Carg11863 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg11863
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Mannose-P-dolichol utilization defect 1 protein homolog
Location	Carg_Chr05: 705526 .. 708960 (-)
RNA-Seq Expression	Carg11863
Synteny	Carg11863

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATTTCACCTGTGTTTTCGGAGCTCTAAACCACGGCAAGTTCCCGGAGAAAGATTGCCTGCTACCCCTCATCTCTAAGCTTCTCGGCTATTGCATTGTCGCCGCTTCAACCACCGTCAAACTTCCTCAGGCAAGCTATTCTGCCTTCCCTCCCTAGACTATAAACATATCTGTTTTGACTTTATCGACGGAAATGTGATGGAATCATAGCGTTTGTAATAAATGTTCGCCTGGGTTTTATTCGTGAGGTTCGGTTTGCCCTCTAATTCCGTGTAATGCAATTCAAGACCCGTGAAATGTTTGTGAACAATTTTTGTGTTGTGTAAAGTGGCGGTTGATAATAATTTTTTAATGGTTAATCTTGATAATAAACTTTTTAGGCTAAATTTTGCTAATAATTTTTGTTAGGTTCAATTAGTTCAGTTATAAGTAAGCATCTGATACCTAAACTTTTTTGGGTGTAGCTAAGAATTGCAACTTGTTCCTGTTCCAAGTCTAATTAGGTCCTAAATAAATCTCTTAAACTTGCATCAATCACCGCAGAAGATCCCCACGCTTCCTTTAAATTCAAATATTTATTTATTTATTGTTTTCTTCCTGTTCAACGTTGCTGCCTGAATAATTTTTACCATTTCTCTTGTATGCATCCTACGATGGGAAGATTGGCTCCCTCCCTGTTCCATTTTCGTCGTTAGTTCTTTACATGCCATCATTGTAATACAAAATTTTTTCCTACAGATTATGAAGATCTTGAAACATCAGAGTATCAGAGGACTTGGTGTTATATCCTTTGAGCTAGAAGTCGTAGGTTACACTATTGCTCTGGCTTATTGTGTCCACAAAAGACTTCCATTTTCAGCTTATGGGGAATTGGTTTTTCTCTTGGTTCAAGGTATATTGGGAACTACTAAAAAATTGCTGCCACGGAGTCATTTCTCTGGAAAAACTCCATAAAATACGTTGCTGATAAAAGTGGGAAAATGCAAACTACTCAGACAATCTGAGTCTTAGTTCATGATTTGCTCATTGTGCTAGGTTGCATTTTCAGAACCATTGGTTATATGCTTGCTTTAATTTTGTTTACTCAAATGCATGGATGTTTTTGCTATTAATTAAATCGAATTAGCCTCTTTTTATGCGCATTTTTTTGTCCTTTTTTTTTTTTTTTTTTTTTTTTGCCACAGCTATAATTTTGGTTGCCGTTATCTACTATTATTCTCAGCTTATTGGTATGAAAACGTGGATCAGAGCGTTACTGTATCCTATTTGTTTTTTACCTGTTCAGATTCTGCTTCTTTCTTGTCGCATGCTTCTATAATGAGAACATTTCAACTGAGATCCTCCTGTGTTTTTATTTATATATTAATTTTTGCAAAAGAAGGGAGAAACTTGTAACTGCCTTAACACGCTGCCACTCAGATATTGTGCTCTAGCACCAACAGTTCTAGCCGGTCAGATTAATCCTGCTCTCTTTGAAGCTCTTTACGCAAGTCTCGTACTGTTTTTTTTAGGATTTATCTCTTAATCCATGTTTTAAGCTTTTTCAATTTCTTGTAAATTGTTCTTTAGATATTTTTACTGCCTGTCACTAATGTATTTGTTCATTCCTCGAAGAAGGTAAATAAATGAAGAAAAATTAAAGACTAACCTTTATATGTGTTGAAAATGTTCTCCTGTAATAGCTCTACACTAAAATCTTTGCCAATTTGGAAACTTCCTTTCAGGTATCTCAACATGCAGTTTTTCTCTTCTCGAGGATCCCACAAATATGGAAGAACTTTTCTGTAAGTTTATTTGAAGGTTCTATTATACGATTTCAAATGTTCAATTAAATTACCCTTTGGGAAGGAAGAAAAAAAAGTCGGGAAAAAATATTAAATGATATTGGACGATCTGTACCATTGTCATAATTTCTCCAATTGCATTTCAAAATATTAGGAAAGTGGTTCGCAACTGAACCTTGTAATCACGAAACAAGCTGTTGTCATGTTAACCAATGACAGTTCAAGTGAGAGTTTACCTTTCCTTTTGAGCATAAGCTCCATGGTTTTTTGCCTTTTGGATTAACCCAATAGGCCTCACACCAATGAAGCTATCATTCCTCACTTCTGTACTCGTGATCTCTCCCTTATCTAATATAGAACTTTAGTTGCATTCCCAACATATATAAATAATCTTTTCTTTGGCTTGATATCATGTCTTAACCGTATTTTGTTTTGATATCTTCAATGAAAGTTCTCATTCAAAAAAAGTAATCCTCTGTACAGAACAAAAGTACTGGGGAGCTTAGCCTTTTAACATCCATGATGAACTTTGGAGGTTCTATGGGTAAGACGATTGCCTGATGAGATTTAGTCGGTTGCATTAGTTTTCTCGTGAAGACATCAAGGTTTATTCCATTTTTCTTTTGCAGTGAGGGTTTTGACCAGCATCCAAGCAGTGGTATCCTCTTTTTAAAATTTATTTTTATTTTTTCCTTTCCGCACTTATATTATTTGGGTAGTAGTTTCAGTGATAACATCTTACAAGAATTCAAGAATCAGTCTCATGCATAAGTTTTGGGCTTTTCTAGGTTGAGCCTTTGCTCAAACCCTTTTTCCGATTTTACTAACACATTTTCATTTCTTGTAGTCATCGGTTACATTACTTGAAAAATATAAACTTGATGGCAAAATTCAAATACTCCCTTTTTCTGTTTGTAGAAAATGCATTGCTGCATTAGTCCTCTCTAGGTCTTTGAAAACTTGCTCCCACTGGCTCTCTGGTTTTATGAGTCAGCTCTCATTCTTTTTTGTTGTTAATATAATCCATTCAAGTTATTTTCCTAGATGTTTATTCATTTTGATAAACCGTGGTCCTTAAAGCTTGTCAAAGTTCTCTTGGGATCCACACGTTCTATTGTGACACACAGTACCATTTTGAGTCAGATAATTGTATACCAGAAAGAGGGATGTAAAGAGAAGAGAAGAAAACAGCGTAGAGAATGACGACTTCCAGTCGTGACTTAGGCATACTGAAGATTAAATATTGTATGTAGTGAGTATAGGTGAACCAATGTCAAACCCTTTTCCAGATTATCATTTTACTACTAGAAACCCATAGTTTTCCTTTCTTTTCTTTTGGAATATGACTTATGAGGGCACAGTGATAGCTGGAATTATTGTAGGTTTGGACTGTGATCTCCACCGGACTGCAGTCCCGCATAACTTTATATATGTGATGTTTTTGTTGTACTGGTTCTGGATTGTCATGATAATTCTGAAGGGAAAGGAATGTGTTGTCAACTCATTTCTCATCATCGTGTTTCGTAGACTTTTGGTAGCTAACAAATGATTACGACCACTTATTAAGAACCGATCATCCATATCAATTATATCACTCTAAGATGGAAAATTTTCATTTTAACCTTAATTTTGTTTCGTAACAGTTTTAG

mRNA sequence

ATGGATTTCACCTGTGTTTTCGGAGCTCTAAACCACGGCAAGTTCCCGGAGAAAGATTGCCTGCTACCCCTCATCTCTAAGCTTCTCGGCTATTGCATTGTCGCCGCTTCAACCACCATTATGAAGATCTTGAAACATCAGAGTATCAGAGGACTTGGTGTTATATCCTTTGAGCTAGAAGTCGTAGGTTACACTATTGCTCTGGCTTATTGTGTCCACAAAAGACTTCCATTTTCAGCTTATGGGGAATTGGTTTTTCTCTTGGTTCAAGCTATAATTTTGGTTGCCGTTATCTACTATTATTCTCAGCTTATTGATTCTGCTTCTTTCTTGTCGCATGCTTCTATAATGAGAACATTTCAACTGAGATCCTCCTGTGGAGAAACTTGTAACTGCCTTAACACGCTGCCACTCAGATATTGTGCTCTAGCACCAACAGTTCTAGCCGGTCAGATTAATCCTGCTCTCTTTGAAGCTCTTTACGCAAGTCTCATATTTTTACTGCCTGTCACTAATGTATTTGTTCATTCCTCGAAGAAGTTTTAG

Coding sequence (CDS)

ATGGATTTCACCTGTGTTTTCGGAGCTCTAAACCACGGCAAGTTCCCGGAGAAAGATTGCCTGCTACCCCTCATCTCTAAGCTTCTCGGCTATTGCATTGTCGCCGCTTCAACCACCATTATGAAGATCTTGAAACATCAGAGTATCAGAGGACTTGGTGTTATATCCTTTGAGCTAGAAGTCGTAGGTTACACTATTGCTCTGGCTTATTGTGTCCACAAAAGACTTCCATTTTCAGCTTATGGGGAATTGGTTTTTCTCTTGGTTCAAGCTATAATTTTGGTTGCCGTTATCTACTATTATTCTCAGCTTATTGATTCTGCTTCTTTCTTGTCGCATGCTTCTATAATGAGAACATTTCAACTGAGATCCTCCTGTGGAGAAACTTGTAACTGCCTTAACACGCTGCCACTCAGATATTGTGCTCTAGCACCAACAGTTCTAGCCGGTCAGATTAATCCTGCTCTCTTTGAAGCTCTTTACGCAAGTCTCATATTTTTACTGCCTGTCACTAATGTATTTGTTCATTCCTCGAAGAAGTTTTAG

Protein sequence

MDFTCVFGALNHGKFPEKDCLLPLISKLLGYCIVAASTTIMKILKHQSIRGLGVISFELEVVGYTIALAYCVHKRLPFSAYGELVFLLVQAIILVAVIYYYSQLIDSASFLSHASIMRTFQLRSSCGETCNCLNTLPLRYCALAPTVLAGQINPALFEALYASLIFLLPVTNVFVHSSKKF

Homology

[Close]

BLAST of Carg11863 vs. NCBI nr
Match: KAG7029325.1 (Mannose-P-dolichol utilization defect 1 protein-like 2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 354.8 bits (909), Expect = 4.5e-94
Identity = 181/181 (100.00%), Postives = 181/181 (100.00%), Query Frame = 0


Query: 1   MDFTCVFGALNHGKFPEKDCLLPLISKLLGYCIVAASTTIMKILKHQSIRGLGVISFELE 60
           MDFTCVFGALNHGKFPEKDCLLPLISKLLGYCIVAASTTIMKILKHQSIRGLGVISFELE
Sbjct: 1   MDFTCVFGALNHGKFPEKDCLLPLISKLLGYCIVAASTTIMKILKHQSIRGLGVISFELE 60

Query: 61  VVGYTIALAYCVHKRLPFSAYGELVFLLVQAIILVAVIYYYSQLIDSASFLSHASIMRTF 120
           VVGYTIALAYCVHKRLPFSAYGELVFLLVQAIILVAVIYYYSQLIDSASFLSHASIMRTF
Sbjct: 61  VVGYTIALAYCVHKRLPFSAYGELVFLLVQAIILVAVIYYYSQLIDSASFLSHASIMRTF 120

Query: 121 QLRSSCGETCNCLNTLPLRYCALAPTVLAGQINPALFEALYASLIFLLPVTNVFVHSSKK 180
           QLRSSCGETCNCLNTLPLRYCALAPTVLAGQINPALFEALYASLIFLLPVTNVFVHSSKK
Sbjct: 121 QLRSSCGETCNCLNTLPLRYCALAPTVLAGQINPALFEALYASLIFLLPVTNVFVHSSKK 180

Query: 181 F 182
           F
Sbjct: 181 F 181

[Close]

BLAST of Carg11863 vs. NCBI nr
Match: XP_022962459.1 (mannose-P-dolichol utilization defect 1 protein homolog 2-like [Cucurbita moschata])

HSP 1 Score: 233.8 bits (595), Expect = 1.2e-57
Identity = 130/168 (77.38%), Postives = 133/168 (79.17%), Query Frame = 0


Query: 1   MDFTCVFGALNHGKFPEKDCLLPLISKLLGYCIVAASTT-----IMKILKHQSIRGLGVI 60
           MDFTCVFGALNHGKFPEKDCLLPLISKLLGYCIVAASTT     IMKILKHQSIRGLGVI
Sbjct: 1   MDFTCVFGALNHGKFPEKDCLLPLISKLLGYCIVAASTTVKLPQIMKILKHQSIRGLGVI 60

Query: 61  SFELEVVGYTIALAYCVHKRLPFSAYGELVFLLVQAIILVAVIYYYSQLIDSASFLSHAS 120
           SFELEVVGYTIALAYCVHKRLPFSAYGELVFLLVQAIILVAVIYYYSQLI   +++    
Sbjct: 61  SFELEVVGYTIALAYCVHKRLPFSAYGELVFLLVQAIILVAVIYYYSQLIGMKTWIR--- 120

Query: 121 IMRTFQLRSSCGETCNCLNTLPLRYCALAPTVLAGQINPALFEALYAS 164
                                 L YCALAPTVLAGQINPALFEALYAS
Sbjct: 121 ---------------------ALLYCALAPTVLAGQINPALFEALYAS 144

[Close]

BLAST of Carg11863 vs. NCBI nr
Match: KAG6598354.1 (Mannose-P-dolichol utilization defect 1 protein-like 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 232.3 bits (591), Expect = 3.4e-57
Identity = 129/168 (76.79%), Postives = 132/168 (78.57%), Query Frame = 0


Query: 1   MDFTCVFGALNHGKFPEKDCLLPLISKLLGYCIVAASTT-----IMKILKHQSIRGLGVI 60
           MDFTCVFGALNHGKFPEKDCLLPLISKLLGYCIVAASTT     IMKILKHQSIRGLGVI
Sbjct: 63  MDFTCVFGALNHGKFPEKDCLLPLISKLLGYCIVAASTTVKLPQIMKILKHQSIRGLGVI 122

Query: 61  SFELEVVGYTIALAYCVHKRLPFSAYGELVFLLVQAIILVAVIYYYSQLIDSASFLSHAS 120
           SFELEVVGYTIALAYCVHKRLPFSAYGELVFLLVQAIILVAVIYYYSQLI   +++    
Sbjct: 123 SFELEVVGYTIALAYCVHKRLPFSAYGELVFLLVQAIILVAVIYYYSQLIGMKTWIR--- 182

Query: 121 IMRTFQLRSSCGETCNCLNTLPLRYCALAPTVLAGQINPALFEALYAS 164
                                 L YCALAPTVLAGQINPALFEALY S
Sbjct: 183 ---------------------ALLYCALAPTVLAGQINPALFEALYVS 206

[Close]

BLAST of Carg11863 vs. NCBI nr
Match: XP_023545478.1 (mannose-P-dolichol utilization defect 1 protein homolog 2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 224.6 bits (571), Expect = 7.1e-55
Identity = 126/168 (75.00%), Postives = 130/168 (77.38%), Query Frame = 0


Query: 1   MDFTCVFGALNHGKFPEKDCLLPLISKLLGYCIVAASTT-----IMKILKHQSIRGLGVI 60
           MDFTCVFGALNHGKFPEKDCLLPLISKLLGYCIVAASTT     IMKILKHQSIRGL VI
Sbjct: 6   MDFTCVFGALNHGKFPEKDCLLPLISKLLGYCIVAASTTVKLPQIMKILKHQSIRGLSVI 65

Query: 61  SFELEVVGYTIALAYCVHKRLPFSAYGELVFLLVQAIILVAVIYYYSQLIDSASFLSHAS 120
           SFELEVVGYTIALAYCVHKRLPFSAYGELVFLLVQAI+LVAVIYYYSQ I   +++    
Sbjct: 66  SFELEVVGYTIALAYCVHKRLPFSAYGELVFLLVQAIVLVAVIYYYSQPIGMKTWIR--- 125

Query: 121 IMRTFQLRSSCGETCNCLNTLPLRYCALAPTVLAGQINPALFEALYAS 164
                                 L YCALAPTVLAGQIN ALFEALYAS
Sbjct: 126 ---------------------ALLYCALAPTVLAGQINLALFEALYAS 149

[Close]

BLAST of Carg11863 vs. NCBI nr
Match: XP_004142876.1 (mannose-P-dolichol utilization defect 1 protein homolog 2 [Cucumis sativus] >XP_008444595.1 PREDICTED: mannose-P-dolichol utilization defect 1 protein homolog 2 [Cucumis melo] >ADN33725.1 mannose-P-dolichol utilization defect 1 protein [Cucumis melo subsp. melo] >KGN62483.1 hypothetical protein Csa_018783 [Cucumis sativus])

HSP 1 Score: 218.0 bits (554), Expect = 6.6e-53
Identity = 121/168 (72.02%), Postives = 128/168 (76.19%), Query Frame = 0


Query: 1   MDFTCVFGALNHGKFPEKDCLLPLISKLLGYCIVAASTT-----IMKILKHQSIRGLGVI 60
           MDF+CVFG+L+HGKFPEKDCLLPLISKLLGYCIVAASTT     IMKILKHQS+RGL VI
Sbjct: 6   MDFSCVFGSLSHGKFPEKDCLLPLISKLLGYCIVAASTTVKLPQIMKILKHQSVRGLSVI 65

Query: 61  SFELEVVGYTIALAYCVHKRLPFSAYGELVFLLVQAIILVAVIYYYSQLIDSASFLSHAS 120
           SFELEVVGYTIALAYCVHK LPFSAYGEL FLLVQAIILVAVIYYYSQ I   +++    
Sbjct: 66  SFELEVVGYTIALAYCVHKGLPFSAYGELAFLLVQAIILVAVIYYYSQPIGMKTWIR--- 125

Query: 121 IMRTFQLRSSCGETCNCLNTLPLRYCALAPTVLAGQINPALFEALYAS 164
                                 L YCALAPTVLAGQINP LFEALYAS
Sbjct: 126 ---------------------ALLYCALAPTVLAGQINPVLFEALYAS 149

[Close]

BLAST of Carg11863 vs. ExPASy Swiss-Prot
Match: Q8VY63 (Mannose-P-dolichol utilization defect 1 protein homolog 2 OS=Arabidopsis thaliana OX=3702 GN=At4g07390 PE=2 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 2.5e-47
Identity = 100/168 (59.52%), Postives = 122/168 (72.62%), Query Frame = 0


Query: 1   MDFTCVFGALNHGKFPEKDCLLPLISKLLGYCIVAASTT-----IMKILKHQSIRGLGVI 60
           +D +C  G+L +G FPEKDCLLPLISKLLGYC+VAAS T     IMKI++H+S+RGL V+
Sbjct: 6   IDMSCAIGSLRNGDFPEKDCLLPLISKLLGYCLVAASITVKLPQIMKIVQHKSVRGLSVV 65

Query: 61  SFELEVVGYTIALAYCVHKRLPFSAYGELVFLLVQAIILVAVIYYYSQLIDSASFLSHAS 120
           +FELEVVGYTI+LAYC+HK LPFSA+GE+ FLL+QA+ILVA IYYYSQ +   +++    
Sbjct: 66  AFELEVVGYTISLAYCLHKGLPFSAFGEMAFLLIQALILVACIYYYSQPVPVTTWIR--- 125

Query: 121 IMRTFQLRSSCGETCNCLNTLPLRYCALAPTVLAGQINPALFEALYAS 164
                                PL YCA+APTVLAGQINP LFEALYAS
Sbjct: 126 ---------------------PLLYCAVAPTVLAGQINPTLFEALYAS 149

[Close]

BLAST of Carg11863 vs. ExPASy Swiss-Prot
Match: Q9LTI3 (Mannose-P-dolichol utilization defect 1 protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=At5g59470 PE=2 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 2.5e-39
Identity = 92/174 (52.87%), Postives = 121/174 (69.54%), Query Frame = 0


Query: 1   MDFTCVFGALNHGKFPEKDCLLPLISKLLGYCIVAASTT-----IMKILKHQSIRGLGVI 60
           +D +C  G+L +G+FP KDCLLPLISKLLGY +VAAS T     IMKI+ ++S++GL V+
Sbjct: 6   IDLSCAIGSLRNGEFPAKDCLLPLISKLLGYFLVAASMTVKLPQIMKIVDNKSVKGLSVV 65

Query: 61  SFELEVVGYTIALAYCVHKRLPFSAYGELVFLLVQAIILVAVIYYYSQLIDSASFLSHAS 120
           +FELEV+GYTI+LAYC++K LPFSA+GEL FLL+QA+ILVA IYY+SQ +   +++    
Sbjct: 66  AFELEVIGYTISLAYCLNKDLPFSAFGELAFLLIQALILVACIYYFSQPLSVTTWVK--- 125

Query: 121 IMRTFQLRSSCGETCNCLNTLPLRYCALAPTVLAGQINPALFEALYAS--LIFL 168
                                 + Y A+APTV AG+I+P LFEALYAS  LIFL
Sbjct: 126 ---------------------AILYFAIAPTVFAGKIDPFLFEALYASKHLIFL 155

[Close]

BLAST of Carg11863 vs. ExPASy Swiss-Prot
Match: O75352 (Mannose-P-dolichol utilization defect 1 protein OS=Homo sapiens OX=9606 GN=MPDU1 PE=1 SV=2)

HSP 1 Score: 53.1 bits (126), Expect = 3.7e-06
Identity = 38/99 (38.38%), Postives = 55/99 (55.56%), Query Frame = 0


Query: 20  CLLPLISKLLGYCIVAAS-----TTIMKILKHQSIRGLGVISFELEVVGYTIALAYCVHK 79
           CL  L+SK LG  IVA S       + KIL  +S  GL + S  LE+V  T  + Y +  
Sbjct: 37  CLKILLSKGLGLGIVAGSLLVKLPQVFKILGAKSAEGLSLQSVMLELVALTGTMVYSITN 96

Query: 80  RLPFSAYGELVFLLVQAI-ILVAVIYYYSQLIDSASFLS 113
             PFS++GE +FL++Q I I   V++Y  Q +   +FL+
Sbjct: 97  NFPFSSWGEALFLMLQTITICFLVMHYRGQTVKGVAFLA 135

[Close]

BLAST of Carg11863 vs. ExPASy Swiss-Prot
Match: Q60441 (Mannose-P-dolichol utilization defect 1 protein OS=Cricetulus griseus OX=10029 GN=MPDU1 PE=2 SV=2)

HSP 1 Score: 52.8 bits (125), Expect = 4.8e-06
Identity = 36/95 (37.89%), Postives = 50/95 (52.63%), Query Frame = 0


Query: 12  HGKFPEKDCLLPLISKLLGYCIVAAS-----TTIMKILKHQSIRGLGVISFELEVVGYTI 71
           H  F    CL  L+SK LG  IVA S       I KIL  +S  GL + S  LE+V  T 
Sbjct: 29  HWDFLHVPCLKILLSKGLGLGIVAGSLLVKLPQIFKILGAKSAEGLSLQSVMLELVALTG 88

Query: 72  ALAYCVHKRLPFSAYGELVFLLVQAIILVAVIYYY 102
            + Y +    PFS++GE +FL +Q I +  ++ +Y
Sbjct: 89  TVIYSITNNFPFSSWGEALFLTLQTITICLLVLHY 123

[Close]

BLAST of Carg11863 vs. ExPASy Swiss-Prot
Match: Q9R0Q9 (Mannose-P-dolichol utilization defect 1 protein OS=Mus musculus OX=10090 GN=Mpdu1 PE=1 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 5.4e-05
Identity = 35/99 (35.35%), Postives = 54/99 (54.55%), Query Frame = 0


Query: 20  CLLPLISKLLGYCIVAAS-----TTIMKILKHQSIRGLGVISFELEVVGYTIALAYCVHK 79
           CL  L+SK LG  IVA S       + K+L  +S  GL + S  LE+V  T  + Y +  
Sbjct: 37  CLKILLSKGLGLGIVAGSLLVKLPQVFKLLGAKSAEGLSLQSVMLELVALTGTVVYSITN 96

Query: 80  RLPFSAYGELVFLLVQAI-ILVAVIYYYSQLIDSASFLS 113
             PFS++GE +FL +Q + I   V++Y  + +   +FL+
Sbjct: 97  NFPFSSWGEALFLTLQTVAICFLVMHYRGETVKGVAFLA 135

[Close]

BLAST of Carg11863 vs. ExPASy TrEMBL
Match: A0A6J1HH49 (Mannose-P-dolichol utilization defect 1 protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111462888 PE=3 SV=1)

HSP 1 Score: 233.8 bits (595), Expect = 5.7e-58
Identity = 130/168 (77.38%), Postives = 133/168 (79.17%), Query Frame = 0


Query: 1   MDFTCVFGALNHGKFPEKDCLLPLISKLLGYCIVAASTT-----IMKILKHQSIRGLGVI 60
           MDFTCVFGALNHGKFPEKDCLLPLISKLLGYCIVAASTT     IMKILKHQSIRGLGVI
Sbjct: 1   MDFTCVFGALNHGKFPEKDCLLPLISKLLGYCIVAASTTVKLPQIMKILKHQSIRGLGVI 60

Query: 61  SFELEVVGYTIALAYCVHKRLPFSAYGELVFLLVQAIILVAVIYYYSQLIDSASFLSHAS 120
           SFELEVVGYTIALAYCVHKRLPFSAYGELVFLLVQAIILVAVIYYYSQLI   +++    
Sbjct: 61  SFELEVVGYTIALAYCVHKRLPFSAYGELVFLLVQAIILVAVIYYYSQLIGMKTWIR--- 120

Query: 121 IMRTFQLRSSCGETCNCLNTLPLRYCALAPTVLAGQINPALFEALYAS 164
                                 L YCALAPTVLAGQINPALFEALYAS
Sbjct: 121 ---------------------ALLYCALAPTVLAGQINPALFEALYAS 144

[Close]

BLAST of Carg11863 vs. ExPASy TrEMBL
Match: E5GB83 (Mannose-P-dolichol utilization defect 1 protein homolog OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1)

HSP 1 Score: 218.0 bits (554), Expect = 3.2e-53
Identity = 121/168 (72.02%), Postives = 128/168 (76.19%), Query Frame = 0


Query: 1   MDFTCVFGALNHGKFPEKDCLLPLISKLLGYCIVAASTT-----IMKILKHQSIRGLGVI 60
           MDF+CVFG+L+HGKFPEKDCLLPLISKLLGYCIVAASTT     IMKILKHQS+RGL VI
Sbjct: 6   MDFSCVFGSLSHGKFPEKDCLLPLISKLLGYCIVAASTTVKLPQIMKILKHQSVRGLSVI 65

Query: 61  SFELEVVGYTIALAYCVHKRLPFSAYGELVFLLVQAIILVAVIYYYSQLIDSASFLSHAS 120
           SFELEVVGYTIALAYCVHK LPFSAYGEL FLLVQAIILVAVIYYYSQ I   +++    
Sbjct: 66  SFELEVVGYTIALAYCVHKGLPFSAYGELAFLLVQAIILVAVIYYYSQPIGMKTWIR--- 125

Query: 121 IMRTFQLRSSCGETCNCLNTLPLRYCALAPTVLAGQINPALFEALYAS 164
                                 L YCALAPTVLAGQINP LFEALYAS
Sbjct: 126 ---------------------ALLYCALAPTVLAGQINPVLFEALYAS 149

[Close]

BLAST of Carg11863 vs. ExPASy TrEMBL
Match: A0A0A0LL56 (Mannose-P-dolichol utilization defect 1 protein homolog OS=Cucumis sativus OX=3659 GN=Csa_2G356080 PE=3 SV=1)

HSP 1 Score: 218.0 bits (554), Expect = 3.2e-53
Identity = 121/168 (72.02%), Postives = 128/168 (76.19%), Query Frame = 0


Query: 1   MDFTCVFGALNHGKFPEKDCLLPLISKLLGYCIVAASTT-----IMKILKHQSIRGLGVI 60
           MDF+CVFG+L+HGKFPEKDCLLPLISKLLGYCIVAASTT     IMKILKHQS+RGL VI
Sbjct: 6   MDFSCVFGSLSHGKFPEKDCLLPLISKLLGYCIVAASTTVKLPQIMKILKHQSVRGLSVI 65

Query: 61  SFELEVVGYTIALAYCVHKRLPFSAYGELVFLLVQAIILVAVIYYYSQLIDSASFLSHAS 120
           SFELEVVGYTIALAYCVHK LPFSAYGEL FLLVQAIILVAVIYYYSQ I   +++    
Sbjct: 66  SFELEVVGYTIALAYCVHKGLPFSAYGELAFLLVQAIILVAVIYYYSQPIGMKTWIR--- 125

Query: 121 IMRTFQLRSSCGETCNCLNTLPLRYCALAPTVLAGQINPALFEALYAS 164
                                 L YCALAPTVLAGQINP LFEALYAS
Sbjct: 126 ---------------------ALLYCALAPTVLAGQINPVLFEALYAS 149

[Close]

BLAST of Carg11863 vs. ExPASy TrEMBL
Match: A0A1S3BBF5 (Mannose-P-dolichol utilization defect 1 protein homolog OS=Cucumis melo OX=3656 GN=LOC103487866 PE=3 SV=1)

HSP 1 Score: 218.0 bits (554), Expect = 3.2e-53
Identity = 121/168 (72.02%), Postives = 128/168 (76.19%), Query Frame = 0


Query: 1   MDFTCVFGALNHGKFPEKDCLLPLISKLLGYCIVAASTT-----IMKILKHQSIRGLGVI 60
           MDF+CVFG+L+HGKFPEKDCLLPLISKLLGYCIVAASTT     IMKILKHQS+RGL VI
Sbjct: 6   MDFSCVFGSLSHGKFPEKDCLLPLISKLLGYCIVAASTTVKLPQIMKILKHQSVRGLSVI 65

Query: 61  SFELEVVGYTIALAYCVHKRLPFSAYGELVFLLVQAIILVAVIYYYSQLIDSASFLSHAS 120
           SFELEVVGYTIALAYCVHK LPFSAYGEL FLLVQAIILVAVIYYYSQ I   +++    
Sbjct: 66  SFELEVVGYTIALAYCVHKGLPFSAYGELAFLLVQAIILVAVIYYYSQPIGMKTWIR--- 125

Query: 121 IMRTFQLRSSCGETCNCLNTLPLRYCALAPTVLAGQINPALFEALYAS 164
                                 L YCALAPTVLAGQINP LFEALYAS
Sbjct: 126 ---------------------ALLYCALAPTVLAGQINPVLFEALYAS 149

[Close]

BLAST of Carg11863 vs. ExPASy TrEMBL
Match: A0A6J1BR33 (Mannose-P-dolichol utilization defect 1 protein homolog OS=Momordica charantia OX=3673 GN=LOC111004997 PE=3 SV=1)

HSP 1 Score: 214.5 bits (545), Expect = 3.6e-52
Identity = 117/168 (69.64%), Postives = 128/168 (76.19%), Query Frame = 0


Query: 1   MDFTCVFGALNHGKFPEKDCLLPLISKLLGYCIVAASTT-----IMKILKHQSIRGLGVI 60
           MDF+CV+G+L+HGKFPEKDCLLPLISKLLGYCI+AASTT     I+KILKHQS+RGL VI
Sbjct: 6   MDFSCVYGSLSHGKFPEKDCLLPLISKLLGYCIIAASTTVKLPQILKILKHQSVRGLSVI 65

Query: 61  SFELEVVGYTIALAYCVHKRLPFSAYGELVFLLVQAIILVAVIYYYSQLIDSASFLSHAS 120
           SFELEVVGYTIALAYCVHK LPFSAYGEL FLLVQAIILVAVIYYYSQ I   +++    
Sbjct: 66  SFELEVVGYTIALAYCVHKGLPFSAYGELAFLLVQAIILVAVIYYYSQPIGMTTWMR--- 125

Query: 121 IMRTFQLRSSCGETCNCLNTLPLRYCALAPTVLAGQINPALFEALYAS 164
                                 L YCA+APTVLAGQINP LFEALYAS
Sbjct: 126 ---------------------ALLYCAVAPTVLAGQINPVLFEALYAS 149

[Close]

BLAST of Carg11863 vs. TAIR 10
Match: AT4G07390.1 (Mannose-P-dolichol utilization defect 1 protein )

HSP 1 Score: 189.9 bits (481), Expect = 1.8e-48
Identity = 100/168 (59.52%), Postives = 122/168 (72.62%), Query Frame = 0


Query: 1   MDFTCVFGALNHGKFPEKDCLLPLISKLLGYCIVAASTT-----IMKILKHQSIRGLGVI 60
           +D +C  G+L +G FPEKDCLLPLISKLLGYC+VAAS T     IMKI++H+S+RGL V+
Sbjct: 6   IDMSCAIGSLRNGDFPEKDCLLPLISKLLGYCLVAASITVKLPQIMKIVQHKSVRGLSVV 65

Query: 61  SFELEVVGYTIALAYCVHKRLPFSAYGELVFLLVQAIILVAVIYYYSQLIDSASFLSHAS 120
           +FELEVVGYTI+LAYC+HK LPFSA+GE+ FLL+QA+ILVA IYYYSQ +   +++    
Sbjct: 66  AFELEVVGYTISLAYCLHKGLPFSAFGEMAFLLIQALILVACIYYYSQPVPVTTWIR--- 125

Query: 121 IMRTFQLRSSCGETCNCLNTLPLRYCALAPTVLAGQINPALFEALYAS 164
                                PL YCA+APTVLAGQINP LFEALYAS
Sbjct: 126 ---------------------PLLYCAVAPTVLAGQINPTLFEALYAS 149

[Close]

BLAST of Carg11863 vs. TAIR 10
Match: AT5G59470.1 (Mannose-P-dolichol utilization defect 1 protein )

HSP 1 Score: 163.3 bits (412), Expect = 1.8e-40
Identity = 92/174 (52.87%), Postives = 121/174 (69.54%), Query Frame = 0


Query: 1   MDFTCVFGALNHGKFPEKDCLLPLISKLLGYCIVAASTT-----IMKILKHQSIRGLGVI 60
           +D +C  G+L +G+FP KDCLLPLISKLLGY +VAAS T     IMKI+ ++S++GL V+
Sbjct: 6   IDLSCAIGSLRNGEFPAKDCLLPLISKLLGYFLVAASMTVKLPQIMKIVDNKSVKGLSVV 65

Query: 61  SFELEVVGYTIALAYCVHKRLPFSAYGELVFLLVQAIILVAVIYYYSQLIDSASFLSHAS 120
           +FELEV+GYTI+LAYC++K LPFSA+GEL FLL+QA+ILVA IYY+SQ +   +++    
Sbjct: 66  AFELEVIGYTISLAYCLNKDLPFSAFGELAFLLIQALILVACIYYFSQPLSVTTWVK--- 125

Query: 121 IMRTFQLRSSCGETCNCLNTLPLRYCALAPTVLAGQINPALFEALYAS--LIFL 168
                                 + Y A+APTV AG+I+P LFEALYAS  LIFL
Sbjct: 126 ---------------------AILYFAIAPTVFAGKIDPFLFEALYASKHLIFL 155

[Close]

BLAST of Carg11863 vs. TAIR 10
Match: AT5G59470.2 (Mannose-P-dolichol utilization defect 1 protein )

HSP 1 Score: 143.3 bits (360), Expect = 1.9e-34
Identity = 70/108 (64.81%), Postives = 91/108 (84.26%), Query Frame = 0


Query: 1   MDFTCVFGALNHGKFPEKDCLLPLISKLLGYCIVAASTT-----IMKILKHQSIRGLGVI 60
           +D +C  G+L +G+FP KDCLLPLISKLLGY +VAAS T     IMKI+ ++S++GL V+
Sbjct: 6   IDLSCAIGSLRNGEFPAKDCLLPLISKLLGYFLVAASMTVKLPQIMKIVDNKSVKGLSVV 65

Query: 61  SFELEVVGYTIALAYCVHKRLPFSAYGELVFLLVQAIILVAVIYYYSQ 104
           +FELEV+GYTI+LAYC++K LPFSA+GEL FLL+QA+ILVA IYY+SQ
Sbjct: 66  AFELEVIGYTISLAYCLNKDLPFSAFGELAFLLIQALILVACIYYFSQ 113

The following BLAST results are available for this feature:

BLAST of Carg11863 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7029325.1	4.5e-94	100.00	Mannose-P-dolichol utilization defect 1 protein-like 2, partial [Cucurbita argyr...	[more]
XP_022962459.1	1.2e-57	77.38	mannose-P-dolichol utilization defect 1 protein homolog 2-like [Cucurbita moscha...	[more]
KAG6598354.1	3.4e-57	76.79	Mannose-P-dolichol utilization defect 1 protein-like 2, partial [Cucurbita argyr...	[more]
XP_023545478.1	7.1e-55	75.00	mannose-P-dolichol utilization defect 1 protein homolog 2-like [Cucurbita pepo s...	[more]
XP_004142876.1	6.6e-53	72.02	mannose-P-dolichol utilization defect 1 protein homolog 2 [Cucumis sativus] >XP_...	[more]

BLAST of Carg11863 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8VY63	2.5e-47	59.52	Mannose-P-dolichol utilization defect 1 protein homolog 2 OS=Arabidopsis thalian...	[more]
Q9LTI3	2.5e-39	52.87	Mannose-P-dolichol utilization defect 1 protein homolog 1 OS=Arabidopsis thalian...	[more]
O75352	3.7e-06	38.38	Mannose-P-dolichol utilization defect 1 protein OS=Homo sapiens OX=9606 GN=MPDU1...	[more]
Q60441	4.8e-06	37.89	Mannose-P-dolichol utilization defect 1 protein OS=Cricetulus griseus OX=10029 G...	[more]
Q9R0Q9	5.4e-05	35.35	Mannose-P-dolichol utilization defect 1 protein OS=Mus musculus OX=10090 GN=Mpdu...	[more]

BLAST of Carg11863 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HH49	5.7e-58	77.38	Mannose-P-dolichol utilization defect 1 protein homolog OS=Cucurbita moschata OX...	[more]
E5GB83	3.2e-53	72.02	Mannose-P-dolichol utilization defect 1 protein homolog OS=Cucumis melo subsp. m...	[more]
A0A0A0LL56	3.2e-53	72.02	Mannose-P-dolichol utilization defect 1 protein homolog OS=Cucumis sativus OX=36...	[more]
A0A1S3BBF5	3.2e-53	72.02	Mannose-P-dolichol utilization defect 1 protein homolog OS=Cucumis melo OX=3656 ...	[more]
A0A6J1BR33	3.6e-52	69.64	Mannose-P-dolichol utilization defect 1 protein homolog OS=Momordica charantia O...	[more]

BLAST of Carg11863 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G07390.1	1.8e-48	59.52	Mannose-P-dolichol utilization defect 1 protein	[more]
AT5G59470.1	1.8e-40	52.87	Mannose-P-dolichol utilization defect 1 protein	[more]
AT5G59470.2	1.9e-34	64.81	Mannose-P-dolichol utilization defect 1 protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.20.1280.290		coord: 23..103 e-value: 4.0E-6 score: 28.9
None	No IPR available	PANTHER	PTHR12226:SF4	MANNOSE-P-DOLICHOL UTILIZATION DEFECT 1 PROTEIN HOMOLOG 1	coord: 1..111
IPR016817	Mannose-P-dolichol utilization defect 1 protein	PANTHER	PTHR12226	MANNOSE-P-DOLICHOL UTILIZATION DEFECT 1 LEC35 -RELATED	coord: 1..111

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg11863-RA	Carg11863-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane