Carg11587 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg11587
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Unknown protein
Location	Carg_Chr17: 9872933 .. 9873938 (+)
RNA-Seq Expression	Carg11587
Synteny	Carg11587

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGGGTGTAACTCTGGCGGTGGCTCCACGAACAGACCCAAATGACGCGGTGGCGCCGCAGCACAAGCCGCTACGGCGGCAACAACAAGAGCAGAACTCGGTTGTTGGAGGGGTGATGGGATCTCTCCGCGTCATTGAACTCCAACTTGTTGCTTTCATAATGGTGTTCTCTGCGAGCGGGCTTGTCCCCGTTCTCGACCTGATTTTCCCTGCCTTCACCTCCGCCTACCTCCTCTTGCTGGCACGGTTTGCATTCCCGTCTCACGGCCACGCGTCGGGCGCGTCGCAGGAGATCTTTCAGGCAATGTTAAATGTTTAGTACGCCTAACAAATTGGGAGTGTAGTTGGATTGATTTGACTGATTGATGTTTAAAACTGCGGTTTGTTGTTACAGGGGAGCAAGTTGTTTAGAATGTACGTGGTGGTGGGGACCACGATAGGGCTGTTCCTGCCACTGGCATATGTATTGGGTGGGTTTGCGAGAAGTGACGAGCATGCGGTTCGGTCGGCGACTCCGCATCTGTTTTTGTTGTCGTTTCAGATTCTGACGGAGAATGTGATAAGTGGGTTGTCGTTGTTCTCGCCGCCGGTGAGAGCATTGGTGCCGGTTCTGTACACGGTGAGGAGGATTTTCGTGATCATGGATTGGATGAAGGATGTTTGGCTCAACAAAACCTTGCCGGCCAATGCACCCATCAACGTATTTTTCTTCTCCTCCTCCTCCTCCTCCTCCTCTGTTCCTACAGTATTAATTACAATGGGTTTATTTAGTTTTATAAAAATGGCAGGACATAGCATGGTTTTGGTTCGGAAGGACATTAGCGGTGGCTAATTTTGCGTATTTCTGCATAAATCTATTTGGATTTTTAATCCCAAGATTCATTCCAAGGGCATTCCAAAGGTATTTTAAGGACCGAGATGACGAGACGCATGCCAAAATCCAAGAAGACAACCTCTCTTCCGCTCCCCCTAAATCTCACCCCTCCGATAAGAAGACCGATTGA

mRNA sequence

ATGTCGGGTGTAACTCTGGCGGTGGCTCCACGAACAGACCCAAATGACGCGGTGGCGCCGCAGCACAAGCCGCTACGGCGGCAACAACAAGAGCAGAACTCGGTTGTTGGAGGGGTGATGGGATCTCTCCGCGTCATTGAACTCCAACTTGTTGCTTTCATAATGGTGTTCTCTGCGAGCGGGCTTGTCCCCGTTCTCGACCTGATTTTCCCTGCCTTCACCTCCGCCTACCTCCTCTTGCTGGCACGGTTTGCATTCCCGTCTCACGGCCACGCGTCGGGCGCGTCGCAGGAGATCTTTCAGGCAATGTTAAATGGGAGCAAGTTGTTTAGAATGTACGTGGTGGTGGGGACCACGATAGGGCTGTTCCTGCCACTGGCATATGTATTGGGTGGGTTTGCGAGAAGTGACGAGCATGCGGTTCGGTCGGCGACTCCGCATCTGTTTTTGTTGTCGTTTCAGATTCTGACGGAGAATGTGATAAGTGGGTTGTCGTTGTTCTCGCCGCCGGTGAGAGCATTGGTGCCGGTTCTGTACACGGTGAGGAGGATTTTCGTGATCATGGATTGGATGAAGGATGTTTGGCTCAACAAAACCTTGCCGGCCAATGCACCCATCAACGACATAGCATGGTTTTGGTTCGGAAGGACATTAGCGGTGGCTAATTTTGCGTATTTCTGCATAAATCTATTTGGATTTTTAATCCCAAGATTCATTCCAAGGGCATTCCAAAGGTATTTTAAGGACCGAGATGACGAGACGCATGCCAAAATCCAAGAAGACAACCTCTCTTCCGCTCCCCCTAAATCTCACCCCTCCGATAAGAAGACCGATTGA

Coding sequence (CDS)

ATGTCGGGTGTAACTCTGGCGGTGGCTCCACGAACAGACCCAAATGACGCGGTGGCGCCGCAGCACAAGCCGCTACGGCGGCAACAACAAGAGCAGAACTCGGTTGTTGGAGGGGTGATGGGATCTCTCCGCGTCATTGAACTCCAACTTGTTGCTTTCATAATGGTGTTCTCTGCGAGCGGGCTTGTCCCCGTTCTCGACCTGATTTTCCCTGCCTTCACCTCCGCCTACCTCCTCTTGCTGGCACGGTTTGCATTCCCGTCTCACGGCCACGCGTCGGGCGCGTCGCAGGAGATCTTTCAGGCAATGTTAAATGGGAGCAAGTTGTTTAGAATGTACGTGGTGGTGGGGACCACGATAGGGCTGTTCCTGCCACTGGCATATGTATTGGGTGGGTTTGCGAGAAGTGACGAGCATGCGGTTCGGTCGGCGACTCCGCATCTGTTTTTGTTGTCGTTTCAGATTCTGACGGAGAATGTGATAAGTGGGTTGTCGTTGTTCTCGCCGCCGGTGAGAGCATTGGTGCCGGTTCTGTACACGGTGAGGAGGATTTTCGTGATCATGGATTGGATGAAGGATGTTTGGCTCAACAAAACCTTGCCGGCCAATGCACCCATCAACGACATAGCATGGTTTTGGTTCGGAAGGACATTAGCGGTGGCTAATTTTGCGTATTTCTGCATAAATCTATTTGGATTTTTAATCCCAAGATTCATTCCAAGGGCATTCCAAAGGTATTTTAAGGACCGAGATGACGAGACGCATGCCAAAATCCAAGAAGACAACCTCTCTTCCGCTCCCCCTAAATCTCACCCCTCCGATAAGAAGACCGATTGA

Protein sequence

MSGVTLAVAPRTDPNDAVAPQHKPLRRQQQEQNSVVGGVMGSLRVIELQLVAFIMVFSASGLVPVLDLIFPAFTSAYLLLLARFAFPSHGHASGASQEIFQAMLNGSKLFRMYVVVGTTIGLFLPLAYVLGGFARSDEHAVRSATPHLFLLSFQILTENVISGLSLFSPPVRALVPVLYTVRRIFVIMDWMKDVWLNKTLPANAPINDIAWFWFGRTLAVANFAYFCINLFGFLIPRFIPRAFQRYFKDRDDETHAKIQEDNLSSAPPKSHPSDKKTD

Homology

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BLAST of Carg11587 vs. NCBI nr
Match: KAG7014643.1 (hypothetical protein SDJN02_24822, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 543.9 bits (1400), Expect = 8.1e-151
Identity = 278/278 (100.00%), Postives = 278/278 (100.00%), Query Frame = 0


Query: 1   MSGVTLAVAPRTDPNDAVAPQHKPLRRQQQEQNSVVGGVMGSLRVIELQLVAFIMVFSAS 60
           MSGVTLAVAPRTDPNDAVAPQHKPLRRQQQEQNSVVGGVMGSLRVIELQLVAFIMVFSAS
Sbjct: 1   MSGVTLAVAPRTDPNDAVAPQHKPLRRQQQEQNSVVGGVMGSLRVIELQLVAFIMVFSAS 60

Query: 61  GLVPVLDLIFPAFTSAYLLLLARFAFPSHGHASGASQEIFQAMLNGSKLFRMYVVVGTTI 120
           GLVPVLDLIFPAFTSAYLLLLARFAFPSHGHASGASQEIFQAMLNGSKLFRMYVVVGTTI
Sbjct: 61  GLVPVLDLIFPAFTSAYLLLLARFAFPSHGHASGASQEIFQAMLNGSKLFRMYVVVGTTI 120

Query: 121 GLFLPLAYVLGGFARSDEHAVRSATPHLFLLSFQILTENVISGLSLFSPPVRALVPVLYT 180
           GLFLPLAYVLGGFARSDEHAVRSATPHLFLLSFQILTENVISGLSLFSPPVRALVPVLYT
Sbjct: 121 GLFLPLAYVLGGFARSDEHAVRSATPHLFLLSFQILTENVISGLSLFSPPVRALVPVLYT 180

Query: 181 VRRIFVIMDWMKDVWLNKTLPANAPINDIAWFWFGRTLAVANFAYFCINLFGFLIPRFIP 240
           VRRIFVIMDWMKDVWLNKTLPANAPINDIAWFWFGRTLAVANFAYFCINLFGFLIPRFIP
Sbjct: 181 VRRIFVIMDWMKDVWLNKTLPANAPINDIAWFWFGRTLAVANFAYFCINLFGFLIPRFIP 240

Query: 241 RAFQRYFKDRDDETHAKIQEDNLSSAPPKSHPSDKKTD 279
           RAFQRYFKDRDDETHAKIQEDNLSSAPPKSHPSDKKTD
Sbjct: 241 RAFQRYFKDRDDETHAKIQEDNLSSAPPKSHPSDKKTD 278

[Close]

BLAST of Carg11587 vs. NCBI nr
Match: XP_022954375.1 (uncharacterized protein LOC111456631 [Cucurbita moschata])

HSP 1 Score: 530.4 bits (1365), Expect = 9.3e-147
Identity = 273/278 (98.20%), Postives = 274/278 (98.56%), Query Frame = 0


Query: 1   MSGVTLAVAPRTDPNDAVAPQHKPLRRQQQEQNSVVGGVMGSLRVIELQLVAFIMVFSAS 60
           MSGVTLAVAPRTDPNDAVAPQHKPLRRQQQEQNSVVGGVMGSLRVIELQLVAFIMVFSAS
Sbjct: 1   MSGVTLAVAPRTDPNDAVAPQHKPLRRQQQEQNSVVGGVMGSLRVIELQLVAFIMVFSAS 60

Query: 61  GLVPVLDLIFPAFTSAYLLLLARFAFPSHGHASGASQEIFQAMLNGSKLFRMYVVVGTTI 120
           GLVP+LDLIFPAFTSAYLLLLARFAFPSHGHASGASQEIFQ    GSKLFRMYVVVGTTI
Sbjct: 61  GLVPILDLIFPAFTSAYLLLLARFAFPSHGHASGASQEIFQ----GSKLFRMYVVVGTTI 120

Query: 121 GLFLPLAYVLGGFARSDEHAVRSATPHLFLLSFQILTENVISGLSLFSPPVRALVPVLYT 180
           GLFLPLAYVLGGFARSDEHAVRSATPHLFLLSFQILTENVISGLSLFSPPVRALVPVLYT
Sbjct: 121 GLFLPLAYVLGGFARSDEHAVRSATPHLFLLSFQILTENVISGLSLFSPPVRALVPVLYT 180

Query: 181 VRRIFVIMDWMKDVWLNKTLPANAPINDIAWFWFGRTLAVANFAYFCINLFGFLIPRFIP 240
           VRRIFVIMDWMKDVWLNKTLPANAPINDIAWFWFGRTLAVANFAYFCINLFGFLIPRFIP
Sbjct: 181 VRRIFVIMDWMKDVWLNKTLPANAPINDIAWFWFGRTLAVANFAYFCINLFGFLIPRFIP 240

Query: 241 RAFQRYFKDRDDETHAKIQEDNLSSAPPKSHPSDKKTD 279
           RAFQRYFKDRDDETHAKIQEDNLSSAPPKSHPSDKKTD
Sbjct: 241 RAFQRYFKDRDDETHAKIQEDNLSSAPPKSHPSDKKTD 274

[Close]

BLAST of Carg11587 vs. NCBI nr
Match: KAG6576125.1 (hypothetical protein SDJN03_26764, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 529.3 bits (1362), Expect = 2.1e-146
Identity = 273/278 (98.20%), Postives = 274/278 (98.56%), Query Frame = 0


Query: 1   MSGVTLAVAPRTDPNDAVAPQHKPLRRQQQEQNSVVGGVMGSLRVIELQLVAFIMVFSAS 60
           MSGVTLAVAPRTDPNDAVAPQHKPLRRQQQEQNSVVGGVMGSLRVIELQLVAFIMVFSAS
Sbjct: 1   MSGVTLAVAPRTDPNDAVAPQHKPLRRQQQEQNSVVGGVMGSLRVIELQLVAFIMVFSAS 60

Query: 61  GLVPVLDLIFPAFTSAYLLLLARFAFPSHGHASGASQEIFQAMLNGSKLFRMYVVVGTTI 120
           GLVPVLDLIFPAFTSAYLLLLARFAFPSHGHASGASQEIFQ    GSKLFR+YVVVGTTI
Sbjct: 61  GLVPVLDLIFPAFTSAYLLLLARFAFPSHGHASGASQEIFQ----GSKLFRVYVVVGTTI 120

Query: 121 GLFLPLAYVLGGFARSDEHAVRSATPHLFLLSFQILTENVISGLSLFSPPVRALVPVLYT 180
           GLFLPLAYVLGGFARSDEHAVRSATPHLFLLSFQILTENVISGLSLFSPPVRALVPVLYT
Sbjct: 121 GLFLPLAYVLGGFARSDEHAVRSATPHLFLLSFQILTENVISGLSLFSPPVRALVPVLYT 180

Query: 181 VRRIFVIMDWMKDVWLNKTLPANAPINDIAWFWFGRTLAVANFAYFCINLFGFLIPRFIP 240
           VRRIFVIMDWMKDVWLNKTLPANAPINDIAWFWFGRTLAVANFAYFCINLFGFLIPRFIP
Sbjct: 181 VRRIFVIMDWMKDVWLNKTLPANAPINDIAWFWFGRTLAVANFAYFCINLFGFLIPRFIP 240

Query: 241 RAFQRYFKDRDDETHAKIQEDNLSSAPPKSHPSDKKTD 279
           RAFQRYFKDRDDETHAKIQEDNLSSAPPKSHPSDKKTD
Sbjct: 241 RAFQRYFKDRDDETHAKIQEDNLSSAPPKSHPSDKKTD 274

[Close]

BLAST of Carg11587 vs. NCBI nr
Match: XP_023550142.1 (uncharacterized protein LOC111808420 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 523.1 bits (1346), Expect = 1.5e-144
Identity = 270/278 (97.12%), Postives = 272/278 (97.84%), Query Frame = 0


Query: 1   MSGVTLAVAPRTDPNDAVAPQHKPLRRQQQEQNSVVGGVMGSLRVIELQLVAFIMVFSAS 60
           MSGVTLAVAPRTDPNDAVAPQ KPL RQQQEQNSVVGGVMGSLRVIELQLVAFIMVFSAS
Sbjct: 1   MSGVTLAVAPRTDPNDAVAPQQKPLWRQQQEQNSVVGGVMGSLRVIELQLVAFIMVFSAS 60

Query: 61  GLVPVLDLIFPAFTSAYLLLLARFAFPSHGHASGASQEIFQAMLNGSKLFRMYVVVGTTI 120
           GLVP+LDLIFPAFTSAYLLLLARFAFPSHGHASGASQEIFQ    GSKLFRMYVVVGTTI
Sbjct: 61  GLVPILDLIFPAFTSAYLLLLARFAFPSHGHASGASQEIFQ----GSKLFRMYVVVGTTI 120

Query: 121 GLFLPLAYVLGGFARSDEHAVRSATPHLFLLSFQILTENVISGLSLFSPPVRALVPVLYT 180
           GLFLPLAYVLGGFARSDEHAVRSATPHLFLLSFQILTENVISGLSLFSPPVRALVPVLYT
Sbjct: 121 GLFLPLAYVLGGFARSDEHAVRSATPHLFLLSFQILTENVISGLSLFSPPVRALVPVLYT 180

Query: 181 VRRIFVIMDWMKDVWLNKTLPANAPINDIAWFWFGRTLAVANFAYFCINLFGFLIPRFIP 240
           VRRIFVIMDWMKDVWLNKTLPANAPINDIAWFWFGRTLAVANFAYFCINLFGFLIPRFIP
Sbjct: 181 VRRIFVIMDWMKDVWLNKTLPANAPINDIAWFWFGRTLAVANFAYFCINLFGFLIPRFIP 240

Query: 241 RAFQRYFKDRDDETHAKIQEDNLSSAPPKSHPSDKKTD 279
           RAF+RYFKDRDDETHAKIQEDNLSSAPPKSHPSDKKTD
Sbjct: 241 RAFERYFKDRDDETHAKIQEDNLSSAPPKSHPSDKKTD 274

[Close]

BLAST of Carg11587 vs. NCBI nr
Match: XP_022991374.1 (uncharacterized protein LOC111488027 [Cucurbita maxima])

HSP 1 Score: 508.8 bits (1309), Expect = 2.9e-140
Identity = 265/279 (94.98%), Postives = 269/279 (96.42%), Query Frame = 0


Query: 1   MSGVTLAVAPRTDPNDAVAPQHKPLRRQQQEQNSVVGGVMGSLRVIELQLVAFIMVFSAS 60
           MSGVTLAVAPRTDPNDAV PQ KPLRRQQQEQN+VVGGVMGSLRVIELQLVAFIMVFSAS
Sbjct: 1   MSGVTLAVAPRTDPNDAVPPQQKPLRRQQQEQNTVVGGVMGSLRVIELQLVAFIMVFSAS 60

Query: 61  GLVPVLDLIFPAFTSAYLLLLARFAFPSHGHASGASQEIFQAMLNGSKLFRMYVVVGTTI 120
           GLVP+LDL FPAFTSAYLLLLARFAFPS GHASGASQEIFQ    GSKLFRMYVVVGTTI
Sbjct: 61  GLVPILDLTFPAFTSAYLLLLARFAFPSRGHASGASQEIFQ----GSKLFRMYVVVGTTI 120

Query: 121 GLFLPLAYVLGGFARSDEHAVRSATPHLFLLSFQILTENVISGLSLFSPPVRALVPVLYT 180
           GLFLPLAYVLGGFARSDEHAVRSATPHLFLLSFQILTENVISGLSLFSPPVRALVPVLYT
Sbjct: 121 GLFLPLAYVLGGFARSDEHAVRSATPHLFLLSFQILTENVISGLSLFSPPVRALVPVLYT 180

Query: 181 VRRIFVIMDWMKDVWLNKTLPANAPINDIAWFWFGRTLAVANFAYFCINLFGFLIPRFIP 240
           VRRIFVIMDWMKDVWLNKTL ANAPINDIAWFWFGRTLAVANFAYFCINLFGFLIPRFIP
Sbjct: 181 VRRIFVIMDWMKDVWLNKTLAANAPINDIAWFWFGRTLAVANFAYFCINLFGFLIPRFIP 240

Query: 241 RAFQRYFKDRD-DETHAKIQEDNLSSAPPKSHPSDKKTD 279
           RAF+RYFKDRD DETHAKI+EDNLSSAPPKSHPSDKKTD
Sbjct: 241 RAFERYFKDRDEDETHAKIREDNLSSAPPKSHPSDKKTD 275

[Close]

BLAST of Carg11587 vs. ExPASy TrEMBL
Match: A0A6J1GS90 (uncharacterized protein LOC111456631 OS=Cucurbita moschata OX=3662 GN=LOC111456631 PE=4 SV=1)

HSP 1 Score: 530.4 bits (1365), Expect = 4.5e-147
Identity = 273/278 (98.20%), Postives = 274/278 (98.56%), Query Frame = 0


Query: 1   MSGVTLAVAPRTDPNDAVAPQHKPLRRQQQEQNSVVGGVMGSLRVIELQLVAFIMVFSAS 60
           MSGVTLAVAPRTDPNDAVAPQHKPLRRQQQEQNSVVGGVMGSLRVIELQLVAFIMVFSAS
Sbjct: 1   MSGVTLAVAPRTDPNDAVAPQHKPLRRQQQEQNSVVGGVMGSLRVIELQLVAFIMVFSAS 60

Query: 61  GLVPVLDLIFPAFTSAYLLLLARFAFPSHGHASGASQEIFQAMLNGSKLFRMYVVVGTTI 120
           GLVP+LDLIFPAFTSAYLLLLARFAFPSHGHASGASQEIFQ    GSKLFRMYVVVGTTI
Sbjct: 61  GLVPILDLIFPAFTSAYLLLLARFAFPSHGHASGASQEIFQ----GSKLFRMYVVVGTTI 120

Query: 121 GLFLPLAYVLGGFARSDEHAVRSATPHLFLLSFQILTENVISGLSLFSPPVRALVPVLYT 180
           GLFLPLAYVLGGFARSDEHAVRSATPHLFLLSFQILTENVISGLSLFSPPVRALVPVLYT
Sbjct: 121 GLFLPLAYVLGGFARSDEHAVRSATPHLFLLSFQILTENVISGLSLFSPPVRALVPVLYT 180

Query: 181 VRRIFVIMDWMKDVWLNKTLPANAPINDIAWFWFGRTLAVANFAYFCINLFGFLIPRFIP 240
           VRRIFVIMDWMKDVWLNKTLPANAPINDIAWFWFGRTLAVANFAYFCINLFGFLIPRFIP
Sbjct: 181 VRRIFVIMDWMKDVWLNKTLPANAPINDIAWFWFGRTLAVANFAYFCINLFGFLIPRFIP 240

Query: 241 RAFQRYFKDRDDETHAKIQEDNLSSAPPKSHPSDKKTD 279
           RAFQRYFKDRDDETHAKIQEDNLSSAPPKSHPSDKKTD
Sbjct: 241 RAFQRYFKDRDDETHAKIQEDNLSSAPPKSHPSDKKTD 274

[Close]

BLAST of Carg11587 vs. ExPASy TrEMBL
Match: A0A6J1JUQ0 (uncharacterized protein LOC111488027 OS=Cucurbita maxima OX=3661 GN=LOC111488027 PE=4 SV=1)

HSP 1 Score: 508.8 bits (1309), Expect = 1.4e-140
Identity = 265/279 (94.98%), Postives = 269/279 (96.42%), Query Frame = 0


Query: 1   MSGVTLAVAPRTDPNDAVAPQHKPLRRQQQEQNSVVGGVMGSLRVIELQLVAFIMVFSAS 60
           MSGVTLAVAPRTDPNDAV PQ KPLRRQQQEQN+VVGGVMGSLRVIELQLVAFIMVFSAS
Sbjct: 1   MSGVTLAVAPRTDPNDAVPPQQKPLRRQQQEQNTVVGGVMGSLRVIELQLVAFIMVFSAS 60

Query: 61  GLVPVLDLIFPAFTSAYLLLLARFAFPSHGHASGASQEIFQAMLNGSKLFRMYVVVGTTI 120
           GLVP+LDL FPAFTSAYLLLLARFAFPS GHASGASQEIFQ    GSKLFRMYVVVGTTI
Sbjct: 61  GLVPILDLTFPAFTSAYLLLLARFAFPSRGHASGASQEIFQ----GSKLFRMYVVVGTTI 120

Query: 121 GLFLPLAYVLGGFARSDEHAVRSATPHLFLLSFQILTENVISGLSLFSPPVRALVPVLYT 180
           GLFLPLAYVLGGFARSDEHAVRSATPHLFLLSFQILTENVISGLSLFSPPVRALVPVLYT
Sbjct: 121 GLFLPLAYVLGGFARSDEHAVRSATPHLFLLSFQILTENVISGLSLFSPPVRALVPVLYT 180

Query: 181 VRRIFVIMDWMKDVWLNKTLPANAPINDIAWFWFGRTLAVANFAYFCINLFGFLIPRFIP 240
           VRRIFVIMDWMKDVWLNKTL ANAPINDIAWFWFGRTLAVANFAYFCINLFGFLIPRFIP
Sbjct: 181 VRRIFVIMDWMKDVWLNKTLAANAPINDIAWFWFGRTLAVANFAYFCINLFGFLIPRFIP 240

Query: 241 RAFQRYFKDRD-DETHAKIQEDNLSSAPPKSHPSDKKTD 279
           RAF+RYFKDRD DETHAKI+EDNLSSAPPKSHPSDKKTD
Sbjct: 241 RAFERYFKDRDEDETHAKIREDNLSSAPPKSHPSDKKTD 275

[Close]

BLAST of Carg11587 vs. ExPASy TrEMBL
Match: A0A0A0KAF1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G094170 PE=4 SV=1)

HSP 1 Score: 449.5 bits (1155), Expect = 1.0e-122
Identity = 240/287 (83.62%), Postives = 253/287 (88.15%), Query Frame = 0


Query: 1   MSGVTLAVAPRTDPNDAVAPQHK-------PLRRQ-QQEQNSVVGGVMGSLRVIELQLVA 60
           MSGVTLA+ P TD NDA  P+ K       PLR+Q QQEQN+VVGGVMGSLRVIELQLVA
Sbjct: 1   MSGVTLAMGPGTDSNDAAMPELKRAQQLKPPLRQQHQQEQNTVVGGVMGSLRVIELQLVA 60

Query: 61  FIMVFSASGLVPVLDLIFPAFTSAYLLLLARFAFPSHGHASGASQEIFQAMLNGSKLFRM 120
           FIMVFSASGLVP LDL+FPAFTSAYLLLLARFAFPSHGH S  S EIFQA    S LFRM
Sbjct: 61  FIMVFSASGLVPFLDLVFPAFTSAYLLLLARFAFPSHGHTSTRSPEIFQA----STLFRM 120

Query: 121 YVVVGTTIGLFLPLAYVLGGFARSDEHAVRSATPHLFLLSFQILTENVISGLSLFSPPVR 180
           YVVVGTTIGLFLPLAYVLGGFAR DEHAVRSATPHLFLLSFQILTENVISGLSLFSPPVR
Sbjct: 121 YVVVGTTIGLFLPLAYVLGGFARGDEHAVRSATPHLFLLSFQILTENVISGLSLFSPPVR 180

Query: 181 ALVPVLYTVRRIFVIMDWMKDVWLNKTLPANAPINDIAWFWFGRTLAVANFAYFCINLFG 240
           ALVP+LYTVRRIFVIMDWMKDVWLNK+LPANAPI DI WFWFGRTLAVANFAYFCINLFG
Sbjct: 181 ALVPLLYTVRRIFVIMDWMKDVWLNKSLPANAPIKDIGWFWFGRTLAVANFAYFCINLFG 240

Query: 241 FLIPRFIPRAFQRYFKDRDDETHAKIQEDNLSS-APPKSHPSDKKTD 279
           FLIPRF+PRAF++YFK+RDDE+HAK  ED LSS A  KS PSDKK+D
Sbjct: 241 FLIPRFLPRAFEKYFKERDDESHAKFHEDKLSSAAAAKSQPSDKKSD 283

[Close]

BLAST of Carg11587 vs. ExPASy TrEMBL
Match: A0A1S3CB68 (uncharacterized protein LOC103498861 OS=Cucumis melo OX=3656 GN=LOC103498861 PE=4 SV=1)

HSP 1 Score: 448.4 bits (1152), Expect = 2.2e-122
Identity = 242/286 (84.62%), Postives = 252/286 (88.11%), Query Frame = 0


Query: 1   MSGVTLAVAPRTDPNDAV----APQHK-PLRRQ-QQEQNSVVGGVMGSLRVIELQLVAFI 60
           MSGV+LAV PRT+ NDA     A Q K PLRRQ QQEQNSVVGGVMGSLRVIELQLVAFI
Sbjct: 1   MSGVSLAVGPRTESNDAAELKRAQQLKPPLRRQHQQEQNSVVGGVMGSLRVIELQLVAFI 60

Query: 61  MVFSASGLVPVLDLIFPAFTSAYLLLLARFAFPSHGHASGASQEIFQAMLNGSKLFRMYV 120
           MVFSASGLVP LDL+FPAFTSAYLLLLARFAFPSHGH S  S EIFQ    GS LFRMYV
Sbjct: 61  MVFSASGLVPFLDLVFPAFTSAYLLLLARFAFPSHGHTSTGSPEIFQ----GSTLFRMYV 120

Query: 121 VVGTTIGLFLPLAYVLGGFARSDEHAVRSATPHLFLLSFQILTENVISGLSLFSPPVRAL 180
           VVGTT+GLFLPLAYVLGGFAR DEHAVRSATPHLFLLSFQILTENVISGLSLFSPPVRAL
Sbjct: 121 VVGTTVGLFLPLAYVLGGFARGDEHAVRSATPHLFLLSFQILTENVISGLSLFSPPVRAL 180

Query: 181 VPVLYTVRRIFVIMDWMKDVWLNKTLPANAPINDIAWFWFGRTLAVANFAYFCINLFGFL 240
           VP+LYTVRRIFVIMDW KDVWLNK LPANAPI DI WFWFGRTLAVANFAYFCINLFGFL
Sbjct: 181 VPLLYTVRRIFVIMDWTKDVWLNKALPANAPIKDIGWFWFGRTLAVANFAYFCINLFGFL 240

Query: 241 IPRFIPRAFQRYFKDRDDETHAKIQEDNLSS--APPKSHPSDKKTD 279
           IPRF+PRAF++YFK+R DETHAK QED LSS  A  KS PSDKK+D
Sbjct: 241 IPRFLPRAFEKYFKERSDETHAKFQEDKLSSATAAAKSQPSDKKSD 282

[Close]

BLAST of Carg11587 vs. ExPASy TrEMBL
Match: A0A5D3DMD1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G002220 PE=4 SV=1)

HSP 1 Score: 445.3 bits (1144), Expect = 1.9e-121
Identity = 241/286 (84.27%), Postives = 251/286 (87.76%), Query Frame = 0


Query: 1   MSGVTLAVAPRTDPNDAV----APQHK-PLRRQ-QQEQNSVVGGVMGSLRVIELQLVAFI 60
           MSGV+LAV PRT+ NDA     A Q K PLRRQ QQEQNSVVGGVMGSLRVIELQLVAFI
Sbjct: 1   MSGVSLAVGPRTESNDAAELKRAQQLKPPLRRQHQQEQNSVVGGVMGSLRVIELQLVAFI 60

Query: 61  MVFSASGLVPVLDLIFPAFTSAYLLLLARFAFPSHGHASGASQEIFQAMLNGSKLFRMYV 120
           MVFSASGLVP LDL+FPAFTSAYLLLLARFAFPSHG  S  S EIFQ    GS LFRMYV
Sbjct: 61  MVFSASGLVPFLDLVFPAFTSAYLLLLARFAFPSHGQTSTGSPEIFQ----GSTLFRMYV 120

Query: 121 VVGTTIGLFLPLAYVLGGFARSDEHAVRSATPHLFLLSFQILTENVISGLSLFSPPVRAL 180
           VVGTT+GLFLPLAYVLGGFAR DEHAVRSATPHLFLLSFQILTENVISGLSLFSPPVRAL
Sbjct: 121 VVGTTVGLFLPLAYVLGGFARGDEHAVRSATPHLFLLSFQILTENVISGLSLFSPPVRAL 180

Query: 181 VPVLYTVRRIFVIMDWMKDVWLNKTLPANAPINDIAWFWFGRTLAVANFAYFCINLFGFL 240
           VP+LYTVRRIFVIMDW KDVWLNK LPANAPI DI WFWFGRTLAVANFAYFCINLFGFL
Sbjct: 181 VPLLYTVRRIFVIMDWTKDVWLNKALPANAPIKDIGWFWFGRTLAVANFAYFCINLFGFL 240

Query: 241 IPRFIPRAFQRYFKDRDDETHAKIQEDNLSS--APPKSHPSDKKTD 279
           IPRF+PRAF++YFK+R DETHAK QED LSS  A  KS PSDKK+D
Sbjct: 241 IPRFLPRAFEKYFKERSDETHAKFQEDKLSSATAAAKSQPSDKKSD 282

[Close]

BLAST of Carg11587 vs. TAIR 10
Match: AT1G27990.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G52420.1); Has 86 Blast hits to 86 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 84; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 338.6 bits (867), Expect = 4.8e-93
Identity = 185/278 (66.55%), Postives = 215/278 (77.34%), Query Frame = 0


Query: 1   MSGVTLAVAPRTDPNDAVAPQHKPLRRQQQEQNSVVGGVMGSLRVIELQLVAFIMVFSAS 60
           MSGV+LAV PRTD +   +   K             GG+MGSLRVIELQLVAFI+VFSAS
Sbjct: 1   MSGVSLAVGPRTDVDKTASSSEKGRWSGMTAIGGGSGGLMGSLRVIELQLVAFILVFSAS 60

Query: 61  GLVPVLDLIFPAFTSAYLLLLARFAFPSHGHASGASQEIFQAMLNGSKLFRMYVVVGTTI 120
           GLVP+LD++FPAF S Y++ L+R AFPSHG  S AS E+F+    GSKLFR+YV+ GTTI
Sbjct: 61  GLVPILDMLFPAFASIYIIALSRLAFPSHG-VSTASPEVFR----GSKLFRLYVISGTTI 120

Query: 121 GLFLPLAYVLGGFARSDEHAVRSATPHLFLLSFQILTENVISGLSLFSPPVRALVPVLYT 180
           GLFLPLAYVLGGFAR D+HAVRSATPHLFLLS QILTENVISGLSLFSPPVRALVP+LYT
Sbjct: 121 GLFLPLAYVLGGFARGDDHAVRSATPHLFLLSCQILTENVISGLSLFSPPVRALVPLLYT 180

Query: 181 VRRIFVIMDWMKDVWLNKTLPANAPINDIAWFWFGRTLAVANFAYFCINLFGFLIPRFIP 240
           V RIFVI+ W KDVW NK+LP NA  N + WFWFGR LA+AN  YF +NL  FLIPRF+P
Sbjct: 181 VWRIFVIIGWSKDVWFNKSLPINATPNVVTWFWFGRYLALANLGYFGVNLLCFLIPRFLP 240

Query: 241 RAFQRYFKDRDDETHAKIQEDNLSSAPPKSHPSDKKTD 279
           RAF++YF++R DE  AK QED      P+S PS+ K+D
Sbjct: 241 RAFEQYFRER-DEILAKSQEDKPVQV-PRSKPSNHKSD 271

[Close]

BLAST of Carg11587 vs. TAIR 10
Match: AT5G52420.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G23920.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 135.6 bits (340), Expect = 6.2e-32
Identity = 82/243 (33.74%), Postives = 128/243 (52.67%), Query Frame = 0


Query: 15  NDAVAPQHKPLRRQQQEQNSV--VGGVMGSLRVIELQLVAFIMVFSASGLVPVLDLIFPA 74
           ND   P+ +    Q Q  ++V   G   G     +L ++A I+V SASGLV + D IF  
Sbjct: 10  NDITLPKEEEEEHQTQSTSTVSSTGKPAGFFSFRQLNILAIIIVLSASGLVTIQDFIFTI 69

Query: 75  FTSAYLLLLARFAFPSHGHASGASQEIFQAMLNGS--KLFRMYVVVGTTIGLFLPLAYVL 134
            T  Y   L++  FP H + +        A L  S  K+FR+YV     +GL +P+ Y+ 
Sbjct: 70  LTLIYFFFLSKLIFPPHNNPNR------DAPLTSSTNKIFRIYVTAAGIVGLIIPICYIF 129

Query: 135 GGFARSDEHAVRSATPHLFLLSFQILTENVISGLSLFSPPVRALVPVLYTVRRIFVIMDW 194
            G    D++ V +A PH+FLL+ QI  E + +    FS P R LVP++Y  RR+  +++W
Sbjct: 130 EGIVEDDKNGVSAAAPHVFLLASQIFMEGLATMFG-FSAPARILVPIVYNARRVLTLVEW 189

Query: 195 MKDVWLNKTLPANAPINDIAWFWFGRTLAVANFAYFCINLFGFLIPRFIPRAFQRYF-KD 253
           +   +  + +        +   + G+ LA AN   +  NLFG LIP ++PRAF+RY+  D
Sbjct: 190 IMSEFSREDVTGTVSARRM---YAGKVLAAANLGIWSFNLFGVLIPVYLPRAFKRYYGSD 242

[Close]

BLAST of Carg11587 vs. TAIR 10
Match: AT5G23920.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G52420.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 105.5 bits (262), Expect = 6.9e-23
Identity = 74/210 (35.24%), Postives = 112/210 (53.33%), Query Frame = 0


Query: 47  ELQLVAFIMVFSASGLVPVLDLIFPAFTSAYLL-LLARFAFPSHGHASGASQEIFQAMLN 106
           +L  ++F+++ +A GLV + ++ F      YL   L+RFAFP        +++  +    
Sbjct: 32  QLVFLSFMILLAAKGLVGIGEIAFVILCYIYLYEFLSRFAFPRK-----QTEQKKRLSNP 91

Query: 107 GSKLFRMYVVVGTTIGLFLPLAYVLGGFARSDEHAVRSATPHLFLLSFQILTENVISGLS 166
            +KLF+ Y +    IGL  PL Y+  G  R D H   +A PHLFLLS Q  TE +  G S
Sbjct: 92  KNKLFQAYFLATAIIGLLFPLCYIGDGIYRGDIHGAGAAAPHLFLLSGQAFTEPI--GFS 151

Query: 167 -LFSPPVRALVPVLYTVRRIFVIMDWMKDVWLNKTLPANAPINDIAWFWFGRTLAVANFA 226
             +S P+  L PV Y  RRIF ++DW+K  + +   P   P+      + GR +A  N  
Sbjct: 152 DKYSMPIGILGPVFYNARRIFALLDWVKAEFSDTQRP-GGPLR----LYGGRVIASVNTV 211

Query: 227 YFCINLFGFLIPRFIPRAFQRYFK--DRDD 253
            +  NLFG L+P F+PR+ + YF   ++DD
Sbjct: 212 MWFYNLFGLLLPVFLPRSCEIYFSGDNKDD 229

The following BLAST results are available for this feature:

BLAST of Carg11587 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7014643.1	8.1e-151	100.00	hypothetical protein SDJN02_24822, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022954375.1	9.3e-147	98.20	uncharacterized protein LOC111456631 [Cucurbita moschata]	[more]
KAG6576125.1	2.1e-146	98.20	hypothetical protein SDJN03_26764, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023550142.1	1.5e-144	97.12	uncharacterized protein LOC111808420 [Cucurbita pepo subsp. pepo]	[more]
XP_022991374.1	2.9e-140	94.98	uncharacterized protein LOC111488027 [Cucurbita maxima]	[more]

BLAST of Carg11587 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg11587 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GS90	4.5e-147	98.20	uncharacterized protein LOC111456631 OS=Cucurbita moschata OX=3662 GN=LOC1114566...	[more]
A0A6J1JUQ0	1.4e-140	94.98	uncharacterized protein LOC111488027 OS=Cucurbita maxima OX=3661 GN=LOC111488027...	[more]
A0A0A0KAF1	1.0e-122	83.62	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G094170 PE=4 SV=1	[more]
A0A1S3CB68	2.2e-122	84.62	uncharacterized protein LOC103498861 OS=Cucumis melo OX=3656 GN=LOC103498861 PE=...	[more]
A0A5D3DMD1	1.9e-121	84.27	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of Carg11587 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G27990.1	4.8e-93	66.55	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G52420.1	6.2e-32	33.74	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G23920.1	6.9e-23	35.24	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..32
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 258..278
None	No IPR available	PANTHER	PTHR33829:SF2	OSJNBA0044M19.10 PROTEIN	coord: 1..277
None	No IPR available	PANTHER	PTHR33829	OSJNBA0044M19.10 PROTEIN	coord: 1..277

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg11587-RA	Carg11587-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane