Carg11570 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg11570
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	small acidic protein-like isoform X2
Location	Carg_Chr17: 9785221 .. 9786862 (-)
RNA-Seq Expression	Carg11570
Synteny	Carg11570

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCCATCTCATCTCTTCTTCTTTTTCTTCTTCTTCTTCTTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCAGATGAAATCTCCCGATATGGCGGCGGTTACTGATTCCCTCGAGCAGTCTTTCCGTACCTTCTCCCTCAACCACCGTCTGGTCTCAGCTGCCCCCTCGGCCGGTGTTCGTAGGTCGTCGTCTTCTTCTTCTTCCGCCGACGAACGTCATCTTCCTCTTAATCAACATCATCGCTTCGACACAACCTTGGAGCTCAACTCTCACATCTCTCTCCCTCCTTTCTGGGAACAATGCCTCGATTTGAAGGTCAGGGTCACCACTACCGCCTTTCGTTTTCTGTGTTTTGCGTCTTAATTTTCATTGATTCAACTCTCACTTCTCTCGCTTTGTTTCTCTTTGTCTTTTTCTCTCTTGTTCCAGCTTCTGATTCTTTCGTTTTTTTTTTTTTTTTCCCCCTCTTCTTAGCCTGCCTTCATTTATTGCGAAAGGGCGCATATGGCAGATCTTTGGAAATTCTGTTGTCTTGTACTTTTGTTTAATTTTCTGATGATTGTGTGTTCGAGAGGGAGCTTTCGCTTCGATCTTTAATTAATGCGTTTCTGAATCCATAAATTTGTCTTTATGATTAATGCCTCGCTTTCTAAATTCTCTCTCCCTCCCATACGGACTCCATCCGCCCTTCCCAGGATTCGGATTCCAAACCCTAGAATTAATTAATTTCATACTTCCTTTTATCGTCCGCCATTTTCAGTTTTCTTTTCGTACGACCTCAGAAAAAGCTTTCTGGATTTCGGATTCCCTTGCCTTTCTTTCTTTCTTTCTTTCTTTTGTTTCTTTTGTTTCATTTTCTCCTCGGGAACACTAAATTAACTTTTCCATTCTATTCCGTTTGACTCTCTAGACTGGGGAAGTCTACTATAGAAATTGCCGGACCGGAATGAGAGTAACGGAAGATCCGAGGACAGCGGAAGCACACAGCCGAGATTTATACTCGGAAGATGACGACGACAACGATGCGGATGAGAGCTCGTCGGACGACGGCAGCGAGGAGTCGTGTTCTTCGTCGTCGTACGGTGCTAGTAGACAGCAATACCCGCCGGGAAAGGAGGAGGACGTGCTAGTGGTTGCCGGATGCAAGAGATGCTTCATGTACTTCATGGTGCCGAAACAGGTGGAAGATTGCCCCAAATGCAGCAGCAGTCGTCTTGTTCATTTCGATCGCTCCGAGGACAGTAATGGCTTCCCATAAAAGAACGAACCACAATTTTTTAAAAATCAAACTGTGTTTGGGTTAATTCTGACATAATCATTGATTCTTTCTCTTTGGATTAATTTGGTGAGCAAAGGCAAATGGGGTTTAATTTCGTAGCTCGATGTATACGCCTCTCTCCCTCCCTTTGACGTTGTTTTATGAGTTTTAATTGTATGGATATATATTTTACAAAGCTTGAATTGAGAAGCTAAAGAAAAAGAAAAGGAATCTGGGGGGGGGCCGCCATGGATGTGTGAGTGGGAGATGCAGAAAATATGCAGGCATGAATGGGATGATGGTCAACGACTCAAACGAAGAAGGAATAACATTTTGCTCGTGAAGACAGCGACTCATTGCTTTCATTATTCCACAACCCTCTCTG

mRNA sequence

TTCCATCTCATCTCTTCTTCTTTTTCTTCTTCTTCTTCTTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCAGATGAAATCTCCCGATATGGCGGCGGTTACTGATTCCCTCGAGCAGTCTTTCCGTACCTTCTCCCTCAACCACCGTCTGGTCTCAGCTGCCCCCTCGGCCGGTGTTCGTAGGTCGTCGTCTTCTTCTTCTTCCGCCGACGAACGTCATCTTCCTCTTAATCAACATCATCGCTTCGACACAACCTTGGAGCTCAACTCTCACATCTCTCTCCCTCCTTTCTGGGAACAATGCCTCGATTTGAAGACTGGGGAAGTCTACTATAGAAATTGCCGGACCGGAATGAGAGTAACGGAAGATCCGAGGACAGCGGAAGCACACAGCCGAGATTTATACTCGGAAGATGACGACGACAACGATGCGGATGAGAGCTCGTCGGACGACGGCAGCGAGGAGTCGTGTTCTTCGTCGTCGTACGGTGCTAGTAGACAGCAATACCCGCCGGGAAAGGAGGAGGACGTGCTAGTGGTTGCCGGATGCAAGAGATGCTTCATGTACTTCATGGTGCCGAAACAGGTGGAAGATTGCCCCAAATGCAGCAGCAGTCGTCTTGTTCATTTCGATCGCTCCGAGGACAGTAATGGCTTCCCATAAAAGAACGAACCACAATTTTTTAAAAATCAAACTGTGTTTGGGTTAATTCTGACATAATCATTGATTCTTTCTCTTTGGATTAATTTGGTGAGCAAAGGCAAATGGGGTTTAATTTCGTAGCTCGATGTATACGCCTCTCTCCCTCCCTTTGACGTTGTTTTATGAGTTTTAATTGTATGGATATATATTTTACAAAGCTTGAATTGAGAAGCTAAAGAAAAAGAAAAGGAATCTGGGGGGGGGCCGCCATGGATGTGTGAGTGGGAGATGCAGAAAATATGCAGGCATGAATGGGATGATGGTCAACGACTCAAACGAAGAAGGAATAACATTTTGCTCGTGAAGACAGCGACTCATTGCTTTCATTATTCCACAACCCTCTCTG

Coding sequence (CDS)

ATGAAATCTCCCGATATGGCGGCGGTTACTGATTCCCTCGAGCAGTCTTTCCGTACCTTCTCCCTCAACCACCGTCTGGTCTCAGCTGCCCCCTCGGCCGGTGTTCGTAGGTCGTCGTCTTCTTCTTCTTCCGCCGACGAACGTCATCTTCCTCTTAATCAACATCATCGCTTCGACACAACCTTGGAGCTCAACTCTCACATCTCTCTCCCTCCTTTCTGGGAACAATGCCTCGATTTGAAGACTGGGGAAGTCTACTATAGAAATTGCCGGACCGGAATGAGAGTAACGGAAGATCCGAGGACAGCGGAAGCACACAGCCGAGATTTATACTCGGAAGATGACGACGACAACGATGCGGATGAGAGCTCGTCGGACGACGGCAGCGAGGAGTCGTGTTCTTCGTCGTCGTACGGTGCTAGTAGACAGCAATACCCGCCGGGAAAGGAGGAGGACGTGCTAGTGGTTGCCGGATGCAAGAGATGCTTCATGTACTTCATGGTGCCGAAACAGGTGGAAGATTGCCCCAAATGCAGCAGCAGTCGTCTTGTTCATTTCGATCGCTCCGAGGACAGTAATGGCTTCCCATAA

Protein sequence

MKSPDMAAVTDSLEQSFRTFSLNHRLVSAAPSAGVRRSSSSSSSADERHLPLNQHHRFDTTLELNSHISLPPFWEQCLDLKTGEVYYRNCRTGMRVTEDPRTAEAHSRDLYSEDDDDNDADESSSDDGSEESCSSSSYGASRQQYPPGKEEDVLVVAGCKRCFMYFMVPKQVEDCPKCSSSRLVHFDRSEDSNGFP

Homology

[Close]

BLAST of Carg11570 vs. NCBI nr
Match: KAG6576106.1 (hypothetical protein SDJN03_26745, partial [Cucurbita argyrosperma subsp. sororia] >KAG7014626.1 hypothetical protein SDJN02_24805 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 391.0 bits (1003), Expect = 6.2e-105
Identity = 196/196 (100.00%), Postives = 196/196 (100.00%), Query Frame = 0


Query: 1   MKSPDMAAVTDSLEQSFRTFSLNHRLVSAAPSAGVRRSSSSSSSADERHLPLNQHHRFDT 60
           MKSPDMAAVTDSLEQSFRTFSLNHRLVSAAPSAGVRRSSSSSSSADERHLPLNQHHRFDT
Sbjct: 1   MKSPDMAAVTDSLEQSFRTFSLNHRLVSAAPSAGVRRSSSSSSSADERHLPLNQHHRFDT 60

Query: 61  TLELNSHISLPPFWEQCLDLKTGEVYYRNCRTGMRVTEDPRTAEAHSRDLYSEDDDDNDA 120
           TLELNSHISLPPFWEQCLDLKTGEVYYRNCRTGMRVTEDPRTAEAHSRDLYSEDDDDNDA
Sbjct: 61  TLELNSHISLPPFWEQCLDLKTGEVYYRNCRTGMRVTEDPRTAEAHSRDLYSEDDDDNDA 120

Query: 121 DESSSDDGSEESCSSSSYGASRQQYPPGKEEDVLVVAGCKRCFMYFMVPKQVEDCPKCSS 180
           DESSSDDGSEESCSSSSYGASRQQYPPGKEEDVLVVAGCKRCFMYFMVPKQVEDCPKCSS
Sbjct: 121 DESSSDDGSEESCSSSSYGASRQQYPPGKEEDVLVVAGCKRCFMYFMVPKQVEDCPKCSS 180

Query: 181 SRLVHFDRSEDSNGFP 197
           SRLVHFDRSEDSNGFP
Sbjct: 181 SRLVHFDRSEDSNGFP 196

[Close]

BLAST of Carg11570 vs. NCBI nr
Match: XP_022953156.1 (uncharacterized protein LOC111455780 [Cucurbita moschata])

HSP 1 Score: 388.3 bits (996), Expect = 4.0e-104
Identity = 194/196 (98.98%), Postives = 196/196 (100.00%), Query Frame = 0


Query: 1   MKSPDMAAVTDSLEQSFRTFSLNHRLVSAAPSAGVRRSSSSSSSADERHLPLNQHHRFDT 60
           MKSPDMAAVTDSLEQSFRTFSLNHRL+SAAPSAGVRRSSSSSSSADERHLPLNQHHRFDT
Sbjct: 1   MKSPDMAAVTDSLEQSFRTFSLNHRLLSAAPSAGVRRSSSSSSSADERHLPLNQHHRFDT 60

Query: 61  TLELNSHISLPPFWEQCLDLKTGEVYYRNCRTGMRVTEDPRTAEAHSRDLYSEDDDDNDA 120
           TLELNSHISLPPFWEQCLDLKTGEVYYRNCRTGMRVTEDPRTAEAHSRDLYSEDDD+NDA
Sbjct: 61  TLELNSHISLPPFWEQCLDLKTGEVYYRNCRTGMRVTEDPRTAEAHSRDLYSEDDDENDA 120

Query: 121 DESSSDDGSEESCSSSSYGASRQQYPPGKEEDVLVVAGCKRCFMYFMVPKQVEDCPKCSS 180
           DESSSDDGSEESCSSSSYGASRQQYPPGKEEDVLVVAGCKRCFMYFMVPKQVEDCPKCSS
Sbjct: 121 DESSSDDGSEESCSSSSYGASRQQYPPGKEEDVLVVAGCKRCFMYFMVPKQVEDCPKCSS 180

Query: 181 SRLVHFDRSEDSNGFP 197
           SRLVHFDRSEDSNGFP
Sbjct: 181 SRLVHFDRSEDSNGFP 196

[Close]

BLAST of Carg11570 vs. NCBI nr
Match: XP_022991817.1 (uncharacterized protein LOC111488350 [Cucurbita maxima])

HSP 1 Score: 376.7 bits (966), Expect = 1.2e-100
Identity = 191/197 (96.95%), Postives = 192/197 (97.46%), Query Frame = 0


Query: 1   MKSPDMAAVTDSLEQSFRTFSLNHRLVSAAPSAGVRRSSSSSSSADERHLPL-NQHHRFD 60
           MKSPDMAAVTDSLEQSFRTFSLNHRLVS APSAGVRRSSSSSSSADERHLPL + HHRFD
Sbjct: 1   MKSPDMAAVTDSLEQSFRTFSLNHRLVSPAPSAGVRRSSSSSSSADERHLPLHHHHHRFD 60

Query: 61  TTLELNSHISLPPFWEQCLDLKTGEVYYRNCRTGMRVTEDPRTAEAHSRDLYSEDDDDND 120
           TTLELNSHISLPPFWEQCLDLKTGEVYYRNCRTGMRVTEDPRTAEAH RDLYSEDDDDND
Sbjct: 61  TTLELNSHISLPPFWEQCLDLKTGEVYYRNCRTGMRVTEDPRTAEAHGRDLYSEDDDDND 120

Query: 121 ADESSSDDGSEESCSSSSYGASRQQYPPGKEEDVLVVAGCKRCFMYFMVPKQVEDCPKCS 180
           ADESSSDD SEESCSSSSYGASRQQYPPGKEEDVLVVAGCKRCFMYFMVPKQVEDCPKCS
Sbjct: 121 ADESSSDDSSEESCSSSSYGASRQQYPPGKEEDVLVVAGCKRCFMYFMVPKQVEDCPKCS 180

Query: 181 SSRLVHFDRSEDSNGFP 197
           SSRLVHFDRSEDSNGFP
Sbjct: 181 SSRLVHFDRSEDSNGFP 197

[Close]

BLAST of Carg11570 vs. NCBI nr
Match: XP_023547639.1 (uncharacterized protein LOC111806522 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 374.4 bits (960), Expect = 6.0e-100
Identity = 188/191 (98.43%), Postives = 189/191 (98.95%), Query Frame = 0


Query: 6   MAAVTDSLEQSFRTFSLNHRLVSAAPSAGVRRSSSSSSSADERHLPLNQHHRFDTTLELN 65
           MAAVTDSLEQSFRTFSLNHRLVSA PSAGVRRSSSSSSSAD+RHL LNQHHRFDTTLELN
Sbjct: 1   MAAVTDSLEQSFRTFSLNHRLVSAPPSAGVRRSSSSSSSADQRHLSLNQHHRFDTTLELN 60

Query: 66  SHISLPPFWEQCLDLKTGEVYYRNCRTGMRVTEDPRTAEAHSRDLYSEDDDDNDADESSS 125
           SHISLPPFWEQCLDLKTGEVYYRNCRTGMRVTEDPRTAEAHSRDLYSEDDDDNDADESSS
Sbjct: 61  SHISLPPFWEQCLDLKTGEVYYRNCRTGMRVTEDPRTAEAHSRDLYSEDDDDNDADESSS 120

Query: 126 DDGSEESCSSSSYGASRQQYPPGKEEDVLVVAGCKRCFMYFMVPKQVEDCPKCSSSRLVH 185
           DDGSEESCSSSSYGASRQQYPPGKEEDVLVVAGCKRCFMYFMVPKQVEDCPKCSSSRLVH
Sbjct: 121 DDGSEESCSSSSYGASRQQYPPGKEEDVLVVAGCKRCFMYFMVPKQVEDCPKCSSSRLVH 180

Query: 186 FDRSEDSNGFP 197
           FDRSEDSNGFP
Sbjct: 181 FDRSEDSNGFP 191

[Close]

BLAST of Carg11570 vs. NCBI nr
Match: XP_004140554.1 (uncharacterized protein LOC101221916 [Cucumis sativus] >KGN46421.1 hypothetical protein Csa_005342 [Cucumis sativus])

HSP 1 Score: 331.3 bits (848), Expect = 5.8e-87
Identity = 174/202 (86.14%), Postives = 179/202 (88.61%), Query Frame = 0


Query: 1   MKSPDMAAVTDSLEQSFRTFSLNHRLVSAAP-SAGVRR-----SSSSSSSADERHLPLNQ 60
           MKSPDMAAVTDSLEQSFR FSLNHRL SAAP SAGVRR     SSSSSSS DE HLPL+Q
Sbjct: 1   MKSPDMAAVTDSLEQSFRNFSLNHRLSSAAPSSAGVRRSPSSFSSSSSSSDDEPHLPLHQ 60

Query: 61  HHRFDTTLELNSHISLPPFWEQCLDLKTGEVYYRNCRTGMRVTEDPRTAEAHSRDLYSED 120
           H+RFDT LELNSHISLPPFWEQCLDLKTGEVYYRNCRTGM+V EDPRTA AHSRDLY ED
Sbjct: 61  HNRFDTILELNSHISLPPFWEQCLDLKTGEVYYRNCRTGMKVKEDPRTAVAHSRDLYLED 120

Query: 121 DDDNDADESSSDDGSEESCSSSSYGASRQQYPPGKEEDVLVVAGCKRCFMYFMVPKQVED 180
           DD  D DESSSD GSEESCSSSSYG SRQQYP    EDVLVVAGCKRCFMYFMVPKQVED
Sbjct: 121 DDGEDGDESSSDGGSEESCSSSSYGGSRQQYPAENVEDVLVVAGCKRCFMYFMVPKQVED 180

Query: 181 CPKCSSSRLVHFDRSEDSNGFP 197
           CPKCSSSRLVHFDRS++SNGFP
Sbjct: 181 CPKCSSSRLVHFDRSDESNGFP 202

[Close]

BLAST of Carg11570 vs. ExPASy TrEMBL
Match: A0A6J1GM82 (uncharacterized protein LOC111455780 OS=Cucurbita moschata OX=3662 GN=LOC111455780 PE=4 SV=1)

HSP 1 Score: 388.3 bits (996), Expect = 1.9e-104
Identity = 194/196 (98.98%), Postives = 196/196 (100.00%), Query Frame = 0


Query: 1   MKSPDMAAVTDSLEQSFRTFSLNHRLVSAAPSAGVRRSSSSSSSADERHLPLNQHHRFDT 60
           MKSPDMAAVTDSLEQSFRTFSLNHRL+SAAPSAGVRRSSSSSSSADERHLPLNQHHRFDT
Sbjct: 1   MKSPDMAAVTDSLEQSFRTFSLNHRLLSAAPSAGVRRSSSSSSSADERHLPLNQHHRFDT 60

Query: 61  TLELNSHISLPPFWEQCLDLKTGEVYYRNCRTGMRVTEDPRTAEAHSRDLYSEDDDDNDA 120
           TLELNSHISLPPFWEQCLDLKTGEVYYRNCRTGMRVTEDPRTAEAHSRDLYSEDDD+NDA
Sbjct: 61  TLELNSHISLPPFWEQCLDLKTGEVYYRNCRTGMRVTEDPRTAEAHSRDLYSEDDDENDA 120

Query: 121 DESSSDDGSEESCSSSSYGASRQQYPPGKEEDVLVVAGCKRCFMYFMVPKQVEDCPKCSS 180
           DESSSDDGSEESCSSSSYGASRQQYPPGKEEDVLVVAGCKRCFMYFMVPKQVEDCPKCSS
Sbjct: 121 DESSSDDGSEESCSSSSYGASRQQYPPGKEEDVLVVAGCKRCFMYFMVPKQVEDCPKCSS 180

Query: 181 SRLVHFDRSEDSNGFP 197
           SRLVHFDRSEDSNGFP
Sbjct: 181 SRLVHFDRSEDSNGFP 196

[Close]

BLAST of Carg11570 vs. ExPASy TrEMBL
Match: A0A6J1JMX9 (uncharacterized protein LOC111488350 OS=Cucurbita maxima OX=3661 GN=LOC111488350 PE=4 SV=1)

HSP 1 Score: 376.7 bits (966), Expect = 5.9e-101
Identity = 191/197 (96.95%), Postives = 192/197 (97.46%), Query Frame = 0


Query: 1   MKSPDMAAVTDSLEQSFRTFSLNHRLVSAAPSAGVRRSSSSSSSADERHLPL-NQHHRFD 60
           MKSPDMAAVTDSLEQSFRTFSLNHRLVS APSAGVRRSSSSSSSADERHLPL + HHRFD
Sbjct: 1   MKSPDMAAVTDSLEQSFRTFSLNHRLVSPAPSAGVRRSSSSSSSADERHLPLHHHHHRFD 60

Query: 61  TTLELNSHISLPPFWEQCLDLKTGEVYYRNCRTGMRVTEDPRTAEAHSRDLYSEDDDDND 120
           TTLELNSHISLPPFWEQCLDLKTGEVYYRNCRTGMRVTEDPRTAEAH RDLYSEDDDDND
Sbjct: 61  TTLELNSHISLPPFWEQCLDLKTGEVYYRNCRTGMRVTEDPRTAEAHGRDLYSEDDDDND 120

Query: 121 ADESSSDDGSEESCSSSSYGASRQQYPPGKEEDVLVVAGCKRCFMYFMVPKQVEDCPKCS 180
           ADESSSDD SEESCSSSSYGASRQQYPPGKEEDVLVVAGCKRCFMYFMVPKQVEDCPKCS
Sbjct: 121 ADESSSDDSSEESCSSSSYGASRQQYPPGKEEDVLVVAGCKRCFMYFMVPKQVEDCPKCS 180

Query: 181 SSRLVHFDRSEDSNGFP 197
           SSRLVHFDRSEDSNGFP
Sbjct: 181 SSRLVHFDRSEDSNGFP 197

[Close]

BLAST of Carg11570 vs. ExPASy TrEMBL
Match: A0A0A0KF89 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G091940 PE=4 SV=1)

HSP 1 Score: 331.3 bits (848), Expect = 2.8e-87
Identity = 174/202 (86.14%), Postives = 179/202 (88.61%), Query Frame = 0


Query: 1   MKSPDMAAVTDSLEQSFRTFSLNHRLVSAAP-SAGVRR-----SSSSSSSADERHLPLNQ 60
           MKSPDMAAVTDSLEQSFR FSLNHRL SAAP SAGVRR     SSSSSSS DE HLPL+Q
Sbjct: 1   MKSPDMAAVTDSLEQSFRNFSLNHRLSSAAPSSAGVRRSPSSFSSSSSSSDDEPHLPLHQ 60

Query: 61  HHRFDTTLELNSHISLPPFWEQCLDLKTGEVYYRNCRTGMRVTEDPRTAEAHSRDLYSED 120
           H+RFDT LELNSHISLPPFWEQCLDLKTGEVYYRNCRTGM+V EDPRTA AHSRDLY ED
Sbjct: 61  HNRFDTILELNSHISLPPFWEQCLDLKTGEVYYRNCRTGMKVKEDPRTAVAHSRDLYLED 120

Query: 121 DDDNDADESSSDDGSEESCSSSSYGASRQQYPPGKEEDVLVVAGCKRCFMYFMVPKQVED 180
           DD  D DESSSD GSEESCSSSSYG SRQQYP    EDVLVVAGCKRCFMYFMVPKQVED
Sbjct: 121 DDGEDGDESSSDGGSEESCSSSSYGGSRQQYPAENVEDVLVVAGCKRCFMYFMVPKQVED 180

Query: 181 CPKCSSSRLVHFDRSEDSNGFP 197
           CPKCSSSRLVHFDRS++SNGFP
Sbjct: 181 CPKCSSSRLVHFDRSDESNGFP 202

[Close]

BLAST of Carg11570 vs. ExPASy TrEMBL
Match: A0A5A7TA84 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G002010 PE=4 SV=1)

HSP 1 Score: 327.8 bits (839), Expect = 3.1e-86
Identity = 174/202 (86.14%), Postives = 180/202 (89.11%), Query Frame = 0


Query: 1   MKSPDMAAVTDSLEQSFRTFSLNHRLVSAAP-SAGVRR-----SSSSSSSADERHLPLNQ 60
           MKSPDMAAVTDSLEQSFR FSLNHRL SAAP SAGVRR     SSSSSSS DE HLPL+Q
Sbjct: 1   MKSPDMAAVTDSLEQSFRNFSLNHRLSSAAPSSAGVRRSPSSFSSSSSSSDDEPHLPLHQ 60

Query: 61  HHRFDTTLELNSHISLPPFWEQCLDLKTGEVYYRNCRTGMRVTEDPRTAEAHSRDLYSED 120
           H+RFDT LELNSHISLPPFWEQCLDLKTGEVYYRNCRTGM+V EDPRTA AHSRDLYSED
Sbjct: 61  HNRFDTILELNSHISLPPFWEQCLDLKTGEVYYRNCRTGMKVKEDPRTAVAHSRDLYSED 120

Query: 121 DDDNDADESSSDDGSEESCSSSSYGASRQQYPPGKEEDVLVVAGCKRCFMYFMVPKQVED 180
           D + D DESSSD GSEESCSSSSYG SRQQYP    EDVLVVAGCKRCFMYFMVPKQVED
Sbjct: 121 DGE-DGDESSSDGGSEESCSSSSYGGSRQQYPAENVEDVLVVAGCKRCFMYFMVPKQVED 180

Query: 181 CPKCSSSRLVHFDRSEDSNGFP 197
           CPKCSSSRLVHFDRS++SNGFP
Sbjct: 181 CPKCSSSRLVHFDRSDESNGFP 201

[Close]

BLAST of Carg11570 vs. ExPASy TrEMBL
Match: A0A1S4E3A8 (uncharacterized protein LOC103498882 OS=Cucumis melo OX=3656 GN=LOC103498882 PE=4 SV=1)

HSP 1 Score: 317.0 bits (811), Expect = 5.5e-83
Identity = 169/198 (85.35%), Postives = 176/198 (88.89%), Query Frame = 0


Query: 1   MKSPDMAAVTDSLEQSFRTFSLNHRLVSAAP-SAGVRR-----SSSSSSSADERHLPLNQ 60
           MKSPDMAAVTDSLEQSFR FSLNHRL SAAP SAGVRR     SSSSSSS DE HLPL+Q
Sbjct: 1   MKSPDMAAVTDSLEQSFRNFSLNHRLSSAAPSSAGVRRSPSSFSSSSSSSDDEPHLPLHQ 60

Query: 61  HHRFDTTLELNSHISLPPFWEQCLDLKTGEVYYRNCRTGMRVTEDPRTAEAHSRDLYSED 120
           H+RFDT LELNSHISLPPFWEQCLDLKTGEVYYRNCRTGM+V EDPRTA AHSRDLYSED
Sbjct: 61  HNRFDTILELNSHISLPPFWEQCLDLKTGEVYYRNCRTGMKVKEDPRTAVAHSRDLYSED 120

Query: 121 DDDNDADESSSDDGSEESCSSSSYGASRQQYPPGKEEDVLVVAGCKRCFMYFMVPKQVED 180
           D + D DESSSD GSEESCSSSSYG SRQQYP    EDVLVVAGCKRCFMYFMVPKQVED
Sbjct: 121 DGE-DGDESSSDGGSEESCSSSSYGGSRQQYPAENVEDVLVVAGCKRCFMYFMVPKQVED 180

Query: 181 CPKCSSSRLVHFDRSEDS 193
           CPKCSSSRLVHFDRS+++
Sbjct: 181 CPKCSSSRLVHFDRSDET 197

[Close]

BLAST of Carg11570 vs. TAIR 10
Match: AT2G33510.1 (CONTAINS InterPro DOMAIN/s: WW/Rsp5/WWP (InterPro:IPR001202); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G28070.1); Has 3898 Blast hits to 1138 proteins in 179 species: Archae - 0; Bacteria - 40; Metazoa - 2353; Fungi - 242; Plants - 298; Viruses - 92; Other Eukaryotes - 873 (source: NCBI BLink). )

HSP 1 Score: 149.4 bits (376), Expect = 2.9e-36
Identity = 95/200 (47.50%), Postives = 120/200 (60.00%), Query Frame = 0


Query: 1   MKSPDMAAVTDSLEQSFRTFSLNHRLVSAAPSAGVRRSSSSSSSADERHLPLNQHHRFDT 60
           MK+P+M  +T+SLE+S    SLN R         V       SS++E   P++     D 
Sbjct: 1   MKAPNMETITESLEKSMMNCSLNDR------RRRVVGDGFGRSSSNEHMTPIS-----DR 60

Query: 61  TLELNSHISLPPFWEQCLDLKTGEVYYRNCRTGMRVTEDPR---TAEAHSRDLY----SE 120
           TLELNSH+SLP  WEQCLDLKTGE+YY N + GMRV EDPR    A+  S D Y    SE
Sbjct: 61  TLELNSHLSLPCHWEQCLDLKTGEIYYINWKNGMRVKEDPRKVMNADPDSGDSYGTVCSE 120

Query: 121 DDDDNDADESSSDDGSEESCSSSSYGASRQQYPPGKEEDVLVVAGCKRCFMYFMVPKQVE 180
           +D      E SS + S  S  +       ++    +EEDVLVVAGCK CFMYFMVPK VE
Sbjct: 121 EDSSYYDSEESSSESSPSSRENHKEEEEEEEEEEEEEEDVLVVAGCKACFMYFMVPKLVE 180

Query: 181 DCPKCSSSRLVHFDRSEDSN 194
           DCPKC +++L+HFDR   ++
Sbjct: 181 DCPKC-AAQLLHFDRPHSAS 188

[Close]

BLAST of Carg11570 vs. TAIR 10
Match: AT2G33510.2 (unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G28070.1). )

HSP 1 Score: 139.4 bits (350), Expect = 3.0e-33
Identity = 95/215 (44.19%), Postives = 120/215 (55.81%), Query Frame = 0


Query: 1   MKSPDMAAVTDSLEQSFRTFSLNHRLVSAAPSAGVRRSSSSSSSADERHLPLNQHHRFDT 60
           MK+P+M  +T+SLE+S    SLN R         V       SS++E   P++     D 
Sbjct: 1   MKAPNMETITESLEKSMMNCSLNDR------RRRVVGDGFGRSSSNEHMTPIS-----DR 60

Query: 61  TLELNSHISLPPFWEQCLDLK---------------TGEVYYRNCRTGMRVTEDPR---T 120
           TLELNSH+SLP  WEQCLDLK               TGE+YY N + GMRV EDPR    
Sbjct: 61  TLELNSHLSLPCHWEQCLDLKVKLITTETSNSCRFRTGEIYYINWKNGMRVKEDPRKVMN 120

Query: 121 AEAHSRDLY----SEDDDDNDADESSSDDGSEESCSSSSYGASRQQYPPGKEEDVLVVAG 180
           A+  S D Y    SE+D      E SS + S  S  +       ++    +EEDVLVVAG
Sbjct: 121 ADPDSGDSYGTVCSEEDSSYYDSEESSSESSPSSRENHKEEEEEEEEEEEEEEDVLVVAG 180

Query: 181 CKRCFMYFMVPKQVEDCPKCSSSRLVHFDRSEDSN 194
           CK CFMYFMVPK VEDCPKC +++L+HFDR   ++
Sbjct: 181 CKACFMYFMVPKLVEDCPKC-AAQLLHFDRPHSAS 203

[Close]

BLAST of Carg11570 vs. TAIR 10
Match: AT1G28070.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G33510.1); Has 85 Blast hits to 77 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 85; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 124.0 bits (310), Expect = 1.3e-28
Identity = 84/189 (44.44%), Postives = 114/189 (60.32%), Query Frame = 0


Query: 6   MAAVTDSLEQSFRTFSLNHRLVSAAPSAGVRRSSSSSSSADERHLPLNQHHRFDTTLELN 65
           MA +T+ LE+S +  SL  R          R S        + H+P++     D  LEL+
Sbjct: 1   MADITEYLERSMQNCSLIDR----------RSSMGDGFGMSDEHIPIS-----DRFLELS 60

Query: 66  SHISLPPFWEQCLDLKTGEVYYRNCRTGMRVTEDPRTAEAHSRDLYSEDDDDN------D 125
           SH S+P   EQCLDLKTGE+YYR+  +GMRV EDPR  ++ SR  Y++            
Sbjct: 61  SHFSVPSHLEQCLDLKTGEIYYRSWNSGMRVKEDPR--KSMSRGNYADQSSGESSGTVFS 120

Query: 126 ADESSSDDGSEESCSSSSYGASRQQYPPGKEEDVLVVAGCKRCFMYFMVPKQVEDCPKCS 185
           ++E SS   SEES S SS  +SR+ +   ++EDVLVVAGCK C MYFMVPK  +DCPKC 
Sbjct: 121 SEEVSSYYESEESSSESS-PSSRKYHKEEQDEDVLVVAGCKACLMYFMVPKLFKDCPKC- 170

Query: 186 SSRLVHFDR 189
           +++L+HFD+
Sbjct: 181 ATQLLHFDQ 170

The following BLAST results are available for this feature:

BLAST of Carg11570 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6576106.1	6.2e-105	100.00	hypothetical protein SDJN03_26745, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022953156.1	4.0e-104	98.98	uncharacterized protein LOC111455780 [Cucurbita moschata]	[more]
XP_022991817.1	1.2e-100	96.95	uncharacterized protein LOC111488350 [Cucurbita maxima]	[more]
XP_023547639.1	6.0e-100	98.43	uncharacterized protein LOC111806522 [Cucurbita pepo subsp. pepo]	[more]
XP_004140554.1	5.8e-87	86.14	uncharacterized protein LOC101221916 [Cucumis sativus] >KGN46421.1 hypothetical ...	[more]

BLAST of Carg11570 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg11570 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GM82	1.9e-104	98.98	uncharacterized protein LOC111455780 OS=Cucurbita moschata OX=3662 GN=LOC1114557...	[more]
A0A6J1JMX9	5.9e-101	96.95	uncharacterized protein LOC111488350 OS=Cucurbita maxima OX=3661 GN=LOC111488350...	[more]
A0A0A0KF89	2.8e-87	86.14	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G091940 PE=4 SV=1	[more]
A0A5A7TA84	3.1e-86	86.14	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S4E3A8	5.5e-83	85.35	uncharacterized protein LOC103498882 OS=Cucumis melo OX=3656 GN=LOC103498882 PE=...	[more]

BLAST of Carg11570 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G33510.1	2.9e-36	47.50	CONTAINS InterPro DOMAIN/s: WW/Rsp5/WWP (InterPro:IPR001202); BEST Arabidopsis t...	[more]
AT2G33510.2	3.0e-33	44.19	unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_c...	[more]
AT1G28070.1	1.3e-28	44.44	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	2.20.70.10		coord: 69..108 e-value: 8.7E-6 score: 27.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 129..143
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 98..149
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 114..128
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 33..48
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 31..52
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 98..113
None	No IPR available	PANTHER	PTHR14791	BOMB/KIRA PROTEINS	coord: 12..190
None	No IPR available	PANTHER	PTHR14791:SF43	BNAA04G19570D PROTEIN	coord: 12..190
IPR036020	WW domain superfamily	SUPERFAMILY	51045	WW domain	coord: 66..102

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg11570-RA	Carg11570-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding