Carg11892 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg11892
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Protein SOB FIVE-LIKE 5
Location	Carg_Chr05: 587426 .. 588719 (-)
RNA-Seq Expression	Carg11892
Synteny	Carg11892

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTCATTTTTCGGGTTCCCATTGTAATAACACTGCCTGTGAATCGGGGTGGACAATGTATTTGGAGGAGTCGTTTCAGACGGAGGGGAGGTTCCGGCCGAGTGCTGTGGATTACGGCGGCAGAGGGAAGGAGGAGGAGGAGGAGGAGGAGGAAGAGGGGGATTTGTCCATGATTTCGGATGCGTCGTCGGGGCCGAGGGATGGGTATTCTGAGGAGAATTGCCAGTCAGTAGGGCGCAATGCGGGGAAAGCCGCGGCGGCCAAAAGTAAGAGGAAAGAGGAAATGGGGCGGCGGAACAAACATTCTTGCCTTGATGACACTGCAAGCTCCCCTGTTTTTGGGCTTTCCAAGGTCGGTTTGCTTCTTCCTCATATCTCTTATTCACATTAAAATTTTATAATTAAATCAATTTAGATTGAATTTTGTTTCTAAATTTTGAATGTATAACTTTCTAAAATTCACGTTGATATAATATAAGAGAAAAAGCACTAAAACCAAGAGTTGATAAGGACTTCTCATTAATGTAAAGAGTTAGTAGTATTAATATAGTGGCATAAAATAGAATCCACTGAATTTAGGCATAAATTATTTATTTATTTATTTTTGTTAAAAAAAAAAAAGTGTCATATCATAGGAACAAAATAAATTATGAATGTACTAAGAATTTAGAATTGTGAATGATATAAAAAAAAAAAAAAAATGTAAGATGTTAGTTGTCGCTGTCAATAATTTGTTGTCAGTCACGTTTTTTGGTTGTGTTGTTTACAGACGAGAGAGACGAATCCATATAGAAATGAAGGTTTGGTGGAGAATGTAAAAGAATTCTCACAAACCCATTCTCGAAAACAACATGGGAAGGTAAAAAAAAAAAAAAGAAAAGAAAAAAAAAAAACTTCATCCCAATCTTTCAATTTTCAAACTAAAAACTAAACAAACAAAAAAAAAATCTGTGTATTGCAGAAACCGACGAGCTTTTTTCAGTCTTCCTCTGCCAAAAAGACGACCAAAAATGTCTCAGGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACAGCTCTGTTTGTGTACGTGTAAGGCTCCAAATTTACCGTGGTTTGTGTGTGCAGGTGATTTTCAGGAACAGTAGAGGGAGGAGGACGACGGGAATAAGTAAAATGAAAATGATAGACACGAGGATCATGGATTATTATGATTATTATTATTGTTATTATTATTATTATTTTGTTCCCTGGCTTTCTTGTCAATGTGGGCAGTTGATTGGAAAGAGTTGAATTATTTGG

mRNA sequence

ATGAGTCATTTTTCGGGTTCCCATTGTAATAACACTGCCTGTGAATCGGGGTGGACAATGTATTTGGAGGAGTCGTTTCAGACGGAGGGGAGGTTCCGGCCGAGTGCTGTGGATTACGGCGGCAGAGGGAAGGAGGAGGAGGAGGAGGAGGAGGAAGAGGGGGATTTGTCCATGATTTCGGATGCGTCGTCGGGGCCGAGGGATGGGTATTCTGAGGAGAATTGCCAGTCAGTAGGGCGCAATGCGGGGAAAGCCGCGGCGGCCAAAAGTAAGAGGAAAGAGGAAATGGGGCGGCGGAACAAACATTCTTGCCTTGATGACACTGCAAGCTCCCCTGTTTTTGGGCTTTCCAAGACGAGAGAGACGAATCCATATAGAAATGAAGGTTTGGTGGAGAATGTAAAAGAATTCTCACAAACCCATTCTCGAAAACAACATGGGAAGAAACCGACGAGCTTTTTTCAGTCTTCCTCTGCCAAAAAGACGACCAAAAATGTCTCAGGTGATTTTCAGGAACAGTAGAGGGAGGAGGACGACGGGAATAAGTAAAATGAAAATGATAGACACGAGGATCATGGATTATTATGATTATTATTATTGTTATTATTATTATTATTTTGTTCCCTGGCTTTCTTGTCAATGTGGGCAGTTGATTGGAAAGAGTTGAATTATTTGG

Coding sequence (CDS)

ATGAGTCATTTTTCGGGTTCCCATTGTAATAACACTGCCTGTGAATCGGGGTGGACAATGTATTTGGAGGAGTCGTTTCAGACGGAGGGGAGGTTCCGGCCGAGTGCTGTGGATTACGGCGGCAGAGGGAAGGAGGAGGAGGAGGAGGAGGAGGAAGAGGGGGATTTGTCCATGATTTCGGATGCGTCGTCGGGGCCGAGGGATGGGTATTCTGAGGAGAATTGCCAGTCAGTAGGGCGCAATGCGGGGAAAGCCGCGGCGGCCAAAAGTAAGAGGAAAGAGGAAATGGGGCGGCGGAACAAACATTCTTGCCTTGATGACACTGCAAGCTCCCCTGTTTTTGGGCTTTCCAAGACGAGAGAGACGAATCCATATAGAAATGAAGGTTTGGTGGAGAATGTAAAAGAATTCTCACAAACCCATTCTCGAAAACAACATGGGAAGAAACCGACGAGCTTTTTTCAGTCTTCCTCTGCCAAAAAGACGACCAAAAATGTCTCAGGTGATTTTCAGGAACAGTAG

Protein sequence

MSHFSGSHCNNTACESGWTMYLEESFQTEGRFRPSAVDYGGRGKEEEEEEEEEGDLSMISDASSGPRDGYSEENCQSVGRNAGKAAAAKSKRKEEMGRRNKHSCLDDTASSPVFGLSKTRETNPYRNEGLVENVKEFSQTHSRKQHGKKPTSFFQSSSAKKTTKNVSGDFQEQ

Homology

[Close]

BLAST of Carg11892 vs. NCBI nr
Match: KAG7029296.1 (hypothetical protein SDJN02_07634, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 339.7 bits (870), Expect = 1.4e-89
Identity = 173/173 (100.00%), Postives = 173/173 (100.00%), Query Frame = 0


Query: 1   MSHFSGSHCNNTACESGWTMYLEESFQTEGRFRPSAVDYGGRGKEEEEEEEEEGDLSMIS 60
           MSHFSGSHCNNTACESGWTMYLEESFQTEGRFRPSAVDYGGRGKEEEEEEEEEGDLSMIS
Sbjct: 1   MSHFSGSHCNNTACESGWTMYLEESFQTEGRFRPSAVDYGGRGKEEEEEEEEEGDLSMIS 60

Query: 61  DASSGPRDGYSEENCQSVGRNAGKAAAAKSKRKEEMGRRNKHSCLDDTASSPVFGLSKTR 120
           DASSGPRDGYSEENCQSVGRNAGKAAAAKSKRKEEMGRRNKHSCLDDTASSPVFGLSKTR
Sbjct: 61  DASSGPRDGYSEENCQSVGRNAGKAAAAKSKRKEEMGRRNKHSCLDDTASSPVFGLSKTR 120

Query: 121 ETNPYRNEGLVENVKEFSQTHSRKQHGKKPTSFFQSSSAKKTTKNVSGDFQEQ 174
           ETNPYRNEGLVENVKEFSQTHSRKQHGKKPTSFFQSSSAKKTTKNVSGDFQEQ
Sbjct: 121 ETNPYRNEGLVENVKEFSQTHSRKQHGKKPTSFFQSSSAKKTTKNVSGDFQEQ 173

[Close]

BLAST of Carg11892 vs. NCBI nr
Match: KAG6598325.1 (hypothetical protein SDJN03_08103, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 331.6 bits (849), Expect = 3.9e-87
Identity = 171/173 (98.84%), Postives = 171/173 (98.84%), Query Frame = 0


Query: 1   MSHFSGSHCNNTACESGWTMYLEESFQTEGRFRPSAVDYGGRGKEEEEEEEEEGDLSMIS 60
           MSHFSGSHCNNTACESGWTMYLEESFQTEGRFRPSAVDYGGRGK EEEEEEEEGDLSMIS
Sbjct: 1   MSHFSGSHCNNTACESGWTMYLEESFQTEGRFRPSAVDYGGRGK-EEEEEEEEGDLSMIS 60

Query: 61  DASSGPRDGYSEENCQSVGRNAGKAAAAKSKRKEEMGRRNKHSCLDDTASSPVFGLSKTR 120
           DASSGPRDGYSEENCQSVGRNAGK AAAKSKRKEEMGRRNKHSCLDDTASSPVFGLSKTR
Sbjct: 61  DASSGPRDGYSEENCQSVGRNAGKPAAAKSKRKEEMGRRNKHSCLDDTASSPVFGLSKTR 120

Query: 121 ETNPYRNEGLVENVKEFSQTHSRKQHGKKPTSFFQSSSAKKTTKNVSGDFQEQ 174
           ETNPYRNEGLVENVKEFSQTHSRKQHGKKPTSFFQSSSAKKTTKNVSGDFQEQ
Sbjct: 121 ETNPYRNEGLVENVKEFSQTHSRKQHGKKPTSFFQSSSAKKTTKNVSGDFQEQ 172

[Close]

BLAST of Carg11892 vs. NCBI nr
Match: XP_022962515.1 (uncharacterized protein LOC111462920 [Cucurbita moschata])

HSP 1 Score: 328.9 bits (842), Expect = 2.6e-86
Identity = 169/173 (97.69%), Postives = 170/173 (98.27%), Query Frame = 0


Query: 1   MSHFSGSHCNNTACESGWTMYLEESFQTEGRFRPSAVDYGGRGKEEEEEEEEEGDLSMIS 60
           MSHFSGSHCNNTACESGWTMYLEESF+TEGRFRP AVDYGGRGK  EEEEEEEGDLSMIS
Sbjct: 1   MSHFSGSHCNNTACESGWTMYLEESFETEGRFRPGAVDYGGRGK--EEEEEEEGDLSMIS 60

Query: 61  DASSGPRDGYSEENCQSVGRNAGKAAAAKSKRKEEMGRRNKHSCLDDTASSPVFGLSKTR 120
           DASSGPRDGYSEENCQSVGRNAGKAAAAKSKRKEEMGRRNKHSCLDDTASSPVFGLSKTR
Sbjct: 61  DASSGPRDGYSEENCQSVGRNAGKAAAAKSKRKEEMGRRNKHSCLDDTASSPVFGLSKTR 120

Query: 121 ETNPYRNEGLVENVKEFSQTHSRKQHGKKPTSFFQSSSAKKTTKNVSGDFQEQ 174
           ETNPYRNEGLVENVKEFSQTHSRKQHGKKPTSFFQSSSAKKTTKNVSGDFQEQ
Sbjct: 121 ETNPYRNEGLVENVKEFSQTHSRKQHGKKPTSFFQSSSAKKTTKNVSGDFQEQ 171

[Close]

BLAST of Carg11892 vs. NCBI nr
Match: XP_023546846.1 (uncharacterized protein LOC111805836 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 326.2 bits (835), Expect = 1.7e-85
Identity = 168/173 (97.11%), Postives = 168/173 (97.11%), Query Frame = 0


Query: 1   MSHFSGSHCNNTACESGWTMYLEESFQTEGRFRPSAVDYGGRGKEEEEEEEEEGDLSMIS 60
           MSHFSGSHCNNTACESGWTMYLEESFQTEGRFRPSAVDYGGRGK     EEEEGDLSMIS
Sbjct: 1   MSHFSGSHCNNTACESGWTMYLEESFQTEGRFRPSAVDYGGRGK-----EEEEGDLSMIS 60

Query: 61  DASSGPRDGYSEENCQSVGRNAGKAAAAKSKRKEEMGRRNKHSCLDDTASSPVFGLSKTR 120
           DASSGPRDGYSEENCQSVGRNAGKAAAAKSKRKEEMGRRNKHSCLDDTASSPVFGLSKTR
Sbjct: 61  DASSGPRDGYSEENCQSVGRNAGKAAAAKSKRKEEMGRRNKHSCLDDTASSPVFGLSKTR 120

Query: 121 ETNPYRNEGLVENVKEFSQTHSRKQHGKKPTSFFQSSSAKKTTKNVSGDFQEQ 174
           ETNPYRNEGLVENVKEFSQTHSRKQHGKKPTSFFQSSSAKKTTKNVSGDFQEQ
Sbjct: 121 ETNPYRNEGLVENVKEFSQTHSRKQHGKKPTSFFQSSSAKKTTKNVSGDFQEQ 168

[Close]

BLAST of Carg11892 vs. NCBI nr
Match: XP_022997597.1 (uncharacterized protein LOC111492483 [Cucurbita maxima])

HSP 1 Score: 321.6 bits (823), Expect = 4.1e-84
Identity = 165/173 (95.38%), Postives = 168/173 (97.11%), Query Frame = 0


Query: 1   MSHFSGSHCNNTACESGWTMYLEESFQTEGRFRPSAVDYGGRGKEEEEEEEEEGDLSMIS 60
           MSHFSGSHCNNTACESGWTMYLEESF+TEGRFRPSAVDYGGRGK EEEEEEEEGDLSMIS
Sbjct: 1   MSHFSGSHCNNTACESGWTMYLEESFETEGRFRPSAVDYGGRGK-EEEEEEEEGDLSMIS 60

Query: 61  DASSGPRDGYSEENCQSVGRNAGKAAAAKSKRKEEMGRRNKHSCLDDTASSPVFGLSKTR 120
           DASSGPRDGYSEENCQSV RN GKAAAAKSKRKE+MGRRNKHSCLDDTASSPVFGLSKTR
Sbjct: 61  DASSGPRDGYSEENCQSVRRNGGKAAAAKSKRKEDMGRRNKHSCLDDTASSPVFGLSKTR 120

Query: 121 ETNPYRNEGLVENVKEFSQTHSRKQHGKKPTSFFQSSSAKKTTKNVSGDFQEQ 174
           ETNPYRNEGLVENVKEFSQTHSRKQHGKKPT FFQSSSAKK TKNVSGDF+EQ
Sbjct: 121 ETNPYRNEGLVENVKEFSQTHSRKQHGKKPTGFFQSSSAKKMTKNVSGDFEEQ 172

[Close]

BLAST of Carg11892 vs. ExPASy Swiss-Prot
Match: Q8L9K4 (Protein SOB FIVE-LIKE 5 OS=Arabidopsis thaliana OX=3702 GN=SOFL5 PE=2 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 6.9e-10
Identity = 55/153 (35.95%), Postives = 81/153 (52.94%), Query Frame = 0


Query: 10  NNTACESGWTMYLEESFQTEGR--FRPS-AVDYGGRGKE-------EEEEEEEEGDLSMI 69
           +++ CESGWT+YL++S  +     FR S   D   R K+        +EEEEEE DLSMI
Sbjct: 4   SSSGCESGWTLYLDQSVSSPSPSCFRDSNGFDSRRRSKDSWDQNYVHQEEEEEEDDLSMI 63

Query: 70  SDASSGPRDGYSEENCQSVGRNAGKAAAAKSKRKEEMGRRNKHSCLDDTASSPVFGLSKT 129
           SDASSGPR+   E++ + +     K    + K++ +  + N  S LDDTASSP+F     
Sbjct: 64  SDASSGPRNISEEDSVKKINIVGLKKQCKREKKRRDYEKMN--SLLDDTASSPLFNFPHM 123

Query: 130 RETNPYRN---EGLVENVKEFSQTHSRKQHGKK 150
            + +   N   +   E+  ++SQ  S  Q   K
Sbjct: 124 LQKSVGGNKIEQTFPESTLDYSQGFSATQFQDK 154

[Close]

BLAST of Carg11892 vs. ExPASy TrEMBL
Match: A0A6J1HFC4 (uncharacterized protein LOC111462920 OS=Cucurbita moschata OX=3662 GN=LOC111462920 PE=3 SV=1)

HSP 1 Score: 328.9 bits (842), Expect = 1.2e-86
Identity = 169/173 (97.69%), Postives = 170/173 (98.27%), Query Frame = 0


Query: 1   MSHFSGSHCNNTACESGWTMYLEESFQTEGRFRPSAVDYGGRGKEEEEEEEEEGDLSMIS 60
           MSHFSGSHCNNTACESGWTMYLEESF+TEGRFRP AVDYGGRGK  EEEEEEEGDLSMIS
Sbjct: 1   MSHFSGSHCNNTACESGWTMYLEESFETEGRFRPGAVDYGGRGK--EEEEEEEGDLSMIS 60

Query: 61  DASSGPRDGYSEENCQSVGRNAGKAAAAKSKRKEEMGRRNKHSCLDDTASSPVFGLSKTR 120
           DASSGPRDGYSEENCQSVGRNAGKAAAAKSKRKEEMGRRNKHSCLDDTASSPVFGLSKTR
Sbjct: 61  DASSGPRDGYSEENCQSVGRNAGKAAAAKSKRKEEMGRRNKHSCLDDTASSPVFGLSKTR 120

Query: 121 ETNPYRNEGLVENVKEFSQTHSRKQHGKKPTSFFQSSSAKKTTKNVSGDFQEQ 174
           ETNPYRNEGLVENVKEFSQTHSRKQHGKKPTSFFQSSSAKKTTKNVSGDFQEQ
Sbjct: 121 ETNPYRNEGLVENVKEFSQTHSRKQHGKKPTSFFQSSSAKKTTKNVSGDFQEQ 171

[Close]

BLAST of Carg11892 vs. ExPASy TrEMBL
Match: A0A6J1K5J3 (uncharacterized protein LOC111492483 OS=Cucurbita maxima OX=3661 GN=LOC111492483 PE=3 SV=1)

HSP 1 Score: 321.6 bits (823), Expect = 2.0e-84
Identity = 165/173 (95.38%), Postives = 168/173 (97.11%), Query Frame = 0


Query: 1   MSHFSGSHCNNTACESGWTMYLEESFQTEGRFRPSAVDYGGRGKEEEEEEEEEGDLSMIS 60
           MSHFSGSHCNNTACESGWTMYLEESF+TEGRFRPSAVDYGGRGK EEEEEEEEGDLSMIS
Sbjct: 1   MSHFSGSHCNNTACESGWTMYLEESFETEGRFRPSAVDYGGRGK-EEEEEEEEGDLSMIS 60

Query: 61  DASSGPRDGYSEENCQSVGRNAGKAAAAKSKRKEEMGRRNKHSCLDDTASSPVFGLSKTR 120
           DASSGPRDGYSEENCQSV RN GKAAAAKSKRKE+MGRRNKHSCLDDTASSPVFGLSKTR
Sbjct: 61  DASSGPRDGYSEENCQSVRRNGGKAAAAKSKRKEDMGRRNKHSCLDDTASSPVFGLSKTR 120

Query: 121 ETNPYRNEGLVENVKEFSQTHSRKQHGKKPTSFFQSSSAKKTTKNVSGDFQEQ 174
           ETNPYRNEGLVENVKEFSQTHSRKQHGKKPT FFQSSSAKK TKNVSGDF+EQ
Sbjct: 121 ETNPYRNEGLVENVKEFSQTHSRKQHGKKPTGFFQSSSAKKMTKNVSGDFEEQ 172

[Close]

BLAST of Carg11892 vs. ExPASy TrEMBL
Match: A0A0A0LR31 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G354620 PE=3 SV=1)

HSP 1 Score: 250.0 bits (637), Expect = 7.3e-63
Identity = 135/174 (77.59%), Postives = 147/174 (84.48%), Query Frame = 0


Query: 1   MSHFSGSHCNNTACESGWTMYLEESFQTEGRFRPSAVDYGGRGKEEEEEEEEEGDLSMIS 60
           MS+F+GSHC+N+ CESGWTMY EES +TE RFR S VDYGG     E+EEEEE DLSMIS
Sbjct: 1   MSNFTGSHCDNSGCESGWTMYFEESIETEERFRGSPVDYGG----GEKEEEEERDLSMIS 60

Query: 61  DASSGPRDGYSEE-NCQSVGRNAGKAAAAKSKRKEEMGRRNKHSCLDDTASSPVFGLSKT 120
           DASSGPR+GY EE NCQSV R+ GK  A KSKR+EEMG RN+HSCLDDTASSPVFGLSK 
Sbjct: 61  DASSGPRNGYYEEKNCQSVSRSGGKLVAGKSKRQEEMGWRNQHSCLDDTASSPVFGLSKI 120

Query: 121 RETNPYRNEGLVENVKEFSQTHSRKQHGKKPTSFFQSSSAKKTTKNVSGDFQEQ 174
           RETNPYRNEGL +NVKEFSQTHSRK HGKK TSFFQSSS KK  KNVSGD+QEQ
Sbjct: 121 RETNPYRNEGLADNVKEFSQTHSRK-HGKKQTSFFQSSSVKKLAKNVSGDYQEQ 169

[Close]

BLAST of Carg11892 vs. ExPASy TrEMBL
Match: A0A1S3BBA3 (uncharacterized protein LOC103487825 OS=Cucumis melo OX=3656 GN=LOC103487825 PE=3 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 3.0e-56
Identity = 128/175 (73.14%), Postives = 141/175 (80.57%), Query Frame = 0


Query: 1   MSHFSGSHCNNTACESGWTMYLEESFQTEGRFRPSAVDYGGRGKEEEEEEEEEGDLSMIS 60
           MS+F+GSH +N+ CESGWTMY EES + E RFR S VDYGG      E+EEEEGDLSMIS
Sbjct: 1   MSNFTGSHYDNSGCESGWTMYFEESIEKEERFRGSPVDYGG-----GEKEEEEGDLSMIS 60

Query: 61  DASSGPRDGYSEE-NCQSVGRNAGKAAAAKSKRKEEMGRRNKHSCLDDTASSPVFGLSKT 120
           DASSGPR+GY EE +C SV R+ GK  A KSKR+EEMG RN+HSCLDDTASSPV GLSK 
Sbjct: 61  DASSGPRNGYYEEKDCPSVLRSGGKLVAGKSKRQEEMGWRNQHSCLDDTASSPVLGLSKI 120

Query: 121 RET-NPYRNEGLVENVKEFSQTHSRKQHGKKPTSFFQSSSAKKTTKNVSGDFQEQ 174
           RET NPYRNEGL +N KEFSQTHSRK HGKK TSFFQSSS KK  KNVSGD+ EQ
Sbjct: 121 RETNNPYRNEGLADNAKEFSQTHSRK-HGKKQTSFFQSSSVKKLAKNVSGDYPEQ 169

[Close]

BLAST of Carg11892 vs. ExPASy TrEMBL
Match: A0A6J1BRF5 (uncharacterized protein LOC111005036 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111005036 PE=3 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 1.7e-48
Identity = 115/179 (64.25%), Postives = 137/179 (76.54%), Query Frame = 0


Query: 1   MSHFSGSHCNNTACESGWTMYLEESFQTEGRFRPSAVDYGGRGKEEEEEEEEEGDLSMIS 60
           MS+FSG+HC N+ C+SGWT+Y ++S   + RFRPS  DYGG         EEEGDLSM+S
Sbjct: 1   MSNFSGTHC-NSGCDSGWTVYFQDS---DERFRPSVADYGG--------GEEEGDLSMVS 60

Query: 61  DASSGPRD-------GYSEENCQSVGRNAGKAAAAKSKRKEEMGRRNKHSCLDDTASSPV 120
           DASSGPR+       G+ E N Q V R  G  +AAK+KR++E+GRRN+HS LDDTA+SPV
Sbjct: 61  DASSGPRNGFGDGPVGFEEXNFQPVPRRNGGKSAAKTKRRDEIGRRNQHSSLDDTATSPV 120

Query: 121 FGLSKTRETNPYRNEGLVENVKEFSQTHSRKQHGKKPTSFFQSSSAKKTTKNVSGDFQE 173
           F LSK RETNPY NE LVENVKEF+ +HSRKQ GKK TSFFQSSSAKK+T+NVSGDFQE
Sbjct: 121 FALSK-RETNPYTNEDLVENVKEFAHSHSRKQQGKKQTSFFQSSSAKKSTRNVSGDFQE 166

[Close]

BLAST of Carg11892 vs. TAIR 10
Match: AT4G33800.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 65.5 bits (158), Expect = 4.9e-11
Identity = 55/153 (35.95%), Postives = 81/153 (52.94%), Query Frame = 0


Query: 10  NNTACESGWTMYLEESFQTEGR--FRPS-AVDYGGRGKE-------EEEEEEEEGDLSMI 69
           +++ CESGWT+YL++S  +     FR S   D   R K+        +EEEEEE DLSMI
Sbjct: 4   SSSGCESGWTLYLDQSVSSPSPSCFRDSNGFDSRRRSKDSWDQNYVHQEEEEEEDDLSMI 63

Query: 70  SDASSGPRDGYSEENCQSVGRNAGKAAAAKSKRKEEMGRRNKHSCLDDTASSPVFGLSKT 129
           SDASSGPR+   E++ + +     K    + K++ +  + N  S LDDTASSP+F     
Sbjct: 64  SDASSGPRNISEEDSVKKINIVGLKKQCKREKKRRDYEKMN--SLLDDTASSPLFNFPHM 123

Query: 130 RETNPYRN---EGLVENVKEFSQTHSRKQHGKK 150
            + +   N   +   E+  ++SQ  S  Q   K
Sbjct: 124 LQKSVGGNKIEQTFPESTLDYSQGFSATQFQDK 154

The following BLAST results are available for this feature:

BLAST of Carg11892 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7029296.1	1.4e-89	100.00	hypothetical protein SDJN02_07634, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6598325.1	3.9e-87	98.84	hypothetical protein SDJN03_08103, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022962515.1	2.6e-86	97.69	uncharacterized protein LOC111462920 [Cucurbita moschata]	[more]
XP_023546846.1	1.7e-85	97.11	uncharacterized protein LOC111805836 [Cucurbita pepo subsp. pepo]	[more]
XP_022997597.1	4.1e-84	95.38	uncharacterized protein LOC111492483 [Cucurbita maxima]	[more]

BLAST of Carg11892 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L9K4	6.9e-10	35.95	Protein SOB FIVE-LIKE 5 OS=Arabidopsis thaliana OX=3702 GN=SOFL5 PE=2 SV=1	[more]

BLAST of Carg11892 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HFC4	1.2e-86	97.69	uncharacterized protein LOC111462920 OS=Cucurbita moschata OX=3662 GN=LOC1114629...	[more]
A0A6J1K5J3	2.0e-84	95.38	uncharacterized protein LOC111492483 OS=Cucurbita maxima OX=3661 GN=LOC111492483...	[more]
A0A0A0LR31	7.3e-63	77.59	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G354620 PE=3 SV=1	[more]
A0A1S3BBA3	3.0e-56	73.14	uncharacterized protein LOC103487825 OS=Cucumis melo OX=3656 GN=LOC103487825 PE=...	[more]
A0A6J1BRF5	1.7e-48	64.25	uncharacterized protein LOC111005036 isoform X1 OS=Momordica charantia OX=3673 G...	[more]

BLAST of Carg11892 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G33800.1	4.9e-11	35.95	unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae -...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 27..173
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 87..105
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 106..126
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 149..173
None	No IPR available	PANTHER	PTHR33347:SF40	SUBFAMILY NOT NAMED	coord: 7..164
IPR044670	SOB-five-Like (SOFL) family	PANTHER	PTHR33347	OSJNBA0091C07.3 PROTEIN	coord: 7..164

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg11892-RA	Carg11892-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009736	cytokinin-activated signaling pathway
biological_process	GO:0009691	cytokinin biosynthetic process
biological_process	GO:0009690	cytokinin metabolic process