Carg11588 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg11588
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
LocationCarg_Chr17: 9876987 .. 9877739 (+)
RNA-Seq ExpressionCarg11588
SyntenyCarg11588
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAATAAAGAACAAAGGCAAAGTCCATCCATCTCCATCTTCTTCTTCTTCTTCTTCTTCTTCTTCCGATGGGGACTTTTTTGAGGTCTTCAACTATCTTCCAGTCGCGATGTTGGCTCTCATCTCTCTTCTGACCGTTGACGATCGAGAGGTTTTGGCCTTCATGATGAGGAGATCCATGGAAACCTCATCGACCTCGTCTTTCGTTTCTGGAAATAAATTTTCCAAGAGAGCTCCAAAGAAATCCACGGATCCACGCGCCAGTTCTGGTAGCGCGTGTGTTCACTCACCCCCCTCTTTTACTTGCTTTGATTGTTACATGAGTTACTGGGACCGGTGGAACTCGTCGCCGAACGGGGAGCTGATTCATCAGGCCATTGAGGCTTTTGAGGAGCAATTGGCTAACGGGGAAAAATCCAGCAAGAACGTCAAAGGGAAGAAGAGGGAAAAAATCGGCCGTCAGTCGTCGGACAAGCCTGTGAATGTTGTTGCCCCGCCACTGCCGCCGTTGCCGGAAGTTCTTCCTCTGCCGATTGATGAGGGGTCTTCTGCGGCTCCGACGACGTCTGGGACTGACGATGTGGAAGCAGCGGAGGGAAAGGGAGAGCCATCGCGGACTGAGGATGAGACGGCGGTGATGATTGTTCCGTCGCCGCCACCGAGCAACCGCAAGGGTTTGGCCCGGAAGGTATGGCCGGACGTATTAGGGTTATTCAATTCTCGTTTATGGAGTCTTTGGGGTCCACATTAG

mRNA sequence

ATGAAAATAAAGAACAAAGGCAAAGTCCATCCATCTCCATCTTCTTCTTCTTCTTCTTCTTCTTCTTCCGATGGGGACTTTTTTGAGGTCTTCAACTATCTTCCAGTCGCGATGTTGGCTCTCATCTCTCTTCTGACCGTTGACGATCGAGAGGTTTTGGCCTTCATGATGAGGAGATCCATGGAAACCTCATCGACCTCGTCTTTCGTTTCTGGAAATAAATTTTCCAAGAGAGCTCCAAAGAAATCCACGGATCCACGCGCCAGTTCTGGTAGCGCGTGTGTTCACTCACCCCCCTCTTTTACTTGCTTTGATTGTTACATGAGTTACTGGGACCGGTGGAACTCGTCGCCGAACGGGGAGCTGATTCATCAGGCCATTGAGGCTTTTGAGGAGCAATTGGCTAACGGGGAAAAATCCAGCAAGAACGTCAAAGGGAAGAAGAGGGAAAAAATCGGCCGTCAGTCGTCGGACAAGCCTGTGAATGTTGTTGCCCCGCCACTGCCGCCGTTGCCGGAAGTTCTTCCTCTGCCGATTGATGAGGGGTCTTCTGCGGCTCCGACGACGTCTGGGACTGACGATGTGGAAGCAGCGGAGGGAAAGGGAGAGCCATCGCGGACTGAGGATGAGACGGCGGTGATGATTGTTCCGTCGCCGCCACCGAGCAACCGCAAGGGTTTGGCCCGGAAGGTATGGCCGGACGTATTAGGGTTATTCAATTCTCGTTTATGGAGTCTTTGGGGTCCACATTAG

Coding sequence (CDS)

ATGAAAATAAAGAACAAAGGCAAAGTCCATCCATCTCCATCTTCTTCTTCTTCTTCTTCTTCTTCTTCCGATGGGGACTTTTTTGAGGTCTTCAACTATCTTCCAGTCGCGATGTTGGCTCTCATCTCTCTTCTGACCGTTGACGATCGAGAGGTTTTGGCCTTCATGATGAGGAGATCCATGGAAACCTCATCGACCTCGTCTTTCGTTTCTGGAAATAAATTTTCCAAGAGAGCTCCAAAGAAATCCACGGATCCACGCGCCAGTTCTGGTAGCGCGTGTGTTCACTCACCCCCCTCTTTTACTTGCTTTGATTGTTACATGAGTTACTGGGACCGGTGGAACTCGTCGCCGAACGGGGAGCTGATTCATCAGGCCATTGAGGCTTTTGAGGAGCAATTGGCTAACGGGGAAAAATCCAGCAAGAACGTCAAAGGGAAGAAGAGGGAAAAAATCGGCCGTCAGTCGTCGGACAAGCCTGTGAATGTTGTTGCCCCGCCACTGCCGCCGTTGCCGGAAGTTCTTCCTCTGCCGATTGATGAGGGGTCTTCTGCGGCTCCGACGACGTCTGGGACTGACGATGTGGAAGCAGCGGAGGGAAAGGGAGAGCCATCGCGGACTGAGGATGAGACGGCGGTGATGATTGTTCCGTCGCCGCCACCGAGCAACCGCAAGGGTTTGGCCCGGAAGGTATGGCCGGACGTATTAGGGTTATTCAATTCTCGTTTATGGAGTCTTTGGGGTCCACATTAG

Protein sequence

MKIKNKGKVHPSPSSSSSSSSSSDGDFFEVFNYLPVAMLALISLLTVDDREVLAFMMRRSMETSSTSSFVSGNKFSKRAPKKSTDPRASSGSACVHSPPSFTCFDCYMSYWDRWNSSPNGELIHQAIEAFEEQLANGEKSSKNVKGKKREKIGRQSSDKPVNVVAPPLPPLPEVLPLPIDEGSSAAPTTSGTDDVEAAEGKGEPSRTEDETAVMIVPSPPPSNRKGLARKVWPDVLGLFNSRLWSLWGPH
Homology
BLAST of Carg11588 vs. NCBI nr
Match: KAG7014644.1 (hypothetical protein SDJN02_24823, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 488.4 bits (1256), Expect = 3.6e-134
Identity = 250/250 (100.00%), Postives = 250/250 (100.00%), Query Frame = 0

Query: 1   MKIKNKGKVHPSPSSSSSSSSSSDGDFFEVFNYLPVAMLALISLLTVDDREVLAFMMRRS 60
           MKIKNKGKVHPSPSSSSSSSSSSDGDFFEVFNYLPVAMLALISLLTVDDREVLAFMMRRS
Sbjct: 1   MKIKNKGKVHPSPSSSSSSSSSSDGDFFEVFNYLPVAMLALISLLTVDDREVLAFMMRRS 60

Query: 61  METSSTSSFVSGNKFSKRAPKKSTDPRASSGSACVHSPPSFTCFDCYMSYWDRWNSSPNG 120
           METSSTSSFVSGNKFSKRAPKKSTDPRASSGSACVHSPPSFTCFDCYMSYWDRWNSSPNG
Sbjct: 61  METSSTSSFVSGNKFSKRAPKKSTDPRASSGSACVHSPPSFTCFDCYMSYWDRWNSSPNG 120

Query: 121 ELIHQAIEAFEEQLANGEKSSKNVKGKKREKIGRQSSDKPVNVVAPPLPPLPEVLPLPID 180
           ELIHQAIEAFEEQLANGEKSSKNVKGKKREKIGRQSSDKPVNVVAPPLPPLPEVLPLPID
Sbjct: 121 ELIHQAIEAFEEQLANGEKSSKNVKGKKREKIGRQSSDKPVNVVAPPLPPLPEVLPLPID 180

Query: 181 EGSSAAPTTSGTDDVEAAEGKGEPSRTEDETAVMIVPSPPPSNRKGLARKVWPDVLGLFN 240
           EGSSAAPTTSGTDDVEAAEGKGEPSRTEDETAVMIVPSPPPSNRKGLARKVWPDVLGLFN
Sbjct: 181 EGSSAAPTTSGTDDVEAAEGKGEPSRTEDETAVMIVPSPPPSNRKGLARKVWPDVLGLFN 240

Query: 241 SRLWSLWGPH 251
           SRLWSLWGPH
Sbjct: 241 SRLWSLWGPH 250

BLAST of Carg11588 vs. NCBI nr
Match: KAG6576126.1 (hypothetical protein SDJN03_26765, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 479.6 bits (1233), Expect = 1.7e-131
Identity = 249/254 (98.03%), Postives = 249/254 (98.03%), Query Frame = 0

Query: 1   MKIKNKGKVHPSP----SSSSSSSSSSDGDFFEVFNYLPVAMLALISLLTVDDREVLAFM 60
           MKIKNKGKVHPSP    SSSSSSSSSSDGDFFEVFNYLPVAMLALISLLTVDDREVLAFM
Sbjct: 1   MKIKNKGKVHPSPSSSSSSSSSSSSSSDGDFFEVFNYLPVAMLALISLLTVDDREVLAFM 60

Query: 61  MRRSMETSSTSSFVSGNKFSKRAPKKSTDPRASSGSACVHSPPSFTCFDCYMSYWDRWNS 120
           MRRSMETSSTSSFVSGNKFSKRAPKKST PRASSGSACVHSPPSFTCFDCYMSYWDRWNS
Sbjct: 61  MRRSMETSSTSSFVSGNKFSKRAPKKSTAPRASSGSACVHSPPSFTCFDCYMSYWDRWNS 120

Query: 121 SPNGELIHQAIEAFEEQLANGEKSSKNVKGKKREKIGRQSSDKPVNVVAPPLPPLPEVLP 180
           SPNGELIHQAIEAFEEQLANGEKSSKNVKGKKREKIGRQSSDKPVNVVAPPLPPLPEVLP
Sbjct: 121 SPNGELIHQAIEAFEEQLANGEKSSKNVKGKKREKIGRQSSDKPVNVVAPPLPPLPEVLP 180

Query: 181 LPIDEGSSAAPTTSGTDDVEAAEGKGEPSRTEDETAVMIVPSPPPSNRKGLARKVWPDVL 240
           LPIDEGSSAAPTTSGTDDVEAAEGKGEPSRTEDETAVMIVPSPPPSNRKGLARKVWPDVL
Sbjct: 181 LPIDEGSSAAPTTSGTDDVEAAEGKGEPSRTEDETAVMIVPSPPPSNRKGLARKVWPDVL 240

Query: 241 GLFNSRLWSLWGPH 251
           GLFNSRLWSLWGPH
Sbjct: 241 GLFNSRLWSLWGPH 254

BLAST of Carg11588 vs. NCBI nr
Match: XP_022953880.1 (uncharacterized protein LOC111456285 [Cucurbita moschata])

HSP 1 Score: 475.3 bits (1222), Expect = 3.2e-130
Identity = 246/250 (98.40%), Postives = 247/250 (98.80%), Query Frame = 0

Query: 1   MKIKNKGKVHPSPSSSSSSSSSSDGDFFEVFNYLPVAMLALISLLTVDDREVLAFMMRRS 60
           MKIKNKGKVHPSP SSSSSSSSSDGDFFEVFNYLPVAMLALISLLTVDDREVLAFMMRRS
Sbjct: 1   MKIKNKGKVHPSP-SSSSSSSSSDGDFFEVFNYLPVAMLALISLLTVDDREVLAFMMRRS 60

Query: 61  METSSTSSFVSGNKFSKRAPKKSTDPRASSGSACVHSPPSFTCFDCYMSYWDRWNSSPNG 120
           METSSTSSFVSGNKFSKRAPKKST PRASSGSACVHSPPSFTCFDCYMSYWDRWNSSPNG
Sbjct: 61  METSSTSSFVSGNKFSKRAPKKSTAPRASSGSACVHSPPSFTCFDCYMSYWDRWNSSPNG 120

Query: 121 ELIHQAIEAFEEQLANGEKSSKNVKGKKREKIGRQSSDKPVNVVAPPLPPLPEVLPLPID 180
           ELIHQAIEAFEEQLANGEKSSKNVKGKKREKIGRQSSDKPVNVVAPPLPPLP VLPLPID
Sbjct: 121 ELIHQAIEAFEEQLANGEKSSKNVKGKKREKIGRQSSDKPVNVVAPPLPPLPGVLPLPID 180

Query: 181 EGSSAAPTTSGTDDVEAAEGKGEPSRTEDETAVMIVPSPPPSNRKGLARKVWPDVLGLFN 240
           EGSSAAPTTSG+DDVEAAEGKGEPSRTEDETAVMIVPSPPPSNRKGLARKVWPDVLGLFN
Sbjct: 181 EGSSAAPTTSGSDDVEAAEGKGEPSRTEDETAVMIVPSPPPSNRKGLARKVWPDVLGLFN 240

Query: 241 SRLWSLWGPH 251
           SRLWSLWGPH
Sbjct: 241 SRLWSLWGPH 249

BLAST of Carg11588 vs. NCBI nr
Match: XP_023547231.1 (uncharacterized protein LOC111806103 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 473.8 bits (1218), Expect = 9.3e-130
Identity = 242/250 (96.80%), Postives = 248/250 (99.20%), Query Frame = 0

Query: 1   MKIKNKGKVHPSPSSSSSSSSSSDGDFFEVFNYLPVAMLALISLLTVDDREVLAFMMRRS 60
           MKIKNKGKVHPSPSSSSSSSSSSDGDFFEVFNYLPVA+LALIS+LT+DDREVLAFMMRRS
Sbjct: 1   MKIKNKGKVHPSPSSSSSSSSSSDGDFFEVFNYLPVAILALISVLTLDDREVLAFMMRRS 60

Query: 61  METSSTSSFVSGNKFSKRAPKKSTDPRASSGSACVHSPPSFTCFDCYMSYWDRWNSSPNG 120
           METSS+SSFVSGNKFSKRAPKKST PRASSGSACVHSPPSFTCFDCYMS+WDRWNSSPNG
Sbjct: 61  METSSSSSFVSGNKFSKRAPKKSTVPRASSGSACVHSPPSFTCFDCYMSFWDRWNSSPNG 120

Query: 121 ELIHQAIEAFEEQLANGEKSSKNVKGKKREKIGRQSSDKPVNVVAPPLPPLPEVLPLPID 180
           ELIHQAIEAFEEQLANGEKSSKNVKGKKREKIGRQSSDKPVNVVAPPLPPLPEVLPLP D
Sbjct: 121 ELIHQAIEAFEEQLANGEKSSKNVKGKKREKIGRQSSDKPVNVVAPPLPPLPEVLPLPND 180

Query: 181 EGSSAAPTTSGTDDVEAAEGKGEPSRTEDETAVMIVPSPPPSNRKGLARKVWPDVLGLFN 240
           EGSSAAPTTSG+DDVEAAEGKGEPSRTEDETAVMIVPSPPPSNRKGLARKVWPDVLGLFN
Sbjct: 181 EGSSAAPTTSGSDDVEAAEGKGEPSRTEDETAVMIVPSPPPSNRKGLARKVWPDVLGLFN 240

Query: 241 SRLWSLWGPH 251
           SRLWSLWGPH
Sbjct: 241 SRLWSLWGPH 250

BLAST of Carg11588 vs. NCBI nr
Match: XP_022991379.1 (uncharacterized protein LOC111488030 [Cucurbita maxima])

HSP 1 Score: 443.7 bits (1140), Expect = 1.0e-120
Identity = 231/249 (92.77%), Postives = 237/249 (95.18%), Query Frame = 0

Query: 1   MKIKNKGKVHPSPSSSSSSSSSSDGDFFEVFNYLPVAMLALISLLTVDDREVLAFMMRRS 60
           MKIKNKGKVHPSP     SSSSSDGDFFEVFNYLPVA+LALIS+LT DDREVLAFMMRRS
Sbjct: 1   MKIKNKGKVHPSP-----SSSSSDGDFFEVFNYLPVAILALISVLTADDREVLAFMMRRS 60

Query: 61  METSSTSSFVSGNKFSKRAPKKSTDPRASSGSACVHSPPSFTCFDCYMSYWDRWNSSPNG 120
           METSSTSS VSGNKFSKRAPKKST PRASSGSACVHSPPSFTCFDCYMSYWDRWNSSPNG
Sbjct: 61  METSSTSSVVSGNKFSKRAPKKSTAPRASSGSACVHSPPSFTCFDCYMSYWDRWNSSPNG 120

Query: 121 ELIHQAIEAFEEQLANGEKSSKNVKGKKREKIGRQSSDKPVNVVAPPLPPLPEVLPLPID 180
           ELIHQAIEAFEEQLANGEKS KNVKGKKREKIGRQSSDKPVNVVA   PPLPEVLPLPID
Sbjct: 121 ELIHQAIEAFEEQLANGEKSCKNVKGKKREKIGRQSSDKPVNVVA---PPLPEVLPLPID 180

Query: 181 EGSSAAPTTSGTDDVEAAEGKGEPSRTEDETAVMIVPSPPPSNRKGLARKVWPDVLGLFN 240
           EGSSAAPTTSG+D+VEAAEG+GEPSRTEDETAV+IVPSPPPSNRKGLARKVWPDVLGLFN
Sbjct: 181 EGSSAAPTTSGSDEVEAAEGRGEPSRTEDETAVVIVPSPPPSNRKGLARKVWPDVLGLFN 240

Query: 241 SRLWSLWGP 250
           SRLWSLWGP
Sbjct: 241 SRLWSLWGP 241

BLAST of Carg11588 vs. ExPASy TrEMBL
Match: A0A6J1GQW4 (uncharacterized protein LOC111456285 OS=Cucurbita moschata OX=3662 GN=LOC111456285 PE=4 SV=1)

HSP 1 Score: 475.3 bits (1222), Expect = 1.5e-130
Identity = 246/250 (98.40%), Postives = 247/250 (98.80%), Query Frame = 0

Query: 1   MKIKNKGKVHPSPSSSSSSSSSSDGDFFEVFNYLPVAMLALISLLTVDDREVLAFMMRRS 60
           MKIKNKGKVHPSP SSSSSSSSSDGDFFEVFNYLPVAMLALISLLTVDDREVLAFMMRRS
Sbjct: 1   MKIKNKGKVHPSP-SSSSSSSSSDGDFFEVFNYLPVAMLALISLLTVDDREVLAFMMRRS 60

Query: 61  METSSTSSFVSGNKFSKRAPKKSTDPRASSGSACVHSPPSFTCFDCYMSYWDRWNSSPNG 120
           METSSTSSFVSGNKFSKRAPKKST PRASSGSACVHSPPSFTCFDCYMSYWDRWNSSPNG
Sbjct: 61  METSSTSSFVSGNKFSKRAPKKSTAPRASSGSACVHSPPSFTCFDCYMSYWDRWNSSPNG 120

Query: 121 ELIHQAIEAFEEQLANGEKSSKNVKGKKREKIGRQSSDKPVNVVAPPLPPLPEVLPLPID 180
           ELIHQAIEAFEEQLANGEKSSKNVKGKKREKIGRQSSDKPVNVVAPPLPPLP VLPLPID
Sbjct: 121 ELIHQAIEAFEEQLANGEKSSKNVKGKKREKIGRQSSDKPVNVVAPPLPPLPGVLPLPID 180

Query: 181 EGSSAAPTTSGTDDVEAAEGKGEPSRTEDETAVMIVPSPPPSNRKGLARKVWPDVLGLFN 240
           EGSSAAPTTSG+DDVEAAEGKGEPSRTEDETAVMIVPSPPPSNRKGLARKVWPDVLGLFN
Sbjct: 181 EGSSAAPTTSGSDDVEAAEGKGEPSRTEDETAVMIVPSPPPSNRKGLARKVWPDVLGLFN 240

Query: 241 SRLWSLWGPH 251
           SRLWSLWGPH
Sbjct: 241 SRLWSLWGPH 249

BLAST of Carg11588 vs. ExPASy TrEMBL
Match: A0A6J1JUQ5 (uncharacterized protein LOC111488030 OS=Cucurbita maxima OX=3661 GN=LOC111488030 PE=4 SV=1)

HSP 1 Score: 443.7 bits (1140), Expect = 5.0e-121
Identity = 231/249 (92.77%), Postives = 237/249 (95.18%), Query Frame = 0

Query: 1   MKIKNKGKVHPSPSSSSSSSSSSDGDFFEVFNYLPVAMLALISLLTVDDREVLAFMMRRS 60
           MKIKNKGKVHPSP     SSSSSDGDFFEVFNYLPVA+LALIS+LT DDREVLAFMMRRS
Sbjct: 1   MKIKNKGKVHPSP-----SSSSSDGDFFEVFNYLPVAILALISVLTADDREVLAFMMRRS 60

Query: 61  METSSTSSFVSGNKFSKRAPKKSTDPRASSGSACVHSPPSFTCFDCYMSYWDRWNSSPNG 120
           METSSTSS VSGNKFSKRAPKKST PRASSGSACVHSPPSFTCFDCYMSYWDRWNSSPNG
Sbjct: 61  METSSTSSVVSGNKFSKRAPKKSTAPRASSGSACVHSPPSFTCFDCYMSYWDRWNSSPNG 120

Query: 121 ELIHQAIEAFEEQLANGEKSSKNVKGKKREKIGRQSSDKPVNVVAPPLPPLPEVLPLPID 180
           ELIHQAIEAFEEQLANGEKS KNVKGKKREKIGRQSSDKPVNVVA   PPLPEVLPLPID
Sbjct: 121 ELIHQAIEAFEEQLANGEKSCKNVKGKKREKIGRQSSDKPVNVVA---PPLPEVLPLPID 180

Query: 181 EGSSAAPTTSGTDDVEAAEGKGEPSRTEDETAVMIVPSPPPSNRKGLARKVWPDVLGLFN 240
           EGSSAAPTTSG+D+VEAAEG+GEPSRTEDETAV+IVPSPPPSNRKGLARKVWPDVLGLFN
Sbjct: 181 EGSSAAPTTSGSDEVEAAEGRGEPSRTEDETAVVIVPSPPPSNRKGLARKVWPDVLGLFN 240

Query: 241 SRLWSLWGP 250
           SRLWSLWGP
Sbjct: 241 SRLWSLWGP 241

BLAST of Carg11588 vs. ExPASy TrEMBL
Match: A0A1S3CC21 (uncharacterized protein LOC103499074 OS=Cucumis melo OX=3656 GN=LOC103499074 PE=4 SV=1)

HSP 1 Score: 370.2 bits (949), Expect = 7.0e-99
Identity = 194/255 (76.08%), Postives = 217/255 (85.10%), Query Frame = 0

Query: 1   MKIKNKGKVHPSPSSSSSSSSSSDGDFFEVFNYLPVAMLALISLLTVDDREVLAFMMRRS 60
           MKIKNKGKVHPSP SSSSSSSSSDG+FF+V NYLPVA+ AL+S+LTVDDREVLAFMMRRS
Sbjct: 1   MKIKNKGKVHPSP-SSSSSSSSSDGNFFDVLNYLPVAIFALVSVLTVDDREVLAFMMRRS 60

Query: 61  METSSTSSFVSGNKFSKRAPKKSTDPRASSGSACVHSPPSFTCFDCYMSYWDRWNSSPNG 120
           METSS SS VSG KFSKR  KKS  PRA S SACVH+PPS TCFDCYMSYWDRWNSSPNG
Sbjct: 61  METSSPSSSVSGKKFSKRVSKKSDTPRAGSRSACVHAPPSLTCFDCYMSYWDRWNSSPNG 120

Query: 121 ELIHQAIEAFEEQLANGEKSSKNVKGKKREKIGRQSSDKPVNVVAPPLPPLPEVLPLPID 180
           ELIHQAIEAFEEQLA GEKSSKNVKGK+++KIGR+S DK +N+V+PPL P+PE  PL ID
Sbjct: 121 ELIHQAIEAFEEQLAKGEKSSKNVKGKRKDKIGRRSLDKSLNIVSPPLLPVPETHPLQID 180

Query: 181 EGSSAAPTTSGTDDVEAAEGKGEPSRTEDET-----AVMIVPSPPPSNRKGLARKVWPDV 240
           EGSSAAP TSG+  VE  E  GE  R+E+E      A++++PSPPP+  KGLARKVWPDV
Sbjct: 181 EGSSAAPATSGSAAVEVEEKSGEAPRSEEEAVESRGALVVIPSPPPNIHKGLARKVWPDV 240

Query: 241 LGLFNSRLWSLWGPH 251
           LGLFNSRLWSLW P+
Sbjct: 241 LGLFNSRLWSLWSPN 254

BLAST of Carg11588 vs. ExPASy TrEMBL
Match: A0A5D3DM01 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G002230 PE=4 SV=1)

HSP 1 Score: 369.8 bits (948), Expect = 9.1e-99
Identity = 194/256 (75.78%), Postives = 218/256 (85.16%), Query Frame = 0

Query: 1   MKIKNKGKVHPSP-SSSSSSSSSSDGDFFEVFNYLPVAMLALISLLTVDDREVLAFMMRR 60
           MKIKNKGKVHPSP SSSSSSSSSSDG+FF+V NYLPVA+ AL+S+LTVDDREVLAFMMRR
Sbjct: 1   MKIKNKGKVHPSPSSSSSSSSSSSDGNFFDVLNYLPVAIFALVSVLTVDDREVLAFMMRR 60

Query: 61  SMETSSTSSFVSGNKFSKRAPKKSTDPRASSGSACVHSPPSFTCFDCYMSYWDRWNSSPN 120
           SMETSS SS VSG +FSKR  KKS  PRA S SACVH+PPS TCFDCYMSYWDRWNSSPN
Sbjct: 61  SMETSSPSSSVSGKRFSKRVSKKSDTPRAGSRSACVHAPPSLTCFDCYMSYWDRWNSSPN 120

Query: 121 GELIHQAIEAFEEQLANGEKSSKNVKGKKREKIGRQSSDKPVNVVAPPLPPLPEVLPLPI 180
           GELIHQAIEAFEEQLA GEKSSKNVKGK+++KIGR+S DK +N+V+PPL P+PE  PL I
Sbjct: 121 GELIHQAIEAFEEQLAKGEKSSKNVKGKRKDKIGRRSLDKSLNIVSPPLFPVPETHPLQI 180

Query: 181 DEGSSAAPTTSGTDDVEAAEGKGEPSRTEDET-----AVMIVPSPPPSNRKGLARKVWPD 240
           DEGSSAAP TSG+  VE  E  GE  R+E+E      A++++PSPPP+  KGLARKVWPD
Sbjct: 181 DEGSSAAPATSGSAAVEVEEKSGEAPRSEEEAVESGGALVVIPSPPPNIHKGLARKVWPD 240

Query: 241 VLGLFNSRLWSLWGPH 251
           VLGLFNSRLWSLW P+
Sbjct: 241 VLGLFNSRLWSLWSPN 256

BLAST of Carg11588 vs. ExPASy TrEMBL
Match: A0A6J1H8S8 (uncharacterized protein LOC111461129 OS=Cucurbita moschata OX=3662 GN=LOC111461129 PE=4 SV=1)

HSP 1 Score: 362.8 bits (930), Expect = 1.1e-96
Identity = 190/250 (76.00%), Postives = 214/250 (85.60%), Query Frame = 0

Query: 1   MKIKNKGKVHPSPSSSSSSSSSSDGDFFEVFNYLPVAMLALISLLTVDDREVLAFMMRRS 60
           MKIKNKGKVHPSP  SSS SSSSDGDFF+VFNYLP A+LAL+++LT+DDREVLAFMMRRS
Sbjct: 1   MKIKNKGKVHPSP--SSSPSSSSDGDFFDVFNYLPAAILALLTVLTIDDREVLAFMMRRS 60

Query: 61  METSSTSSFVSGNKFSKRAPKKSTDPRASSGSACVHSPPSFTCFDCYMSYWDRWNSSPNG 120
           METS+ SS  S NKFSKR  KKS  PRA+SGS CVH+PPS +CFDCYMSYW+RWNSSPNG
Sbjct: 61  METSTPSSSPSENKFSKRGSKKSGAPRANSGSVCVHAPPSLSCFDCYMSYWNRWNSSPNG 120

Query: 121 ELIHQAIEAFEEQLANGEKSSKNVKGKKREKIGRQSSDKPVNVVAPPLPPLPEVLPLPID 180
           ELIHQAIEAFEEQLANGEKS KN+K K+++KIGR+SS+KPV+V     PPLPEVLPL ID
Sbjct: 121 ELIHQAIEAFEEQLANGEKSGKNIKCKRKDKIGRRSSEKPVDVAPLSPPPLPEVLPLAID 180

Query: 181 EGSSAAPTTSGTDDVEAAEGKGEPSRTEDETAVMIVPSPPPSNRKGLARKVWPDVLGLFN 240
           +G S AP TS +  VEAAEG GE  RTE   A+++VPS PPSN KGLARKVWPDVLGLFN
Sbjct: 181 DG-SVAPATSVSGGVEAAEGSGELPRTEARAAMVVVPSSPPSNHKGLARKVWPDVLGLFN 240

Query: 241 SRLWSLWGPH 251
           SRLWSLWGP+
Sbjct: 241 SRLWSLWGPN 247

BLAST of Carg11588 vs. TAIR 10
Match: AT5G13090.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G24270.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 148.7 bits (374), Expect = 6.4e-36
Identity = 113/278 (40.65%), Postives = 150/278 (53.96%), Query Frame = 0

Query: 1   MKIKNKGKVHPSP-----SSSSSSSSS----SDGDFFEVFNYLPVAMLALISLLTVDDRE 60
           MK+K KGKV+PSP     SSSSSSSS+     D D   V   LP  +L L+S+L+ ++RE
Sbjct: 1   MKMKKKGKVYPSPPPPPQSSSSSSSSNHLNEEDDDSLSVLKLLPATILVLVSVLSSEERE 60

Query: 61  VLAFMMRRSMETSSTSSFVSGNKFSKRAPKKSTDPRASSGSACVHSPPSF--TCFDCYMS 120
           VLA+++ R    S   +  S NK  K++ K S +          H PP F   CFDCY +
Sbjct: 61  VLAYLITRGTTISDRGNSSSKNKTKKKSNKSSKN----------HKPPVFDCECFDCYTN 120

Query: 121 YWDRWNSSPNGELIHQAIEAFEEQLA--NGEKSSKNVKGKKREKIGRQSSD---KPVNVV 180
           YW RW+SSPN ELIH+ IEAFE      N    SK+ +GKK+EK GR+ +D   KP   V
Sbjct: 121 YWFRWDSSPNRELIHEIIEAFENHHGEENSASRSKSKRGKKKEKPGRRVTDSDSKPALRV 180

Query: 181 AP--PLPPLPEVLPLPIDEGSSAAPTTSGTDDVEAAEGKGEP--------SRTEDETAVM 240
                    P V P+     S ++  +S     EA   +GEP           E+E+ V+
Sbjct: 181 TDNGDKDSKPVVEPMNETTVSESSHVSSPVRLSEAEVAEGEPEDEIVVEEDGQEEESTVV 240

Query: 241 IVPSPPP--SNRKGLARKVWPDVLGLFNSRLWSLWGPH 251
           + P+     +  KGLARKV PDVLGLF+S  W LW P+
Sbjct: 241 VFPAAASNVTGHKGLARKVLPDVLGLFHSNFWRLWNPN 268

BLAST of Carg11588 vs. TAIR 10
Match: AT1G24270.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G13090.1); Has 84 Blast hits to 83 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 84; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 100.1 bits (248), Expect = 2.6e-21
Identity = 70/164 (42.68%), Postives = 92/164 (56.10%), Query Frame = 0

Query: 1   MKIKNKGKVHPSPSSSSSSSSSSDGDFFEVFNYLPVAMLALISLLTVDDREVLAFMMRRS 60
           MK+  KGKVHPSP   SSSSS+ D D   VF  L  A+L L+S+L+ +D EVLA+++ RS
Sbjct: 55  MKVMKKGKVHPSPPLPSSSSSNGD-DSLSVFKLLQSAILVLVSVLSAEDLEVLAYLITRS 114

Query: 61  METSSTSSFVSGNKFSKRAPKKSTDPRASSGSACVHSPPSFTCFDCYMSYWDRWNSSPNG 120
           + T++  S     K S +AP                      CFDCY SYW +W+SS N 
Sbjct: 115 LNTTNVVS--CKKKRSHKAPLLDCQ-----------------CFDCYTSYWSKWDSSSNR 174

Query: 121 ELIHQAIEAFEEQLANGEKSSKNV--KGKKREKIGRQSSDKPVN 163
           ELI+Q IEAFE+ L   E S+ +   K KKR K    S ++P N
Sbjct: 175 ELINQIIEAFEDHLTRDEISASHTSKKNKKRAKKIEISEEQPQN 198

BLAST of Carg11588 vs. TAIR 10
Match: AT1G12020.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G62422.1); Has 89 Blast hits to 88 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 87; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 85.1 bits (209), Expect = 8.6e-17
Identity = 60/159 (37.74%), Postives = 87/159 (54.72%), Query Frame = 0

Query: 2   KIKNKGKVHPSPSSSSSSSSSSDGDFFEVFNYLPVAMLALISLLTVDDREVLAFMMRRSM 61
           K+  KG VHPSP    S+          +   LPVA+ +L ++L+ +DREVLA+++    
Sbjct: 3   KLYRKGTVHPSPPQIKSND--------HLLTLLPVAIFSLAAVLSPEDREVLAYLI---- 62

Query: 62  ETSSTSSFVSGNKFSKRAPKKSTDPRASSGSACVHSPP-SFTCFDCYMSYWDRWNSSPNG 121
              ST+S+      + R  K     +A   +   HSP     CF CY SYW RW+SSP+ 
Sbjct: 63  ---STASYSGERNPTSRLNKTKAHKKALFDN---HSPLFHCDCFSCYTSYWVRWDSSPSR 122

Query: 122 ELIHQAIEAFEEQLANGEKSSKNVKGKK--REKIGRQSS 158
           +LIH+ I+AFE+ L   +   KNV GKK  R++ G+ SS
Sbjct: 123 QLIHEIIDAFEDSLEKNKNKKKNVTGKKDRRKRSGKSSS 143

BLAST of Carg11588 vs. TAIR 10
Match: AT1G62422.1 (unknown protein; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G12020.1); Has 87 Blast hits to 86 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 87; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 73.9 bits (180), Expect = 2.0e-13
Identity = 52/157 (33.12%), Postives = 82/157 (52.23%), Query Frame = 0

Query: 2   KIKNKGKVHPSPSSSSSSSSSSDGDFFEVFNYLPVAMLALISLLTVDDREVLAFMMRRSM 61
           K+  KG VHPSP  +  +         +  + LPVA+L+L++ L+V+DREVLA+++  S 
Sbjct: 3   KLCRKGTVHPSPPPAIKTDE-------QFLSLLPVAILSLVAALSVEDREVLAYLISNSG 62

Query: 62  ETSSTSSFVSGNKFSKRAPKKSTDPRASSGSACVHSPPSF--TCFDCYMSYWDRWNSSPN 121
           ++         N+ S+    K  +          H  P F   CF CY SYW RW++SP 
Sbjct: 63  DS---------NRISRLKKNKEDN----------HHSPLFLCDCFSCYTSYWVRWDTSPR 122

Query: 122 GELIHQAIEAFEEQLANGEKSSKNVKGKKREKIGRQS 157
            +LIH+ I+A+E+ L       K  K  +R++ G+ S
Sbjct: 123 RQLIHEIIDAYEDSL-----EMKKKKKDRRKRSGKAS 128

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAG7014644.13.6e-134100.00hypothetical protein SDJN02_24823, partial [Cucurbita argyrosperma subsp. argyro... [more]
KAG6576126.11.7e-13198.03hypothetical protein SDJN03_26765, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022953880.13.2e-13098.40uncharacterized protein LOC111456285 [Cucurbita moschata][more]
XP_023547231.19.3e-13096.80uncharacterized protein LOC111806103 [Cucurbita pepo subsp. pepo][more]
XP_022991379.11.0e-12092.77uncharacterized protein LOC111488030 [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1GQW41.5e-13098.40uncharacterized protein LOC111456285 OS=Cucurbita moschata OX=3662 GN=LOC1114562... [more]
A0A6J1JUQ55.0e-12192.77uncharacterized protein LOC111488030 OS=Cucurbita maxima OX=3661 GN=LOC111488030... [more]
A0A1S3CC217.0e-9976.08uncharacterized protein LOC103499074 OS=Cucumis melo OX=3656 GN=LOC103499074 PE=... [more]
A0A5D3DM019.1e-9975.78Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A6J1H8S81.1e-9676.00uncharacterized protein LOC111461129 OS=Cucurbita moschata OX=3662 GN=LOC1114611... [more]
Match NameE-valueIdentityDescription
AT5G13090.16.4e-3640.65unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT1G24270.12.6e-2142.68unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT1G12020.18.6e-1737.74unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT1G62422.12.0e-1333.12unknown protein; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth ... [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..24
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 141..156
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 137..227
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 9..24
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 66..95
NoneNo IPR availablePANTHERPTHR31903:SF4OS02G0507600 PROTEINcoord: 1..249
NoneNo IPR availablePANTHERPTHR31903F12F1.11-RELATEDcoord: 1..249

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg11588-RACarg11588-RAmRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane