Carg11919 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg11919
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
LocationCarg_Chr05: 435968 .. 439271 (-)
RNA-Seq ExpressionCarg11919
SyntenyCarg11919
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAGGAGGCAGAAGAAAAGAAAATAAAGATCGCTTTTTGTATTTATTTGTGCTCGAGGACTTGGATAGTTTTTTGTCTTTTCTCTGGCAATCCATCAGTTCATGAATGTGAGAGGTGTGAGATGTAGATAGAGAAGGAAAGAGGATAATTGATAGTGAAAACTTCTAGGCAGAAATCAGAATTTGTCATTCTTTCATTTGTAATCAAAAGAGTTAGTTGAAGAGGAGAGGGGGACCGTAATGTAAATCCCAGAATAATTTATTTCCAATAAATAAATAATGTTTTTAGATGGAAAGATCGCCTACTTCTGACCATGTTTTTCTTTTGCCTTTTCTTTGCAGAATGAAGCTTGTGATTCTTCGTGATCATCAGTAATGTTTCCTTTTCACCCTTAAATTATTGCATTTAATTAGTCTTTGGAGATGTAGCAATAAGGAGATCGAAGCAAAAGAAATTCTTCAGGTTGAATGTTTCGATTGCCTTAAAGAATATATAGAATGTTCACTGTGGTTACATCCACGCTGGAATTCAGTCCGAGATAAACTTGTCTAATCATTCACTATATAATGCTCAAATCATTCACAGCTCAAGCTAACATCTTATTGCTGCAGATGCTTATCTGGGTCGATGAATTCTTATCCCTTCCGAGTTTTAACTGGATTTTCTTCTGCTCATTTCAGCATACATTTCTTCGATCATTGGTTTCCACAGCCGAACACGAGCATTGATGAACCAATTAGAAACCTGCCCAAATGCAAGAATGGCATAAACTCAGTAATGGTGACGAAATGAAAATTCAAGGAAATCCTGAAGCAGCAAGAACCTGATTTCTGGTTAATCCACTTTTTACTGCAAGTAAATGCTTCTCTGTGTCCTTGGGGTACCTGAAAAATCACAACAGTTTGACACAATTCCATTGAACAAACATTCCTTCAACTTATTTTACATAACTTCAAGATGCAAACCAAATTTGTCTCAGAATCTTACGGATGGAGAAAGTTCTGAAACATCCATGCCCTTAGAACTGAGACAGATTTTTCAGGTAAGCCTCTCTGTGGCCTCCATAATTGACTATCTTTCCTTTTCAACTGCTGGAGAGCCCACTGCTTCTGGATGAATGATGCCTCGAAGGTTTTCTCGTTCTCCTTGGTGCACATTGTGTCAGAATGCATCCCCACAGCAATAATACAATCAGTAATTTTCTCCCTCAAGTTTTTATAAACAGAAGTGATTGTCTGGAGAGTGTAACGAGTATGCAAGCGAGGGTCCAAATCAGTGGCGGCATGAAATGCAGATGTAACAGTATGGATCTCATCCAAGCATTGACTGTACCTTTCATCAATCTGAAACATTATCAAGTTGTTCAGTAATAGAACAGTACAAAGACTATAAAATCAGTAAACCATTATATTCAGTTAACCAACCAATTGTAGTAGAGTCAACAGATGGGATTTCTTGGCATCACCAGATAGTTTTTGCCATTGAATCTCCATTTGAATTTGTGAACTGCATCTACCAGTTACATCAGAACCGAATTCAACTGTATTATCATCCAGGGAACTTGATGAGAATGGCACAAACCCAACTGTGGATGTTAAATGCCTATCTTGTTCTGAACTTTCTAGTGGATAGCTTGCAATTTGAGAAAGTACGTCCTGAATGACCGAGAGATATCTCGATCCCGCTATTGCTTGAGAGAGGTGAACAGGACTACCACATCTGTAACTTAGAGAGAGGTCCCTGAAGTTGCACGAATTCAGGTTCGAGGCTAATTCTGTGCTATTCAAGCAAGGCTGAGTAGCACCAGAAAAGGTCAACTGTGAATACTGGTCCAGAAAATTGGTTCCTCCACTAAGGACGGGATTGGATGTGGCAAGACTAAGAGAAAGCTCATTCCATAACTTGGAGTTCATAGTATTAGATGGCATCCAGCCATTTTGATTCAGATTTTCCATAGACGAGATGGTCTGGAAATCTGATCTTTCTGGATTCTCCCTTGCAAGTTGCTGAATACAGTTAAACCTCTGGCTTTCCCACTTGTTGTTCAAGTTACATAAAGACTCATCACCTTCACAGATCAGAGAACTTGCAAATGAAGAATTTAAAGCATTAGAGGTACTGGGTATGATGCACGTTCTAAAAGTTTCTAATGCCTGGAAATGACGGTCTGGAAATGCTGAATCTTTTGTACTTTCACAAATGACGTTCACCGGAGTAAGAGAGGTGGATTGAAAAAAAGTAACAGGAATTGCTCCTGCTAACTGATTATGAAACTCAGCATTACCAGAGGGACTCGAACAAGCATCCCCCAGATCGATTTGTTGCAGGGCAGTCGACATTGGAGAAGAAACTAAGAACCCCAACTGATCAGATATCAGTACTAGTAAGAACAGAGCATCTAGATTCTGGCAGAGTCAGAAGGATAGGAAATTCAGCTGCAATATGGCTCAGATCATTACGGTCAAATTAATTGGACATATCGACTGGGTTCTGAAAGTGAAGTCATTTGGGCTTAGCCGTATCCACCTGAGAGCATTAATCAAGTCATTTTCCAACTGTTCAAGCTGCAATTCCAATAGCATTTCTAAGTTCAATGCAACATCAAGTTGTTTGTACCAAACAAAAAATAAACCTTCCCAGTTCAAAGGATAAGGAGGAGCACTTTCAGCTAAATCCAGACATCCAAAGTCACATTAGACCAGAATTAACTTCAATATTGAAAGGGAAATTAGCAGTGGTAGCATGCATATCTAGACCCAATTGCCACGAGAATGAAAAGCATGCTACAGATAATGACAAGCCATACCTGGAAGCTTCACAAATTATTACGACACAATGCAATAGAGGGAACAAGCATAACAACATACAAGAGTGAAGGAAACAGTGGTCCACATCAAAAATCACTCTGTAAACCACAAGCCAAAGCATAAAGATTGGGCACTGATTACATGAGATGACAAAGTAACCAACCTTCCACTTGATAAATCTTTATCATCCAAAATAGGATGAGAAACTTAACGTGAAAGCCCCACACTTGATCTTCTGAAAAGTACACTGTGGTCCTGAATTTCTAGGCAAATAAATGGATGTGATAGCTTAGCGAAGAACTTCAAGCTTGCGAAGTATAAAACGCAAAAAAATTGCTACAGTGGTTACATAATTCATGTTTCTTCACACACAGGAGATCAATGACAGCCTAAAAAGGCAAAAGGAGAAGACTAAAAGAAATTGGTTTCTTGTTTCTCCAGAAAAGGGTGCCTATGGTGAGAATCAAGATAAAGCCGATGGTAGAAAAAAGTGA

mRNA sequence

ATGAAAGGAGGCAGAAGAAAAGAAAATAAAGATCGCTTTTTAATGAAGCTTGTGATTCTTCGTGATCATCAATGCAAACCAAATTTGTCTCAGAATCTTACGGATGGAGAAAGTTCTGAAACATCCATGCCCTTAGAACTGAGACAGATTTTTCAGAGGGACTCGAACAAGCATCCCCCAGATCGATTTGTTGCAGGGCAGTCGACATTGGAGAAGAAACTAAGAACCCCAACTGATCAGATATCAGTACTAGAGATCAATGACAGCCTAAAAAGGCAAAAGGAGAAGACTAAAAGAAATTGGTTTCTTGTTTCTCCAGAAAAGGGTGCCTATGGTGAGAATCAAGATAAAGCCGATGGTAGAAAAAAGTGA

Coding sequence (CDS)

ATGAAAGGAGGCAGAAGAAAAGAAAATAAAGATCGCTTTTTAATGAAGCTTGTGATTCTTCGTGATCATCAATGCAAACCAAATTTGTCTCAGAATCTTACGGATGGAGAAAGTTCTGAAACATCCATGCCCTTAGAACTGAGACAGATTTTTCAGAGGGACTCGAACAAGCATCCCCCAGATCGATTTGTTGCAGGGCAGTCGACATTGGAGAAGAAACTAAGAACCCCAACTGATCAGATATCAGTACTAGAGATCAATGACAGCCTAAAAAGGCAAAAGGAGAAGACTAAAAGAAATTGGTTTCTTGTTTCTCCAGAAAAGGGTGCCTATGGTGAGAATCAAGATAAAGCCGATGGTAGAAAAAAGTGA

Protein sequence

MKGGRRKENKDRFLMKLVILRDHQCKPNLSQNLTDGESSETSMPLELRQIFQRDSNKHPPDRFVAGQSTLEKKLRTPTDQISVLEINDSLKRQKEKTKRNWFLVSPEKGAYGENQDKADGRKK
Homology
[Close]
BLAST of Carg11919 vs. NCBI nr
Match: KAG7029269.1 (hypothetical protein SDJN02_07607, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 246.1 bits (627), Expect = 1.5e-61
Identity = 123/123 (100.00%), Postives = 123/123 (100.00%), Query Frame = 0 

Query: 1   MKGGRRKENKDRFLMKLVILRDHQCKPNLSQNLTDGESSETSMPLELRQIFQRDSNKHPP 60
           MKGGRRKENKDRFLMKLVILRDHQCKPNLSQNLTDGESSETSMPLELRQIFQRDSNKHPP
Sbjct: 1   MKGGRRKENKDRFLMKLVILRDHQCKPNLSQNLTDGESSETSMPLELRQIFQRDSNKHPP 60

Query: 61  DRFVAGQSTLEKKLRTPTDQISVLEINDSLKRQKEKTKRNWFLVSPEKGAYGENQDKADG 120
           DRFVAGQSTLEKKLRTPTDQISVLEINDSLKRQKEKTKRNWFLVSPEKGAYGENQDKADG
Sbjct: 61  DRFVAGQSTLEKKLRTPTDQISVLEINDSLKRQKEKTKRNWFLVSPEKGAYGENQDKADG 120

Query: 121 RKK 124
           RKK
Sbjct: 121 RKK 123

The following BLAST results are available for this feature:
BLAST of Carg11919 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7029269.11.5e-61100.00hypothetical protein SDJN02_07607, partial [Cucurbita argyrosperma subsp. argyro... [more]
BLAST of Carg11919 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Carg11919 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Carg11919 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg11919-RACarg11919-RAmRNA