Carg11721 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg11721
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	CCR4-NOT transcription complex subunit 11
Location	Carg_Chr02: 3708066 .. 3717153 (+)
RNA-Seq Expression	Carg11721
Synteny	Carg11721

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAGCGAAGCTTATATAAGTTGAAGATTTGCAAGAACAACAATTTTGTGCAGAGAGCATTTGATCGACAACCAACCTGCATTCATGTTTAAAATGGCGAACACCGAATTCAAGTGGGGAAGTATGAAGATGACCCTCACGGTTGATGAATCCCGAACGCTCTACTCTTTGCTAGCAGGAGGGGATGAACGCCCGTTTCTGGACATCATCGCCGATTTTACATCCAAGATCCCTCGCACTCGTCAATTTATTGCCTGTTATTCCCTCGCTATTCTCTTGGAGGTCATTCAATCCCTATCCATGTTTTCTCCTCATCATTTTCTGTTATGATTTGTTCTGATTTACACATGTTTACGTCCGAGTTTAGGGCCATGCTTTATCTGCAAATCTTGTTTCTTCTTCGTCTTCGTTTACATGGCCTGCCGTTTCGTTATGTTTTTTGTTCTAGGCCTTGGTTTTTCTTTGTTTGCCCGGTTGTTCTCCTCGGTGCGTGATTTGAAGTCAGGCATCTCCTCATTTGTCCCCTTCTTAAAAATTTATGATTCTAACCTGCAATTACTAGATTCTCCGTCACCAACCTTGAAAACCCACTATGGATGTATTACCTAAATCGATGAAATTGTGGCTACTGAAACTGTTATATATGTATACATATACACATTTACATTGGGTCTGTTTCGAGGCCAAAGAAACGGCGTCAAAATATTTCTTCAATCTCCATTCGATAATTATACCAATTTGTTTCGATTCGGGTCATCTTGATAACATTTGTTTTTATAATGCATTTGACTTTCTTTAAAGAAAATAAAACATTTACGTGTGGCTGAAGATTTTGTTTACTGAGTTCAGTACATGCGATTGGTATCTTAAATCGTCAATGCTTTTCACTCTGTCGAGTTAATCAATGTGTAGGATTTTTTCTCTTTTTTTTTGTCATTTTTAATTTAATCTTAGATATTTGGGGTCTTCACTTCCATATGTAGTTTCGGCATGCGGTTCTTTTTAAGAATGTCTGTAGCACTGCTCTTTCTTGCAATGTTTGGTATTAGAATTCTGTTTTTTTCTTTTTGGTAGTTTTATCGTTAGTATGGAAGTCTTTTCTTCTATAATGAGTGGTTTGGGGTTTTCCCTTTTGTAATTTCGTTCATCAATAAAATGGTGTTCTCTTTCCTAAAGAAAAATGTTATTTCTTTTTGGTGTTTTTCTTCCATATTCAACTGTTTGAACTCTTAAGCCGATTGGAACACGGTCTTGATTCCTACTATAGAATTTATCATACCTGTTTCGATAGTGAAGGTTAGATTTCCGTACCTTTGTTGTGTCTGTTCCCAATCGTTTCCTTATCTTTTGCATGAAATCCTTTTATGATGAAGGATTGACTCTTTTTGTGCTTATTGATTACTGATTAATGGATCTAAAATGCAGCCAAAGAAGTTGCTTCATGCCACACAACGTTTAGTGGGATTTTCTATTCTTCACCAGGCATATTCCTCGCAAAAATCTTCTTCTAATCCGTTTATATCTTTTATTGTACACGTAAGTATGCTACCTAATGACTTAGTAACGAGACATGTTAGAGTTTTTGTTCTCTTTACAATTCGACTAAAAGTTAAATGTCATTCAGTTGCATATGGATGTTCATGTTTTACAATTTAGTTTTTGCTAAATGTCAGCAGCCTGACACCACTGTGTAATGTATGCTATCGAGGAACTTACTATTGGATTGGAGTCCTTTTTGTAGCTTTGTAGTTCTTGTTAACCTTTCTTCTTGATCCATTTATTTATTATTATTTTTTTTTTTGTATTGCCCTTGTGTATTATTCTCAATAAAAATTGGCTTCTTTATTAAAAAAAAAAAGGCTATCTTTTCATAGTTCTCTATTATGTGCCTCACAAAAAAAGCCCTTACATTCTTTGTGCTTTGCACTTAAGCCTGTAAGGTCTAGTCCTCATTTTTTTGTAGTGCGGCTCATGTTTTAAAAAAAAGACTGGGTGAGGTTGCTTCTTTTACTTTAGCCTCCATTGAACTGCCCCTTGGGATTGATTGCGGCACTGATTACTTTACATTAGTCTTTTTATCAGTATGTCAGTGAAGACAATTGATTAATTTGCACTTCTCTATCAACTATGAAAAAGAAGCCAGTAATGAAGCAAGAAAGTTGCGAAGGCATTGGTGGCTGTGTGAGAGACCTTTGAGTTTTTCTGTAGGTCTTTGGGGAAGGACTGGAGTGAAGTAAGGGGATGTGTGGGTGTGACTCAAGCAGCAGGATGGTAGATTGTCATAGGAAACGTAAGAGGAAGACTATTTGTTAGAACACATATTCCTTCACTGCCCTTTCGCCTTCAGGGGATGGATCTTTACTTTTGAAGAGCTTGGCCTCCCGTTTTGTTTTTTGAATATAGTGGAAGTTTGGCTGTTAGAAGCTTTGATGGGTGTAAGCTTCAAGGCAATTAGAAGCTTTGATTTTGGTAATTATAGTCTTGCCTTTCTATGATTATTACAAACTGGAAAGCCTTTCTATGATAGTTTACTTTTGGGAGGGGTTTCCTTCTACCCTCTGCCCTTAGGCTGTCCTCTTTTGTGTTCTTCATATGCTTATCAGACAAATTTCATAGAAAAAAGAAAGGAGATCTGTTATAGCTGGGTACAGTGTCATGGGTGACGGATGCTTGACAGGATTGCTCTTTAGTTCAGGAAGGCGTGGCAGATCTTTAGGAGAAGGTGTCTCTCAGAGGCTCTGGTGTGGGGTTAGGTAGTGCCTAATGCTAGAAATAGACACTATGGTAGCTCTAGATTTTTCCATGAGTGCAGGTCTTCTCATTTCTTAAACAGGTATTATGGGAAGCTGCTGCACTGATTATGAAGCTTTTAGAGTGTGGCAGGGGTGCTTTTAGGCTATGGGATTGGTTTGTTTCCCTGGAGTGTTATGATGATTTCTGAAAATAGAATATTGTTGTTTTTGAGAGGGTGCGTAAGGGCGATTAATTTGCCTCCACATTTGCGTTTGTTTGATTTGGCTAGTAAGTTGGGAGAAAATTGAAAGAAGCCACTTCACAAATCCTTTCTTTATTACAATTTGGAGTTTTCAAGACCCTTTCAAGTATTCAGATATTGAACCTTAATCTCTCACAAATGCTAAAAAGTGCAAATTCAGAACTGAGAGCGTTGTATGGTATGGATTTCGGGAACCAAGTTCCATGAATATCTTTTAGATCCTGAATTGCACTCTCTCCATCAATCTCTCCTATTGAACAAACATTTTTTCTCCATTCCCTTCATCTCCCTCTCCCCTGACCTCCCTAATTGAGGGCCTATTATCCACTTGTGTAGCTGCTGAGCTTCACTGTTGATTTTTATTTTTTCTAGTACCTCCATCATATTTTTTTTATTCTATGTAAAATCATTTCAATTTTAAAATATTAACAATGGCAATATTTTAGAAGTGATTTGCAATGATTATCGATTGCTTTCAATTTCTCAATCCCATTTCATGGGTTTTAGCAAAAAGAAATTATTTCTACAAGATGGACTTACAAAGAAATTTTCATTGCTATCTGAATAAGGTTAATTTTAGAAACTTGAGTTTTTCTGCTTCGTATTCTGGGTGTCAGGCTGCTTCTGACGAGGAAGCTGAAAATTGTGAGAGGGCATTTATTTTCCAGCTTTTAGCATCAGACAGCTCCAGTGATGGCAAAGAGGTACAACTTCTAATTAATTACATTGATTTTAATTGGCCATTTTGCATATTTTTAATTGTTTATTATAATTTCTTGTGCTTTTTTGGTTTGGAAGATTTTGTGCTATTAAATCATAGAAACTGTGTAGTTATGAGGAACCATAACTGGATTAAAATTGTTGATGGTTATTGGCAACATCCTATTTGTATGCGTTGAAATTTTGTTCTTTATGGTGAGTTAATTTCCCCAACCTTTCCATGAGGAATCAGAACTTAGTCCCCTTTCAGTTTGTTCTATCCCTAGATTTGGGGTTGGGATTTGGTTTTACTATTGGAGGCCTCACTGCCCATTAGTTCTTTTCCTTCCTCTTTGTGAGTTTATGGTTCTAAATAAAAAATTAAATATCTGCATAAATTGCCGATACTATTCACAGAGAACAGATATATGAACATGATCTCGGAGCCAAAAAACAAAACAAAAAATAAAATAAAAAGGAAGAAAAAGAAGAATAAGAAGAAACAAGAAGAGGAAACATAACTTTTTGTGGAGTATGTGATAAATTTCAAGTTTAATTGGAAAATGACAATAGAAACAAATTTAAAAACCTCACCCACCAAAGAACCCAAAGTTACATTTATTCTCCGTACAGTGGCAGAACAAATTGCATGTATACTTATAGGAATATTTGCGGACAAAAATGAGTTGCAGAGGATTCCTGGCTAGTCACAGCTCATATGCCAAACGATGTTTTATTTTATTAATTCTCCAATAACTTGGTACAAGAGGGAAGTCCTACTTTTATATTTATAGGTAAGGTTAGGGGTAAAAAGGCTTAGTTACAATAATACTTCACAATAGTAAAGTAAATTACTCTACTAACTAATCCTAAAAAACTCATCAAAATAAACCAAGATAATTTCAAATAAAACCTCTAATTATCCTACATCAATCCCTCTCCTAGAGAAAAATTTGTCAACGAGGAGGATAATTTCTTGTCCAGAGGTTAATGGGTAGGCAGATGTAAACAACACATTTGAGATGTTGAGATCAAGCGATGTTTTGACAATATAGGCATTTTCTGTTACTCAGTTCATGAATCGACAATGACCAATTGCCCTCTTTTTTTCATTTAGCTTGTCATATGTACCTATGGGAAACCTGTTCTTTTCTGAAATGTACCTTGTCTTGTATCTTCTTGATTTGATCGGGTTCTGCTTCAACATCAAGATCTAAACTTTTTGAACTAGAGAAATACATTAGGTGAATAGTTAAATGAGGAAATTTAGTATACACTATCTTAAAAGATATGTTGCACATAGATCTATTCTTCAATTTGAATGCAAGTTCAACTTGTGGGGGAGCCTGATGCCATTCTTCAGCATGCCACCACCAAGTCATTGAATTTAATTTTTTTGATGTCCTAGTCTCACACCTCAGTTTGACCATTAGTTTAAGGGTGGGTGACACGTTGTATTGTATTTTAATGGTCAACTATAAGTTTGTTTCAATATAGCTCCTTATTTATTAACAATTTTCAATTTAGCTCCTCACAGCTGTTAGTGTTAAAATTGGTTGGTTCTCCTTTCAAGGGACAAGCCTTCATTCTGTGGACTAATGCAGTTTATGCAAATTTATGGAGGCTTTGGTTTGAAAGGAACCAAAGAGTTTTTAAGGGACTCGAGGCCAACTTTATTGGCTTTTGGGATTTATTTGTGGTCTTTACTTCTACTTGTTGTACCCTTTCGAAGGGGTTCTGTAATTATAGTCTTCGAATATTTTTGCCGACCGGGGCCTTTTTATCGTAATCCGGTGGCTTTTTGGGGATAGTCCATTCTCCTTGTGAAGTCCCACATTGGTTGGGGAGGAGAACAAACCACCATTTATAAGAGTGTGGAAACCTTCTCCTAGCAGACGCGTTTTAAAGCCTTGAGGGGAAGCCCGAAAGGGAAAGCCCAAAGAGAACAATATTTGCTAGCGGTGGATCTGGGTCGTTACACTCCTTTTATGAGCAATTTTGATCTTAGTCTCGTTTCTTTTTTTTTAAAAAAACTACCTGACATAATATTTATTGGAAAGTAGGAAGAATTAGAAGCTTTCCTCTTTTAGATGATATTTTCCTCTAAATTTTTGTCAATTCATCATGTATTATGTGATGTAAATTTCGTGCAAGTCAATTATAACATTCACTAACTATCCGAAGCTAAATTGAAAAATTTTGAAGCATAAAGAATTAAATTTGAACTTTTATTTAAACCATAGCCACTAATGAACCAATACCCAGATATTAGGGAATTAAATTTACATTTTGTCTAACATTAACTGCCCACCAATTTAATGTTAACAAAGCTGTCATACGTTGACTTTAGACCAGGAAGTTGTTAAATAATATAATATCAATGATAAGTTTGCAACTAATGATTTCTTTGTAGATAACACTCATTGTACTGCCTTAAATTGGCGTAAATGCTCCCCCCTTCTAACTATAGTCTTTCTACCTTAGTCACTAATTGGAATTATGTTTTGTAATCCGCCCATGGTGGTGGGGTTCTTCCATTTCTTTCATATTCTTGTCCTTTATATCATTTCTCAATGAAATCTATCCTTTACTAGAAAAAATGTATCAACTACATTTTTTTGTTATTCTAGACTTATGCTTGATGGAAAAAATAAAATCTTTGTATAAATGCTTCACCTAGCTTGCATGTAAATTTGGTCTCGCAAAGACTGGTGATCATCTAACAAATAATATTCCCATTGTTTTAAGGCTCATACTTAGCCCCAAATACACCTCTTGATTAAACGTGCTCTATTTATTTATTTATTTTGTTTTATGGCTAAGACTGGATAGTGGTTAGCTTGTCGTTTAGTGACTTAAAACTGTTCTATCATTCCTCTTTTTTCTTTTTTTTTTTTTTTTTTTTAATACACTCATTAAGGGGAGCTGCTATGGCCCTTCTGAATGAACTTTCTTTAGGGCATCCTTTTCTTTATTCTATCTTTTTGTATTATAATGGATAATGGATTTCAGAGAAATGACATATTATTGCTAAAAAAGAAAGCCTCAGTCTCCTATCAAACCCATGTGAAGATGAATCTTGTGCTCTACTTCTAGACTTCAACCTTTTCAAAGTGAACTTCCAGCGTAGTATGTTTTCTGTTGCACTTTGTTTCCTATCAAACCCTTGTGAAGATGTGTCTTGTGCTGTACATCTAGACTTCGACCTTTTCAAAGTGAACTTCCAGCGTAGTATGCTTTCTGTTGCATTTTGTTCAGTTTATACCTAGTACTGTTGTACTAATCTTATTTTAGTATATAGTTACATGCCTATGCCAATTTCCATGTATATAATTCTCCTTGTATAACTCATGATGGGGATGTCGGTCTTGCAGTTCCTGAAAAAGTCTGCCTCAGATTACATTGTACATTTCGATCCTTCATTGCATGTAAGACAATGAAACCAACCTGAACGTAATCTGACTTTTAATTTGTCTATAGGAAAACCATCAAGAGCTCTGCCCACAAGTTCTATTGTGGGAAGAATCAAATTGTAATATATATTTAATGCCAAAGGTTTGTTTTATTCAGGCTTTACCTAAGCGAGAGCAGTTGCAACAACAGTTTTGTGATGAACTCCAAGCTCAATCGTTTGATTGCTTTTCTAAAGATGCTTCTGTGAGAAATGTGGTCCCAGACCCTGATGTCCCACGGGGTTGTGATGCAAATTCTGTGGAGTAAGAGTTCTCGTATCAATGATCTATGTGTTGAGCTTAATCTAGCTTCTGCACTATTTTGTTATTTATATGATGTTGGACATCTTAGGTTTGACCAGCAACCTGGAGTTGTACCTAAAGTGGGATCTGGAGAAAAAGATGTGGTGGGGTTATTGTCTAATGTATCACCTCGAGGATCAAGTCCTGAGTGGATTAGGCCTCCTCCACCAAGGCTTCCGACACAGAATGGAGAGGTGAGATACATTTTAACTGTCTCCTTTATAGTTAATGTATTTAGTCTAGAGCAGACCTGATTTATACCTGGCAAAGCCCCTTTACAGTTAGTGTGGTTGAACGTTGACGATGACCACGAACTTTCATGGGACCACGAAATATGTGTTGATAGTAGTAGAGGTGCCGCTGCTAGGGACTTAATTGCAAAAGCTGTGAAGGGCCCTCTTATACCTGCTGAACACGAGGTTCAAATACTTCTGCAGTTACTTTGTTATCACGTGAATTTTTTTTCCTTGCATAATGAATGCCAAAGGATGAAATGACTCATTGTTGTTCTTTGGTTGACCAGCAAGCGGTGGAGGAGTTGGAAAATGACCCAAAGCTTGTATATCATTGTGGACTGACACCCAGAAAACTACCTGTATGTGTTTTTGAATCATATCATGATTTCACCGAAAAAGAAGTTCTGCCTCATCTTTGTAAATCTTTTTCTTATCAATAGGAACTGGTGGAAAACAATCCTCTAGTTGCAGTTGAAGTTCTAAAGAAATTGATTAATTCCCCTGAAATTGCCGAGTATGGATTGTAATCCTTGTGTTGAATTATTTTATTGTGCATGTCCTGAGATACTGTCGTTCTTTCCTTCTTTTTTTTTTTTTTTTCTTTTTTTCCTGTACTCATTCCCACACCTTTCGTTGCAGGTATTTTCATGTGCTTGTTAACATGGACATGAGTTTACACTCTATGGAAGTTGTCAACAGGCTAACGACAGCTGTTGAACTTCCCTCTGAGTTCATACACATGTACATCAGTAATTGTATATCATCATGTGAGAACATTAAGGTACGTATCTGTACTATACTTCCTGAGTTTACAACATTTGGTAGTTGAGGACTCCTATTGTGTGCTTGTTTTCTTGGATGCCCGCGTATTTTCTTTCGTTTTTCTTAATGAGCTTGTTTTCTTACCCAAAAGAAAGAAGAAAAGTTACACAGCATTGGAGGCTTTAAGTTCTTATTGTCTTGTATGGCCCTTGAAGACACGTACACTTCTATGAACTTACTCTTGTTTGAATTTTTGGTTCCTATGAACTCAACCGTCATTAGTATTTTATGTTTTCTTAAGTTTTGGGTTTTGTTTTCTGAATTTTAGTTTTAACATGTGTAAGGTATGGAACATTTTTAATTGTTGTTATTATGCCACAGGACAAGTACATGCAGAACAGATTAGTTCGACTTGTATGTGTTTTTCTACAGAGTCTGATTCGGAATAACATCATCAATGGTAAGTTCCTGTCATATGCCTCTGCTTGAATTAAATTGTTGGTTGATAATTTTGAGTATTTGGTGGTGGTGTTGTTGGTTGCAGTGAAAGATCTTTTCATCGAAGTTCAAGCTTTCTGCATCGAATTCTCTCGCATTAGAGAAGCGGCGGCGTTATTCAGGCTTCTTAAATCTTTGGAATGA

mRNA sequence

AAAGCGAAGCTTATATAAGTTGAAGATTTGCAAGAACAACAATTTTGTGCAGAGAGCATTTGATCGACAACCAACCTGCATTCATGTTTAAAATGGCGAACACCGAATTCAAGTGGGGAAGTATGAAGATGACCCTCACGGTTGATGAATCCCGAACGCTCTACTCTTTGCTAGCAGGAGGGGATGAACGCCCGTTTCTGGACATCATCGCCGATTTTACATCCAAGATCCCTCGCACTCGTCAATTTATTGCCTGTTATTCCCTCGCTATTCTCTTGGAGGCTGCTTCTGACGAGGAAGCTGAAAATTGTGAGAGGGCATTTATTTTCCAGCTTTTAGCATCAGACAGCTCCAGTGATGGCAAAGAGTTCCTGAAAAAGTCTGCCTCAGATTACATTGTACATTTCGATCCTTCATTGCATGCTTTACCTAAGCGAGAGCAGTTGCAACAACAGTTTTGTGATGAACTCCAAGCTCAATCGTTTGATTGCTTTTCTAAAGATGCTTCTGTGAGAAATGTGGTCCCAGACCCTGATGTCCCACGGGGTTGTGATGCAAATTCTGTGGAGTTTGACCAGCAACCTGGAGTTGTACCTAAAGTGGGATCTGGAGAAAAAGATGTGGTGGGGTTATTGTCTAATGTATCACCTCGAGGATCAAGTCCTGAGTGGATTAGGCCTCCTCCACCAAGGCTTCCGACACAGAATGGAGAGTTAGTGTGGTTGAACGTTGACGATGACCACGAACTTTCATGGGACCACGAAATATGTGTTGATAGTAGTAGAGGTGCCGCTGCTAGGGACTTAATTGCAAAAGCTGTGAAGGGCCCTCTTATACCTGCTGAACACGAGCAAGCGGTGGAGGAGTTGGAAAATGACCCAAAGCTTGTATATCATTGTGGACTGACACCCAGAAAACTACCTGAACTGGTGGAAAACAATCCTCTAGTTGCAGTTGAAGTTCTAAAGAAATTGATTAATTCCCCTGAAATTGCCGAGTATTTTCATGTGCTTGTTAACATGGACATGAGTTTACACTCTATGGAAGTTGTCAACAGGCTAACGACAGCTGTTGAACTTCCCTCTGAGTTCATACACATGTACATCAGTAATTGTATATCATCATGTGAGAACATTAAGGACAAGTACATGCAGAACAGATTAGTTCGACTTGTATGTGTTTTTCTACAGAGTCTGATTCGGAATAACATCATCAATGTGAAAGATCTTTTCATCGAAGTTCAAGCTTTCTGCATCGAATTCTCTCGCATTAGAGAAGCGGCGGCGTTATTCAGGCTTCTTAAATCTTTGGAATGA

Coding sequence (CDS)

ATGTTTAAAATGGCGAACACCGAATTCAAGTGGGGAAGTATGAAGATGACCCTCACGGTTGATGAATCCCGAACGCTCTACTCTTTGCTAGCAGGAGGGGATGAACGCCCGTTTCTGGACATCATCGCCGATTTTACATCCAAGATCCCTCGCACTCGTCAATTTATTGCCTGTTATTCCCTCGCTATTCTCTTGGAGGCTGCTTCTGACGAGGAAGCTGAAAATTGTGAGAGGGCATTTATTTTCCAGCTTTTAGCATCAGACAGCTCCAGTGATGGCAAAGAGTTCCTGAAAAAGTCTGCCTCAGATTACATTGTACATTTCGATCCTTCATTGCATGCTTTACCTAAGCGAGAGCAGTTGCAACAACAGTTTTGTGATGAACTCCAAGCTCAATCGTTTGATTGCTTTTCTAAAGATGCTTCTGTGAGAAATGTGGTCCCAGACCCTGATGTCCCACGGGGTTGTGATGCAAATTCTGTGGAGTTTGACCAGCAACCTGGAGTTGTACCTAAAGTGGGATCTGGAGAAAAAGATGTGGTGGGGTTATTGTCTAATGTATCACCTCGAGGATCAAGTCCTGAGTGGATTAGGCCTCCTCCACCAAGGCTTCCGACACAGAATGGAGAGTTAGTGTGGTTGAACGTTGACGATGACCACGAACTTTCATGGGACCACGAAATATGTGTTGATAGTAGTAGAGGTGCCGCTGCTAGGGACTTAATTGCAAAAGCTGTGAAGGGCCCTCTTATACCTGCTGAACACGAGCAAGCGGTGGAGGAGTTGGAAAATGACCCAAAGCTTGTATATCATTGTGGACTGACACCCAGAAAACTACCTGAACTGGTGGAAAACAATCCTCTAGTTGCAGTTGAAGTTCTAAAGAAATTGATTAATTCCCCTGAAATTGCCGAGTATTTTCATGTGCTTGTTAACATGGACATGAGTTTACACTCTATGGAAGTTGTCAACAGGCTAACGACAGCTGTTGAACTTCCCTCTGAGTTCATACACATGTACATCAGTAATTGTATATCATCATGTGAGAACATTAAGGACAAGTACATGCAGAACAGATTAGTTCGACTTGTATGTGTTTTTCTACAGAGTCTGATTCGGAATAACATCATCAATGTGAAAGATCTTTTCATCGAAGTTCAAGCTTTCTGCATCGAATTCTCTCGCATTAGAGAAGCGGCGGCGTTATTCAGGCTTCTTAAATCTTTGGAATGA

Protein sequence

MFKMANTEFKWGSMKMTLTVDESRTLYSLLAGGDERPFLDIIADFTSKIPRTRQFIACYSLAILLEAASDEEAENCERAFIFQLLASDSSSDGKEFLKKSASDYIVHFDPSLHALPKREQLQQQFCDELQAQSFDCFSKDASVRNVVPDPDVPRGCDANSVEFDQQPGVVPKVGSGEKDVVGLLSNVSPRGSSPEWIRPPPPRLPTQNGELVWLNVDDDHELSWDHEICVDSSRGAAARDLIAKAVKGPLIPAEHEQAVEELENDPKLVYHCGLTPRKLPELVENNPLVAVEVLKKLINSPEIAEYFHVLVNMDMSLHSMEVVNRLTTAVELPSEFIHMYISNCISSCENIKDKYMQNRLVRLVCVFLQSLIRNNIINVKDLFIEVQAFCIEFSRIREAAALFRLLKSLE

Homology

[Close]

BLAST of Carg11721 vs. NCBI nr
Match: KAG7035303.1 (CCR4-NOT transcription complex subunit 11 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 816.2 bits (2107), Expect = 1.2e-232
Identity = 410/410 (100.00%), Postives = 410/410 (100.00%), Query Frame = 0


Query: 1   MFKMANTEFKWGSMKMTLTVDESRTLYSLLAGGDERPFLDIIADFTSKIPRTRQFIACYS 60
           MFKMANTEFKWGSMKMTLTVDESRTLYSLLAGGDERPFLDIIADFTSKIPRTRQFIACYS
Sbjct: 1   MFKMANTEFKWGSMKMTLTVDESRTLYSLLAGGDERPFLDIIADFTSKIPRTRQFIACYS 60

Query: 61  LAILLEAASDEEAENCERAFIFQLLASDSSSDGKEFLKKSASDYIVHFDPSLHALPKREQ 120
           LAILLEAASDEEAENCERAFIFQLLASDSSSDGKEFLKKSASDYIVHFDPSLHALPKREQ
Sbjct: 61  LAILLEAASDEEAENCERAFIFQLLASDSSSDGKEFLKKSASDYIVHFDPSLHALPKREQ 120

Query: 121 LQQQFCDELQAQSFDCFSKDASVRNVVPDPDVPRGCDANSVEFDQQPGVVPKVGSGEKDV 180
           LQQQFCDELQAQSFDCFSKDASVRNVVPDPDVPRGCDANSVEFDQQPGVVPKVGSGEKDV
Sbjct: 121 LQQQFCDELQAQSFDCFSKDASVRNVVPDPDVPRGCDANSVEFDQQPGVVPKVGSGEKDV 180

Query: 181 VGLLSNVSPRGSSPEWIRPPPPRLPTQNGELVWLNVDDDHELSWDHEICVDSSRGAAARD 240
           VGLLSNVSPRGSSPEWIRPPPPRLPTQNGELVWLNVDDDHELSWDHEICVDSSRGAAARD
Sbjct: 181 VGLLSNVSPRGSSPEWIRPPPPRLPTQNGELVWLNVDDDHELSWDHEICVDSSRGAAARD 240

Query: 241 LIAKAVKGPLIPAEHEQAVEELENDPKLVYHCGLTPRKLPELVENNPLVAVEVLKKLINS 300
           LIAKAVKGPLIPAEHEQAVEELENDPKLVYHCGLTPRKLPELVENNPLVAVEVLKKLINS
Sbjct: 241 LIAKAVKGPLIPAEHEQAVEELENDPKLVYHCGLTPRKLPELVENNPLVAVEVLKKLINS 300

Query: 301 PEIAEYFHVLVNMDMSLHSMEVVNRLTTAVELPSEFIHMYISNCISSCENIKDKYMQNRL 360
           PEIAEYFHVLVNMDMSLHSMEVVNRLTTAVELPSEFIHMYISNCISSCENIKDKYMQNRL
Sbjct: 301 PEIAEYFHVLVNMDMSLHSMEVVNRLTTAVELPSEFIHMYISNCISSCENIKDKYMQNRL 360

Query: 361 VRLVCVFLQSLIRNNIINVKDLFIEVQAFCIEFSRIREAAALFRLLKSLE 411
           VRLVCVFLQSLIRNNIINVKDLFIEVQAFCIEFSRIREAAALFRLLKSLE
Sbjct: 361 VRLVCVFLQSLIRNNIINVKDLFIEVQAFCIEFSRIREAAALFRLLKSLE 410

[Close]

BLAST of Carg11721 vs. NCBI nr
Match: XP_022947019.1 (CCR4-NOT transcription complex subunit 11-like [Cucurbita moschata])

HSP 1 Score: 797.7 bits (2059), Expect = 4.6e-227
Identity = 410/447 (91.72%), Postives = 410/447 (91.72%), Query Frame = 0


Query: 1   MFKMANTEFKWGSMKMTLTVDESRTLYSLLAGGDERPFLDIIADFTSKIPRTRQFIACYS 60
           MFKMANTEFKWGSMKMTLTVDESRTLYSLLAGGDERPFLDIIADFTSKIPRTRQFIACYS
Sbjct: 1   MFKMANTEFKWGSMKMTLTVDESRTLYSLLAGGDERPFLDIIADFTSKIPRTRQFIACYS 60

Query: 61  LAILLE-------------------------------------AASDEEAENCERAFIFQ 120
           LAILLE                                     AASDEEAENCERAFIFQ
Sbjct: 61  LAILLEPKKLLHATQRLVGFSILHQAYSSQKSSSNPFISFIVHAASDEEAENCERAFIFQ 120

Query: 121 LLASDSSSDGKEFLKKSASDYIVHFDPSLHALPKREQLQQQFCDELQAQSFDCFSKDASV 180
           LLASDSSSDGKEFLKKSASDYIVHFDPSLHALPKREQLQQQFCDELQAQSFDCFSKDASV
Sbjct: 121 LLASDSSSDGKEFLKKSASDYIVHFDPSLHALPKREQLQQQFCDELQAQSFDCFSKDASV 180

Query: 181 RNVVPDPDVPRGCDANSVEFDQQPGVVPKVGSGEKDVVGLLSNVSPRGSSPEWIRPPPPR 240
           RNVVPDPDVPRGCDANSVEFDQQPGVVPKVGSGEKDVVGLLSNVSPRGSSPEWIRPPPPR
Sbjct: 181 RNVVPDPDVPRGCDANSVEFDQQPGVVPKVGSGEKDVVGLLSNVSPRGSSPEWIRPPPPR 240

Query: 241 LPTQNGELVWLNVDDDHELSWDHEICVDSSRGAAARDLIAKAVKGPLIPAEHEQAVEELE 300
           LPTQNGELVWLNVDDDHELSWDHEICVDSSRGAAARDLIAKAVKGPLIPAEHEQAVEELE
Sbjct: 241 LPTQNGELVWLNVDDDHELSWDHEICVDSSRGAAARDLIAKAVKGPLIPAEHEQAVEELE 300

Query: 301 NDPKLVYHCGLTPRKLPELVENNPLVAVEVLKKLINSPEIAEYFHVLVNMDMSLHSMEVV 360
           NDPKLVYHCGLTPRKLPELVENNPLVAVEVLKKLINSPEIAEYFHVLVNMDMSLHSMEVV
Sbjct: 301 NDPKLVYHCGLTPRKLPELVENNPLVAVEVLKKLINSPEIAEYFHVLVNMDMSLHSMEVV 360

Query: 361 NRLTTAVELPSEFIHMYISNCISSCENIKDKYMQNRLVRLVCVFLQSLIRNNIINVKDLF 411
           NRLTTAVELPSEFIHMYISNCISSCENIKDKYMQNRLVRLVCVFLQSLIRNNIINVKDLF
Sbjct: 361 NRLTTAVELPSEFIHMYISNCISSCENIKDKYMQNRLVRLVCVFLQSLIRNNIINVKDLF 420

[Close]

BLAST of Carg11721 vs. NCBI nr
Match: XP_023007169.1 (CCR4-NOT transcription complex subunit 11-like [Cucurbita maxima])

HSP 1 Score: 790.4 bits (2040), Expect = 7.3e-225
Identity = 406/447 (90.83%), Postives = 408/447 (91.28%), Query Frame = 0


Query: 1   MFKMANTEFKWGSMKMTLTVDESRTLYSLLAGGDERPFLDIIADFTSKIPRTRQFIACYS 60
           MFKMAN EFKWGSMKMTLTVDESRTLYSLLAGGDERPFLDIIADFTSKIPRTRQFIACYS
Sbjct: 1   MFKMANNEFKWGSMKMTLTVDESRTLYSLLAGGDERPFLDIIADFTSKIPRTRQFIACYS 60

Query: 61  LAILLE-------------------------------------AASDEEAENCERAFIFQ 120
           LAILLE                                     AASDEEAENCERAFIFQ
Sbjct: 61  LAILLEPKKLLHATQRLVGFSILHQTYSSQKSSSNPFISFIVHAASDEEAENCERAFIFQ 120

Query: 121 LLASDSSSDGKEFLKKSASDYIVHFDPSLHALPKREQLQQQFCDELQAQSFDCFSKDASV 180
           LLASDSSSDGKEFLKKSASDYIVHFDPSLHALPKREQLQQQFCDE+QAQSFD FSKDASV
Sbjct: 121 LLASDSSSDGKEFLKKSASDYIVHFDPSLHALPKREQLQQQFCDEIQAQSFDFFSKDASV 180

Query: 181 RNVVPDPDVPRGCDANSVEFDQQPGVVPKVGSGEKDVVGLLSNVSPRGSSPEWIRPPPPR 240
           RNVVPDPDVPRGCDANSVEFDQQPG+VPKVGSGEKDVVGLLSNVSPRGSSPEWIRPPPPR
Sbjct: 181 RNVVPDPDVPRGCDANSVEFDQQPGIVPKVGSGEKDVVGLLSNVSPRGSSPEWIRPPPPR 240

Query: 241 LPTQNGELVWLNVDDDHELSWDHEICVDSSRGAAARDLIAKAVKGPLIPAEHEQAVEELE 300
           LPTQNGELVWLNVDDDHELSWDHEICVDSSRGAAARDLIAKAVKGPLIPAEHEQAVEELE
Sbjct: 241 LPTQNGELVWLNVDDDHELSWDHEICVDSSRGAAARDLIAKAVKGPLIPAEHEQAVEELE 300

Query: 301 NDPKLVYHCGLTPRKLPELVENNPLVAVEVLKKLINSPEIAEYFHVLVNMDMSLHSMEVV 360
           NDPKLVYHCGLTPRKLPELVENNPLVAVEVLKKLINSPEIAEYFHVLVNMDMSLHSMEVV
Sbjct: 301 NDPKLVYHCGLTPRKLPELVENNPLVAVEVLKKLINSPEIAEYFHVLVNMDMSLHSMEVV 360

Query: 361 NRLTTAVELPSEFIHMYISNCISSCENIKDKYMQNRLVRLVCVFLQSLIRNNIINVKDLF 411
           NRLTTAVELPSEFIHMYISNCISSCENIKDKYMQNRLVRLVCVFLQSLIRNNIINVKDLF
Sbjct: 361 NRLTTAVELPSEFIHMYISNCISSCENIKDKYMQNRLVRLVCVFLQSLIRNNIINVKDLF 420

[Close]

BLAST of Carg11721 vs. NCBI nr
Match: XP_023532661.1 (CCR4-NOT transcription complex subunit 11-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 785.0 bits (2026), Expect = 3.1e-223
Identity = 406/447 (90.83%), Postives = 406/447 (90.83%), Query Frame = 0


Query: 1   MFKMANTEFKWGSMKMTLTVDESRTLYSLLAGGDERPFLDIIADFTSKIPRTRQFIACYS 60
           MFKMAN EFKWGSMKMTLTVDESRTLYSLLAGGDERPFLDIIADFTSKIPRTRQFIACYS
Sbjct: 1   MFKMANNEFKWGSMKMTLTVDESRTLYSLLAGGDERPFLDIIADFTSKIPRTRQFIACYS 60

Query: 61  LAILLE-------------------------------------AASDEEAENCERAFIFQ 120
           LAILLE                                     AASDEEAENCERAFIFQ
Sbjct: 61  LAILLEPKKLLHATQRLVGFSILHQTYSSQKSSSNPFISFIVHAASDEEAENCERAFIFQ 120

Query: 121 LLASDSSSDGKEFLKKSASDYIVHFDPSLHALPKREQLQQQFCDELQAQSFDCFSKDASV 180
           LLASDSSSDGKEFLKKSASDYIVHFDPS HALPKREQLQQQF DELQAQSFDCFSKDASV
Sbjct: 121 LLASDSSSDGKEFLKKSASDYIVHFDPSSHALPKREQLQQQFYDELQAQSFDCFSKDASV 180

Query: 181 RNVVPDPDVPRGCDANSVEFDQQPGVVPKVGSGEKDVVGLLSNVSPRGSSPEWIRPPPPR 240
           RNVVPDPDVPRG DANSVEFDQQPGVVPKVGSGEKDVVGLLSNVSPRGSSPEWIRPPPPR
Sbjct: 181 RNVVPDPDVPRGFDANSVEFDQQPGVVPKVGSGEKDVVGLLSNVSPRGSSPEWIRPPPPR 240

Query: 241 LPTQNGELVWLNVDDDHELSWDHEICVDSSRGAAARDLIAKAVKGPLIPAEHEQAVEELE 300
           LPTQNGELVWLNVDDDHELSWDHEICVDSSRGAAARDLIAKAVKGPLIPAEHEQAVEELE
Sbjct: 241 LPTQNGELVWLNVDDDHELSWDHEICVDSSRGAAARDLIAKAVKGPLIPAEHEQAVEELE 300

Query: 301 NDPKLVYHCGLTPRKLPELVENNPLVAVEVLKKLINSPEIAEYFHVLVNMDMSLHSMEVV 360
           NDPKLVYHCGLTPRKLPELVENNPLVAVEVLKKLINSPEIAEYFHVLVNMDMSLHSMEVV
Sbjct: 301 NDPKLVYHCGLTPRKLPELVENNPLVAVEVLKKLINSPEIAEYFHVLVNMDMSLHSMEVV 360

Query: 361 NRLTTAVELPSEFIHMYISNCISSCENIKDKYMQNRLVRLVCVFLQSLIRNNIINVKDLF 411
           NRLTTAVELPSEFIHMYISNCISSCENIKDKYMQNRLVRLVCVFLQSLIRNNIINVKDLF
Sbjct: 361 NRLTTAVELPSEFIHMYISNCISSCENIKDKYMQNRLVRLVCVFLQSLIRNNIINVKDLF 420

[Close]

BLAST of Carg11721 vs. NCBI nr
Match: KAG6605345.1 (CCR4-NOT transcription complex subunit 11, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 765.8 bits (1976), Expect = 1.9e-217
Identity = 396/434 (91.24%), Postives = 396/434 (91.24%), Query Frame = 0


Query: 14  MKMTLTVDESRTLYSLLAGGDERPFLDIIADFTSKIPRTRQFIACYSLAILLE------- 73
           MKMTLTVDESRTLYSLLAGGDERPFLDIIADFTSKIPRTRQFIACYSLAILLE       
Sbjct: 1   MKMTLTVDESRTLYSLLAGGDERPFLDIIADFTSKIPRTRQFIACYSLAILLEPKKLLHA 60

Query: 74  ------------------------------AASDEEAENCERAFIFQLLASDSSSDGKEF 133
                                         AASDEEAENCERAFIFQLLASDSSSDGKEF
Sbjct: 61  TQRLVGFSILHQAYSSQKSSSNPFISFIVHAASDEEAENCERAFIFQLLASDSSSDGKEF 120

Query: 134 LKKSASDYIVHFDPSLHALPKREQLQQQFCDELQAQSFDCFSKDASVRNVVPDPDVPRGC 193
           LKKSASDYIVHFDPSLHALPKREQLQQQFCDELQAQSFDCFSKDASVRNVVPDPDVPRG 
Sbjct: 121 LKKSASDYIVHFDPSLHALPKREQLQQQFCDELQAQSFDCFSKDASVRNVVPDPDVPRGG 180

Query: 194 DANSVEFDQQPGVVPKVGSGEKDVVGLLSNVSPRGSSPEWIRPPPPRLPTQNGELVWLNV 253
           DANSVEFDQQPGVVPKVGSGEKDVVGLLSNVSPRGSSPEWIRPPPPRLPTQNGELVWLNV
Sbjct: 181 DANSVEFDQQPGVVPKVGSGEKDVVGLLSNVSPRGSSPEWIRPPPPRLPTQNGELVWLNV 240

Query: 254 DDDHELSWDHEICVDSSRGAAARDLIAKAVKGPLIPAEHEQAVEELENDPKLVYHCGLTP 313
           DDDHELSWDHEICVDSSRGAAARDLIAKAVKGPLIPAEHEQAVEELENDPKLVYHCGLTP
Sbjct: 241 DDDHELSWDHEICVDSSRGAAARDLIAKAVKGPLIPAEHEQAVEELENDPKLVYHCGLTP 300

Query: 314 RKLPELVENNPLVAVEVLKKLINSPEIAEYFHVLVNMDMSLHSMEVVNRLTTAVELPSEF 373
           RKLPELVENNPLVAVEVLKKLINSPEIAEYFHVLVNMDMSLHSMEVVNRLTTAVELPSEF
Sbjct: 301 RKLPELVENNPLVAVEVLKKLINSPEIAEYFHVLVNMDMSLHSMEVVNRLTTAVELPSEF 360

Query: 374 IHMYISNCISSCENIKDKYMQNRLVRLVCVFLQSLIRNNIINVKDLFIEVQAFCIEFSRI 411
           IHMYISNCISSCENIKDKYMQNRLVRLVCVFLQSLIRNNIINVKDLFIEVQAFCIEFSRI
Sbjct: 361 IHMYISNCISSCENIKDKYMQNRLVRLVCVFLQSLIRNNIINVKDLFIEVQAFCIEFSRI 420

[Close]

BLAST of Carg11721 vs. ExPASy Swiss-Prot
Match: Q9UKZ1 (CCR4-NOT transcription complex subunit 11 OS=Homo sapiens OX=9606 GN=CNOT11 PE=1 SV=1)

HSP 1 Score: 302.8 bits (774), Expect = 6.1e-81
Identity = 167/273 (61.17%), Postives = 197/273 (72.16%), Query Frame = 0


Query: 141 ASVRNVVPDPDVPRGCDANSVEFDQQPG--VVPKVGSGEKDVVGLLSNVSPRGSSPEWIR 200
           AS  +++ DPD     D+++  FD      +   + SG K  +            PE+IR
Sbjct: 238 ASFPSILSDPDP----DSSNSGFDSSVASQITEALVSGPKPPI-------ESHFRPEFIR 297

Query: 201 PPPPRLPTQNGELVWLN-VDDDHELSWDHEICVDSSRGAAARDLIAKAVKGPLIPAEHEQ 260
           PPPP L     EL WLN  + DH + WD  +CV +S G   + ++AKA K PL   +  Q
Sbjct: 298 PPPP-LHICEDELAWLNPTEPDHAIQWDKSMCVKNSTGVEIKRIMAKAFKSPLSSPQQTQ 357

Query: 261 AVEELENDPKLVYHCGLTPRKLPELVENNPLVAVEVLKKLINSPEIAEYFHVLVNMDMSL 320
            + ELE DPKLVYH GLTP KLP+LVENNPLVA+E+L KL+ S +I EYF VLVNMDMSL
Sbjct: 358 LLGELEKDPKLVYHIGLTPAKLPDLVENNPLVAIEMLLKLMQSSQITEYFSVLVNMDMSL 417

Query: 321 HSMEVVNRLTTAVELPSEFIHMYISNCISSCENIKDKYMQNRLVRLVCVFLQSLIRNNII 380
           HSMEVVNRLTTAV+LP EFIH+YISNCIS+CE IKDKYMQNRLVRLVCVFLQSLIRN II
Sbjct: 418 HSMEVVNRLTTAVDLPPEFIHLYISNCISTCEQIKDKYMQNRLVRLVCVFLQSLIRNKII 477

Query: 381 NVKDLFIEVQAFCIEFSRIREAAALFRLLKSLE 411
           NV+DLFIEVQAFCIEFSRIREAA LFRLLK+L+
Sbjct: 478 NVQDLFIEVQAFCIEFSRIREAAGLFRLLKTLD 498

[Close]

BLAST of Carg11721 vs. ExPASy Swiss-Prot
Match: B0BNA9 (CCR4-NOT transcription complex subunit 11 OS=Rattus norvegicus OX=10116 GN=Cnot11 PE=2 SV=1)

HSP 1 Score: 302.4 bits (773), Expect = 8.0e-81
Identity = 166/273 (60.81%), Postives = 197/273 (72.16%), Query Frame = 0


Query: 141 ASVRNVVPDPDVPRGCDANSVEFDQQPG--VVPKVGSGEKDVVGLLSNVSPRGSSPEWIR 200
           AS  +++ DPD     D+++  FD      +   + SG K  +            PE+IR
Sbjct: 232 ASFPSILSDPDP----DSSNSAFDSSVASRITESLVSGPKPPI-------ESHFRPEFIR 291

Query: 201 PPPPRLPTQNGELVWLN-VDDDHELSWDHEICVDSSRGAAARDLIAKAVKGPLIPAEHEQ 260
           PPPP L     EL WLN  + +H + WD  +CV +S G   + ++AKA K PL   +  Q
Sbjct: 292 PPPP-LHICEDELAWLNPTEPEHAIQWDRSMCVKNSTGVEIKRIMAKAFKSPLSSPQQTQ 351

Query: 261 AVEELENDPKLVYHCGLTPRKLPELVENNPLVAVEVLKKLINSPEIAEYFHVLVNMDMSL 320
            + ELE DPKLVYH GLTP KLP+LVENNPLVA+E+L KL+ S +I EYF VLVNMDMSL
Sbjct: 352 LLGELEKDPKLVYHIGLTPAKLPDLVENNPLVAIEMLLKLMQSSQITEYFSVLVNMDMSL 411

Query: 321 HSMEVVNRLTTAVELPSEFIHMYISNCISSCENIKDKYMQNRLVRLVCVFLQSLIRNNII 380
           HSMEVVNRLTTAV+LP EFIH+YISNCIS+CE IKDKYMQNRLVRLVCVFLQSLIRN II
Sbjct: 412 HSMEVVNRLTTAVDLPPEFIHLYISNCISTCEQIKDKYMQNRLVRLVCVFLQSLIRNKII 471

Query: 381 NVKDLFIEVQAFCIEFSRIREAAALFRLLKSLE 411
           NV+DLFIEVQAFCIEFSRIREAA LFRLLK+L+
Sbjct: 472 NVQDLFIEVQAFCIEFSRIREAAGLFRLLKTLD 492

[Close]

BLAST of Carg11721 vs. ExPASy Swiss-Prot
Match: Q9CWN7 (CCR4-NOT transcription complex subunit 11 OS=Mus musculus OX=10090 GN=Cnot11 PE=1 SV=1)

HSP 1 Score: 302.0 bits (772), Expect = 1.0e-80
Identity = 166/273 (60.81%), Postives = 197/273 (72.16%), Query Frame = 0


Query: 141 ASVRNVVPDPDVPRGCDANSVEFDQQPG--VVPKVGSGEKDVVGLLSNVSPRGSSPEWIR 200
           AS  +++ DPD     D+++  FD      +   + SG K  +            PE+IR
Sbjct: 233 ASFPSILSDPDP----DSSNSGFDSSVASRITESLVSGPKPPI-------ESHFRPEFIR 292

Query: 201 PPPPRLPTQNGELVWLN-VDDDHELSWDHEICVDSSRGAAARDLIAKAVKGPLIPAEHEQ 260
           PPPP L     EL WLN  + +H + WD  +CV +S G   + ++AKA K PL   +  Q
Sbjct: 293 PPPP-LHICEDELAWLNPTEPEHAIQWDRSMCVKNSTGVEIKRIMAKAFKSPLSSPQQTQ 352

Query: 261 AVEELENDPKLVYHCGLTPRKLPELVENNPLVAVEVLKKLINSPEIAEYFHVLVNMDMSL 320
            + ELE DPKLVYH GLTP KLP+LVENNPLVA+E+L KL+ S +I EYF VLVNMDMSL
Sbjct: 353 LLGELEKDPKLVYHIGLTPAKLPDLVENNPLVAIEMLLKLMQSSQITEYFSVLVNMDMSL 412

Query: 321 HSMEVVNRLTTAVELPSEFIHMYISNCISSCENIKDKYMQNRLVRLVCVFLQSLIRNNII 380
           HSMEVVNRLTTAV+LP EFIH+YISNCIS+CE IKDKYMQNRLVRLVCVFLQSLIRN II
Sbjct: 413 HSMEVVNRLTTAVDLPPEFIHLYISNCISTCEQIKDKYMQNRLVRLVCVFLQSLIRNKII 472

Query: 381 NVKDLFIEVQAFCIEFSRIREAAALFRLLKSLE 411
           NV+DLFIEVQAFCIEFSRIREAA LFRLLK+L+
Sbjct: 473 NVQDLFIEVQAFCIEFSRIREAAGLFRLLKTLD 493

[Close]

BLAST of Carg11721 vs. ExPASy Swiss-Prot
Match: A4QP78 (CCR4-NOT transcription complex subunit 11 OS=Danio rerio OX=7955 GN=cnot11 PE=2 SV=1)

HSP 1 Score: 296.6 bits (758), Expect = 4.4e-79
Identity = 153/218 (70.18%), Postives = 178/218 (81.65%), Query Frame = 0


Query: 194 PEWIRPPPPRLPTQNGELVWLN-VDDDHELSWDHEICVDSSRGAAARDLIAKAVKGPLIP 253
           PE+IRP PP L  ++ EL WLN  + +H + WD  +CV +  G   + ++AKA K PL  
Sbjct: 217 PEFIRPTPPLLVCED-ELCWLNPCEPEHRVQWDRSMCVRNGTGVEIKRIMAKAFKSPLSA 276

Query: 254 AEHEQAVEELENDPKLVYHCGLTPRKLPELVENNPLVAVEVLKKLINSPEIAEYFHVLVN 313
           A+  Q + ELE D KLVYH GLTP KLP+LVENNPLVA+E+L KL++S +I EYF VLVN
Sbjct: 277 AQQTQLLGELEKDLKLVYHIGLTPAKLPDLVENNPLVAIEMLLKLMSSSQITEYFSVLVN 336

Query: 314 MDMSLHSMEVVNRLTTAVELPSEFIHMYISNCISSCENIKDKYMQNRLVRLVCVFLQSLI 373
           MDMSLHSMEVVNRLTTAV+LP EFIH+YISNCIS+CE IKDKYMQNRLVRLVCVFLQSLI
Sbjct: 337 MDMSLHSMEVVNRLTTAVDLPPEFIHLYISNCISTCEQIKDKYMQNRLVRLVCVFLQSLI 396

Query: 374 RNNIINVKDLFIEVQAFCIEFSRIREAAALFRLLKSLE 411
           RN IINV+DLFIEVQAFCIEFSRIREAA LFRLLK+L+
Sbjct: 397 RNKIINVQDLFIEVQAFCIEFSRIREAAGLFRLLKTLD 433

[Close]

BLAST of Carg11721 vs. ExPASy Swiss-Prot
Match: Q1ZXI2 (CCR4-NOT transcription complex subunit 11 OS=Dictyostelium discoideum OX=44689 GN=cnot11 PE=3 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 7.3e-50
Identity = 102/168 (60.71%), Postives = 129/168 (76.79%), Query Frame = 0


Query: 239 RDLIAKAVKGPLIPAEHEQAVEELENDPKLVYHCGLTPRKLPELVENNPLVAVEVLKKLI 298
           RDL+ KA+KG L  ++  Q   E++ DPKL Y+ GLTP+ LP LVENN  VA++ L KLI
Sbjct: 420 RDLMTKAIKGRLKKSQILQIKNEMDIDPKLAYYSGLTPKNLPFLVENNTQVAIDTLLKLI 479

Query: 299 NSPEIAEYFHVLVNMDMSLHSMEVVNRLTTAVELPSEFIHMYISNCISSCENIKDKYMQN 358
           NSP+  ++F  L++M+M+  SMEVVN L T V+LP  FI MYI+NCI SC NIKDK MQ 
Sbjct: 480 NSPDFKDHFQTLISMEMNFRSMEVVNALAT-VDLPPHFIPMYITNCIDSCNNIKDKAMQQ 539

Query: 359 RLVRLVCVFLQSLIRNNIINVKDLFIEVQAFCIEFSRIREAAALFRLL 407
           R VRLVCVF+QSLIRNNIIN+K+LF EVQ FC+EFS+IREA +LF+ +
Sbjct: 540 RSVRLVCVFIQSLIRNNIINIKNLFCEVQTFCLEFSKIREAISLFKAI 586

[Close]

BLAST of Carg11721 vs. ExPASy TrEMBL
Match: A0A6J1G5K5 (CCR4-NOT transcription complex subunit 11 OS=Cucurbita moschata OX=3662 GN=LOC111451023 PE=3 SV=1)

HSP 1 Score: 797.7 bits (2059), Expect = 2.2e-227
Identity = 410/447 (91.72%), Postives = 410/447 (91.72%), Query Frame = 0


Query: 1   MFKMANTEFKWGSMKMTLTVDESRTLYSLLAGGDERPFLDIIADFTSKIPRTRQFIACYS 60
           MFKMANTEFKWGSMKMTLTVDESRTLYSLLAGGDERPFLDIIADFTSKIPRTRQFIACYS
Sbjct: 1   MFKMANTEFKWGSMKMTLTVDESRTLYSLLAGGDERPFLDIIADFTSKIPRTRQFIACYS 60

Query: 61  LAILLE-------------------------------------AASDEEAENCERAFIFQ 120
           LAILLE                                     AASDEEAENCERAFIFQ
Sbjct: 61  LAILLEPKKLLHATQRLVGFSILHQAYSSQKSSSNPFISFIVHAASDEEAENCERAFIFQ 120

Query: 121 LLASDSSSDGKEFLKKSASDYIVHFDPSLHALPKREQLQQQFCDELQAQSFDCFSKDASV 180
           LLASDSSSDGKEFLKKSASDYIVHFDPSLHALPKREQLQQQFCDELQAQSFDCFSKDASV
Sbjct: 121 LLASDSSSDGKEFLKKSASDYIVHFDPSLHALPKREQLQQQFCDELQAQSFDCFSKDASV 180

Query: 181 RNVVPDPDVPRGCDANSVEFDQQPGVVPKVGSGEKDVVGLLSNVSPRGSSPEWIRPPPPR 240
           RNVVPDPDVPRGCDANSVEFDQQPGVVPKVGSGEKDVVGLLSNVSPRGSSPEWIRPPPPR
Sbjct: 181 RNVVPDPDVPRGCDANSVEFDQQPGVVPKVGSGEKDVVGLLSNVSPRGSSPEWIRPPPPR 240

Query: 241 LPTQNGELVWLNVDDDHELSWDHEICVDSSRGAAARDLIAKAVKGPLIPAEHEQAVEELE 300
           LPTQNGELVWLNVDDDHELSWDHEICVDSSRGAAARDLIAKAVKGPLIPAEHEQAVEELE
Sbjct: 241 LPTQNGELVWLNVDDDHELSWDHEICVDSSRGAAARDLIAKAVKGPLIPAEHEQAVEELE 300

Query: 301 NDPKLVYHCGLTPRKLPELVENNPLVAVEVLKKLINSPEIAEYFHVLVNMDMSLHSMEVV 360
           NDPKLVYHCGLTPRKLPELVENNPLVAVEVLKKLINSPEIAEYFHVLVNMDMSLHSMEVV
Sbjct: 301 NDPKLVYHCGLTPRKLPELVENNPLVAVEVLKKLINSPEIAEYFHVLVNMDMSLHSMEVV 360

Query: 361 NRLTTAVELPSEFIHMYISNCISSCENIKDKYMQNRLVRLVCVFLQSLIRNNIINVKDLF 411
           NRLTTAVELPSEFIHMYISNCISSCENIKDKYMQNRLVRLVCVFLQSLIRNNIINVKDLF
Sbjct: 361 NRLTTAVELPSEFIHMYISNCISSCENIKDKYMQNRLVRLVCVFLQSLIRNNIINVKDLF 420

[Close]

BLAST of Carg11721 vs. ExPASy TrEMBL
Match: A0A6J1L478 (CCR4-NOT transcription complex subunit 11 OS=Cucurbita maxima OX=3661 GN=LOC111499743 PE=3 SV=1)

HSP 1 Score: 790.4 bits (2040), Expect = 3.6e-225
Identity = 406/447 (90.83%), Postives = 408/447 (91.28%), Query Frame = 0


Query: 1   MFKMANTEFKWGSMKMTLTVDESRTLYSLLAGGDERPFLDIIADFTSKIPRTRQFIACYS 60
           MFKMAN EFKWGSMKMTLTVDESRTLYSLLAGGDERPFLDIIADFTSKIPRTRQFIACYS
Sbjct: 1   MFKMANNEFKWGSMKMTLTVDESRTLYSLLAGGDERPFLDIIADFTSKIPRTRQFIACYS 60

Query: 61  LAILLE-------------------------------------AASDEEAENCERAFIFQ 120
           LAILLE                                     AASDEEAENCERAFIFQ
Sbjct: 61  LAILLEPKKLLHATQRLVGFSILHQTYSSQKSSSNPFISFIVHAASDEEAENCERAFIFQ 120

Query: 121 LLASDSSSDGKEFLKKSASDYIVHFDPSLHALPKREQLQQQFCDELQAQSFDCFSKDASV 180
           LLASDSSSDGKEFLKKSASDYIVHFDPSLHALPKREQLQQQFCDE+QAQSFD FSKDASV
Sbjct: 121 LLASDSSSDGKEFLKKSASDYIVHFDPSLHALPKREQLQQQFCDEIQAQSFDFFSKDASV 180

Query: 181 RNVVPDPDVPRGCDANSVEFDQQPGVVPKVGSGEKDVVGLLSNVSPRGSSPEWIRPPPPR 240
           RNVVPDPDVPRGCDANSVEFDQQPG+VPKVGSGEKDVVGLLSNVSPRGSSPEWIRPPPPR
Sbjct: 181 RNVVPDPDVPRGCDANSVEFDQQPGIVPKVGSGEKDVVGLLSNVSPRGSSPEWIRPPPPR 240

Query: 241 LPTQNGELVWLNVDDDHELSWDHEICVDSSRGAAARDLIAKAVKGPLIPAEHEQAVEELE 300
           LPTQNGELVWLNVDDDHELSWDHEICVDSSRGAAARDLIAKAVKGPLIPAEHEQAVEELE
Sbjct: 241 LPTQNGELVWLNVDDDHELSWDHEICVDSSRGAAARDLIAKAVKGPLIPAEHEQAVEELE 300

Query: 301 NDPKLVYHCGLTPRKLPELVENNPLVAVEVLKKLINSPEIAEYFHVLVNMDMSLHSMEVV 360
           NDPKLVYHCGLTPRKLPELVENNPLVAVEVLKKLINSPEIAEYFHVLVNMDMSLHSMEVV
Sbjct: 301 NDPKLVYHCGLTPRKLPELVENNPLVAVEVLKKLINSPEIAEYFHVLVNMDMSLHSMEVV 360

Query: 361 NRLTTAVELPSEFIHMYISNCISSCENIKDKYMQNRLVRLVCVFLQSLIRNNIINVKDLF 411
           NRLTTAVELPSEFIHMYISNCISSCENIKDKYMQNRLVRLVCVFLQSLIRNNIINVKDLF
Sbjct: 361 NRLTTAVELPSEFIHMYISNCISSCENIKDKYMQNRLVRLVCVFLQSLIRNNIINVKDLF 420

[Close]

BLAST of Carg11721 vs. ExPASy TrEMBL
Match: A0A1S4E330 (CCR4-NOT transcription complex subunit 11 OS=Cucumis melo OX=3656 GN=LOC103499604 PE=3 SV=1)

HSP 1 Score: 686.4 bits (1770), Expect = 7.2e-194
Identity = 345/412 (83.74%), Postives = 374/412 (90.78%), Query Frame = 0


Query: 1   MFKMANTEFKWGSMKMTLTVDESRTLYSLLAGGDERPFLDIIADFTSKIPRTRQFIACYS 60
           MFK++N E K GSMKM+LT DESRTLYSLLAGGD RPF DI+ADFTSKIPRTR F+ACYS
Sbjct: 1   MFKISNKEVKSGSMKMSLTADESRTLYSLLAGGDHRPFSDILADFTSKIPRTRHFVACYS 60

Query: 61  LAILLEAASDEEAENCERAFIFQLLASDSSSDGKEFLKKSASDYIVHFDPSLHALPKREQ 120
           L +LLEAASDEEAE  ERAF+FQLLA+D+SS GKEFLK++ASDYI  FDPSLHA P+ EQ
Sbjct: 61  LLVLLEAASDEEAEKYERAFVFQLLATDTSSSGKEFLKQTASDYIKGFDPSLHAFPQLEQ 120

Query: 121 LQQQFCDELQAQSFDCFSKDASVRNVVPDPDVPRGCDANSVEFDQQPGVVPKVGSGEKD- 180
           LQQQFCD++QAQSFDC  KD SVR+VVPDPDVP GCDA+S EFD  PGV PK+GSGE+D 
Sbjct: 121 LQQQFCDKVQAQSFDCLLKDCSVRSVVPDPDVPLGCDADSAEFDLLPGVAPKLGSGERDK 180

Query: 181 -VVGLLSNVSPRGSSPEWIRPPPPRLPTQNGELVWLNVDDDHELSWDHEICVDSSRGAAA 240
            ++GLLSN+S +GSSPEWIRP PPRLP QNGELVWLN+DD HEL WDH +CVD+SRGAA 
Sbjct: 181 TLLGLLSNLSLQGSSPEWIRPLPPRLPIQNGELVWLNLDDHHELLWDHRMCVDTSRGAAV 240

Query: 241 RDLIAKAVKGPLIPAEHEQAVEELENDPKLVYHCGLTPRKLPELVENNPLVAVEVLKKLI 300
           RDLIAKA+KGPLIPA+ EQ V EL NDPKLVYHCGLTPRKLPELVENNPL+AVEVLKKLI
Sbjct: 241 RDLIAKALKGPLIPAQQEQVVVELANDPKLVYHCGLTPRKLPELVENNPLIAVEVLKKLI 300

Query: 301 NSPEIAEYFHVLVNMDMSLHSMEVVNRLTTAVELPSEFIHMYISNCISSCENIKDKYMQN 360
           NSPEIAEYF VLVNMDMSLHSMEVVNRLTTAVELPSEFIHMYI+NCISSCE IKDKYMQN
Sbjct: 301 NSPEIAEYFTVLVNMDMSLHSMEVVNRLTTAVELPSEFIHMYITNCISSCEGIKDKYMQN 360

Query: 361 RLVRLVCVFLQSLIRNNIINVKDLFIEVQAFCIEFSRIREAAALFRLLKSLE 411
           RLVRLVCVFLQSLIRNNIINVKDLFIEVQAFCIEFSRIREAAALFRLLKSLE
Sbjct: 361 RLVRLVCVFLQSLIRNNIINVKDLFIEVQAFCIEFSRIREAAALFRLLKSLE 412

[Close]

BLAST of Carg11721 vs. ExPASy TrEMBL
Match: A0A1S3CDE6 (CCR4-NOT transcription complex subunit 11 OS=Cucumis melo OX=3656 GN=LOC103499604 PE=3 SV=1)

HSP 1 Score: 667.9 bits (1722), Expect = 2.7e-188
Identity = 345/449 (76.84%), Postives = 374/449 (83.30%), Query Frame = 0


Query: 1   MFKMANTEFKWGSMKMTLTVDESRTLYSLLAGGDERPFLDIIADFTSKIPRTRQFIACYS 60
           MFK++N E K GSMKM+LT DESRTLYSLLAGGD RPF DI+ADFTSKIPRTR F+ACYS
Sbjct: 1   MFKISNKEVKSGSMKMSLTADESRTLYSLLAGGDHRPFSDILADFTSKIPRTRHFVACYS 60

Query: 61  LAILLE-------------------------------------AASDEEAENCERAFIFQ 120
           L +LLE                                     AASDEEAE  ERAF+FQ
Sbjct: 61  LLVLLEPKKLLRATQRLVGFSILHQTYSSQKSSFNPFISFIVNAASDEEAEKYERAFVFQ 120

Query: 121 LLASDSSSDGKEFLKKSASDYIVHFDPSLHALPKREQLQQQFCDELQAQSFDCFSKDASV 180
           LLA+D+SS GKEFLK++ASDYI  FDPSLHA P+ EQLQQQFCD++QAQSFDC  KD SV
Sbjct: 121 LLATDTSSSGKEFLKQTASDYIKGFDPSLHAFPQLEQLQQQFCDKVQAQSFDCLLKDCSV 180

Query: 181 RNVVPDPDVPRGCDANSVEFDQQPGVVPKVGSGEKD--VVGLLSNVSPRGSSPEWIRPPP 240
           R+VVPDPDVP GCDA+S EFD  PGV PK+GSGE+D  ++GLLSN+S +GSSPEWIRP P
Sbjct: 181 RSVVPDPDVPLGCDADSAEFDLLPGVAPKLGSGERDKTLLGLLSNLSLQGSSPEWIRPLP 240

Query: 241 PRLPTQNGELVWLNVDDDHELSWDHEICVDSSRGAAARDLIAKAVKGPLIPAEHEQAVEE 300
           PRLP QNGELVWLN+DD HEL WDH +CVD+SRGAA RDLIAKA+KGPLIPA+ EQ V E
Sbjct: 241 PRLPIQNGELVWLNLDDHHELLWDHRMCVDTSRGAAVRDLIAKALKGPLIPAQQEQVVVE 300

Query: 301 LENDPKLVYHCGLTPRKLPELVENNPLVAVEVLKKLINSPEIAEYFHVLVNMDMSLHSME 360
           L NDPKLVYHCGLTPRKLPELVENNPL+AVEVLKKLINSPEIAEYF VLVNMDMSLHSME
Sbjct: 301 LANDPKLVYHCGLTPRKLPELVENNPLIAVEVLKKLINSPEIAEYFTVLVNMDMSLHSME 360

Query: 361 VVNRLTTAVELPSEFIHMYISNCISSCENIKDKYMQNRLVRLVCVFLQSLIRNNIINVKD 411
           VVNRLTTAVELPSEFIHMYI+NCISSCE IKDKYMQNRLVRLVCVFLQSLIRNNIINVKD
Sbjct: 361 VVNRLTTAVELPSEFIHMYITNCISSCEGIKDKYMQNRLVRLVCVFLQSLIRNNIINVKD 420

[Close]

BLAST of Carg11721 vs. ExPASy TrEMBL
Match: A0A6J1DVV5 (CCR4-NOT transcription complex subunit 11 OS=Momordica charantia OX=3673 GN=LOC111024935 PE=3 SV=1)

HSP 1 Score: 664.5 bits (1713), Expect = 2.9e-187
Identity = 346/449 (77.06%), Postives = 374/449 (83.30%), Query Frame = 0


Query: 1   MFKMANTEFKWGSMKMTLTVDESRTLYSLLAGGDERPFLDIIADFTSKIPRTRQFIACYS 60
           MFK +  E K  SMKM+LT DESRTLYS LAGGD+RPF+DIIADFT+KIPR R F+ACYS
Sbjct: 1   MFKFSPKEVKRESMKMSLTPDESRTLYSFLAGGDQRPFMDIIADFTAKIPRPRHFVACYS 60

Query: 61  LAILLE-------------------------------------AASDEEAENCERAFIFQ 120
           L +LLE                                     AAS+EEAE  ERAFIFQ
Sbjct: 61  LVLLLEPKKLLNSTQRLVGFAILHQAYSSQKSSSNPFISFIVNAASNEEAEKYERAFIFQ 120

Query: 121 LLASDSSSDGKEFLKKSASDYIVHFDPSLHALPKREQLQQQFCDELQAQSFDCFSKDASV 180
           LLASDSSS GKEFLK+SASDYI  FDPSLHA P+ EQLQQQFCD++QAQSFDCFSKD+SV
Sbjct: 121 LLASDSSSGGKEFLKQSASDYIKGFDPSLHAFPQLEQLQQQFCDKVQAQSFDCFSKDSSV 180

Query: 181 RNVVPDPDVPRGCDANSVEFDQQPGVVPKVGSGEKD--VVGLLSNVSPRGSSPEWIRPPP 240
           RNVVPDPDVP+GCDANS EFD  PGVVPK+GSGE+D  ++GLLSN+S  G SPEWIRP P
Sbjct: 181 RNVVPDPDVPQGCDANSPEFDLLPGVVPKLGSGERDETLMGLLSNLSLEGLSPEWIRPLP 240

Query: 241 PRLPTQNGELVWLNVDDDHELSWDHEICVDSSRGAAARDLIAKAVKGPLIPAEHEQAVEE 300
           PRLP QNGELVWLN+DD HEL WDH +CVD+SRGAA RDLIAKA+KGPL PA+ EQ V E
Sbjct: 241 PRLPVQNGELVWLNLDDHHELLWDHGMCVDTSRGAAVRDLIAKALKGPLAPAQQEQVVVE 300

Query: 301 LENDPKLVYHCGLTPRKLPELVENNPLVAVEVLKKLINSPEIAEYFHVLVNMDMSLHSME 360
           L +DPKLVYHCGLTPRKLPELVENNPL+AVEVLKKLINSPEIAEYF VLVNMDMSLHSME
Sbjct: 301 LASDPKLVYHCGLTPRKLPELVENNPLIAVEVLKKLINSPEIAEYFTVLVNMDMSLHSME 360

Query: 361 VVNRLTTAVELPSEFIHMYISNCISSCENIKDKYMQNRLVRLVCVFLQSLIRNNIINVKD 411
           VVNRLTTAVELPSEFIHMYI+NCISSCE+IKDKYMQNRLVRLVCVFLQSLIRNNIINVKD
Sbjct: 361 VVNRLTTAVELPSEFIHMYITNCISSCESIKDKYMQNRLVRLVCVFLQSLIRNNIINVKD 420

[Close]

BLAST of Carg11721 vs. TAIR 10
Match: AT5G18420.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2363 (InterPro:IPR019312); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 429.9 bits (1104), Expect = 2.3e-120
Identity = 231/436 (52.98%), Postives = 288/436 (66.06%), Query Frame = 0


Query: 13  SMKMTLTVDESRTLYSLLAGGDERPFLDIIADFTSKIPRTRQFIACYSLAILLE------ 72
           S  M + ++ES  + SLL   D RP  D++++F SK    R    C SL+++L+      
Sbjct: 4   STMMIMRIEESAIVLSLLK-SDLRPMEDVLSEFDSKFESARYLSVCNSLSMMLQMFKNTE 63

Query: 73  ----------------------------AASDEEAENCERAFIFQLLASDSSSDGKEFLK 132
                                       AA +E+ E  ERAF+  LL  +S ++ KE LK
Sbjct: 64  RLIAFGIIYQCYSSQKPSFNPFLSEMISAACNEQLEKSERAFLLHLLQWNSYNNVKEILK 123

Query: 133 KSASDYIVHFDPSLHALPKREQLQQQFCDELQAQSFDCFSKDASVRNVVPDPDVPRGCDA 192
            SA DYI  FDPS H  P+  +LQ+++ D+           D S++ ++ DPDVPRGCD 
Sbjct: 124 LSAVDYIRSFDPSTHDFPELGELQREYGDKADPGPSSHIFADYSLKKLLHDPDVPRGCDP 183

Query: 193 NSVEFDQQPGVVPKVGSGEKD--VVGLLSNVSPRGSSPEWIRPPPPRLPTQNGELVWLNV 252
           NS EFD Q GV P++GSG++D  + G L N++  G  P WIRP PPR P    EL+W++ 
Sbjct: 184 NSPEFDVQAGVNPRIGSGDRDEALSGFLGNLTMGGLGPRWIRPCPPRYPVHQSELLWIDP 243

Query: 253 DDDHELSWDHEICVDSSRGAAARDLIAKAVKGPLIPAEHEQAVEELENDPKLVYHCGLTP 312
           D+ HEL WD ++C D+S GA  RDL+ K +K  L P E E  + EL NDPKLV+HCG+TP
Sbjct: 244 DNKHELVWDDKMCADTSSGATVRDLLVKGLKVTLSPTEQEDIITELANDPKLVFHCGITP 303

Query: 313 RKLPELVENNPLVAVEVLKKLINSPEIAEYFHVLVNMDMSLHSMEVVNRLTTAVELPSEF 372
           RKLP+LVE+NP +AVE+L KL NS EI +Y+  L NMDMSLHSMEVVNRLTTAVELP +F
Sbjct: 304 RKLPQLVEHNPQIAVEILTKLNNSTEINDYYEALGNMDMSLHSMEVVNRLTTAVELPKDF 363

Query: 373 IHMYISNCISSCENIK--DKYMQNRLVRLVCVFLQSLIRNNIINVKDLFIEVQAFCIEFS 411
           I MYI+NCISSCEN K  DKYMQNRLVRLVCVFLQSLIRN IINVKDLFIEVQAFCIEFS
Sbjct: 364 IRMYITNCISSCENAKQQDKYMQNRLVRLVCVFLQSLIRNKIINVKDLFIEVQAFCIEFS 423

[Close]

BLAST of Carg11721 vs. TAIR 10
Match: AT5G18420.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2363 (InterPro:IPR019312); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 429.1 bits (1102), Expect = 4.0e-120
Identity = 231/438 (52.74%), Postives = 288/438 (65.75%), Query Frame = 0


Query: 13  SMKMTLTVDESRTLYSLLAGGDERPFLDIIADFTSKIPRTRQFIACYSLAILLE------ 72
           S  M + ++ES  + SLL   D RP  D++++F SK    R    C SL+++L+      
Sbjct: 4   STMMIMRIEESAIVLSLLK-SDLRPMEDVLSEFDSKFESARYLSVCNSLSMMLQDQQMFK 63

Query: 73  -------------------------------AASDEEAENCERAFIFQLLASDSSSDGKE 132
                                          AA +E+ E  ERAF+  LL  +S ++ KE
Sbjct: 64  NTERLIAFGIIYQCYSSQKPSFNPFLSEMISAACNEQLEKSERAFLLHLLQWNSYNNVKE 123

Query: 133 FLKKSASDYIVHFDPSLHALPKREQLQQQFCDELQAQSFDCFSKDASVRNVVPDPDVPRG 192
            LK SA DYI  FDPS H  P+  +LQ+++ D+           D S++ ++ DPDVPRG
Sbjct: 124 ILKLSAVDYIRSFDPSTHDFPELGELQREYGDKADPGPSSHIFADYSLKKLLHDPDVPRG 183

Query: 193 CDANSVEFDQQPGVVPKVGSGEKD--VVGLLSNVSPRGSSPEWIRPPPPRLPTQNGELVW 252
           CD NS EFD Q GV P++GSG++D  + G L N++  G  P WIRP PPR P    EL+W
Sbjct: 184 CDPNSPEFDVQAGVNPRIGSGDRDEALSGFLGNLTMGGLGPRWIRPCPPRYPVHQSELLW 243

Query: 253 LNVDDDHELSWDHEICVDSSRGAAARDLIAKAVKGPLIPAEHEQAVEELENDPKLVYHCG 312
           ++ D+ HEL WD ++C D+S GA  RDL+ K +K  L P E E  + EL NDPKLV+HCG
Sbjct: 244 IDPDNKHELVWDDKMCADTSSGATVRDLLVKGLKVTLSPTEQEDIITELANDPKLVFHCG 303

Query: 313 LTPRKLPELVENNPLVAVEVLKKLINSPEIAEYFHVLVNMDMSLHSMEVVNRLTTAVELP 372
           +TPRKLP+LVE+NP +AVE+L KL NS EI +Y+  L NMDMSLHSMEVVNRLTTAVELP
Sbjct: 304 ITPRKLPQLVEHNPQIAVEILTKLNNSTEINDYYEALGNMDMSLHSMEVVNRLTTAVELP 363

Query: 373 SEFIHMYISNCISSCENIK-DKYMQNRLVRLVCVFLQSLIRNNIINVKDLFIEVQAFCIE 411
            +FI MYI+NCISSCEN K DKYMQNRLVRLVCVFLQSLIRN IINVKDLFIEVQAFCIE
Sbjct: 364 KDFIRMYITNCISSCENAKQDKYMQNRLVRLVCVFLQSLIRNKIINVKDLFIEVQAFCIE 423

[Close]

BLAST of Carg11721 vs. TAIR 10
Match: AT5G18420.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2363 (InterPro:IPR019312); Has 233 Blast hits to 233 proteins in 86 species: Archae - 0; Bacteria - 0; Metazoa - 106; Fungi - 2; Plants - 59; Viruses - 0; Other Eukaryotes - 66 (source: NCBI BLink). )

HSP 1 Score: 428.7 bits (1101), Expect = 5.2e-120
Identity = 231/439 (52.62%), Postives = 288/439 (65.60%), Query Frame = 0


Query: 13  SMKMTLTVDESRTLYSLLAGGDERPFLDIIADFTSKIPRTRQFIACYSLAILLE------ 72
           S  M + ++ES  + SLL   D RP  D++++F SK    R    C SL+++L+      
Sbjct: 4   STMMIMRIEESAIVLSLLK-SDLRPMEDVLSEFDSKFESARYLSVCNSLSMMLQDQQMFK 63

Query: 73  -------------------------------AASDEEAENCERAFIFQLLASDSSSDGKE 132
                                          AA +E+ E  ERAF+  LL  +S ++ KE
Sbjct: 64  NTERLIAFGIIYQCYSSQKPSFNPFLSEMISAACNEQLEKSERAFLLHLLQWNSYNNVKE 123

Query: 133 FLKKSASDYIVHFDPSLHALPKREQLQQQFCDELQAQSFDCFSKDASVRNVVPDPDVPRG 192
            LK SA DYI  FDPS H  P+  +LQ+++ D+           D S++ ++ DPDVPRG
Sbjct: 124 ILKLSAVDYIRSFDPSTHDFPELGELQREYGDKADPGPSSHIFADYSLKKLLHDPDVPRG 183

Query: 193 CDANSVEFDQQPGVVPKVGSGEKD--VVGLLSNVSPRGSSPEWIRPPPPRLPTQNGELVW 252
           CD NS EFD Q GV P++GSG++D  + G L N++  G  P WIRP PPR P    EL+W
Sbjct: 184 CDPNSPEFDVQAGVNPRIGSGDRDEALSGFLGNLTMGGLGPRWIRPCPPRYPVHQSELLW 243

Query: 253 LNVDDDHELSWDHEICVDSSRGAAARDLIAKAVKGPLIPAEHEQAVEELENDPKLVYHCG 312
           ++ D+ HEL WD ++C D+S GA  RDL+ K +K  L P E E  + EL NDPKLV+HCG
Sbjct: 244 IDPDNKHELVWDDKMCADTSSGATVRDLLVKGLKVTLSPTEQEDIITELANDPKLVFHCG 303

Query: 313 LTPRKLPELVENNPLVAVEVLKKLINSPEIAEYFHVLVNMDMSLHSMEVVNRLTTAVELP 372
           +TPRKLP+LVE+NP +AVE+L KL NS EI +Y+  L NMDMSLHSMEVVNRLTTAVELP
Sbjct: 304 ITPRKLPQLVEHNPQIAVEILTKLNNSTEINDYYEALGNMDMSLHSMEVVNRLTTAVELP 363

Query: 373 SEFIHMYISNCISSCENIK--DKYMQNRLVRLVCVFLQSLIRNNIINVKDLFIEVQAFCI 411
            +FI MYI+NCISSCEN K  DKYMQNRLVRLVCVFLQSLIRN IINVKDLFIEVQAFCI
Sbjct: 364 KDFIRMYITNCISSCENAKQQDKYMQNRLVRLVCVFLQSLIRNKIINVKDLFIEVQAFCI 423

The following BLAST results are available for this feature:

BLAST of Carg11721 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7035303.1	1.2e-232	100.00	CCR4-NOT transcription complex subunit 11 [Cucurbita argyrosperma subsp. argyros...	[more]
XP_022947019.1	4.6e-227	91.72	CCR4-NOT transcription complex subunit 11-like [Cucurbita moschata]	[more]
XP_023007169.1	7.3e-225	90.83	CCR4-NOT transcription complex subunit 11-like [Cucurbita maxima]	[more]
XP_023532661.1	3.1e-223	90.83	CCR4-NOT transcription complex subunit 11-like [Cucurbita pepo subsp. pepo]	[more]
KAG6605345.1	1.9e-217	91.24	CCR4-NOT transcription complex subunit 11, partial [Cucurbita argyrosperma subsp...	[more]

BLAST of Carg11721 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9UKZ1	6.1e-81	61.17	CCR4-NOT transcription complex subunit 11 OS=Homo sapiens OX=9606 GN=CNOT11 PE=1...	[more]
B0BNA9	8.0e-81	60.81	CCR4-NOT transcription complex subunit 11 OS=Rattus norvegicus OX=10116 GN=Cnot1...	[more]
Q9CWN7	1.0e-80	60.81	CCR4-NOT transcription complex subunit 11 OS=Mus musculus OX=10090 GN=Cnot11 PE=...	[more]
A4QP78	4.4e-79	70.18	CCR4-NOT transcription complex subunit 11 OS=Danio rerio OX=7955 GN=cnot11 PE=2 ...	[more]
Q1ZXI2	7.3e-50	60.71	CCR4-NOT transcription complex subunit 11 OS=Dictyostelium discoideum OX=44689 G...	[more]

BLAST of Carg11721 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G5K5	2.2e-227	91.72	CCR4-NOT transcription complex subunit 11 OS=Cucurbita moschata OX=3662 GN=LOC11...	[more]
A0A6J1L478	3.6e-225	90.83	CCR4-NOT transcription complex subunit 11 OS=Cucurbita maxima OX=3661 GN=LOC1114...	[more]
A0A1S4E330	7.2e-194	83.74	CCR4-NOT transcription complex subunit 11 OS=Cucumis melo OX=3656 GN=LOC10349960...	[more]
A0A1S3CDE6	2.7e-188	76.84	CCR4-NOT transcription complex subunit 11 OS=Cucumis melo OX=3656 GN=LOC10349960...	[more]
A0A6J1DVV5	2.9e-187	77.06	CCR4-NOT transcription complex subunit 11 OS=Momordica charantia OX=3673 GN=LOC1...	[more]

BLAST of Carg11721 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G18420.3	2.3e-120	52.98	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G18420.1	4.0e-120	52.74	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G18420.2	5.2e-120	52.62	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019312	CCR4-NOT transcription complex subunit 11	PFAM	PF10155	CNOT11	coord: 283..407 e-value: 2.6E-53 score: 179.5
IPR019312	CCR4-NOT transcription complex subunit 11	PANTHER	PTHR15975	UNCHARACTERIZED	coord: 65..410
IPR019312	CCR4-NOT transcription complex subunit 11	PANTHER	PTHR15975	UNCHARACTERIZED	coord: 16..66
None	No IPR available	PANTHER	PTHR15975:SF3	BNAC09G39370D PROTEIN	coord: 65..410
None	No IPR available	PANTHER	PTHR15975:SF3	BNAC09G39370D PROTEIN	coord: 16..66

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg11721-RA	Carg11721-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0031047	gene silencing by RNA
cellular_component	GO:0030014	CCR4-NOT complex
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus