWYVQNVQQ
Sbjct: 301 GWNPKISLKDGLVDTYKWYVQNVQQ 325

[Close]

BLAST of Carg11958 vs. ExPASy TrEMBL
Match: A0A6J1KKK7 (GDP-L-fucose synthase OS=Cucurbita maxima OX=3661 GN=LOC111493996 PE=3 SV=1)

HSP 1 Score: 656.8 bits (1693), Expect = 4.9e-185
Identity = 321/325 (98.77%), Postives = 324/325 (99.69%), Query Frame = 0


Query: 1   MGGAADNASSGSSFLSDKSAKIFVAGHRGLVGSAIVRKLQQLGFTNLLLRSHSELDLTRQ 60
           MGGAADNASSGSSFLSDKSAKIF+AGHRGLVGSAIVRKLQQLGFTNLLLRSHSELDLTRQ
Sbjct: 1   MGGAADNASSGSSFLSDKSAKIFIAGHRGLVGSAIVRKLQQLGFTNLLLRSHSELDLTRQ 60

Query: 61  SDVESFFANEKPRFVILAAAKVGGIHANNTYPADFIAINLQIQTNVIDSAYRHGVQKLLF 120
           SDVESFFANEKPRF ILAAAKVGGIHANNTYPADFIAINLQIQTNVIDSAYRHGVQKLLF
Sbjct: 61  SDVESFFANEKPRFAILAAAKVGGIHANNTYPADFIAINLQIQTNVIDSAYRHGVQKLLF 120

Query: 121 LGSSCIYPKFAPQPIPEDALLTGPLEPTNEWYAVAKIAGIKMCQAYRIQHNWNAISGMPT 180
           LGSSCIYPKFAPQPIPEDALLTGPLEPTNEWYAVAKIAGIKMCQAYRIQHNWNAISGMPT
Sbjct: 121 LGSSCIYPKFAPQPIPEDALLTGPLEPTNEWYAVAKIAGIKMCQAYRIQHNWNAISGMPT 180

Query: 181 NLYGPNDNFHPENSHVLPALMRRFHEAKVNGAKEVVVWGSGSPLREFLHVDDLADAVAFL 240
           NLYGPNDNFHPENSHVLPALMRRFHEAKVNGAKEVVVWGSGSPLREFLHVDDLADAVAFL
Sbjct: 181 NLYGPNDNFHPENSHVLPALMRRFHEAKVNGAKEVVVWGSGSPLREFLHVDDLADAVAFL 240

Query: 241 MEEYSDLGHVNVGSGKEVSIKELAELVKEVVGFEGDLVWDKSKPDGTPRKLMDSSKLAEL 300
           MEEYSDLGHVNVGSGKEVSIKELAELVKEVVGFEGDLVWDKSKPDGTPRKLMDSSKLAEL
Sbjct: 241 MEEYSDLGHVNVGSGKEVSIKELAELVKEVVGFEGDLVWDKSKPDGTPRKLMDSSKLAEL 300

Query: 301 GWNPKISLKDGLVDTYKWYVQNVQQ 326
           GWNP+ISL+DGLVDTYKWYVQNVQQ
Sbjct: 301 GWNPRISLRDGLVDTYKWYVQNVQQ 325

[Close]

BLAST of Carg11958 vs. ExPASy TrEMBL
Match: A0A1S3BTW0 (GDP-L-fucose synthase OS=Cucumis melo OX=3656 GN=LOC103493500 PE=3 SV=1)

HSP 1 Score: 643.7 bits (1659), Expect = 4.3e-181
Identity = 316/325 (97.23%), Postives = 321/325 (98.77%), Query Frame = 0


Query: 1   MGGAADNASSGSSFLSDKSAKIFVAGHRGLVGSAIVRKLQQLGFTNLLLRSHSELDLTRQ 60
           MGGAADNASSGSSFL DKSAKIFVAGHRGLVGSAIVRKLQQLGFTNLLLRSHSELDLTRQ
Sbjct: 1   MGGAADNASSGSSFLFDKSAKIFVAGHRGLVGSAIVRKLQQLGFTNLLLRSHSELDLTRQ 60

Query: 61  SDVESFFANEKPRFVILAAAKVGGIHANNTYPADFIAINLQIQTNVIDSAYRHGVQKLLF 120
           SDVESFFANEKPRFVILAAAKVGGIHANNTYPADFIAINLQIQTNVIDSAYR+GV+KLLF
Sbjct: 61  SDVESFFANEKPRFVILAAAKVGGIHANNTYPADFIAINLQIQTNVIDSAYRYGVEKLLF 120

Query: 121 LGSSCIYPKFAPQPIPEDALLTGPLEPTNEWYAVAKIAGIKMCQAYRIQHNWNAISGMPT 180
           LGSSCIYPKFAPQPIPEDALLTGPLEPTNEWYAVAKIAGIKMCQAYRIQ+ W+AISGMPT
Sbjct: 121 LGSSCIYPKFAPQPIPEDALLTGPLEPTNEWYAVAKIAGIKMCQAYRIQYKWDAISGMPT 180

Query: 181 NLYGPNDNFHPENSHVLPALMRRFHEAKVNGAKEVVVWGSGSPLREFLHVDDLADAVAFL 240
           NLYGPNDNFHPENSHVLPALMRRFHEAKV GAKEVVVWGSGSPLREFLHVDDLADAV FL
Sbjct: 181 NLYGPNDNFHPENSHVLPALMRRFHEAKVKGAKEVVVWGSGSPLREFLHVDDLADAVVFL 240

Query: 241 MEEYSDLGHVNVGSGKEVSIKELAELVKEVVGFEGDLVWDKSKPDGTPRKLMDSSKLAEL 300
           MEEYSDLGH+NVGSGKEVSIKELAELVKEVVGFEGDLVWDKSKPDGTPRKLMDSSKLAEL
Sbjct: 241 MEEYSDLGHLNVGSGKEVSIKELAELVKEVVGFEGDLVWDKSKPDGTPRKLMDSSKLAEL 300

Query: 301 GWNPKISLKDGLVDTYKWYVQNVQQ 326
           GWNPKISLKDGLVDTYKWYVQNVQQ
Sbjct: 301 GWNPKISLKDGLVDTYKWYVQNVQQ 325

[Close]

BLAST of Carg11958 vs. ExPASy TrEMBL
Match: A0A0A0LH41 (GDP-L-fucose synthase OS=Cucumis sativus OX=3659 GN=Csa_2G036660 PE=3 SV=1)

HSP 1 Score: 642.9 bits (1657), Expect = 7.3e-181
Identity = 315/325 (96.92%), Postives = 321/325 (98.77%), Query Frame = 0


Query: 1   MGGAADNASSGSSFLSDKSAKIFVAGHRGLVGSAIVRKLQQLGFTNLLLRSHSELDLTRQ 60
           MGGAADNASSGSSFL DKSAKIFVAGHRGLVGSAIVRKLQQLGFTNL+LRSHSELDLTRQ
Sbjct: 1   MGGAADNASSGSSFLFDKSAKIFVAGHRGLVGSAIVRKLQQLGFTNLILRSHSELDLTRQ 60

Query: 61  SDVESFFANEKPRFVILAAAKVGGIHANNTYPADFIAINLQIQTNVIDSAYRHGVQKLLF 120
           SDVESFFANEKPRFVILAAAKVGGIHANNTYPADFIAINLQIQTNVIDSAYR+GV+KLLF
Sbjct: 61  SDVESFFANEKPRFVILAAAKVGGIHANNTYPADFIAINLQIQTNVIDSAYRYGVEKLLF 120

Query: 121 LGSSCIYPKFAPQPIPEDALLTGPLEPTNEWYAVAKIAGIKMCQAYRIQHNWNAISGMPT 180
           LGSSCIYPKFAPQPIPEDALLTGPLEPTNEWYAVAKIAGIKMCQAYRIQ+ W+AISGMPT
Sbjct: 121 LGSSCIYPKFAPQPIPEDALLTGPLEPTNEWYAVAKIAGIKMCQAYRIQYKWDAISGMPT 180

Query: 181 NLYGPNDNFHPENSHVLPALMRRFHEAKVNGAKEVVVWGSGSPLREFLHVDDLADAVAFL 240
           NLYGPNDNFHPENSHVLPALMRRFHEAKV GAKEVVVWGSGSPLREFLHVDDLADAV FL
Sbjct: 181 NLYGPNDNFHPENSHVLPALMRRFHEAKVKGAKEVVVWGSGSPLREFLHVDDLADAVVFL 240

Query: 241 MEEYSDLGHVNVGSGKEVSIKELAELVKEVVGFEGDLVWDKSKPDGTPRKLMDSSKLAEL 300
           MEEYSDLGH+NVGSGKEVSIKELAELVKEVVGFEGDLVWDKSKPDGTPRKLMDSSKLAEL
Sbjct: 241 MEEYSDLGHLNVGSGKEVSIKELAELVKEVVGFEGDLVWDKSKPDGTPRKLMDSSKLAEL 300

Query: 301 GWNPKISLKDGLVDTYKWYVQNVQQ 326
           GWNPKISLKDGLVDTYKWYVQNVQQ
Sbjct: 301 GWNPKISLKDGLVDTYKWYVQNVQQ 325

[Close]

BLAST of Carg11958 vs. ExPASy TrEMBL
Match: A0A6J1DH31 (GDP-L-fucose synthase OS=Momordica charantia OX=3673 GN=LOC111020819 PE=3 SV=1)

HSP 1 Score: 642.9 bits (1657), Expect = 7.3e-181
Identity = 313/325 (96.31%), Postives = 320/325 (98.46%), Query Frame = 0


Query: 1   MGGAADNASSGSSFLSDKSAKIFVAGHRGLVGSAIVRKLQQLGFTNLLLRSHSELDLTRQ 60
           MGGAADNASSGSSFLSDKSAKIFVAGHRGLVGSAIVRKLQQLGFTNLLLRSHSELDLTRQ
Sbjct: 1   MGGAADNASSGSSFLSDKSAKIFVAGHRGLVGSAIVRKLQQLGFTNLLLRSHSELDLTRQ 60

Query: 61  SDVESFFANEKPRFVILAAAKVGGIHANNTYPADFIAINLQIQTNVIDSAYRHGVQKLLF 120
           SDVESFFA EKPRFV+LAAAKVGGIHANNTYPADFIA NLQIQTNV+DSAYRHGV+KLLF
Sbjct: 61  SDVESFFAAEKPRFVVLAAAKVGGIHANNTYPADFIAFNLQIQTNVVDSAYRHGVEKLLF 120

Query: 121 LGSSCIYPKFAPQPIPEDALLTGPLEPTNEWYAVAKIAGIKMCQAYRIQHNWNAISGMPT 180
           LGSSCIYPKFAPQPIPEDALLT PLEPTNEWYAVAKIAGIKMCQAYRIQHNW+AISGMPT
Sbjct: 121 LGSSCIYPKFAPQPIPEDALLTAPLEPTNEWYAVAKIAGIKMCQAYRIQHNWDAISGMPT 180

Query: 181 NLYGPNDNFHPENSHVLPALMRRFHEAKVNGAKEVVVWGSGSPLREFLHVDDLADAVAFL 240
           NLYGPNDNFHPENSHVLPALMRRFHEAKVNGAKEVVVWG+GSPLREFLHVDDLADAV FL
Sbjct: 181 NLYGPNDNFHPENSHVLPALMRRFHEAKVNGAKEVVVWGTGSPLREFLHVDDLADAVVFL 240

Query: 241 MEEYSDLGHVNVGSGKEVSIKELAELVKEVVGFEGDLVWDKSKPDGTPRKLMDSSKLAEL 300
           ME+YSDL H+NVGSGKEVSIKELAELVKEVVGFEGDLVWDKSKPDGTPRKLMDSSKLAEL
Sbjct: 241 MEQYSDLSHLNVGSGKEVSIKELAELVKEVVGFEGDLVWDKSKPDGTPRKLMDSSKLAEL 300

Query: 301 GWNPKISLKDGLVDTYKWYVQNVQQ 326
           GWNPKISLKDGLVDTYKWYVQNVQQ
Sbjct: 301 GWNPKISLKDGLVDTYKWYVQNVQQ 325

[Close]

BLAST of Carg11958 vs. TAIR 10
Match: AT1G17890.1 (NAD(P)-binding Rossmann-fold superfamily protein )

HSP 1 Score: 555.8 bits (1431), Expect = 2.2e-158
Identity = 271/324 (83.64%), Postives = 289/324 (89.20%), Query Frame = 0


Query: 5   ADNASS---GSSFLSDKSAKIFVAGHRGLVGSAIVRKLQQLGFTNLLLRSHSELDLTRQS 64
           ADN  S     SF+ +KSAKIFVAGHRGLVGSAIVRKLQ  GFTNL+LR+HSELDLT QS
Sbjct: 2   ADNTGSEMKSGSFMLEKSAKIFVAGHRGLVGSAIVRKLQDQGFTNLVLRTHSELDLTSQS 61

Query: 65  DVESFFANEKPRFVILAAAKVGGIHANNTYPADFIAINLQIQTNVIDSAYRHGVQKLLFL 124
           DVESFFA EKP +VILAAAKVGGIHANNTYPADFI +NLQIQTNVI SAY HGV+KLLFL
Sbjct: 62  DVESFFATEKPVYVILAAAKVGGIHANNTYPADFIGVNLQIQTNVIHSAYTHGVKKLLFL 121

Query: 125 GSSCIYPKFAPQPIPEDALLTGPLEPTNEWYAVAKIAGIKMCQAYRIQHNWNAISGMPTN 184
           GSSCIYPKFAPQPIPE ALLTGPLEPTNEWYA+AKIAGIKMCQAYR+QH W+AISGMPTN
Sbjct: 122 GSSCIYPKFAPQPIPESALLTGPLEPTNEWYAIAKIAGIKMCQAYRLQHQWDAISGMPTN 181

Query: 185 LYGPNDNFHPENSHVLPALMRRFHEAKVNGAKEVVVWGSGSPLREFLHVDDLADAVAFLM 244
           LYG NDNFHPENSHVLPALMRRFHEAK N A EVVVWGSGSPLREFLHVDDLADA  FLM
Sbjct: 182 LYGQNDNFHPENSHVLPALMRRFHEAKANNADEVVVWGSGSPLREFLHVDDLADACVFLM 241

Query: 245 EEYSDLGHVNVGSGKEVSIKELAELVKEVVGFEGDLVWDKSKPDGTPRKLMDSSKLAELG 304
           ++YS   HVNVGSG EV+IKELAELVKEVVGF+G LVWD +KPDGTPRKLMDSSKLA LG
Sbjct: 242 DQYSGFEHVNVGSGVEVTIKELAELVKEVVGFKGKLVWDTTKPDGTPRKLMDSSKLASLG 301

Query: 305 WNPKISLKDGLVDTYKWYVQNVQQ 326
           W PKISLKDGL  TY+WY++NV Q
Sbjct: 302 WTPKISLKDGLSQTYEWYLENVVQ 325

[Close]

BLAST of Carg11958 vs. TAIR 10
Match: AT1G17890.2 (NAD(P)-binding Rossmann-fold superfamily protein )

HSP 1 Score: 555.4 bits (1430), Expect = 2.9e-158
Identity = 267/313 (85.30%), Postives = 285/313 (91.05%), Query Frame = 0


Query: 13  SFLSDKSAKIFVAGHRGLVGSAIVRKLQQLGFTNLLLRSHSELDLTRQSDVESFFANEKP 72
           SF+ +KSAKIFVAGHRGLVGSAIVRKLQ  GFTNL+LR+HSELDLT QSDVESFFA EKP
Sbjct: 5   SFMLEKSAKIFVAGHRGLVGSAIVRKLQDQGFTNLVLRTHSELDLTSQSDVESFFATEKP 64

Query: 73  RFVILAAAKVGGIHANNTYPADFIAINLQIQTNVIDSAYRHGVQKLLFLGSSCIYPKFAP 132
            +VILAAAKVGGIHANNTYPADFI +NLQIQTNVI SAY HGV+KLLFLGSSCIYPKFAP
Sbjct: 65  VYVILAAAKVGGIHANNTYPADFIGVNLQIQTNVIHSAYTHGVKKLLFLGSSCIYPKFAP 124

Query: 133 QPIPEDALLTGPLEPTNEWYAVAKIAGIKMCQAYRIQHNWNAISGMPTNLYGPNDNFHPE 192
           QPIPE ALLTGPLEPTNEWYA+AKIAGIKMCQAYR+QH W+AISGMPTNLYG NDNFHPE
Sbjct: 125 QPIPESALLTGPLEPTNEWYAIAKIAGIKMCQAYRLQHQWDAISGMPTNLYGQNDNFHPE 184

Query: 193 NSHVLPALMRRFHEAKVNGAKEVVVWGSGSPLREFLHVDDLADAVAFLMEEYSDLGHVNV 252
           NSHVLPALMRRFHEAK N A EVVVWGSGSPLREFLHVDDLADA  FLM++YS   HVNV
Sbjct: 185 NSHVLPALMRRFHEAKANNADEVVVWGSGSPLREFLHVDDLADACVFLMDQYSGFEHVNV 244

Query: 253 GSGKEVSIKELAELVKEVVGFEGDLVWDKSKPDGTPRKLMDSSKLAELGWNPKISLKDGL 312
           GSG EV+IKELAELVKEVVGF+G LVWD +KPDGTPRKLMDSSKLA LGW PKISLKDGL
Sbjct: 245 GSGVEVTIKELAELVKEVVGFKGKLVWDTTKPDGTPRKLMDSSKLASLGWTPKISLKDGL 304

Query: 313 VDTYKWYVQNVQQ 326
             TY+WY++NV Q
Sbjct: 305 SQTYEWYLENVVQ 317

[Close]

BLAST of Carg11958 vs. TAIR 10
Match: AT1G17890.3 (NAD(P)-binding Rossmann-fold superfamily protein )

HSP 1 Score: 555.4 bits (1430), Expect = 2.9e-158
Identity = 267/313 (85.30%), Postives = 285/313 (91.05%), Query Frame = 0


Query: 13  SFLSDKSAKIFVAGHRGLVGSAIVRKLQQLGFTNLLLRSHSELDLTRQSDVESFFANEKP 72
           SF+ +KSAKIFVAGHRGLVGSAIVRKLQ  GFTNL+LR+HSELDLT QSDVESFFA EKP
Sbjct: 5   SFMLEKSAKIFVAGHRGLVGSAIVRKLQDQGFTNLVLRTHSELDLTSQSDVESFFATEKP 64

Query: 73  RFVILAAAKVGGIHANNTYPADFIAINLQIQTNVIDSAYRHGVQKLLFLGSSCIYPKFAP 132
            +VILAAAKVGGIHANNTYPADFI +NLQIQTNVI SAY HGV+KLLFLGSSCIYPKFAP
Sbjct: 65  VYVILAAAKVGGIHANNTYPADFIGVNLQIQTNVIHSAYTHGVKKLLFLGSSCIYPKFAP 124

Query: 133 QPIPEDALLTGPLEPTNEWYAVAKIAGIKMCQAYRIQHNWNAISGMPTNLYGPNDNFHPE 192
           QPIPE ALLTGPLEPTNEWYA+AKIAGIKMCQAYR+QH W+AISGMPTNLYG NDNFHPE
Sbjct: 125 QPIPESALLTGPLEPTNEWYAIAKIAGIKMCQAYRLQHQWDAISGMPTNLYGQNDNFHPE 184

Query: 193 NSHVLPALMRRFHEAKVNGAKEVVVWGSGSPLREFLHVDDLADAVAFLMEEYSDLGHVNV 252
           NSHVLPALMRRFHEAK N A EVVVWGSGSPLREFLHVDDLADA  FLM++YS   HVNV
Sbjct: 185 NSHVLPALMRRFHEAKANNADEVVVWGSGSPLREFLHVDDLADACVFLMDQYSGFEHVNV 244

Query: 253 GSGKEVSIKELAELVKEVVGFEGDLVWDKSKPDGTPRKLMDSSKLAELGWNPKISLKDGL 312
           GSG EV+IKELAELVKEVVGF+G LVWD +KPDGTPRKLMDSSKLA LGW PKISLKDGL
Sbjct: 245 GSGVEVTIKELAELVKEVVGFKGKLVWDTTKPDGTPRKLMDSSKLASLGWTPKISLKDGL 304

Query: 313 VDTYKWYVQNVQQ 326
             TY+WY++NV Q
Sbjct: 305 SQTYEWYLENVVQ 317

[Close]

BLAST of Carg11958 vs. TAIR 10
Match: AT1G73250.1 (GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase 1 )

HSP 1 Score: 548.5 bits (1412), Expect = 3.6e-156
Identity = 262/319 (82.13%), Postives = 289/319 (90.60%), Query Frame = 0


Query: 5   ADNASSGSSFLSDKSAKIFVAGHRGLVGSAIVRKLQQLGFTNLLLRSHSELDLTRQSDVE 64
           A+   S  S +SDKSAKIFVAGHRGLVGSAIVRKLQ+ GFTNL+L++H+ELDLTRQ+DVE
Sbjct: 2   AETIGSEVSSMSDKSAKIFVAGHRGLVGSAIVRKLQEQGFTNLVLKTHAELDLTRQADVE 61

Query: 65  SFFANEKPRFVILAAAKVGGIHANNTYPADFIAINLQIQTNVIDSAYRHGVQKLLFLGSS 124
           SFF+ EKP +VILAAAKVGGIHANNTYPADFI +NLQIQTNVI SAY HGV+KLLFLGSS
Sbjct: 62  SFFSQEKPVYVILAAAKVGGIHANNTYPADFIGVNLQIQTNVIHSAYEHGVKKLLFLGSS 121

Query: 125 CIYPKFAPQPIPEDALLTGPLEPTNEWYAVAKIAGIKMCQAYRIQHNWNAISGMPTNLYG 184
           CIYPKFAPQPIPE ALLT  LEPTNEWYA+AKIAGIK CQAYRIQH W+AISGMPTNLYG
Sbjct: 122 CIYPKFAPQPIPESALLTASLEPTNEWYAIAKIAGIKTCQAYRIQHGWDAISGMPTNLYG 181

Query: 185 PNDNFHPENSHVLPALMRRFHEAKVNGAKEVVVWGSGSPLREFLHVDDLADAVAFLMEEY 244
           PNDNFHPENSHVLPALMRRFHEAKVNGA+EVVVWG+GSPLREFLHVDDLADA  FL++ Y
Sbjct: 182 PNDNFHPENSHVLPALMRRFHEAKVNGAEEVVVWGTGSPLREFLHVDDLADACVFLLDRY 241

Query: 245 SDLGHVNVGSGKEVSIKELAELVKEVVGFEGDLVWDKSKPDGTPRKLMDSSKLAELGWNP 304
           S L HVN+GSG+EV+I+ELAELVKEVVGFEG L WD +KPDGTPRKLMDSSKLA LGW P
Sbjct: 242 SGLEHVNIGSGQEVTIRELAELVKEVVGFEGKLGWDCTKPDGTPRKLMDSSKLASLGWTP 301

Query: 305 KISLKDGLVDTYKWYVQNV 324
           K+SL+DGL  TY WY++NV
Sbjct: 302 KVSLRDGLSQTYDWYLKNV 320

[Close]

BLAST of Carg11958 vs. TAIR 10
Match: AT5G59290.1 (UDP-glucuronic acid decarboxylase 3 )

HSP 1 Score: 80.1 bits (196), Expect = 3.6e-15
Identity = 81/310 (26.13%), Postives = 129/310 (41.61%), Query Frame = 0


Query: 21  KIFVAGHRGLVGSAIVRKLQQLGFTNLLLR---------------SHSELDLTRQSDVES 80
           +I ++G  G +GS +V KL +     +++                 H   +L R  DV  
Sbjct: 31  RILISGGAGFIGSHLVDKLMENEKNEVVVADNYFTGSKENLKKWIGHPRFELIRH-DVTE 90

Query: 81  FFANEKPRFVILAAAKVGGIHANNTYPADFIAINLQIQTNVIDSAYRHGVQKLLFLGSSC 140
               E  R   LA       +  N  P   I  N+    N++  A R G  ++L   +S 
Sbjct: 91  PLLIEVDRIYHLACPASPIFYKYN--PVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSE 150

Query: 141 IYPKFAPQPIPEDALLTGPLEP--TNEWYAVAKIAGIKMCQAYRIQHNWNAISGMPTNLY 200
           +Y      P PE     G + P      Y   K     +   Y  QH          N Y
Sbjct: 151 VYGDPLIHPQPES--YWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTY 210

Query: 201 GPNDNFHPENSHVLPALMRRFHEAKVNGAKEVVVWGSGSPLREFLHVDDLADAVAFLMEE 260
           GP  N   ++  V+   +     A+    + + V   G+  R F +V D+ D +  LME 
Sbjct: 211 GPRMNI--DDGRVVSNFI-----AQALRGEALTVQKPGTQTRSFCYVSDMVDGLIRLMEG 270

Query: 261 YSDLGHVNVGSGKEVSIKELAELVKEVVGFEGDLVWDKSKPDGTPRKLMDSSKLAE-LGW 313
            +D G +N+G+  E ++ ELAE VKE++    ++   ++ PD   ++  D SK  E LGW
Sbjct: 271 -NDTGPINIGNPGEFTMVELAETVKELINPSIEIKMVENTPDDPRQRKPDISKAKEVLGW 326

The following BLAST results are available for this feature:

BLAST of Carg11958 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023521193.1	5.3e-186	100.00	putative GDP-L-fucose synthase 2 [Cucurbita pepo subsp. pepo] >KAG7030077.1 puta...	[more]
XP_022946263.1	1.5e-185	99.69	putative GDP-L-fucose synthase 2 [Cucurbita moschata]	[more]
XP_022999738.1	1.0e-184	98.77	putative GDP-L-fucose synthase 2 [Cucurbita maxima]	[more]
XP_038889124.1	3.9e-181	97.23	putative GDP-L-fucose synthase 2 [Benincasa hispida]	[more]
XP_008452484.1	8.8e-181	97.23	PREDICTED: putative GDP-L-fucose synthase 2 [Cucumis melo] >XP_016902552.1 PREDI...	[more]

BLAST of Carg11958 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LMU0	3.2e-157	83.64	Putative GDP-L-fucose synthase 2 OS=Arabidopsis thaliana OX=3702 GN=GER2 PE=1 SV...	[more]
O49213	5.0e-155	82.13	GDP-L-fucose synthase 1 OS=Arabidopsis thaliana OX=3702 GN=GER1 PE=1 SV=3	[more]
Q67WR2	4.1e-149	78.57	Probable GDP-L-fucose synthase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os0...	[more]
Q67WR5	1.8e-107	58.18	Putative GDP-L-fucose synthase 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os0...	[more]
P55353	1.2e-103	59.41	GDP-L-fucose synthase OS=Sinorhizobium fredii (strain NBRC 101917 / NGR234) OX=3...	[more]

BLAST of Carg11958 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G3B1	7.5e-186	99.69	GDP-L-fucose synthase OS=Cucurbita moschata OX=3662 GN=LOC111450399 PE=3 SV=1	[more]
A0A6J1KKK7	4.9e-185	98.77	GDP-L-fucose synthase OS=Cucurbita maxima OX=3661 GN=LOC111493996 PE=3 SV=1	[more]
A0A1S3BTW0	4.3e-181	97.23	GDP-L-fucose synthase OS=Cucumis melo OX=3656 GN=LOC103493500 PE=3 SV=1	[more]
A0A0A0LH41	7.3e-181	96.92	GDP-L-fucose synthase OS=Cucumis sativus OX=3659 GN=Csa_2G036660 PE=3 SV=1	[more]
A0A6J1DH31	7.3e-181	96.31	GDP-L-fucose synthase OS=Momordica charantia OX=3673 GN=LOC111020819 PE=3 SV=1	[more]

BLAST of Carg11958 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G17890.1	2.2e-158	83.64	NAD(P)-binding Rossmann-fold superfamily protein	[more]
AT1G17890.2	2.9e-158	85.30	NAD(P)-binding Rossmann-fold superfamily protein	[more]
AT1G17890.3	2.9e-158	85.30	NAD(P)-binding Rossmann-fold superfamily protein	[more]
AT1G73250.1	3.6e-156	82.13	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase 1	[more]
AT5G59290.1	3.6e-15	26.13	UDP-glucuronic acid decarboxylase 3	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001509	NAD-dependent epimerase/dehydratase	PFAM	PF01370	Epimerase	coord: 22..253 e-value: 8.2E-75 score: 251.4
None	No IPR available	GENE3D	3.40.50.720		coord: 23..306 e-value: 1.3E-126 score: 424.2
None	No IPR available	GENE3D	3.90.25.10		coord: 184..319 e-value: 1.3E-126 score: 424.2
None	No IPR available	PANTHER	PTHR43238:SF5	GDP-L-FUCOSE SYNTHASE 2-RELATED	coord: 8..325
None	No IPR available	PANTHER	PTHR43238	GDP-L-FUCOSE SYNTHASE	coord: 8..325
IPR028614	GDP-L-fucose synthase/GDP-L-colitose synthase	HAMAP	MF_00956	GDP_fucose_synth	coord: 19..321 score: 51.155582
IPR028614	GDP-L-fucose synthase/GDP-L-colitose synthase	CDD	cd05239	GDP_FS_SDR_e	coord: 21..319 e-value: 0.0 score: 542.172
IPR036291	NAD(P)-binding domain superfamily	SUPERFAMILY	51735	NAD(P)-binding Rossmann-fold domains	coord: 18..323

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg11958-RA	Carg11958-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042351	'de novo' GDP-L-fucose biosynthetic process
biological_process	GO:0009226	nucleotide-sugar biosynthetic process
molecular_function	GO:0050577	GDP-L-fucose synthase activity
molecular_function	GO:0003824	catalytic activity
molecular_function	GO:0016491	oxidoreductase activity