Carg11559 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg11559
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionethylene-responsive transcription factor ERF113-like
LocationCarg_Chr17: 9727913 .. 9728443 (-)
RNA-Seq ExpressionCarg11559
SyntenyCarg11559
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAGAAACAGAGAGGAAGATACATTATAGAGGCGTGAGACAAAGACCATGGGGGAAATGGGCGGCGGAGATTCGTGACCCGAAGAAAGCGGCTAGAGTTTGGCTTGGCACTTTCGACACGGCCGAGGCTGCTGCCATTGCGTATGATAACGCCGCTTTGAGGTTTAAAGGCACCAAGGCCAAGCTTAATTTTCCCGAACGAGTTCAAGCCAACCCTGCTGAGTTTGGCTTCCTTCCCTCCACTGGCGGTGCCGCTGCAGCTCCGGCAACCGTAGCATCCTTGTCATCATCGTCGTCATCATCATCTTCTGTTGCTCTTGTCCCGCGGTTGCCGCAGGAAGAAGCCTTCCCCGGCCTTCACCAGTACGCCCAACTCCTCTCCAGCACCGACGCCGACTTCCCTTATTATTCTTCCACTCTTCTCAACCAACAACCCCATTACCCTTTCTCTTCTTCACCCAGCCACCCACACCAACAAGACCACGATCACTACGGCAAAGATTTTGGCCCCGGTGGCTCAACCAATTAG

mRNA sequence

ATGGCAGAAACAGAGAGGAAGATACATTATAGAGGCGTGAGACAAAGACCATGGGGGAAATGGGCGGCGGAGATTCGTGACCCGAAGAAAGCGGCTAGAGTTTGGCTTGGCACTTTCGACACGGCCGAGGCTGCTGCCATTGCGTATGATAACGCCGCTTTGAGGTTTAAAGGCACCAAGGCCAAGCTTAATTTTCCCGAACGAGTTCAAGCCAACCCTGCTGAGTTTGGCTTCCTTCCCTCCACTGGCGGTGCCGCTGCAGCTCCGGCAACCGTAGCATCCTTGTCATCATCGTCGTCATCATCATCTTCTGTTGCTCTTGTCCCGCGGTTGCCGCAGGAAGAAGCCTTCCCCGGCCTTCACCAGTACGCCCAACTCCTCTCCAGCACCGACGCCGACTTCCCTTATTATTCTTCCACTCTTCTCAACCAACAACCCCATTACCCTTTCTCTTCTTCACCCAGCCACCCACACCAACAAGACCACGATCACTACGGCAAAGATTTTGGCCCCGGTGGCTCAACCAATTAG

Coding sequence (CDS)

ATGGCAGAAACAGAGAGGAAGATACATTATAGAGGCGTGAGACAAAGACCATGGGGGAAATGGGCGGCGGAGATTCGTGACCCGAAGAAAGCGGCTAGAGTTTGGCTTGGCACTTTCGACACGGCCGAGGCTGCTGCCATTGCGTATGATAACGCCGCTTTGAGGTTTAAAGGCACCAAGGCCAAGCTTAATTTTCCCGAACGAGTTCAAGCCAACCCTGCTGAGTTTGGCTTCCTTCCCTCCACTGGCGGTGCCGCTGCAGCTCCGGCAACCGTAGCATCCTTGTCATCATCGTCGTCATCATCATCTTCTGTTGCTCTTGTCCCGCGGTTGCCGCAGGAAGAAGCCTTCCCCGGCCTTCACCAGTACGCCCAACTCCTCTCCAGCACCGACGCCGACTTCCCTTATTATTCTTCCACTCTTCTCAACCAACAACCCCATTACCCTTTCTCTTCTTCACCCAGCCACCCACACCAACAAGACCACGATCACTACGGCAAAGATTTTGGCCCCGGTGGCTCAACCAATTAG

Protein sequence

MAETERKIHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEAAAIAYDNAALRFKGTKAKLNFPERVQANPAEFGFLPSTGGAAAAPATVASLSSSSSSSSSVALVPRLPQEEAFPGLHQYAQLLSSTDADFPYYSSTLLNQQPHYPFSSSPSHPHQQDHDHYGKDFGPGGSTN
Homology
[Close]
BLAST of Carg11559 vs. NCBI nr
Match: KAG7014616.1 (Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 348.2 bits (892), Expect = 4.1e-92
Identity = 176/176 (100.00%), Postives = 176/176 (100.00%), Query Frame = 0 

Query: 1   MAETERKIHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEAAAIAYDNAALRFKGTK 60
           MAETERKIHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEAAAIAYDNAALRFKGTK
Sbjct: 1   MAETERKIHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEAAAIAYDNAALRFKGTK 60

Query: 61  AKLNFPERVQANPAEFGFLPSTGGAAAAPATVASLSSSSSSSSSVALVPRLPQEEAFPGL 120
           AKLNFPERVQANPAEFGFLPSTGGAAAAPATVASLSSSSSSSSSVALVPRLPQEEAFPGL
Sbjct: 61  AKLNFPERVQANPAEFGFLPSTGGAAAAPATVASLSSSSSSSSSVALVPRLPQEEAFPGL 120

Query: 121 HQYAQLLSSTDADFPYYSSTLLNQQPHYPFSSSPSHPHQQDHDHYGKDFGPGGSTN 177
           HQYAQLLSSTDADFPYYSSTLLNQQPHYPFSSSPSHPHQQDHDHYGKDFGPGGSTN
Sbjct: 121 HQYAQLLSSTDADFPYYSSTLLNQQPHYPFSSSPSHPHQQDHDHYGKDFGPGGSTN 176

[Close]
BLAST of Carg11559 vs. NCBI nr
Match: KAG6576097.1 (Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 345.5 bits (885), Expect = 2.7e-91
Identity = 175/176 (99.43%), Postives = 175/176 (99.43%), Query Frame = 0 

Query: 1   MAETERKIHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEAAAIAYDNAALRFKGTK 60
           MAETERKIHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEAAAIAYDNAALRFKGTK
Sbjct: 8   MAETERKIHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEAAAIAYDNAALRFKGTK 67

Query: 61  AKLNFPERVQANPAEFGFLPSTGGAAAAPATVASLSSSSSSSSSVALVPRLPQEEAFPGL 120
           AKLNFPERVQANPAEFGFLPSTGGAAAAPATVASLSSSSSSSSSVALVP LPQEEAFPGL
Sbjct: 68  AKLNFPERVQANPAEFGFLPSTGGAAAAPATVASLSSSSSSSSSVALVPPLPQEEAFPGL 127

Query: 121 HQYAQLLSSTDADFPYYSSTLLNQQPHYPFSSSPSHPHQQDHDHYGKDFGPGGSTN 177
           HQYAQLLSSTDADFPYYSSTLLNQQPHYPFSSSPSHPHQQDHDHYGKDFGPGGSTN
Sbjct: 128 HQYAQLLSSTDADFPYYSSTLLNQQPHYPFSSSPSHPHQQDHDHYGKDFGPGGSTN 183

[Close]
BLAST of Carg11559 vs. NCBI nr
Match: XP_023548873.1 (ethylene-responsive transcription factor ERF113-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 327.4 bits (838), Expect = 7.6e-86
Identity = 168/176 (95.45%), Postives = 171/176 (97.16%), Query Frame = 0 

Query: 1   MAETERKIHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEAAAIAYDNAALRFKGTK 60
           MAETERKIHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEAAAIAYDNAALRFKGTK
Sbjct: 8   MAETERKIHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEAAAIAYDNAALRFKGTK 67

Query: 61  AKLNFPERVQANPAEFGFLPSTGGAAAAPATVASLSSSSSSSSSVALVPRLPQEEAFPGL 120
           AKLNFPERVQANPAEFGFLPSTGGAAAAPATVASL SSSSSSSS++L+P LPQEEAFPGL
Sbjct: 68  AKLNFPERVQANPAEFGFLPSTGGAAAAPATVASL-SSSSSSSSISLLPPLPQEEAFPGL 127

Query: 121 HQYAQLLSSTDADFPYYSSTLLNQQPHYPFSSSPSHPHQQDHDHYGKDFGPGGSTN 177
           HQYAQLLSSTDADFPYYSSTLLNQQPHYPFSSSPSHP  QDHDHYGKDFG GGSTN
Sbjct: 128 HQYAQLLSSTDADFPYYSSTLLNQQPHYPFSSSPSHPLPQDHDHYGKDFGAGGSTN 182

[Close]
BLAST of Carg11559 vs. NCBI nr
Match: XP_022953884.1 (ethylene-responsive transcription factor ERF113-like [Cucurbita moschata])

HSP 1 Score: 326.2 bits (835), Expect = 1.7e-85
Identity = 168/173 (97.11%), Postives = 169/173 (97.69%), Query Frame = 0 

Query: 5   ERKIHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEAAAIAYDNAALRFKGTKAKLN 64
           ERKIHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEAAAIAYDNAALRFKGTKAKLN
Sbjct: 61  ERKIHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEAAAIAYDNAALRFKGTKAKLN 120

Query: 65  FPERVQANPAEFGFLPSTGGAAAAPATVASL-SSSSSSSSSVALVPRLPQEEAFPGLHQY 124
           FPERVQANPAEFGFLPSTGGAAAAPATVASL SSSSSSSSSVAL+P LPQ EAFPGLHQY
Sbjct: 121 FPERVQANPAEFGFLPSTGGAAAAPATVASLSSSSSSSSSSVALLPPLPQGEAFPGLHQY 180

Query: 125 AQLLSSTDADFPYYSSTLLNQQPHYPFSSSPSHPHQQDHDHYGKDFGPGGSTN 177
           AQLLSSTDADFPYYSSTLLNQQPHYPFSSSPSHPHQQDHDHYGKDFG GGSTN
Sbjct: 181 AQLLSSTDADFPYYSSTLLNQQPHYPFSSSPSHPHQQDHDHYGKDFGAGGSTN 233

[Close]
BLAST of Carg11559 vs. NCBI nr
Match: XP_022991755.1 (ethylene-responsive transcription factor ERF113-like, partial [Cucurbita maxima])

HSP 1 Score: 320.9 bits (821), Expect = 7.1e-84
Identity = 165/174 (94.83%), Postives = 166/174 (95.40%), Query Frame = 0 

Query: 3   ETERKIHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEAAAIAYDNAALRFKGTKAK 62
           ETERKIHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEAAAIAYDNAALRFKGTKAK
Sbjct: 79  ETERKIHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEAAAIAYDNAALRFKGTKAK 138

Query: 63  LNFPERVQANPAEFGFLPSTGGAAAAPATVASLSSSSSSSSSVALVPRLPQEEAFPGLHQ 122
           LNFPERVQANPAEFGFLPSTGGAAAAPATVASL    SSSSSVAL+P LPQEEAFPGL Q
Sbjct: 139 LNFPERVQANPAEFGFLPSTGGAAAAPATVASL----SSSSSVALLPPLPQEEAFPGLQQ 198

Query: 123 YAQLLSSTDADFPYYSSTLLNQQPHYPFSSSPSHPHQQDHDHYGKDFGPGGSTN 177
           YAQLLSSTDADFPYYSSTLLNQQPHYPFSSSPSHP QQDHDHYGKDFG GGSTN
Sbjct: 199 YAQLLSSTDADFPYYSSTLLNQQPHYPFSSSPSHPRQQDHDHYGKDFGAGGSTN 248

[Close]
BLAST of Carg11559 vs. ExPASy Swiss-Prot
Match: Q9LYU3 (Ethylene-responsive transcription factor ERF113 OS=Arabidopsis thaliana OX=3702 GN=ERF113 PE=2 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 4.7e-30
Identity = 87/161 (54.04%), Postives = 101/161 (62.73%), Query Frame = 0 

Query: 6   RKIHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEAAAIAYDNAALRFKGTKAKLNF 65
           R+ HYRGVRQRPWGKWAAEIRDPKKAARVWLGTF+TAE AA+AYD AAL+FKGTKAKLNF
Sbjct: 35  RRRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFETAEEAALAYDRAALKFKGTKAKLNF 94

Query: 66  PERVQANPAEFGFLPSTGGAAAAPATVASLSSSSSSSSSVALVPRLPQEEAFP-----GL 125
           PERVQ          +T   + AP  V    S S +S      P      ++P      +
Sbjct: 95  PERVQGP-------TTTTTISHAPRGV----SESMNSPPPRPGPPSTTTTSWPMTYNQDI 154

Query: 126 HQYAQLL-SSTDADFPYYSSTLLNQQPHYPFSSSPSHPHQQ 161
            QYAQLL S+ + D  YY+STL +Q    P SSS S    Q
Sbjct: 155 LQYAQLLTSNNEVDLSYYTSTLFSQPFSTPSSSSSSSQQTQ 184

[Close]
BLAST of Carg11559 vs. ExPASy Swiss-Prot
Match: Q9LY29 (Ethylene-responsive transcription factor ERF115 OS=Arabidopsis thaliana OX=3702 GN=ERF115 PE=1 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 2.0e-28
Identity = 58/65 (89.23%), Postives = 63/65 (96.92%), Query Frame = 0 

Query: 6   RKIHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEAAAIAYDNAALRFKGTKAKLNF 65
           RK HYRGVRQRPWGKWAAEIRDP+KAARVWLGTF+TAEAAA+AYDNAAL+FKG+KAKLNF
Sbjct: 88  RKRHYRGVRQRPWGKWAAEIRDPQKAARVWLGTFETAEAAALAYDNAALKFKGSKAKLNF 147

Query: 66  PERVQ 71
           PER Q
Sbjct: 148 PERAQ 152

[Close]
BLAST of Carg11559 vs. ExPASy Swiss-Prot
Match: Q9FH54 (Ethylene-responsive transcription factor ERF114 OS=Arabidopsis thaliana OX=3702 GN=ERF114 PE=1 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 5.7e-28
Identity = 57/65 (87.69%), Postives = 63/65 (96.92%), Query Frame = 0 

Query: 6   RKIHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEAAAIAYDNAALRFKGTKAKLNF 65
           R+ HYRGVRQRPWGKWAAEIRDPKKAARVWLGTF+TAE+AA+AYD AAL+FKG+KAKLNF
Sbjct: 86  RRRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFETAESAALAYDEAALKFKGSKAKLNF 145

Query: 66  PERVQ 71
           PERVQ
Sbjct: 146 PERVQ 150

[Close]
BLAST of Carg11559 vs. ExPASy Swiss-Prot
Match: Q70II3 (Ethylene-responsive transcription factor ERF110 OS=Arabidopsis thaliana OX=3702 GN=ERF110 PE=2 SV=2)

HSP 1 Score: 115.2 bits (287), Expect = 7.7e-25
Identity = 60/86 (69.77%), Postives = 64/86 (74.42%), Query Frame = 0 

Query: 5   ERKIHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEAAAIAYDNAALRFKGTKAKLN 64
           E+K  YRGVRQRPWGKWAAEIRDP +AARVWLGTFDTAEAAA AYD AALRF+G KAKLN
Sbjct: 72  EKKRRYRGVRQRPWGKWAAEIRDPHRAARVWLGTFDTAEAAARAYDEAALRFRGNKAKLN 131

Query: 65  FPERVQANPAEFGFLPSTGGAAAAPA 91
           FPE V+  P     L S     A  A
Sbjct: 132 FPEDVRILPPPPPLLRSPADTVANKA 157

[Close]
BLAST of Carg11559 vs. ExPASy Swiss-Prot
Match: Q7G1L2 (Ethylene-responsive transcription factor RAP2-6 OS=Arabidopsis thaliana OX=3702 GN=RAP2-6 PE=2 SV=2)

HSP 1 Score: 113.2 bits (282), Expect = 2.9e-24
Identity = 54/65 (83.08%), Postives = 57/65 (87.69%), Query Frame = 0 

Query: 5   ERKIHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEAAAIAYDNAALRFKGTKAKLN 64
           ER   YRGVRQRPWGKWAAEIRDP KA RVWLGTF+TAEAAA AYD AALRF+G+KAKLN
Sbjct: 56  ERPKKYRGVRQRPWGKWAAEIRDPHKATRVWLGTFETAEAAARAYDAAALRFRGSKAKLN 115

Query: 65  FPERV 70
           FPE V
Sbjct: 116 FPENV 120

[Close]
BLAST of Carg11559 vs. ExPASy TrEMBL
Match: A0A6J1GR63 (ethylene-responsive transcription factor ERF113-like OS=Cucurbita moschata OX=3662 GN=LOC111456288 PE=4 SV=1)

HSP 1 Score: 326.2 bits (835), Expect = 8.1e-86
Identity = 168/173 (97.11%), Postives = 169/173 (97.69%), Query Frame = 0 

Query: 5   ERKIHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEAAAIAYDNAALRFKGTKAKLN 64
           ERKIHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEAAAIAYDNAALRFKGTKAKLN
Sbjct: 61  ERKIHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEAAAIAYDNAALRFKGTKAKLN 120

Query: 65  FPERVQANPAEFGFLPSTGGAAAAPATVASL-SSSSSSSSSVALVPRLPQEEAFPGLHQY 124
           FPERVQANPAEFGFLPSTGGAAAAPATVASL SSSSSSSSSVAL+P LPQ EAFPGLHQY
Sbjct: 121 FPERVQANPAEFGFLPSTGGAAAAPATVASLSSSSSSSSSSVALLPPLPQGEAFPGLHQY 180

Query: 125 AQLLSSTDADFPYYSSTLLNQQPHYPFSSSPSHPHQQDHDHYGKDFGPGGSTN 177
           AQLLSSTDADFPYYSSTLLNQQPHYPFSSSPSHPHQQDHDHYGKDFG GGSTN
Sbjct: 181 AQLLSSTDADFPYYSSTLLNQQPHYPFSSSPSHPHQQDHDHYGKDFGAGGSTN 233

[Close]
BLAST of Carg11559 vs. ExPASy TrEMBL
Match: A0A6J1JTV1 (ethylene-responsive transcription factor ERF113-like OS=Cucurbita maxima OX=3661 GN=LOC111488287 PE=4 SV=1)

HSP 1 Score: 320.9 bits (821), Expect = 3.4e-84
Identity = 165/174 (94.83%), Postives = 166/174 (95.40%), Query Frame = 0 

Query: 3   ETERKIHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEAAAIAYDNAALRFKGTKAK 62
           ETERKIHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEAAAIAYDNAALRFKGTKAK
Sbjct: 79  ETERKIHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEAAAIAYDNAALRFKGTKAK 138

Query: 63  LNFPERVQANPAEFGFLPSTGGAAAAPATVASLSSSSSSSSSVALVPRLPQEEAFPGLHQ 122
           LNFPERVQANPAEFGFLPSTGGAAAAPATVASL    SSSSSVAL+P LPQEEAFPGL Q
Sbjct: 139 LNFPERVQANPAEFGFLPSTGGAAAAPATVASL----SSSSSVALLPPLPQEEAFPGLQQ 198

Query: 123 YAQLLSSTDADFPYYSSTLLNQQPHYPFSSSPSHPHQQDHDHYGKDFGPGGSTN 177
           YAQLLSSTDADFPYYSSTLLNQQPHYPFSSSPSHP QQDHDHYGKDFG GGSTN
Sbjct: 199 YAQLLSSTDADFPYYSSTLLNQQPHYPFSSSPSHPRQQDHDHYGKDFGAGGSTN 248

[Close]
BLAST of Carg11559 vs. ExPASy TrEMBL
Match: A0A6J1KRN4 (ethylene-responsive transcription factor ERF113-like OS=Cucurbita maxima OX=3661 GN=LOC111498070 PE=4 SV=1)

HSP 1 Score: 241.5 bits (615), Expect = 2.6e-60
Identity = 130/183 (71.04%), Postives = 142/183 (77.60%), Query Frame = 0 

Query: 3   ETERKIHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEAAAIAYDNAALRFKGTKAK 62
           E+  K HYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEAAAIAYDNAALRFKG KAK
Sbjct: 50  ESGSKRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEAAAIAYDNAALRFKGNKAK 109

Query: 63  LNFPERVQANPAEFGFLPSTGGAAAAPATVASLSSSSSSSSSVALVPRLPQEEAFPGLHQ 122
           LNFPER+Q NP  F FLP+ G A++AP    +L+S SS S     +P L  +EAFPGLHQ
Sbjct: 110 LNFPERLQPNPPHFAFLPAGGAASSAPVAPPALASLSSPSPPP--LPPLSHQEAFPGLHQ 169

Query: 123 YAQLLSSTDADFPYYSSTLLNQQPHYPFSSSPSHPH---------QQDHDHYGKDFGPGG 177
           YAQLLSSTDADFPYYSSTLLNQ  HYPF SS S  H         +Q+ + YGKDFGPGG
Sbjct: 170 YAQLLSSTDADFPYYSSTLLNQPNHYPFYSSSSSQHHQQEQEQEQEQEQEQYGKDFGPGG 229

[Close]
BLAST of Carg11559 vs. ExPASy TrEMBL
Match: A0A0A0K9G5 (AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G091830 PE=4 SV=1)

HSP 1 Score: 239.6 bits (610), Expect = 1.0e-59
Identity = 135/182 (74.18%), Postives = 142/182 (78.02%), Query Frame = 0 

Query: 1   MAETE---RKIHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEAAAIAYDNAALRFK 60
           MAE++   RK HYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEAAAIAYDNAALRFK
Sbjct: 15  MAESDQSGRKRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEAAAIAYDNAALRFK 74

Query: 61  GTKAKLNFPERVQANPAEFGFLPSTGGAAAAPATVASLSSSSSSSSSVALVPRLPQEEAF 120
           GTKAKLNFPERVQANPAEFGFL     AA  P T         SS SV+L P L  EEAF
Sbjct: 75  GTKAKLNFPERVQANPAEFGFLSPASIAAPPPPTAV-------SSPSVSLPPPLSHEEAF 134

Query: 121 PGLHQYAQLLSSTDADFPYYSSTLL--NQQPHYPF---SSSPSHPHQQDHDHYGKDFGPG 175
           PGLHQYAQLLSS+DADFPYYSS+LL   QQ HYPF   SSS S   Q+D D YG+DFG G
Sbjct: 135 PGLHQYAQLLSSSDADFPYYSSSLLFNQQQSHYPFFSSSSSSSQQQQEDQDRYGEDFGTG 189

[Close]
BLAST of Carg11559 vs. ExPASy TrEMBL
Match: A0A5D3DLW8 (Ethylene-responsive transcription factor ERF113-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G001920 PE=4 SV=1)

HSP 1 Score: 237.3 bits (604), Expect = 5.0e-59
Identity = 134/182 (73.63%), Postives = 140/182 (76.92%), Query Frame = 0 

Query: 1   MAETE---RKIHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEAAAIAYDNAALRFK 60
           MAE +   RK HYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEAAAIAYDNAALRFK
Sbjct: 1   MAEADQGGRKRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEAAAIAYDNAALRFK 60

Query: 61  GTKAKLNFPERVQANPAEFGFLPSTGGAAAAPATVASLSSSSSSSSSVALVPRLPQEEAF 120
           GTKAKLNFPERVQANPAEFGFL     AA  P T         SS SV+L P L  EE F
Sbjct: 61  GTKAKLNFPERVQANPAEFGFLSPPSIAAPPPPTAV-------SSPSVSLPPPLSHEEVF 120

Query: 121 PGLHQYAQLLSSTDADFPYYSSTLL--NQQPHYPF---SSSPSHPHQQDHDHYGKDFGPG 175
           PGLHQYAQLLSS+DADFPYYSS+LL   QQ HYPF   SSS S   Q+D D YG+DFG G
Sbjct: 121 PGLHQYAQLLSSSDADFPYYSSSLLFNQQQSHYPFFSSSSSSSQQQQEDQDRYGEDFGTG 175

[Close]
BLAST of Carg11559 vs. TAIR 10
Match: AT5G13330.1 (related to AP2 6l )

HSP 1 Score: 132.5 bits (332), Expect = 3.3e-31
Identity = 87/161 (54.04%), Postives = 101/161 (62.73%), Query Frame = 0 

Query: 6   RKIHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEAAAIAYDNAALRFKGTKAKLNF 65
           R+ HYRGVRQRPWGKWAAEIRDPKKAARVWLGTF+TAE AA+AYD AAL+FKGTKAKLNF
Sbjct: 35  RRRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFETAEEAALAYDRAALKFKGTKAKLNF 94

Query: 66  PERVQANPAEFGFLPSTGGAAAAPATVASLSSSSSSSSSVALVPRLPQEEAFP-----GL 125
           PERVQ          +T   + AP  V    S S +S      P      ++P      +
Sbjct: 95  PERVQGP-------TTTTTISHAPRGV----SESMNSPPPRPGPPSTTTTSWPMTYNQDI 154

Query: 126 HQYAQLL-SSTDADFPYYSSTLLNQQPHYPFSSSPSHPHQQ 161
            QYAQLL S+ + D  YY+STL +Q    P SSS S    Q
Sbjct: 155 LQYAQLLTSNNEVDLSYYTSTLFSQPFSTPSSSSSSSQQTQ 184

[Close]
BLAST of Carg11559 vs. TAIR 10
Match: AT5G07310.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 127.1 bits (318), Expect = 1.4e-29
Identity = 58/65 (89.23%), Postives = 63/65 (96.92%), Query Frame = 0 

Query: 6   RKIHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEAAAIAYDNAALRFKGTKAKLNF 65
           RK HYRGVRQRPWGKWAAEIRDP+KAARVWLGTF+TAEAAA+AYDNAAL+FKG+KAKLNF
Sbjct: 88  RKRHYRGVRQRPWGKWAAEIRDPQKAARVWLGTFETAEAAALAYDNAALKFKGSKAKLNF 147

Query: 66  PERVQ 71
           PER Q
Sbjct: 148 PERAQ 152

[Close]
BLAST of Carg11559 vs. TAIR 10
Match: AT5G61890.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 125.6 bits (314), Expect = 4.1e-29
Identity = 57/65 (87.69%), Postives = 63/65 (96.92%), Query Frame = 0 

Query: 6   RKIHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEAAAIAYDNAALRFKGTKAKLNF 65
           R+ HYRGVRQRPWGKWAAEIRDPKKAARVWLGTF+TAE+AA+AYD AAL+FKG+KAKLNF
Sbjct: 86  RRRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFETAESAALAYDEAALKFKGSKAKLNF 145

Query: 66  PERVQ 71
           PERVQ
Sbjct: 146 PERVQ 150

[Close]
BLAST of Carg11559 vs. TAIR 10
Match: AT5G50080.1 (ethylene response factor 110 )

HSP 1 Score: 115.2 bits (287), Expect = 5.5e-26
Identity = 60/86 (69.77%), Postives = 64/86 (74.42%), Query Frame = 0 

Query: 5   ERKIHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEAAAIAYDNAALRFKGTKAKLN 64
           E+K  YRGVRQRPWGKWAAEIRDP +AARVWLGTFDTAEAAA AYD AALRF+G KAKLN
Sbjct: 72  EKKRRYRGVRQRPWGKWAAEIRDPHRAARVWLGTFDTAEAAARAYDEAALRFRGNKAKLN 131

Query: 65  FPERVQANPAEFGFLPSTGGAAAAPA 91
           FPE V+  P     L S     A  A
Sbjct: 132 FPEDVRILPPPPPLLRSPADTVANKA 157

[Close]
BLAST of Carg11559 vs. TAIR 10
Match: AT2G33710.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 112.8 bits (281), Expect = 2.7e-25
Identity = 67/141 (47.52%), Postives = 80/141 (56.74%), Query Frame = 0 

Query: 6   RKIHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEAAAIAYDNAALRFKGTKAKLNF 65
           R+ +YRGVRQRPWGKWAAEIRDP KAARVWLGTFDTAE AA+AYD AA  F+G KAKLNF
Sbjct: 66  RQRNYRGVRQRPWGKWAAEIRDPNKAARVWLGTFDTAEEAALAYDKAAFEFRGHKAKLNF 125

Query: 66  PERVQANPA-------------------------------EFGFLPSTGGAAAAPATVAS 116
           PE ++ NP                                ++G   S    ++A  ++  
Sbjct: 126 PEHIRVNPTQLYPSPATSHDRIIVTPPSPPPPIAPDILLDQYGHFQSRSSDSSANLSMNM 185

The following BLAST results are available for this feature:
BLAST of Carg11559 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7014616.14.1e-92100.00Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp.... [more]
KAG6576097.12.7e-9199.43Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp.... [more]
XP_023548873.17.6e-8695.45ethylene-responsive transcription factor ERF113-like [Cucurbita pepo subsp. pepo... [more]
XP_022953884.11.7e-8597.11ethylene-responsive transcription factor ERF113-like [Cucurbita moschata][more]
XP_022991755.17.1e-8494.83ethylene-responsive transcription factor ERF113-like, partial [Cucurbita maxima][more]
BLAST of Carg11559 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9LYU34.7e-3054.04Ethylene-responsive transcription factor ERF113 OS=Arabidopsis thaliana OX=3702 ... [more]
Q9LY292.0e-2889.23Ethylene-responsive transcription factor ERF115 OS=Arabidopsis thaliana OX=3702 ... [more]
Q9FH545.7e-2887.69Ethylene-responsive transcription factor ERF114 OS=Arabidopsis thaliana OX=3702 ... [more]
Q70II37.7e-2569.77Ethylene-responsive transcription factor ERF110 OS=Arabidopsis thaliana OX=3702 ... [more]
Q7G1L22.9e-2483.08Ethylene-responsive transcription factor RAP2-6 OS=Arabidopsis thaliana OX=3702 ... [more]
BLAST of Carg11559 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1GR638.1e-8697.11ethylene-responsive transcription factor ERF113-like OS=Cucurbita moschata OX=36... [more]
A0A6J1JTV13.4e-8494.83ethylene-responsive transcription factor ERF113-like OS=Cucurbita maxima OX=3661... [more]
A0A6J1KRN42.6e-6071.04ethylene-responsive transcription factor ERF113-like OS=Cucurbita maxima OX=3661... [more]
A0A0A0K9G51.0e-5974.18AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G091830 PE=... [more]
A0A5D3DLW85.0e-5973.63Ethylene-responsive transcription factor ERF113-like protein OS=Cucumis melo var... [more]
BLAST of Carg11559 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G13330.13.3e-3154.04related to AP2 6l [more]
AT5G07310.11.4e-2989.23Integrase-type DNA-binding superfamily protein [more]
AT5G61890.14.1e-2987.69Integrase-type DNA-binding superfamily protein [more]
AT5G50080.15.5e-2669.77ethylene response factor 110 [more]
AT2G33710.12.7e-2547.52Integrase-type DNA-binding superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001471AP2/ERF domainPRINTSPR00367ETHRSPELEMNTcoord: 32..48
score: 70.37
coord: 10..21
score: 76.67
IPR001471AP2/ERF domainSMARTSM00380rav1_2coord: 9..72
e-value: 3.5E-38
score: 142.8
IPR001471AP2/ERF domainPFAMPF00847AP2coord: 9..58
e-value: 2.8E-14
score: 53.1
IPR001471AP2/ERF domainPROSITEPS51032AP2_ERFcoord: 9..66
score: 24.882088
IPR001471AP2/ERF domainCDDcd00018AP2coord: 9..67
e-value: 2.29005E-24
score: 88.0975
IPR036955AP2/ERF domain superfamilyGENE3D3.30.730.10AP2/ERF domaincoord: 8..68
e-value: 2.4E-28
score: 100.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 145..176
NoneNo IPR availablePANTHERPTHR31190:SF208SUBFAMILY NOT NAMEDcoord: 5..147
IPR044808Ethylene-responsive transcription factorPANTHERPTHR31190DNA-BINDING DOMAINcoord: 5..147
IPR016177DNA-binding domain superfamilySUPERFAMILY54171DNA-binding domaincoord: 9..67

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg11559-RACarg11559-RAmRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000724 double-strand break repair via homologous recombination
biological_process GO:0009873 ethylene-activated signaling pathway
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005634 nucleus
cellular_component GO:0097196 Shu complex
molecular_function GO:0003700 DNA-binding transcription factor activity
molecular_function GO:0003697 single-stranded DNA binding
molecular_function GO:0003677 DNA binding