Carg11762 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg11762
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionLate embryogenesis abundant protein
LocationCarg_Chr10: 6986987 .. 6987565 (-)
RNA-Seq ExpressionCarg11762
SyntenyCarg11762
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCGCTCTCAATCGGAAGCGACGGAACATTTGCATAGCCGTATTACTTTCCCTAATCCTGCTCGTAATCTTCATCCTCATCTTAGCATTTACAGTTTTCAAGCCCAAGCAGCCCACCATCACCGTCGATTCACTTTCTTTGCTCGATCTCAACATTTCTCTGGACGCTGCGAGGTTCCGCGTCGATCTGAATTTGACTCTGATTGTGCTACTCACCGTCGAGAATCCGAATAAGGTAGCCTTCCAACACTCCGATGGCACCGCCGTCGTGAGTTACAGAGGCGAAGAAGTCGCAGAAGCGCCGATTCCGTCTGGTCGGTTATCGGCCGACGGGACAGAGAAAATGAACCTAACGCTGACGATGATGGCGGACCGGCTACTAGCCAAGTCGGAGCTGTTATCCGATGTGCTCGCCGGTGAACTTCCGATCAGCACTTTCGCTCGGCTGCCCGGGAAAGTGATGGTGATCGGTGTTTTCAAGATTCGTGTTGTGGCATTGTCGTCTTGTGATCTCACCATCGACATTAGAAAGAGAAACGTTGAGGATCAGCGATGCAAATATCGGACTAAGCTCTAA

mRNA sequence

ATGGCCGCTCTCAATCGGAAGCGACGGAACATTTGCATAGCCGTATTACTTTCCCTAATCCTGCTCGTAATCTTCATCCTCATCTTAGCATTTACAGTTTTCAAGCCCAAGCAGCCCACCATCACCGTCGATTCACTTTCTTTGCTCGATCTCAACATTTCTCTGGACGCTGCGAGGTTCCGCGTCGATCTGAATTTGACTCTGATTGTGCTACTCACCGTCGAGAATCCGAATAAGGTAGCCTTCCAACACTCCGATGGCACCGCCGTCGTGAGTTACAGAGGCGAAGAAGTCGCAGAAGCGCCGATTCCGTCTGGTCGGTTATCGGCCGACGGGACAGAGAAAATGAACCTAACGCTGACGATGATGGCGGACCGGCTACTAGCCAAGTCGGAGCTGTTATCCGATGTGCTCGCCGGTGAACTTCCGATCAGCACTTTCGCTCGGCTGCCCGGGAAAGTGATGGTGATCGGTGTTTTCAAGATTCGTGTTGTGGCATTGTCGTCTTGTGATCTCACCATCGACATTAGAAAGAGAAACGTTGAGGATCAGCGATGCAAATATCGGACTAAGCTCTAA

Coding sequence (CDS)

ATGGCCGCTCTCAATCGGAAGCGACGGAACATTTGCATAGCCGTATTACTTTCCCTAATCCTGCTCGTAATCTTCATCCTCATCTTAGCATTTACAGTTTTCAAGCCCAAGCAGCCCACCATCACCGTCGATTCACTTTCTTTGCTCGATCTCAACATTTCTCTGGACGCTGCGAGGTTCCGCGTCGATCTGAATTTGACTCTGATTGTGCTACTCACCGTCGAGAATCCGAATAAGGTAGCCTTCCAACACTCCGATGGCACCGCCGTCGTGAGTTACAGAGGCGAAGAAGTCGCAGAAGCGCCGATTCCGTCTGGTCGGTTATCGGCCGACGGGACAGAGAAAATGAACCTAACGCTGACGATGATGGCGGACCGGCTACTAGCCAAGTCGGAGCTGTTATCCGATGTGCTCGCCGGTGAACTTCCGATCAGCACTTTCGCTCGGCTGCCCGGGAAAGTGATGGTGATCGGTGTTTTCAAGATTCGTGTTGTGGCATTGTCGTCTTGTGATCTCACCATCGACATTAGAAAGAGAAACGTTGAGGATCAGCGATGCAAATATCGGACTAAGCTCTAA

Protein sequence

MAALNRKRRNICIAVLLSLILLVIFILILAFTVFKPKQPTITVDSLSLLDLNISLDAARFRVDLNLTLIVLLTVENPNKVAFQHSDGTAVVSYRGEEVAEAPIPSGRLSADGTEKMNLTLTMMADRLLAKSELLSDVLAGELPISTFARLPGKVMVIGVFKIRVVALSSCDLTIDIRKRNVEDQRCKYRTKL
Homology
BLAST of Carg11762 vs. NCBI nr
Match: XP_022948127.1 (uncharacterized protein LOC111451800 [Cucurbita moschata] >KAG6605388.1 Late embryogenesis abundant protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7023930.1 hypothetical protein SDJN02_14958, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 351.7 bits (901), Expect = 4.1e-93
Identity = 192/192 (100.00%), Postives = 192/192 (100.00%), Query Frame = 0

Query: 1   MAALNRKRRNICIAVLLSLILLVIFILILAFTVFKPKQPTITVDSLSLLDLNISLDAARF 60
           MAALNRKRRNICIAVLLSLILLVIFILILAFTVFKPKQPTITVDSLSLLDLNISLDAARF
Sbjct: 1   MAALNRKRRNICIAVLLSLILLVIFILILAFTVFKPKQPTITVDSLSLLDLNISLDAARF 60

Query: 61  RVDLNLTLIVLLTVENPNKVAFQHSDGTAVVSYRGEEVAEAPIPSGRLSADGTEKMNLTL 120
           RVDLNLTLIVLLTVENPNKVAFQHSDGTAVVSYRGEEVAEAPIPSGRLSADGTEKMNLTL
Sbjct: 61  RVDLNLTLIVLLTVENPNKVAFQHSDGTAVVSYRGEEVAEAPIPSGRLSADGTEKMNLTL 120

Query: 121 TMMADRLLAKSELLSDVLAGELPISTFARLPGKVMVIGVFKIRVVALSSCDLTIDIRKRN 180
           TMMADRLLAKSELLSDVLAGELPISTFARLPGKVMVIGVFKIRVVALSSCDLTIDIRKRN
Sbjct: 121 TMMADRLLAKSELLSDVLAGELPISTFARLPGKVMVIGVFKIRVVALSSCDLTIDIRKRN 180

Query: 181 VEDQRCKYRTKL 193
           VEDQRCKYRTKL
Sbjct: 181 VEDQRCKYRTKL 192

BLAST of Carg11762 vs. NCBI nr
Match: XP_023534551.1 (uncharacterized protein LOC111796093 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 328.9 bits (842), Expect = 2.8e-86
Identity = 180/192 (93.75%), Postives = 185/192 (96.35%), Query Frame = 0

Query: 1   MAALNRKRRNICIAVLLSLILLVIFILILAFTVFKPKQPTITVDSLSLLDLNISLDAARF 60
           MAALNRKRRNICIAVLLSLILLVIFILILAFTVFKPKQPTITVDSLSLLDLNISL+AARF
Sbjct: 1   MAALNRKRRNICIAVLLSLILLVIFILILAFTVFKPKQPTITVDSLSLLDLNISLNAARF 60

Query: 61  RVDLNLTLIVLLTVENPNKVAFQHSDGTAVVSYRGEEVAEAPIPSGRLSADGTEKMNLTL 120
            VDLNLTLIV LT+ENPNKVAFQHSDGTAVVSYRGEEVAEAPIPSGRLSADGTEKMNLTL
Sbjct: 61  GVDLNLTLIVQLTLENPNKVAFQHSDGTAVVSYRGEEVAEAPIPSGRLSADGTEKMNLTL 120

Query: 121 TMMADRLLAKSELLSDVLAGELPISTFARLPGKVMVIGVFKIRVVALSSCDLTIDIRKRN 180
           TMMADR+LAKSEL SDVL GELPISTFARL GKV VIGVFKIRVVALSSCDLTI+IR RN
Sbjct: 121 TMMADRMLAKSELFSDVLTGELPISTFARLAGKVTVIGVFKIRVVALSSCDLTINIRNRN 180

Query: 181 VEDQRCKYRTKL 193
           VEDQRC+YRTKL
Sbjct: 181 VEDQRCEYRTKL 192

BLAST of Carg11762 vs. NCBI nr
Match: XP_023007254.1 (uncharacterized protein LOC111499794 [Cucurbita maxima])

HSP 1 Score: 323.9 bits (829), Expect = 9.1e-85
Identity = 177/192 (92.19%), Postives = 184/192 (95.83%), Query Frame = 0

Query: 1   MAALNRKRRNICIAVLLSLILLVIFILILAFTVFKPKQPTITVDSLSLLDLNISLDAARF 60
           MAALNRKRRNICIAVLLSLI+LVI ILILAFTVFKPKQPTITVDS+SLLDLNISL+AARF
Sbjct: 1   MAALNRKRRNICIAVLLSLIVLVILILILAFTVFKPKQPTITVDSVSLLDLNISLNAARF 60

Query: 61  RVDLNLTLIVLLTVENPNKVAFQHSDGTAVVSYRGEEVAEAPIPSGRLSADGTEKMNLTL 120
            VDLNLTLIV LTVENPNKVAFQHSDGTAVVSYRGEEVAEAPIPSGRLS DGTEKMNLTL
Sbjct: 61  GVDLNLTLIVQLTVENPNKVAFQHSDGTAVVSYRGEEVAEAPIPSGRLSPDGTEKMNLTL 120

Query: 121 TMMADRLLAKSELLSDVLAGELPISTFARLPGKVMVIGVFKIRVVALSSCDLTIDIRKRN 180
           TMMADRLLAKSEL SDV+AGELPISTFARL GK+ VIGVFKIRVVALSSCDLTIDIR R+
Sbjct: 121 TMMADRLLAKSELFSDVIAGELPISTFARLAGKMTVIGVFKIRVVALSSCDLTIDIRNRS 180

Query: 181 VEDQRCKYRTKL 193
           VEDQRC+YRTKL
Sbjct: 181 VEDQRCEYRTKL 192

BLAST of Carg11762 vs. NCBI nr
Match: XP_023512272.1 (uncharacterized protein LOC111777064 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 250.0 bits (637), Expect = 1.7e-62
Identity = 138/188 (73.40%), Postives = 159/188 (84.57%), Query Frame = 0

Query: 1   MAALNRKRRNICIAVLLSLILLVIFILILAFTVFKPKQPTITVDSLSLLDLNISLDAARF 60
           MAA +RK R+ICI VLLS+ LLVI ILILAFT FKPK+PTI VDS+SLLDLNISLDAAR 
Sbjct: 1   MAAPSRKLRSICIPVLLSVTLLVISILILAFTAFKPKRPTIAVDSVSLLDLNISLDAARL 60

Query: 61  RVDLNLTLIVLLTVENPNKVAFQHSDGTAVVSYRGEEVAEAPIPSGRLSADGTEKMNLTL 120
            VDLNL+L++ L+VENPNKVAF++S  TAVVSYRGEE+ EAPIP+GRL AD TEKMNLTL
Sbjct: 61  SVDLNLSLLLDLSVENPNKVAFEYSYSTAVVSYRGEELGEAPIPAGRLPADRTEKMNLTL 120

Query: 121 TMMADRLLAKSELLSDVLAGELPISTFARLPGKVMVIGVFKIRVVALSSCDLTIDIRKRN 180
           TMMADRLLAKSEL SD ++GE+PI+ F RL G V VIGVFKI VVA SSCD TI I  R+
Sbjct: 121 TMMADRLLAKSELFSDAISGEVPINIFTRLSGIVKVIGVFKIHVVASSSCDFTIGIGNRS 180

Query: 181 VEDQRCKY 189
           ++DQ+C Y
Sbjct: 181 IKDQKCHY 188

BLAST of Carg11762 vs. NCBI nr
Match: KAG7010478.1 (hypothetical protein SDJN02_27272, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 249.6 bits (636), Expect = 2.2e-62
Identity = 138/188 (73.40%), Postives = 159/188 (84.57%), Query Frame = 0

Query: 1   MAALNRKRRNICIAVLLSLILLVIFILILAFTVFKPKQPTITVDSLSLLDLNISLDAARF 60
           MAA +RK R+ICI VLLS+ LL+I ILILAFT FKPK+PTI VDS+SLLDLNISLDAAR 
Sbjct: 1   MAAPSRKLRSICIPVLLSVTLLIISILILAFTAFKPKRPTIAVDSVSLLDLNISLDAARL 60

Query: 61  RVDLNLTLIVLLTVENPNKVAFQHSDGTAVVSYRGEEVAEAPIPSGRLSADGTEKMNLTL 120
            VDLNL+L++ L+VENPNKVAF++S  TAVVSYRGEE+ EAPIP+G L AD TEKMNLTL
Sbjct: 61  SVDLNLSLLLDLSVENPNKVAFEYSYSTAVVSYRGEELGEAPIPAGWLPADRTEKMNLTL 120

Query: 121 TMMADRLLAKSELLSDVLAGELPISTFARLPGKVMVIGVFKIRVVALSSCDLTIDIRKRN 180
           TMMADRLLAKSEL SD ++GE+PI+ F RL G V VIGVFKI VVA SSCDLTI I  R+
Sbjct: 121 TMMADRLLAKSELFSDAISGEVPINIFTRLSGIVKVIGVFKIHVVASSSCDLTIGIGNRS 180

Query: 181 VEDQRCKY 189
           +EDQ+C Y
Sbjct: 181 IEDQKCHY 188

BLAST of Carg11762 vs. ExPASy TrEMBL
Match: A0A6J1G8C1 (uncharacterized protein LOC111451800 OS=Cucurbita moschata OX=3662 GN=LOC111451800 PE=4 SV=1)

HSP 1 Score: 351.7 bits (901), Expect = 2.0e-93
Identity = 192/192 (100.00%), Postives = 192/192 (100.00%), Query Frame = 0

Query: 1   MAALNRKRRNICIAVLLSLILLVIFILILAFTVFKPKQPTITVDSLSLLDLNISLDAARF 60
           MAALNRKRRNICIAVLLSLILLVIFILILAFTVFKPKQPTITVDSLSLLDLNISLDAARF
Sbjct: 1   MAALNRKRRNICIAVLLSLILLVIFILILAFTVFKPKQPTITVDSLSLLDLNISLDAARF 60

Query: 61  RVDLNLTLIVLLTVENPNKVAFQHSDGTAVVSYRGEEVAEAPIPSGRLSADGTEKMNLTL 120
           RVDLNLTLIVLLTVENPNKVAFQHSDGTAVVSYRGEEVAEAPIPSGRLSADGTEKMNLTL
Sbjct: 61  RVDLNLTLIVLLTVENPNKVAFQHSDGTAVVSYRGEEVAEAPIPSGRLSADGTEKMNLTL 120

Query: 121 TMMADRLLAKSELLSDVLAGELPISTFARLPGKVMVIGVFKIRVVALSSCDLTIDIRKRN 180
           TMMADRLLAKSELLSDVLAGELPISTFARLPGKVMVIGVFKIRVVALSSCDLTIDIRKRN
Sbjct: 121 TMMADRLLAKSELLSDVLAGELPISTFARLPGKVMVIGVFKIRVVALSSCDLTIDIRKRN 180

Query: 181 VEDQRCKYRTKL 193
           VEDQRCKYRTKL
Sbjct: 181 VEDQRCKYRTKL 192

BLAST of Carg11762 vs. ExPASy TrEMBL
Match: A0A6J1L4F9 (uncharacterized protein LOC111499794 OS=Cucurbita maxima OX=3661 GN=LOC111499794 PE=4 SV=1)

HSP 1 Score: 323.9 bits (829), Expect = 4.4e-85
Identity = 177/192 (92.19%), Postives = 184/192 (95.83%), Query Frame = 0

Query: 1   MAALNRKRRNICIAVLLSLILLVIFILILAFTVFKPKQPTITVDSLSLLDLNISLDAARF 60
           MAALNRKRRNICIAVLLSLI+LVI ILILAFTVFKPKQPTITVDS+SLLDLNISL+AARF
Sbjct: 1   MAALNRKRRNICIAVLLSLIVLVILILILAFTVFKPKQPTITVDSVSLLDLNISLNAARF 60

Query: 61  RVDLNLTLIVLLTVENPNKVAFQHSDGTAVVSYRGEEVAEAPIPSGRLSADGTEKMNLTL 120
            VDLNLTLIV LTVENPNKVAFQHSDGTAVVSYRGEEVAEAPIPSGRLS DGTEKMNLTL
Sbjct: 61  GVDLNLTLIVQLTVENPNKVAFQHSDGTAVVSYRGEEVAEAPIPSGRLSPDGTEKMNLTL 120

Query: 121 TMMADRLLAKSELLSDVLAGELPISTFARLPGKVMVIGVFKIRVVALSSCDLTIDIRKRN 180
           TMMADRLLAKSEL SDV+AGELPISTFARL GK+ VIGVFKIRVVALSSCDLTIDIR R+
Sbjct: 121 TMMADRLLAKSELFSDVIAGELPISTFARLAGKMTVIGVFKIRVVALSSCDLTIDIRNRS 180

Query: 181 VEDQRCKYRTKL 193
           VEDQRC+YRTKL
Sbjct: 181 VEDQRCEYRTKL 192

BLAST of Carg11762 vs. ExPASy TrEMBL
Match: A0A6J1FYG9 (uncharacterized protein LOC111448649 OS=Cucurbita moschata OX=3662 GN=LOC111448649 PE=4 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 2.4e-62
Identity = 137/188 (72.87%), Postives = 159/188 (84.57%), Query Frame = 0

Query: 1   MAALNRKRRNICIAVLLSLILLVIFILILAFTVFKPKQPTITVDSLSLLDLNISLDAARF 60
           MAA +RK R+ICI VLLS+ LL+I ILILAFT FKPK+PTI VDS+SLLDLNISLDAAR 
Sbjct: 1   MAAPSRKLRSICIPVLLSVTLLIISILILAFTAFKPKRPTIAVDSVSLLDLNISLDAARL 60

Query: 61  RVDLNLTLIVLLTVENPNKVAFQHSDGTAVVSYRGEEVAEAPIPSGRLSADGTEKMNLTL 120
            VDLNL+L++ L++ENPNKVAF++S  TAVVSYRGEE+ EAPIP+G L AD TEKMNLTL
Sbjct: 61  SVDLNLSLLLDLSIENPNKVAFEYSYTTAVVSYRGEELGEAPIPAGWLPADRTEKMNLTL 120

Query: 121 TMMADRLLAKSELLSDVLAGELPISTFARLPGKVMVIGVFKIRVVALSSCDLTIDIRKRN 180
           TMMADRLLAKSEL SD ++GE+PI+ F RL G V VIGVFKI VVA SSCDLTI I  R+
Sbjct: 121 TMMADRLLAKSELFSDAISGEVPINIFTRLSGIVKVIGVFKIHVVASSSCDLTIGIGNRS 180

Query: 181 VEDQRCKY 189
           +EDQ+C Y
Sbjct: 181 IEDQKCHY 188

BLAST of Carg11762 vs. ExPASy TrEMBL
Match: A0A6J1JFV2 (uncharacterized protein LOC111484029 OS=Cucurbita maxima OX=3661 GN=LOC111484029 PE=4 SV=1)

HSP 1 Score: 246.1 bits (627), Expect = 1.2e-61
Identity = 137/188 (72.87%), Postives = 156/188 (82.98%), Query Frame = 0

Query: 1   MAALNRKRRNICIAVLLSLILLVIFILILAFTVFKPKQPTITVDSLSLLDLNISLDAARF 60
           M A +RK R+ICI VLLS+ LLVI ILILAFT FKPK+PTI VDS+SLLDLNISLDAAR 
Sbjct: 1   MVAPSRKLRSICIPVLLSVTLLVISILILAFTAFKPKRPTIAVDSVSLLDLNISLDAARL 60

Query: 61  RVDLNLTLIVLLTVENPNKVAFQHSDGTAVVSYRGEEVAEAPIPSGRLSADGTEKMNLTL 120
            VDLNL L++ L+VENPNKVAF++S  TAVVSYRGEE+ E PIP+GRL AD TEKMNLTL
Sbjct: 61  SVDLNLFLLLDLSVENPNKVAFEYSYSTAVVSYRGEELGEVPIPAGRLLADRTEKMNLTL 120

Query: 121 TMMADRLLAKSELLSDVLAGELPISTFARLPGKVMVIGVFKIRVVALSSCDLTIDIRKRN 180
            MMADRLLAKSEL SD ++GE+PI+ F RL G V VIGVFKI VVA SSCDLTI I  R+
Sbjct: 121 KMMADRLLAKSELFSDAMSGEVPINIFTRLSGIVKVIGVFKIHVVASSSCDLTIGIGNRS 180

Query: 181 VEDQRCKY 189
           +EDQ+C Y
Sbjct: 181 IEDQKCHY 188

BLAST of Carg11762 vs. ExPASy TrEMBL
Match: A0A0A0KBX8 (LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G212910 PE=4 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 1.2e-53
Identity = 120/183 (65.57%), Postives = 146/183 (79.78%), Query Frame = 0

Query: 10  NICIAVLLSLILLVIFILILAFTVFKPKQPTITVDSLSLLDLNISLDAARFRVDLNLTLI 69
           NIC+ + LSLILL++F LILAFTVFKPKQP I VDS+SLLDLN+S+      V L+L+L 
Sbjct: 12  NICLTLFLSLILLLLFSLILAFTVFKPKQPIIVVDSVSLLDLNVSITDG---VHLSLSLN 71

Query: 70  VLLTVENPNKVAFQHSDGTAVVSYRGEEVAEAPIPSGRLSADGTEKMNLTLTMMADRLLA 129
           V LTV+NPNKV F++S+ TAVV YRGE+V EAPIP GRL   GTEKMNLTLT+M DR+L 
Sbjct: 72  VDLTVQNPNKVGFEYSESTAVVIYRGEKVGEAPIPGGRLPGKGTEKMNLTLTIMGDRMLG 131

Query: 130 KSELLSDVLAGELPISTFARLPGKVMVIGVFKIRVVALSSCDLTIDIRKRNVEDQRCKYR 189
           KSE+ SDV++G+LPISTFARLPGKV V+ V KI VVA +SCDL ID++  +  DQ C+YR
Sbjct: 132 KSEVFSDVVSGQLPISTFARLPGKVKVMNVLKIHVVASTSCDLIIDVKNESFGDQLCQYR 191

Query: 190 TKL 193
           T L
Sbjct: 192 TTL 191

BLAST of Carg11762 vs. TAIR 10
Match: AT3G54200.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 178.3 bits (451), Expect = 5.8e-45
Identity = 96/191 (50.26%), Postives = 143/191 (74.87%), Query Frame = 0

Query: 4   LNRKRR-NICIAVLLSLILLV-IFILILAFTVFKPKQPTITVDSLSLLDLNISLDAARFR 63
           L RKR   ICI   + LILL+ I I+ILAFT+FKPK+PT T+DS+++  L  S++    +
Sbjct: 45  LRRKRNCKICICFTILLILLIAIVIVILAFTLFKPKRPTTTIDSVTVDRLQASVNPLLLK 104

Query: 64  VDLNLTLIVLLTVENPNKVAFQHSDGTAVVSYRGEEVAEAPIPSGRLSADGTEKMNLTLT 123
           V LNLTL V L+++NPN++ F +   +A+++YRG+ + EAP+P+ R++A  T  +N+TLT
Sbjct: 105 VLLNLTLNVDLSLKNPNRIGFSYDSSSALLNYRGQVIGEAPLPANRIAARKTVPLNITLT 164

Query: 124 MMADRLLAKSELLSDVLAGELPISTFARLPGKVMVIGVFKIRVVALSSCDLTIDIRKRNV 183
           +MADRLL++++LLSDV+AG +P++TF ++ GKV V+ +FKI+V + SSCDL+I +  RNV
Sbjct: 165 LMADRLLSETQLLSDVMAGVIPLNTFVKVTGKVTVLKIFKIKVQSSSSCDLSISVSDRNV 224

Query: 184 EDQRCKYRTKL 193
             Q CKY TKL
Sbjct: 225 TSQHCKYSTKL 235

BLAST of Carg11762 vs. TAIR 10
Match: AT3G05975.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 97.1 bits (240), Expect = 1.7e-20
Identity = 72/194 (37.11%), Postives = 109/194 (56.19%), Query Frame = 0

Query: 7   KRRNICIAVLLSLILLVIFI--LILAFTVFKPKQPTI-----TVDSLSLLDLNISLDAAR 66
           KRR  CI   +  +L VIF+  LILA  VFKPK P +     TVD +S    NISL    
Sbjct: 3   KRRICCIVSGIIFVLFVIFMTALILA-QVFKPKHPILQTVSSTVDGIS---TNISLP--- 62

Query: 67  FRVDLNLTLIVLLTVENPNKVAFQHSDGTAVVSYRGEEVAEAPIPSGRLSADGTEKMNLT 126
           + V LN TL + + ++NPN   F++     +V YR   V    +PS  L A G+  +   
Sbjct: 63  YEVQLNFTLTLEMLLKNPNVADFEYKTVENLVYYRDTLVGNLTLPSSTLPAKGSVLLPCP 122

Query: 127 LTMMADRLLAK-SELLSDVLAGELPISTFARLPGKVMVIGVFKIRVVALSSCDLTIDIRK 186
           L +  D+ +A   +++ DVL G++ + T A++PGK+ ++G+FKI + ++S C+L +    
Sbjct: 123 LFLQLDKFVANLGDIVQDVLHGKIVMETRAKMPGKITLLGIFKIPLDSISHCNLVLGFPS 182

Query: 187 RNVEDQRCKYRTKL 193
             VEDQ C  +TKL
Sbjct: 183 MVVEDQVCDLKTKL 189

BLAST of Carg11762 vs. TAIR 10
Match: AT2G46150.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 81.6 bits (200), Expect = 7.3e-16
Identity = 54/190 (28.42%), Postives = 106/190 (55.79%), Query Frame = 0

Query: 5   NRKRRNICIAVLLSLILLVIFILILAFTVFKPKQPTITVDSLSLLDLNISLDAARFR-VD 64
           +R R    I V  + ++L   +L L FTVF+ K P I ++ + +  L+      + + + 
Sbjct: 32  SRNRIKCSICVTATSLILTTIVLTLVFTVFRVKDPIIKMNGVMVNGLDSVTGTNQVQLLG 91

Query: 65  LNLTLIVLLTVENPNKVAFQHSDGTAVVSYRGEEVAEAPIPSGRLSADGTEKMNLTLTMM 124
            N+++IV ++V+NPN  +F++S+ T  + Y+G  V EA    G+     T +MN+T+ +M
Sbjct: 92  TNISMIVDVSVKNPNTASFKYSNTTTDIYYKGTLVGEAHGLPGKARPHRTSRMNVTVDIM 151

Query: 125 ADRLLAKSELLSDV-LAGELPISTFARLPGKVMVIGVFKIRVVALSSCDLTIDIRKRNVE 184
            DR+L+   L  ++  +G + + ++ R+ GKV ++G+ K  V    +C + ++I  + ++
Sbjct: 152 LDRILSDPGLGREISRSGLVNVWSYTRVGGKVKIMGIVKKHVTVKMNCTMAVNITGQAIQ 211

Query: 185 DQRCKYRTKL 193
           D  CK +  L
Sbjct: 212 DVDCKKKIDL 221

BLAST of Carg11762 vs. TAIR 10
Match: AT4G23930.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 62.4 bits (150), Expect = 4.6e-10
Identity = 46/183 (25.14%), Postives = 83/183 (45.36%), Query Frame = 0

Query: 12  CIAVLLSLILLVIFILILAFTVFKPKQPTITVDSLSLLDLNISLDAARFRVDLNLTLIVL 71
           C    L ++ L+I  L +  TVF+P+ P I+V S+ +   +++  +  F      T    
Sbjct: 11  CAVATLFIVFLIIAALTVYLTVFRPRDPEISVTSVKVPSFSVANSSVSF------TFSQF 70

Query: 72  LTVENPNKVAFQHSDGTAVVSYRGEEVAEAPIPSGRLSADGTEKMNLTLTMMADRLLAKS 131
             V NPN+ AF H +    + Y G  +    +P+G + +  T++M  T ++ +  L A S
Sbjct: 71  SAVRNPNRAAFSHYNNVIQLFYYGNRIGYTFVPAGEIESGRTKRMLATFSVQSFPLAAAS 130

Query: 132 ELL--------SDVLAGELPISTFARLPGKVMVIGVFKIRVVALSSCDLTIDIRKRNVED 187
                      SD     + I +   + G+V V+G+F  R+ A  +C + I     ++  
Sbjct: 131 SSQISAAQFQNSDRSGSTVEIESKLEMAGRVRVLGLFTHRIAAKCNCRIAISSSDGSIVA 187

BLAST of Carg11762 vs. TAIR 10
Match: AT1G64450.1 (Glycine-rich protein family )

HSP 1 Score: 57.4 bits (137), Expect = 1.5e-08
Identity = 42/142 (29.58%), Postives = 73/142 (51.41%), Query Frame = 0

Query: 12  CIAVLLSLILLVIFILILAFTVFKPKQPTITVDSLSLLDLNISLDAARFRVDLNLTLIVL 71
           C    + L++L++ +L++ FTVFKPK P I+V+++ L    +S + A      N +    
Sbjct: 19  CAVATVFLLILLVVLLVVYFTVFKPKDPKISVNAVQLPSFAVSNNTA------NFSFSQY 78

Query: 72  LTVENPNKVAFQHSDGTAVVSYRGEEVAEAPIPSGRLSADGTEKMNLTLTMMADRLL-AK 131
           + V NPN+  F H D +  + Y G +V    IP+G++ +   + M  T T+ +  +    
Sbjct: 79  VAVRNPNRAVFSHYDSSIQLLYSGNQVGFMFIPAGKIDSGRIQYMAATFTVHSFPISPPS 138

Query: 132 SELLSDVLAGELPISTFARLPG 153
           S  +S V A  +P S    +PG
Sbjct: 139 SSAISTVSAAVIPDSPI--IPG 152

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022948127.14.1e-93100.00uncharacterized protein LOC111451800 [Cucurbita moschata] >KAG6605388.1 Late emb... [more]
XP_023534551.12.8e-8693.75uncharacterized protein LOC111796093 [Cucurbita pepo subsp. pepo][more]
XP_023007254.19.1e-8592.19uncharacterized protein LOC111499794 [Cucurbita maxima][more]
XP_023512272.11.7e-6273.40uncharacterized protein LOC111777064 [Cucurbita pepo subsp. pepo][more]
KAG7010478.12.2e-6273.40hypothetical protein SDJN02_27272, partial [Cucurbita argyrosperma subsp. argyro... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1G8C12.0e-93100.00uncharacterized protein LOC111451800 OS=Cucurbita moschata OX=3662 GN=LOC1114518... [more]
A0A6J1L4F94.4e-8592.19uncharacterized protein LOC111499794 OS=Cucurbita maxima OX=3661 GN=LOC111499794... [more]
A0A6J1FYG92.4e-6272.87uncharacterized protein LOC111448649 OS=Cucurbita moschata OX=3662 GN=LOC1114486... [more]
A0A6J1JFV21.2e-6172.87uncharacterized protein LOC111484029 OS=Cucurbita maxima OX=3661 GN=LOC111484029... [more]
A0A0A0KBX81.2e-5365.57LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G212910 PE=4 ... [more]
Match NameE-valueIdentityDescription
AT3G54200.15.8e-4550.26Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family [more]
AT3G05975.11.7e-2037.11Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family [more]
AT2G46150.17.3e-1628.42Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family [more]
AT4G23930.14.6e-1025.14Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family [more]
AT1G64450.11.5e-0829.58Glycine-rich protein family [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004864Late embryogenesis abundant protein, LEA_2 subgroupPFAMPF03168LEA_2coord: 72..162
e-value: 2.2E-9
score: 37.8
NoneNo IPR availableGENE3D2.60.40.1820coord: 27..174
e-value: 7.4E-12
score: 47.3
NoneNo IPR availablePANTHERPTHR31852:SF122LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILYcoord: 5..191
NoneNo IPR availablePANTHERPTHR31852LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILYcoord: 5..191
NoneNo IPR availableSUPERFAMILY117070LEA14-likecoord: 20..128

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg11762-RACarg11762-RAmRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane