Carg11585 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg11585
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	transcription factor TCP20-like
Location	Carg_Chr17: 9868075 .. 9868923 (-)
RNA-Seq Expression	Carg11585
Synteny	Carg11585

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAGACCACAACAACAAGAAGCCATCAGCAGCAGCAGCAACAGCAGCAGCAGCGCCACCACCACCATCATCACCCGCTCCAACACCACCATCCTCGGATATCATAATTGCAAACCCAAACAAAGATCAAAACAAGAAGCACCAACAACAATTGGCTCCTAAGCGTACTTCCAATAAAGACCGCCACAAGAAAGTGGATGGCCGTGGCCGTAGGATCCGCATGCCTGCCCTCTGCGCCGCCCGTGTCTTCCAATTGACCCGCGAATTAGGCCATAAGACCGACGGCGAGACCATCCAGTGGCTCCTCCAGCAAGCTGAGCCCTCCATCATCGCCGCCACTGGCTCCGGTACCATCCCTGCATCTGCCCTCCATGCGGCCGGCGTCTCCCTCTCGGACCCCGACACCTCCGTCTCTGTGTCCGCCACCCTGACCCCCAAAATTGACGCCGTCCCAAGACTGAATTGGGCGATGATGGGGGCCAATTTGAACAGATCTCACATGGGTACGCCCGGATTCTGGCCGTCCCTAGGCGGAATCGGGCCGGGGTTCGTCAGCGAGAATCCGGGTTCGATTATGCCCAAATTCGGGTTCCATGGATTCGAATTTCAGGGGATGAATTTGGGATCCGTGAATTTCCCGACGATAATCGGGAATCAGCAGCCGCAGCAGCAAATACCGGGACTGGAGCTAGGGCTTTCGCAGGAGGGGAATAATGTAAGAGGGATGTTGAACCCGCCTTCGTATTCCCAAATCTATCACCAAATAGGGCAGAGTCGGGACCCCTCTGCGGCGCCATTGGAGCAGGACCAAGCTCCAGATAAAGACAAGTCTCAAGAATCGAGATGA

mRNA sequence

ATGGCAGACCACAACAACAAGAAGCCATCAGCAGCAGCAGCAACAGCAGCAGCAGCGCCACCACCACCATCATCACCCGCTCCAACACCACCATCCTCGGATATCATAATTGCAAACCCAAACAAAGATCAAAACAAGAAGCACCAACAACAATTGGCTCCTAAGCGTACTTCCAATAAAGACCGCCACAAGAAAGTGGATGGCCGTGGCCGTAGGATCCGCATGCCTGCCCTCTGCGCCGCCCGTGTCTTCCAATTGACCCGCGAATTAGGCCATAAGACCGACGGCGAGACCATCCAGTGGCTCCTCCAGCAAGCTGAGCCCTCCATCATCGCCGCCACTGGCTCCGGTACCATCCCTGCATCTGCCCTCCATGCGGCCGGCGTCTCCCTCTCGGACCCCGACACCTCCGTCTCTGTGTCCGCCACCCTGACCCCCAAAATTGACGCCGTCCCAAGACTGAATTGGGCGATGATGGGGGCCAATTTGAACAGATCTCACATGGGTACGCCCGGATTCTGGCCGTCCCTAGGCGGAATCGGGCCGGGGTTCGTCAGCGAGAATCCGGGTTCGATTATGCCCAAATTCGGGTTCCATGGATTCGAATTTCAGGGGATGAATTTGGGATCCGTGAATTTCCCGACGATAATCGGGAATCAGCAGCCGCAGCAGCAAATACCGGGACTGGAGCTAGGGCTTTCGCAGGAGGGGAATAATGTAAGAGGGATGTTGAACCCGCCTTCGTATTCCCAAATCTATCACCAAATAGGGCAGAGTCGGGACCCCTCTGCGGCGCCATTGGAGCAGGACCAAGCTCCAGATAAAGACAAGTCTCAAGAATCGAGATGA

Coding sequence (CDS)

ATGGCAGACCACAACAACAAGAAGCCATCAGCAGCAGCAGCAACAGCAGCAGCAGCGCCACCACCACCATCATCACCCGCTCCAACACCACCATCCTCGGATATCATAATTGCAAACCCAAACAAAGATCAAAACAAGAAGCACCAACAACAATTGGCTCCTAAGCGTACTTCCAATAAAGACCGCCACAAGAAAGTGGATGGCCGTGGCCGTAGGATCCGCATGCCTGCCCTCTGCGCCGCCCGTGTCTTCCAATTGACCCGCGAATTAGGCCATAAGACCGACGGCGAGACCATCCAGTGGCTCCTCCAGCAAGCTGAGCCCTCCATCATCGCCGCCACTGGCTCCGGTACCATCCCTGCATCTGCCCTCCATGCGGCCGGCGTCTCCCTCTCGGACCCCGACACCTCCGTCTCTGTGTCCGCCACCCTGACCCCCAAAATTGACGCCGTCCCAAGACTGAATTGGGCGATGATGGGGGCCAATTTGAACAGATCTCACATGGGTACGCCCGGATTCTGGCCGTCCCTAGGCGGAATCGGGCCGGGGTTCGTCAGCGAGAATCCGGGTTCGATTATGCCCAAATTCGGGTTCCATGGATTCGAATTTCAGGGGATGAATTTGGGATCCGTGAATTTCCCGACGATAATCGGGAATCAGCAGCCGCAGCAGCAAATACCGGGACTGGAGCTAGGGCTTTCGCAGGAGGGGAATAATGTAAGAGGGATGTTGAACCCGCCTTCGTATTCCCAAATCTATCACCAAATAGGGCAGAGTCGGGACCCCTCTGCGGCGCCATTGGAGCAGGACCAAGCTCCAGATAAAGACAAGTCTCAAGAATCGAGATGA

Protein sequence

MADHNNKKPSAAAATAAAAPPPPSSPAPTPPSSDIIIANPNKDQNKKHQQQLAPKRTSNKDRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEPSIIAATGSGTIPASALHAAGVSLSDPDTSVSVSATLTPKIDAVPRLNWAMMGANLNRSHMGTPGFWPSLGGIGPGFVSENPGSIMPKFGFHGFEFQGMNLGSVNFPTIIGNQQPQQQIPGLELGLSQEGNNVRGMLNPPSYSQIYHQIGQSRDPSAAPLEQDQAPDKDKSQESR

Homology

[Close]

BLAST of Carg11585 vs. NCBI nr
Match: KAG7014641.1 (Transcription factor TCP20, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 549.7 bits (1415), Expect = 1.5e-152
Identity = 282/282 (100.00%), Postives = 282/282 (100.00%), Query Frame = 0


Query: 1   MADHNNKKPSAAAATAAAAPPPPSSPAPTPPSSDIIIANPNKDQNKKHQQQLAPKRTSNK 60
           MADHNNKKPSAAAATAAAAPPPPSSPAPTPPSSDIIIANPNKDQNKKHQQQLAPKRTSNK
Sbjct: 1   MADHNNKKPSAAAATAAAAPPPPSSPAPTPPSSDIIIANPNKDQNKKHQQQLAPKRTSNK 60

Query: 61  DRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEPSIIAATGSGTIP 120
           DRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEPSIIAATGSGTIP
Sbjct: 61  DRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEPSIIAATGSGTIP 120

Query: 121 ASALHAAGVSLSDPDTSVSVSATLTPKIDAVPRLNWAMMGANLNRSHMGTPGFWPSLGGI 180
           ASALHAAGVSLSDPDTSVSVSATLTPKIDAVPRLNWAMMGANLNRSHMGTPGFWPSLGGI
Sbjct: 121 ASALHAAGVSLSDPDTSVSVSATLTPKIDAVPRLNWAMMGANLNRSHMGTPGFWPSLGGI 180

Query: 181 GPGFVSENPGSIMPKFGFHGFEFQGMNLGSVNFPTIIGNQQPQQQIPGLELGLSQEGNNV 240
           GPGFVSENPGSIMPKFGFHGFEFQGMNLGSVNFPTIIGNQQPQQQIPGLELGLSQEGNNV
Sbjct: 181 GPGFVSENPGSIMPKFGFHGFEFQGMNLGSVNFPTIIGNQQPQQQIPGLELGLSQEGNNV 240

Query: 241 RGMLNPPSYSQIYHQIGQSRDPSAAPLEQDQAPDKDKSQESR 283
           RGMLNPPSYSQIYHQIGQSRDPSAAPLEQDQAPDKDKSQESR
Sbjct: 241 RGMLNPPSYSQIYHQIGQSRDPSAAPLEQDQAPDKDKSQESR 282

[Close]

BLAST of Carg11585 vs. NCBI nr
Match: KAG6576122.1 (Transcription factor TCP20, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 541.2 bits (1393), Expect = 5.3e-150
Identity = 279/282 (98.94%), Postives = 280/282 (99.29%), Query Frame = 0


Query: 1   MADHNNKKPSAAAATAAAAPPPPSSPAPTPPSSDIIIANPNKDQNKKHQQQLAPKRTSNK 60
           MADHNNK+PSAAAAT  AAPPPPSSPAPTPPSSDIIIANPNKDQNKKHQQQLAPKRTSNK
Sbjct: 1   MADHNNKRPSAAAAT--AAPPPPSSPAPTPPSSDIIIANPNKDQNKKHQQQLAPKRTSNK 60

Query: 61  DRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEPSIIAATGSGTIP 120
           DRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEPSIIAATGSGTIP
Sbjct: 61  DRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEPSIIAATGSGTIP 120

Query: 121 ASALHAAGVSLSDPDTSVSVSATLTPKIDAVPRLNWAMMGANLNRSHMGTPGFWPSLGGI 180
           ASALHAAGVSLSDPDTSVSVSATLTPKIDAVPRLNWAMMGANLNRSHMGTPGFWPSLGGI
Sbjct: 121 ASALHAAGVSLSDPDTSVSVSATLTPKIDAVPRLNWAMMGANLNRSHMGTPGFWPSLGGI 180

Query: 181 GPGFVSENPGSIMPKFGFHGFEFQGMNLGSVNFPTIIGNQQPQQQIPGLELGLSQEGNNV 240
           GPGFVSENPGSIMPKFGFHGFEFQGMNLGSVNFPTIIGNQQPQQQIPGLELGLSQEGNNV
Sbjct: 181 GPGFVSENPGSIMPKFGFHGFEFQGMNLGSVNFPTIIGNQQPQQQIPGLELGLSQEGNNV 240

Query: 241 RGMLNPPSYSQIYHQIGQSRDPSAAPLEQDQAPDKDKSQESR 283
           RGMLNPPSYSQIYHQIGQSRDPSAAPLEQDQAPDKDKSQESR
Sbjct: 241 RGMLNPPSYSQIYHQIGQSRDPSAAPLEQDQAPDKDKSQESR 280

[Close]

BLAST of Carg11585 vs. NCBI nr
Match: XP_022954371.1 (transcription factor TCP20-like [Cucurbita moschata])

HSP 1 Score: 533.9 bits (1374), Expect = 8.5e-148
Identity = 275/282 (97.52%), Postives = 276/282 (97.87%), Query Frame = 0


Query: 1   MADHNNKKPSAAAATAAAAPPPPSSPAPTPPSSDIIIANPNKDQNKKHQQQLAPKRTSNK 60
           MA+HNNKKPS     AAAAPPPPSSPAPTPPSSDIIIANPNKDQNKKHQQQLAPKRTSNK
Sbjct: 66  MAEHNNKKPS----PAAAAPPPPSSPAPTPPSSDIIIANPNKDQNKKHQQQLAPKRTSNK 125

Query: 61  DRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEPSIIAATGSGTIP 120
           DRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEPSIIAATGSGTIP
Sbjct: 126 DRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEPSIIAATGSGTIP 185

Query: 121 ASALHAAGVSLSDPDTSVSVSATLTPKIDAVPRLNWAMMGANLNRSHMGTPGFWPSLGGI 180
           ASALHAAGVSLSDPDTSVSVSATLTPKIDAVPRLNWAMMGANLNRSHMGTPGFWPSLGGI
Sbjct: 186 ASALHAAGVSLSDPDTSVSVSATLTPKIDAVPRLNWAMMGANLNRSHMGTPGFWPSLGGI 245

Query: 181 GPGFVSENPGSIMPKFGFHGFEFQGMNLGSVNFPTIIGNQQPQQQIPGLELGLSQEGNNV 240
           GPGFVSENPGSIMPKFGFHGFEFQGMNLGSVNFPTIIGNQQPQQQIPGLELGLSQEGNNV
Sbjct: 246 GPGFVSENPGSIMPKFGFHGFEFQGMNLGSVNFPTIIGNQQPQQQIPGLELGLSQEGNNV 305

Query: 241 RGMLNPPSYSQIYHQIGQSRDPSAAPLEQDQAPDKDKSQESR 283
           RGMLNPPSYSQIYHQIGQSRDPSAAPLEQDQAPDKD SQESR
Sbjct: 306 RGMLNPPSYSQIYHQIGQSRDPSAAPLEQDQAPDKDNSQESR 343

[Close]

BLAST of Carg11585 vs. NCBI nr
Match: XP_023516180.1 (transcription factor TCP20-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 532.3 bits (1370), Expect = 2.5e-147
Identity = 275/282 (97.52%), Postives = 276/282 (97.87%), Query Frame = 0


Query: 1   MADHNNKKPSAAAATAAAAPPPPSSPAPTPPSSDIIIANPNKDQNKKHQQQLAPKRTSNK 60
           MA+HNNKKPSAA   AAAAPPPPSSPAPTPPSSDIIIANPNKDQNKKHQQQLAPKRTSNK
Sbjct: 1   MAEHNNKKPSAA---AAAAPPPPSSPAPTPPSSDIIIANPNKDQNKKHQQQLAPKRTSNK 60

Query: 61  DRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEPSIIAATGSGTIP 120
           DRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEPSIIAATGSGTIP
Sbjct: 61  DRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEPSIIAATGSGTIP 120

Query: 121 ASALHAAGVSLSDPDTSVSVSATLTPKIDAVPRLNWAMMGANLNRSHMGTPGFWPSLGGI 180
           ASALHAAGVSLSDPDTSVS SATLTPKIDAVPRLNWAMMGANLNRSHMGTPGFWPSLGGI
Sbjct: 121 ASALHAAGVSLSDPDTSVSASATLTPKIDAVPRLNWAMMGANLNRSHMGTPGFWPSLGGI 180

Query: 181 GPGFVSENPGSIMPKFGFHGFEFQGMNLGSVNFPTIIGNQQPQQQIPGLELGLSQEGNNV 240
           GPGFVSENPGSIMPKFGFHGFEFQGMNLGSVNFPTIIGNQQPQQQIPGLELGLSQEGNNV
Sbjct: 181 GPGFVSENPGSIMPKFGFHGFEFQGMNLGSVNFPTIIGNQQPQQQIPGLELGLSQEGNNV 240

Query: 241 RGMLNPPSYSQIYHQIGQSRDPSAAPLEQDQAPDKDKSQESR 283
           RGMLNPPSYSQIYHQIGQSRDPSAA LEQDQAPDKD SQESR
Sbjct: 241 RGMLNPPSYSQIYHQIGQSRDPSAAALEQDQAPDKDNSQESR 279

[Close]

BLAST of Carg11585 vs. NCBI nr
Match: XP_022991373.1 (transcription factor TCP20-like [Cucurbita maxima])

HSP 1 Score: 526.6 bits (1355), Expect = 1.4e-145
Identity = 270/282 (95.74%), Postives = 274/282 (97.16%), Query Frame = 0


Query: 1   MADHNNKKPSAAAATAAAAPPPPSSPAPTPPSSDIIIANPNKDQNKKHQQQLAPKRTSNK 60
           MA+HNNKKPS     AAA PPPPSSPAPTPPSSDIIIANPNKDQNKKHQQQLAPKRTSNK
Sbjct: 1   MAEHNNKKPS-----AAAPPPPPSSPAPTPPSSDIIIANPNKDQNKKHQQQLAPKRTSNK 60

Query: 61  DRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEPSIIAATGSGTIP 120
           DRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEPSI+AATGSGTIP
Sbjct: 61  DRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEPSIMAATGSGTIP 120

Query: 121 ASALHAAGVSLSDPDTSVSVSATLTPKIDAVPRLNWAMMGANLNRSHMGTPGFWPSLGGI 180
           ASALHAAGVSLSDPDTSVSVSAT TPKIDAVPRLNWAMMGANLNRSHMGTPGFWPSLGGI
Sbjct: 121 ASALHAAGVSLSDPDTSVSVSATQTPKIDAVPRLNWAMMGANLNRSHMGTPGFWPSLGGI 180

Query: 181 GPGFVSENPGSIMPKFGFHGFEFQGMNLGSVNFPTIIGNQQPQQQIPGLELGLSQEGNNV 240
           GPGFVSENPGSIMPKFGFHGFEFQGMNLGSVNFPT+IGNQQPQQQIPGLELGLSQEGNNV
Sbjct: 181 GPGFVSENPGSIMPKFGFHGFEFQGMNLGSVNFPTLIGNQQPQQQIPGLELGLSQEGNNV 240

Query: 241 RGMLNPPSYSQIYHQIGQSRDPSAAPLEQDQAPDKDKSQESR 283
           RGMLNPPSYSQIYHQ+GQSRDPSAAPLEQDQAPDKD SQESR
Sbjct: 241 RGMLNPPSYSQIYHQMGQSRDPSAAPLEQDQAPDKDNSQESR 277

[Close]

BLAST of Carg11585 vs. ExPASy Swiss-Prot
Match: Q9LSD5 (Transcription factor TCP20 OS=Arabidopsis thaliana OX=3702 GN=TCP20 PE=1 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 1.5e-49
Identity = 142/293 (48.46%), Postives = 186/293 (63.48%), Query Frame = 0


Query: 16  AAAAPPPPSSPAPTPPSSD--IIIANPNKDQNKK--HQQQLAPKRTSNKDRHKKVDGRGR 75
           AA+A     +  PT    D  I+++  +K+ NKK  +Q QL PKR+SNKDRH KV+GRGR
Sbjct: 31  AASAVVSDENRKPTTEIKDFQIVVSASDKEPNKKSQNQNQLGPKRSSNKDRHTKVEGRGR 90

Query: 76  RIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEPSIIAATGSGTIPASALHAAGVSL 135
           RIRMPALCAAR+FQLTRELGHK+DGETIQWLLQQAEPSIIAATGSGTIPASAL A+  + 
Sbjct: 91  RIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAATGSGTIPASAL-ASSAAT 150

Query: 136 SDPDTSVSVSATLTPKID-------AVPRLNWAMMGA-NLNRSHMGTPGFWPSLGGIG-- 195
           S+     S++A L    D       +   LNW + G   ++RS + T G WP++ G G  
Sbjct: 151 SNHHQGGSLTAGLMISHDLDGGSSSSGRPLNWGIGGGEGVSRSSLPT-GLWPNVAGFGSG 210

Query: 196 ---PGFVSENPGSIMPKFGFHGFEFQGMNLGSVNFPTIIGNQQPQQQIPGLELGLSQEGN 255
               G +SE  G    + GF GF+F G  +G ++F +I+G      Q+PGLELGLSQEGN
Sbjct: 211 VPTTGLMSEGAGY---RIGFPGFDFPG--VGHMSFASILGGN--HNQMPGLELGLSQEGN 270

Query: 256 NVRGMLNPPSYSQIYHQIGQSRDPSAAPL----------EQDQAPDKDKSQES 282
              G+LNP S++QIY Q+GQ++  +   +           Q ++ +KD SQ S
Sbjct: 271 --VGVLNPQSFTQIYQQMGQAQAQAQGRVLHHMHHNHEEHQQESGEKDDSQGS 312

[Close]

BLAST of Carg11585 vs. ExPASy Swiss-Prot
Match: Q9C9L2 (Transcription factor TCP15 OS=Arabidopsis thaliana OX=3702 GN=TCP15 PE=1 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 4.5e-27
Identity = 66/110 (60.00%), Postives = 86/110 (78.18%), Query Frame = 0


Query: 32  SSDIIIANPNKDQNKKHQQQLAPKRTSNKDRHKKVDGRGRRIRMPALCAARVFQLTRELG 91
           S+ + I +   + N + ++   PKRTS KDRH KV+GRGRRIRMPA+CAARVFQLTRELG
Sbjct: 26  STSLAIISTTSEPNSEPKKP-PPKRTSTKDRHTKVEGRGRRIRMPAMCAARVFQLTRELG 85

Query: 92  HKTDGETIQWLLQQAEPSIIAATGSGTIPASALHAAGVSLSDPDTSVSVS 142
           HK+DGETI+WLLQQAEP++IAATG+GTIPA+   +  +SL    +S+S +
Sbjct: 86  HKSDGETIEWLLQQAEPAVIAATGTGTIPAN-FTSLNISLRSSRSSLSAA 133

[Close]

BLAST of Carg11585 vs. ExPASy Swiss-Prot
Match: Q9LT89 (Transcription factor TCP19 OS=Arabidopsis thaliana OX=3702 GN=TCP19 PE=1 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 1.1e-25
Identity = 74/167 (44.31%), Postives = 97/167 (58.08%), Query Frame = 0


Query: 53  APKRTSNKDRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEPSIIA 112
           APKR ++KDRH KV+GRGRRIRMPA CAARVFQLTRELGHK+DGETI+WLL++AEP+II 
Sbjct: 51  APKRPTSKDRHTKVEGRGRRIRMPAGCAARVFQLTRELGHKSDGETIRWLLERAEPAIIE 110

Query: 113 ATGSGTIPASALHAAG---VSLSDP---------------------------DTSVSVSA 172
           ATG+GT+PA A+   G   +  S P                           D + S  +
Sbjct: 111 ATGTGTVPAIAVSVNGTLKIPTSSPVLNDGGRDGDGDLIKKRRKRNCTSDFVDVNDSCHS 170

Query: 173 TLTPKIDAVPRLNWAMMGANLNRSHMGTPGFWPSLGGIGPGFVSENP 190
           ++T  +  +   N+ +   N+N    G   FWP   G+G  FV+  P
Sbjct: 171 SVTSGLAPITASNYGVNILNVNT--QGFVPFWPM--GMGTAFVTGGP 213

[Close]

BLAST of Carg11585 vs. ExPASy Swiss-Prot
Match: Q9FTA2 (Transcription factor TCP21 OS=Arabidopsis thaliana OX=3702 GN=TCP21 PE=1 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 1.1e-25
Identity = 61/84 (72.62%), Postives = 70/84 (83.33%), Query Frame = 0


Query: 53  APKRTSNKDRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEPSIIA 112
           A K+  +KDRH KVDGRGRRIRMP +CAARVFQLTRELGHK+DG+TI+WLL+QAEPSIIA
Sbjct: 25  AVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIA 84

Query: 113 ATGSGTIPASALHAAGVSLSDPDT 137
           ATG+GT PAS    A +S S P T
Sbjct: 85  ATGTGTTPAS-FSTASLSTSSPFT 107

[Close]

BLAST of Carg11585 vs. ExPASy Swiss-Prot
Match: Q93Z00 (Transcription factor TCP14 OS=Arabidopsis thaliana OX=3702 GN=TCP14 PE=1 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 1.9e-25
Identity = 87/197 (44.16%), Postives = 115/197 (58.38%), Query Frame = 0


Query: 3   DHNNKKPSAAAATAAAAPPPPSSPAPTPPSSDIIIANPNKDQNKKHQQQLAP-------- 62
           D++ ++PS +++++  +       + + P S    + P   Q +  Q Q           
Sbjct: 51  DNHQQQPSPSSSSSLFSLHQHQQLSQSQPQSQSQKSQPQTTQKELLQTQEESAVVAAKKP 110

Query: 63  --KRTSNKDRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEPSIIA 122
             KR S KDRH KVDGRGRRIRMPALCAARVFQLTRELGHK+DGETI+WLLQQAEPS+IA
Sbjct: 111 PLKRASTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPSVIA 170

Query: 123 ATGSGTIPAS------ALHAAGVSLSDPDTSVSVSATLTPKIDAVPRLNWAMMGANLNRS 182
           ATG+GTIPA+      +L ++G S+S P    S ++T +P     P    AM+     + 
Sbjct: 171 ATGTGTIPANFTSLNISLRSSGSSMSLPSHFRSAASTFSPNNIFSP----AMLQQQQQQQ 230

[Close]

BLAST of Carg11585 vs. ExPASy TrEMBL
Match: A0A6J1GQQ8 (transcription factor TCP20-like OS=Cucurbita moschata OX=3662 GN=LOC111456629 PE=4 SV=1)

HSP 1 Score: 533.9 bits (1374), Expect = 4.1e-148
Identity = 275/282 (97.52%), Postives = 276/282 (97.87%), Query Frame = 0


Query: 1   MADHNNKKPSAAAATAAAAPPPPSSPAPTPPSSDIIIANPNKDQNKKHQQQLAPKRTSNK 60
           MA+HNNKKPS     AAAAPPPPSSPAPTPPSSDIIIANPNKDQNKKHQQQLAPKRTSNK
Sbjct: 66  MAEHNNKKPS----PAAAAPPPPSSPAPTPPSSDIIIANPNKDQNKKHQQQLAPKRTSNK 125

Query: 61  DRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEPSIIAATGSGTIP 120
           DRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEPSIIAATGSGTIP
Sbjct: 126 DRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEPSIIAATGSGTIP 185

Query: 121 ASALHAAGVSLSDPDTSVSVSATLTPKIDAVPRLNWAMMGANLNRSHMGTPGFWPSLGGI 180
           ASALHAAGVSLSDPDTSVSVSATLTPKIDAVPRLNWAMMGANLNRSHMGTPGFWPSLGGI
Sbjct: 186 ASALHAAGVSLSDPDTSVSVSATLTPKIDAVPRLNWAMMGANLNRSHMGTPGFWPSLGGI 245

Query: 181 GPGFVSENPGSIMPKFGFHGFEFQGMNLGSVNFPTIIGNQQPQQQIPGLELGLSQEGNNV 240
           GPGFVSENPGSIMPKFGFHGFEFQGMNLGSVNFPTIIGNQQPQQQIPGLELGLSQEGNNV
Sbjct: 246 GPGFVSENPGSIMPKFGFHGFEFQGMNLGSVNFPTIIGNQQPQQQIPGLELGLSQEGNNV 305

Query: 241 RGMLNPPSYSQIYHQIGQSRDPSAAPLEQDQAPDKDKSQESR 283
           RGMLNPPSYSQIYHQIGQSRDPSAAPLEQDQAPDKD SQESR
Sbjct: 306 RGMLNPPSYSQIYHQIGQSRDPSAAPLEQDQAPDKDNSQESR 343

[Close]

BLAST of Carg11585 vs. ExPASy TrEMBL
Match: A0A6J1JW14 (transcription factor TCP20-like OS=Cucurbita maxima OX=3661 GN=LOC111488026 PE=4 SV=1)

HSP 1 Score: 526.6 bits (1355), Expect = 6.6e-146
Identity = 270/282 (95.74%), Postives = 274/282 (97.16%), Query Frame = 0


Query: 1   MADHNNKKPSAAAATAAAAPPPPSSPAPTPPSSDIIIANPNKDQNKKHQQQLAPKRTSNK 60
           MA+HNNKKPS     AAA PPPPSSPAPTPPSSDIIIANPNKDQNKKHQQQLAPKRTSNK
Sbjct: 1   MAEHNNKKPS-----AAAPPPPPSSPAPTPPSSDIIIANPNKDQNKKHQQQLAPKRTSNK 60

Query: 61  DRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEPSIIAATGSGTIP 120
           DRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEPSI+AATGSGTIP
Sbjct: 61  DRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEPSIMAATGSGTIP 120

Query: 121 ASALHAAGVSLSDPDTSVSVSATLTPKIDAVPRLNWAMMGANLNRSHMGTPGFWPSLGGI 180
           ASALHAAGVSLSDPDTSVSVSAT TPKIDAVPRLNWAMMGANLNRSHMGTPGFWPSLGGI
Sbjct: 121 ASALHAAGVSLSDPDTSVSVSATQTPKIDAVPRLNWAMMGANLNRSHMGTPGFWPSLGGI 180

Query: 181 GPGFVSENPGSIMPKFGFHGFEFQGMNLGSVNFPTIIGNQQPQQQIPGLELGLSQEGNNV 240
           GPGFVSENPGSIMPKFGFHGFEFQGMNLGSVNFPT+IGNQQPQQQIPGLELGLSQEGNNV
Sbjct: 181 GPGFVSENPGSIMPKFGFHGFEFQGMNLGSVNFPTLIGNQQPQQQIPGLELGLSQEGNNV 240

Query: 241 RGMLNPPSYSQIYHQIGQSRDPSAAPLEQDQAPDKDKSQESR 283
           RGMLNPPSYSQIYHQ+GQSRDPSAAPLEQDQAPDKD SQESR
Sbjct: 241 RGMLNPPSYSQIYHQMGQSRDPSAAPLEQDQAPDKDNSQESR 277

[Close]

BLAST of Carg11585 vs. ExPASy TrEMBL
Match: A0A1S3CAQ4 (transcription factor TCP20-like OS=Cucumis melo OX=3656 GN=LOC103498864 PE=4 SV=1)

HSP 1 Score: 419.1 bits (1076), Expect = 1.5e-113
Identity = 226/288 (78.47%), Postives = 246/288 (85.42%), Query Frame = 0


Query: 3   DHNNKKPSAAAATAAAAPPPPSSPAPTPPS--SDIIIANPNKDQN------KKHQQQLAP 62
           ++NNK      + A ++ P  + P PTP S   D  +   NKDQN        + +QLAP
Sbjct: 9   NNNNKHHPLLPSPATSSSPLTTPPLPTPSSDIKDFTLIISNKDQNNSNSNSNNNNKQLAP 68

Query: 63  KRTSNKDRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEPSIIAAT 122
           KRTSNKDRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEPSIIAAT
Sbjct: 69  KRTSNKDRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEPSIIAAT 128

Query: 123 GSGTIPASALHAAGVSLSDPDTSVSVSATLTPKIDAVPRLNWAMMGANLNRSHMGTPGFW 182
           GSGTIPASALHAAGVSLSD D+SVSVSA+LTPKI+AVPR NWAMMGANL+RSHM TPGFW
Sbjct: 129 GSGTIPASALHAAGVSLSDHDSSVSVSASLTPKIEAVPRTNWAMMGANLSRSHMATPGFW 188

Query: 183 PSLGGIGPGFVSENPGSIMPKFGFHGFEFQGMNLGSVNFPTIIGNQQPQQQIPGLELGLS 242
           PSLGGIG GFVSENPGSIMPKFGFHGFEFQGMNLGSVNFP +IGNQ   QQIPGLELGLS
Sbjct: 189 PSLGGIGTGFVSENPGSIMPKFGFHGFEFQGMNLGSVNFPGMIGNQ--HQQIPGLELGLS 248

Query: 243 QEGNNVRGMLNPPSYSQIYHQIGQSRDPSAAPLEQDQAPDKDKSQESR 283
           Q+GNN+RGMLNPPS+SQIYHQIGQ+R+ SA PLEQDQAP+KD SQESR
Sbjct: 249 QDGNNLRGMLNPPSFSQIYHQIGQNRESSAPPLEQDQAPEKDDSQESR 294

[Close]

BLAST of Carg11585 vs. ExPASy TrEMBL
Match: A0A5A7T992 (Transcription factor TCP20-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G002190 PE=4 SV=1)

HSP 1 Score: 419.1 bits (1076), Expect = 1.5e-113
Identity = 226/288 (78.47%), Postives = 246/288 (85.42%), Query Frame = 0


Query: 3   DHNNKKPSAAAATAAAAPPPPSSPAPTPPS--SDIIIANPNKDQN------KKHQQQLAP 62
           ++NNK      + A ++ P  + P PTP S   D  +   NKDQN        + +QLAP
Sbjct: 9   NNNNKHHPLLPSPATSSSPLTTPPLPTPSSDIKDFTLIISNKDQNNSNSNSNNNNKQLAP 68

Query: 63  KRTSNKDRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEPSIIAAT 122
           KRTSNKDRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEPSIIAAT
Sbjct: 69  KRTSNKDRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEPSIIAAT 128

Query: 123 GSGTIPASALHAAGVSLSDPDTSVSVSATLTPKIDAVPRLNWAMMGANLNRSHMGTPGFW 182
           GSGTIPASALHAAGVSLSD D+SVSVSA+LTPKI+AVPR NWAMMGANL+RSHM TPGFW
Sbjct: 129 GSGTIPASALHAAGVSLSDHDSSVSVSASLTPKIEAVPRTNWAMMGANLSRSHMATPGFW 188

Query: 183 PSLGGIGPGFVSENPGSIMPKFGFHGFEFQGMNLGSVNFPTIIGNQQPQQQIPGLELGLS 242
           PSLGGIG GFVSENPGSIMPKFGFHGFEFQGMNLGSVNFP +IGNQ   QQIPGLELGLS
Sbjct: 189 PSLGGIGTGFVSENPGSIMPKFGFHGFEFQGMNLGSVNFPGMIGNQ--HQQIPGLELGLS 248

Query: 243 QEGNNVRGMLNPPSYSQIYHQIGQSRDPSAAPLEQDQAPDKDKSQESR 283
           Q+GNN+RGMLNPPS+SQIYHQIGQ+R+ SA PLEQDQAP+KD SQESR
Sbjct: 249 QDGNNLRGMLNPPSFSQIYHQIGQNRESSAPPLEQDQAPEKDDSQESR 294

[Close]

BLAST of Carg11585 vs. ExPASy TrEMBL
Match: A0A6J1H7H8 (transcription factor TCP20-like OS=Cucurbita moschata OX=3662 GN=LOC111460886 PE=4 SV=1)

HSP 1 Score: 412.5 bits (1059), Expect = 1.4e-111
Identity = 226/286 (79.02%), Postives = 242/286 (84.62%), Query Frame = 0


Query: 1   MADHNNKKPSAAAATAAAAPPPPSSPAPTPPSSDIIIAN---PNKDQNKKHQQQLAPKRT 60
           MA+HN KKPS  A+T     PPP      PPS+DI   N    +KD+N KH QQLAPKRT
Sbjct: 1   MAEHNKKKPSPPASTPTTITPPP------PPSADIKDFNIIIASKDEN-KHHQQLAPKRT 60

Query: 61  SNKDRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEPSIIAATGSG 120
           SNKDRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEPSIIAATGSG
Sbjct: 61  SNKDRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEPSIIAATGSG 120

Query: 121 TIPASALHAAGVSLSDPDTSVSVSATLTPKIDAVPRLNWAMMGANLNRSHMGTPGFWPSL 180
           TIPASALHAAGVS+SD +T  S+SA LTPK+D V R NWAMMGANLNRSHM T GFWPSL
Sbjct: 121 TIPASALHAAGVSVSDQET--SISAALTPKLDGVARPNWAMMGANLNRSHMATAGFWPSL 180

Query: 181 GGIGPGFVSENPGSIMPKFGFHGFEFQGMNLGSVNFPTIIGNQQPQQQIPGLELGLSQEG 240
           GGIG GFVSEN GSIMPKFGFHGFEFQGMNLGS+NFPTIIGNQ  QQ +PGLELGLSQEG
Sbjct: 181 GGIGTGFVSENSGSIMPKFGFHGFEFQGMNLGSMNFPTIIGNQH-QQHVPGLELGLSQEG 240

Query: 241 NNVRGMLNPPSYSQIYHQIGQSRDPS-AAPLEQDQAPDKDKSQESR 283
           NN+RGMLNPPSYSQIYHQI Q+RD S    LEQDQAP+KD S++SR
Sbjct: 241 NNLRGMLNPPSYSQIYHQIEQNRDSSGGGSLEQDQAPEKDDSEQSR 276

[Close]

BLAST of Carg11585 vs. TAIR 10
Match: AT3G27010.1 (TEOSINTE BRANCHED 1, cycloidea, PCF (TCP)-domain family protein 20 )

HSP 1 Score: 198.0 bits (502), Expect = 1.0e-50
Identity = 142/293 (48.46%), Postives = 186/293 (63.48%), Query Frame = 0


Query: 16  AAAAPPPPSSPAPTPPSSD--IIIANPNKDQNKK--HQQQLAPKRTSNKDRHKKVDGRGR 75
           AA+A     +  PT    D  I+++  +K+ NKK  +Q QL PKR+SNKDRH KV+GRGR
Sbjct: 31  AASAVVSDENRKPTTEIKDFQIVVSASDKEPNKKSQNQNQLGPKRSSNKDRHTKVEGRGR 90

Query: 76  RIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEPSIIAATGSGTIPASALHAAGVSL 135
           RIRMPALCAAR+FQLTRELGHK+DGETIQWLLQQAEPSIIAATGSGTIPASAL A+  + 
Sbjct: 91  RIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAATGSGTIPASAL-ASSAAT 150

Query: 136 SDPDTSVSVSATLTPKID-------AVPRLNWAMMGA-NLNRSHMGTPGFWPSLGGIG-- 195
           S+     S++A L    D       +   LNW + G   ++RS + T G WP++ G G  
Sbjct: 151 SNHHQGGSLTAGLMISHDLDGGSSSSGRPLNWGIGGGEGVSRSSLPT-GLWPNVAGFGSG 210

Query: 196 ---PGFVSENPGSIMPKFGFHGFEFQGMNLGSVNFPTIIGNQQPQQQIPGLELGLSQEGN 255
               G +SE  G    + GF GF+F G  +G ++F +I+G      Q+PGLELGLSQEGN
Sbjct: 211 VPTTGLMSEGAGY---RIGFPGFDFPG--VGHMSFASILGGN--HNQMPGLELGLSQEGN 270

Query: 256 NVRGMLNPPSYSQIYHQIGQSRDPSAAPL----------EQDQAPDKDKSQES 282
              G+LNP S++QIY Q+GQ++  +   +           Q ++ +KD SQ S
Sbjct: 271 --VGVLNPQSFTQIYQQMGQAQAQAQGRVLHHMHHNHEEHQQESGEKDDSQGS 312

[Close]

BLAST of Carg11585 vs. TAIR 10
Match: AT1G69690.1 (TCP family transcription factor )

HSP 1 Score: 123.2 bits (308), Expect = 3.2e-28
Identity = 66/110 (60.00%), Postives = 86/110 (78.18%), Query Frame = 0


Query: 32  SSDIIIANPNKDQNKKHQQQLAPKRTSNKDRHKKVDGRGRRIRMPALCAARVFQLTRELG 91
           S+ + I +   + N + ++   PKRTS KDRH KV+GRGRRIRMPA+CAARVFQLTRELG
Sbjct: 26  STSLAIISTTSEPNSEPKKP-PPKRTSTKDRHTKVEGRGRRIRMPAMCAARVFQLTRELG 85

Query: 92  HKTDGETIQWLLQQAEPSIIAATGSGTIPASALHAAGVSLSDPDTSVSVS 142
           HK+DGETI+WLLQQAEP++IAATG+GTIPA+   +  +SL    +S+S +
Sbjct: 86  HKSDGETIEWLLQQAEPAVIAATGTGTIPAN-FTSLNISLRSSRSSLSAA 133

[Close]

BLAST of Carg11585 vs. TAIR 10
Match: AT5G08330.1 (TCP family transcription factor )

HSP 1 Score: 118.6 bits (296), Expect = 8.0e-27
Identity = 61/84 (72.62%), Postives = 70/84 (83.33%), Query Frame = 0


Query: 53  APKRTSNKDRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEPSIIA 112
           A K+  +KDRH KVDGRGRRIRMP +CAARVFQLTRELGHK+DG+TI+WLL+QAEPSIIA
Sbjct: 25  AVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIA 84

Query: 113 ATGSGTIPASALHAAGVSLSDPDT 137
           ATG+GT PAS    A +S S P T
Sbjct: 85  ATGTGTTPAS-FSTASLSTSSPFT 107

[Close]

BLAST of Carg11585 vs. TAIR 10
Match: AT5G51910.1 (TCP family transcription factor )

HSP 1 Score: 118.6 bits (296), Expect = 8.0e-27
Identity = 74/167 (44.31%), Postives = 97/167 (58.08%), Query Frame = 0


Query: 53  APKRTSNKDRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEPSIIA 112
           APKR ++KDRH KV+GRGRRIRMPA CAARVFQLTRELGHK+DGETI+WLL++AEP+II 
Sbjct: 51  APKRPTSKDRHTKVEGRGRRIRMPAGCAARVFQLTRELGHKSDGETIRWLLERAEPAIIE 110

Query: 113 ATGSGTIPASALHAAG---VSLSDP---------------------------DTSVSVSA 172
           ATG+GT+PA A+   G   +  S P                           D + S  +
Sbjct: 111 ATGTGTVPAIAVSVNGTLKIPTSSPVLNDGGRDGDGDLIKKRRKRNCTSDFVDVNDSCHS 170

Query: 173 TLTPKIDAVPRLNWAMMGANLNRSHMGTPGFWPSLGGIGPGFVSENP 190
           ++T  +  +   N+ +   N+N    G   FWP   G+G  FV+  P
Sbjct: 171 SVTSGLAPITASNYGVNILNVNT--QGFVPFWPM--GMGTAFVTGGP 213

[Close]

BLAST of Carg11585 vs. TAIR 10
Match: AT5G51910.2 (TCP family transcription factor )

HSP 1 Score: 118.6 bits (296), Expect = 8.0e-27
Identity = 74/167 (44.31%), Postives = 97/167 (58.08%), Query Frame = 0


Query: 53  APKRTSNKDRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEPSIIA 112
           APKR ++KDRH KV+GRGRRIRMPA CAARVFQLTRELGHK+DGETI+WLL++AEP+II 
Sbjct: 51  APKRPTSKDRHTKVEGRGRRIRMPAGCAARVFQLTRELGHKSDGETIRWLLERAEPAIIE 110

Query: 113 ATGSGTIPASALHAAG---VSLSDP---------------------------DTSVSVSA 172
           ATG+GT+PA A+   G   +  S P                           D + S  +
Sbjct: 111 ATGTGTVPAIAVSVNGTLKIPTSSPVLNDGGRDGDGDLIKKRRKRNCTSDFVDVNDSCHS 170

Query: 173 TLTPKIDAVPRLNWAMMGANLNRSHMGTPGFWPSLGGIGPGFVSENP 190
           ++T  +  +   N+ +   N+N    G   FWP   G+G  FV+  P
Sbjct: 171 SVTSGLAPITASNYGVNILNVNT--QGFVPFWPM--GMGTAFVTGGP 213

The following BLAST results are available for this feature:

BLAST of Carg11585 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7014641.1	1.5e-152	100.00	Transcription factor TCP20, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6576122.1	5.3e-150	98.94	Transcription factor TCP20, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022954371.1	8.5e-148	97.52	transcription factor TCP20-like [Cucurbita moschata]	[more]
XP_023516180.1	2.5e-147	97.52	transcription factor TCP20-like [Cucurbita pepo subsp. pepo]	[more]
XP_022991373.1	1.4e-145	95.74	transcription factor TCP20-like [Cucurbita maxima]	[more]

BLAST of Carg11585 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LSD5	1.5e-49	48.46	Transcription factor TCP20 OS=Arabidopsis thaliana OX=3702 GN=TCP20 PE=1 SV=1	[more]
Q9C9L2	4.5e-27	60.00	Transcription factor TCP15 OS=Arabidopsis thaliana OX=3702 GN=TCP15 PE=1 SV=1	[more]
Q9LT89	1.1e-25	44.31	Transcription factor TCP19 OS=Arabidopsis thaliana OX=3702 GN=TCP19 PE=1 SV=1	[more]
Q9FTA2	1.1e-25	72.62	Transcription factor TCP21 OS=Arabidopsis thaliana OX=3702 GN=TCP21 PE=1 SV=1	[more]
Q93Z00	1.9e-25	44.16	Transcription factor TCP14 OS=Arabidopsis thaliana OX=3702 GN=TCP14 PE=1 SV=1	[more]

BLAST of Carg11585 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GQQ8	4.1e-148	97.52	transcription factor TCP20-like OS=Cucurbita moschata OX=3662 GN=LOC111456629 PE...	[more]
A0A6J1JW14	6.6e-146	95.74	transcription factor TCP20-like OS=Cucurbita maxima OX=3661 GN=LOC111488026 PE=4...	[more]
A0A1S3CAQ4	1.5e-113	78.47	transcription factor TCP20-like OS=Cucumis melo OX=3656 GN=LOC103498864 PE=4 SV=...	[more]
A0A5A7T992	1.5e-113	78.47	Transcription factor TCP20-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A6J1H7H8	1.4e-111	79.02	transcription factor TCP20-like OS=Cucurbita moschata OX=3662 GN=LOC111460886 PE...	[more]

BLAST of Carg11585 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G27010.1	1.0e-50	48.46	TEOSINTE BRANCHED 1, cycloidea, PCF (TCP)-domain family protein 20	[more]
AT1G69690.1	3.2e-28	60.00	TCP family transcription factor	[more]
AT5G08330.1	8.0e-27	72.62	TCP family transcription factor	[more]
AT5G51910.1	8.0e-27	44.31	TCP family transcription factor	[more]
AT5G51910.2	8.0e-27	44.31	TCP family transcription factor	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR017887	Transcription factor TCP subgroup	PFAM	PF03634	TCP	coord: 57..139 e-value: 4.4E-30 score: 105.3
IPR017887	Transcription factor TCP subgroup	PROSITE	PS51369	TCP	coord: 59..113 score: 27.380758
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..72
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 48..64
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 254..282
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 31..47
None	No IPR available	PANTHER	PTHR31072:SF121	TRANSCRIPTION FACTOR TCP20-LIKE	coord: 35..282
IPR005333	Transcription factor, TCP	PANTHER	PTHR31072	TRANSCRIPTION FACTOR TCP4-RELATED	coord: 35..282

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg11585-RA	Carg11585-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0043565	sequence-specific DNA binding