Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATTTAGTACGGCACCATCGATTACATCCGCTCCTTATAATCGTTCCTACTTGTGCAAATATCAAAGACAAAAACGACGTTCCTACAAAACAGGCCGGTGAAGGTAAGCTAAACACTTTGATATTATTTTAGGGTTTGAGATTTGTGTCTATTTGATGTTACGAATTTATAAACAAAATGGTTTAGATGATAAGGAAAGTGGAGAGAAGGGTTCAAACAGCTCGCCGGACGTGCGGCCTAAATCATCAAAACACCGGTCGTCAAGTGAGTCTCCAACCAGCCATGAAAGATCAGAGAGACACAAAGCAAGACGGTCTTCCAAGTCAAAGGAGAGCTCCGACAAAAAACAAAGCAGCCGAGGAGGGGAGGAGCAGAATGAGTCGCCCAACTCGAGCCTCCCAGACATCCCAAGACACGGGCGGCGGAAGAAAACGAGCAGATCCAAGCCCCATGCTGCGGATACATACAAGTCCTCGCATTCGGATCCTGGTCCCAACTCTGGAACGGAATCCATATCTGTATCCCTGGAAACCACCATGTGTCAGACACCTTAG
mRNA sequence
ATGAATTTAGTACGGCACCATCGATTACATCCGCTCCTTATAATCGTTCCTACTTGTGCAAATATCAAAGACAAAAACGACGTTCCTACAAAACAGGCCGGTGAAGATGATAAGGAAAGTGGAGAGAAGGGTTCAAACAGCTCGCCGGACGTGCGGCCTAAATCATCAAAACACCGGTCGTCAAGTGAGTCTCCAACCAGCCATGAAAGATCAGAGAGACACAAAGCAAGACGGTCTTCCAAGTCAAAGGAGAGCTCCGACAAAAAACAAAGCAGCCGAGGAGGGGAGGAGCAGAATGAGTCGCCCAACTCGAGCCTCCCAGACATCCCAAGACACGGGCGGCGGAAGAAAACGAGCAGATCCAAGCCCCATGCTGCGGATACATACAAGTCCTCGCATTCGGATCCTGGTCCCAACTCTGGAACGGAATCCATATCTGTATCCCTGGAAACCACCATGTGTCAGACACCTTAG
Coding sequence (CDS)
ATGAATTTAGTACGGCACCATCGATTACATCCGCTCCTTATAATCGTTCCTACTTGTGCAAATATCAAAGACAAAAACGACGTTCCTACAAAACAGGCCGGTGAAGATGATAAGGAAAGTGGAGAGAAGGGTTCAAACAGCTCGCCGGACGTGCGGCCTAAATCATCAAAACACCGGTCGTCAAGTGAGTCTCCAACCAGCCATGAAAGATCAGAGAGACACAAAGCAAGACGGTCTTCCAAGTCAAAGGAGAGCTCCGACAAAAAACAAAGCAGCCGAGGAGGGGAGGAGCAGAATGAGTCGCCCAACTCGAGCCTCCCAGACATCCCAAGACACGGGCGGCGGAAGAAAACGAGCAGATCCAAGCCCCATGCTGCGGATACATACAAGTCCTCGCATTCGGATCCTGGTCCCAACTCTGGAACGGAATCCATATCTGTATCCCTGGAAACCACCATGTGTCAGACACCTTAG
Protein sequence
MNLVRHHRLHPLLIIVPTCANIKDKNDVPTKQAGEDDKESGEKGSNSSPDVRPKSSKHRSSSESPTSHERSERHKARRSSKSKESSDKKQSSRGGEEQNESPNSSLPDIPRHGRRKKTSRSKPHAADTYKSSHSDPGPNSGTESISVSLETTMCQTP
Homology
BLAST of Carg11549 vs. NCBI nr
Match:
KAG7014607.1 (hypothetical protein SDJN02_24786, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 287.0 bits (733), Expect = 1.0e-73
Identity = 157/157 (100.00%), Postives = 157/157 (100.00%), Query Frame = 0
Query: 1 MNLVRHHRLHPLLIIVPTCANIKDKNDVPTKQAGEDDKESGEKGSNSSPDVRPKSSKHRS 60
MNLVRHHRLHPLLIIVPTCANIKDKNDVPTKQAGEDDKESGEKGSNSSPDVRPKSSKHRS
Sbjct: 1 MNLVRHHRLHPLLIIVPTCANIKDKNDVPTKQAGEDDKESGEKGSNSSPDVRPKSSKHRS 60
Query: 61 SSESPTSHERSERHKARRSSKSKESSDKKQSSRGGEEQNESPNSSLPDIPRHGRRKKTSR 120
SSESPTSHERSERHKARRSSKSKESSDKKQSSRGGEEQNESPNSSLPDIPRHGRRKKTSR
Sbjct: 61 SSESPTSHERSERHKARRSSKSKESSDKKQSSRGGEEQNESPNSSLPDIPRHGRRKKTSR 120
Query: 121 SKPHAADTYKSSHSDPGPNSGTESISVSLETTMCQTP 158
SKPHAADTYKSSHSDPGPNSGTESISVSLETTMCQTP
Sbjct: 121 SKPHAADTYKSSHSDPGPNSGTESISVSLETTMCQTP 157
BLAST of Carg11549 vs. NCBI nr
Match:
XP_022953885.1 (CRIB domain-containing protein RIC6-like [Cucurbita moschata])
HSP 1 Score: 243.4 bits (620), Expect = 1.3e-60
Identity = 137/140 (97.86%), Postives = 137/140 (97.86%), Query Frame = 0
Query: 18 TCANIKDKNDVPTKQAGEDDKESGEKGSNSSPDVRPKSSKHRSSSESPTSHERSERHKAR 77
T ANIKDKNDV TKQAGEDDKESGEKGSNSSPDVRPKSSKHRSSSESPTSHERSERHKAR
Sbjct: 73 TRANIKDKNDVSTKQAGEDDKESGEKGSNSSPDVRPKSSKHRSSSESPTSHERSERHKAR 132
Query: 78 RSSKSKESSDKKQSSRGGEEQNESPNSSLPDIPRHGRRKKTSRSKPHAADTYKSSHSDPG 137
RSSKSKESSDKKQSSRGGEEQNESPNSSLPDIPRHGRRKKTSRSKPHAAD YKSSHSDPG
Sbjct: 133 RSSKSKESSDKKQSSRGGEEQNESPNSSLPDIPRHGRRKKTSRSKPHAADAYKSSHSDPG 192
Query: 138 PNSGTESISVSLETTMCQTP 158
PNSGTESISVSLETTMCQTP
Sbjct: 193 PNSGTESISVSLETTMCQTP 212
BLAST of Carg11549 vs. NCBI nr
Match:
KAG6576091.1 (Glutathione gamma-glutamylcysteinyltransferase 1, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 231.1 bits (588), Expect = 6.6e-57
Identity = 129/129 (100.00%), Postives = 129/129 (100.00%), Query Frame = 0
Query: 18 TCANIKDKNDVPTKQAGEDDKESGEKGSNSSPDVRPKSSKHRSSSESPTSHERSERHKAR 77
TCANIKDKNDVPTKQAGEDDKESGEKGSNSSPDVRPKSSKHRSSSESPTSHERSERHKAR
Sbjct: 46 TCANIKDKNDVPTKQAGEDDKESGEKGSNSSPDVRPKSSKHRSSSESPTSHERSERHKAR 105
Query: 78 RSSKSKESSDKKQSSRGGEEQNESPNSSLPDIPRHGRRKKTSRSKPHAADTYKSSHSDPG 137
RSSKSKESSDKKQSSRGGEEQNESPNSSLPDIPRHGRRKKTSRSKPHAADTYKSSHSDPG
Sbjct: 106 RSSKSKESSDKKQSSRGGEEQNESPNSSLPDIPRHGRRKKTSRSKPHAADTYKSSHSDPG 165
Query: 138 PNSGTESIS 147
PNSGTESIS
Sbjct: 166 PNSGTESIS 174
BLAST of Carg11549 vs. NCBI nr
Match:
XP_022991756.1 (CRIB domain-containing protein RIC6-like [Cucurbita maxima])
HSP 1 Score: 225.7 bits (574), Expect = 2.8e-55
Identity = 129/140 (92.14%), Postives = 131/140 (93.57%), Query Frame = 0
Query: 18 TCANIKDKNDVPTKQAGEDDKESGEKGSNSSPDVRPKSSKHRSSSESPTSHERSERHKAR 77
T ANIKDK+DV TKQA ED+ ESGEKGSN SPDVRPKSSKHRSSSESPTS ERSERHKAR
Sbjct: 46 TRANIKDKDDVSTKQASEDESESGEKGSNRSPDVRPKSSKHRSSSESPTSQERSERHKAR 105
Query: 78 RSSKSKESSDKKQSSRGGEEQNESPNSSLPDIPRHGRRKKTSRSKPHAADTYKSSHSDPG 137
RSSKSKESSDKKQSS GGE QNESPNSSLPDIPRHGRRKKTSRSKPHAADTYKSSHSDPG
Sbjct: 106 RSSKSKESSDKKQSSPGGEAQNESPNSSLPDIPRHGRRKKTSRSKPHAADTYKSSHSDPG 165
Query: 138 PNSGTESISVSLETTMCQTP 158
PNSGTESISVSLE TMCQTP
Sbjct: 166 PNSGTESISVSLEATMCQTP 185
BLAST of Carg11549 vs. NCBI nr
Match:
XP_023549435.1 (CRIB domain-containing protein RIC6-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 224.2 bits (570), Expect = 8.0e-55
Identity = 128/141 (90.78%), Postives = 133/141 (94.33%), Query Frame = 0
Query: 17 PTCANIKDKNDVPTKQAGEDDKESGEKGSNSSPDVRPKSSKHRSSSESPTSHERSERHKA 76
PT AN KDK++ TKQAGED+ ESGEKGSNSSPDVRPKSSKHRSSSES TS ERSERHKA
Sbjct: 69 PTRANSKDKDNDSTKQAGEDESESGEKGSNSSPDVRPKSSKHRSSSESLTSQERSERHKA 128
Query: 77 RRSSKSKESSDKKQSSRGGEEQNESPNSSLPDIPRHGRRKKTSRSKPHAADTYKSSHSDP 136
RRSSKSKESSDKKQSSRGGEEQNESPNSSLPDIPRHGRRKKTS+SKPHAADTYKSSHSDP
Sbjct: 129 RRSSKSKESSDKKQSSRGGEEQNESPNSSLPDIPRHGRRKKTSKSKPHAADTYKSSHSDP 188
Query: 137 GPNSGTESISVSLETTMCQTP 158
GPN+GTESI VSLETTMCQTP
Sbjct: 189 GPNTGTESICVSLETTMCQTP 209
BLAST of Carg11549 vs. ExPASy TrEMBL
Match:
A0A6J1GQW7 (CRIB domain-containing protein RIC6-like OS=Cucurbita moschata OX=3662 GN=LOC111456289 PE=4 SV=1)
HSP 1 Score: 243.4 bits (620), Expect = 6.2e-61
Identity = 137/140 (97.86%), Postives = 137/140 (97.86%), Query Frame = 0
Query: 18 TCANIKDKNDVPTKQAGEDDKESGEKGSNSSPDVRPKSSKHRSSSESPTSHERSERHKAR 77
T ANIKDKNDV TKQAGEDDKESGEKGSNSSPDVRPKSSKHRSSSESPTSHERSERHKAR
Sbjct: 73 TRANIKDKNDVSTKQAGEDDKESGEKGSNSSPDVRPKSSKHRSSSESPTSHERSERHKAR 132
Query: 78 RSSKSKESSDKKQSSRGGEEQNESPNSSLPDIPRHGRRKKTSRSKPHAADTYKSSHSDPG 137
RSSKSKESSDKKQSSRGGEEQNESPNSSLPDIPRHGRRKKTSRSKPHAAD YKSSHSDPG
Sbjct: 133 RSSKSKESSDKKQSSRGGEEQNESPNSSLPDIPRHGRRKKTSRSKPHAADAYKSSHSDPG 192
Query: 138 PNSGTESISVSLETTMCQTP 158
PNSGTESISVSLETTMCQTP
Sbjct: 193 PNSGTESISVSLETTMCQTP 212
BLAST of Carg11549 vs. ExPASy TrEMBL
Match:
A0A6J1JRN8 (CRIB domain-containing protein RIC6-like OS=Cucurbita maxima OX=3661 GN=LOC111488288 PE=4 SV=1)
HSP 1 Score: 225.7 bits (574), Expect = 1.3e-55
Identity = 129/140 (92.14%), Postives = 131/140 (93.57%), Query Frame = 0
Query: 18 TCANIKDKNDVPTKQAGEDDKESGEKGSNSSPDVRPKSSKHRSSSESPTSHERSERHKAR 77
T ANIKDK+DV TKQA ED+ ESGEKGSN SPDVRPKSSKHRSSSESPTS ERSERHKAR
Sbjct: 46 TRANIKDKDDVSTKQASEDESESGEKGSNRSPDVRPKSSKHRSSSESPTSQERSERHKAR 105
Query: 78 RSSKSKESSDKKQSSRGGEEQNESPNSSLPDIPRHGRRKKTSRSKPHAADTYKSSHSDPG 137
RSSKSKESSDKKQSS GGE QNESPNSSLPDIPRHGRRKKTSRSKPHAADTYKSSHSDPG
Sbjct: 106 RSSKSKESSDKKQSSPGGEAQNESPNSSLPDIPRHGRRKKTSRSKPHAADTYKSSHSDPG 165
Query: 138 PNSGTESISVSLETTMCQTP 158
PNSGTESISVSLE TMCQTP
Sbjct: 166 PNSGTESISVSLEATMCQTP 185
BLAST of Carg11549 vs. ExPASy TrEMBL
Match:
A0A0A0KF43 (CRIB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G088140 PE=4 SV=1)
HSP 1 Score: 85.5 bits (210), Expect = 2.2e-13
Identity = 75/149 (50.34%), Postives = 87/149 (58.39%), Query Frame = 0
Query: 24 DKNDVPTKQAGED------DKESGEKGSNSSPDVRPKSSKHRSSS-------ESPTSHER 83
+K DV K ED K S N + DV K+SKH SSS ESPT ER
Sbjct: 50 NKEDVSVKWVSEDRPSRRVAKGSSSSAKNLTADV-TKTSKHPSSSSTTSSSTESPTCRER 109
Query: 84 -SERHKARRSSKSKESSDKKQSSRGGEEQNESPNSSLPDIPRHGRRKKTSRSKPH-AADT 143
SER K RRSSKSKE SS N SP SLPD+PR RRKKT+R+KPH A +T
Sbjct: 110 SSERQKTRRSSKSKE-----PSSSDNNNNNHSPTLSLPDVPRQTRRKKTTRTKPHLAPET 169
Query: 144 YKSSHSDPGPNSGTESISVSLETTMCQTP 158
YKS HSDPG + T SIS+S ++ +CQTP
Sbjct: 170 YKSPHSDPGSTTATGSISLSKDSDLCQTP 192
BLAST of Carg11549 vs. ExPASy TrEMBL
Match:
A0A5A7T9D8 (CRIB domain-containing protein RIC6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G001680 PE=4 SV=1)
HSP 1 Score: 84.7 bits (208), Expect = 3.7e-13
Identity = 77/152 (50.66%), Postives = 92/152 (60.53%), Query Frame = 0
Query: 24 DKNDVPTKQAGEDDKESGEKGSNSS-------PDVRPKSSKHRSSS-------ESPTSHE 83
+K DV K ED EKG +SS DV K+SKH SSS +SPT E
Sbjct: 50 NKEDVSVKGVSEDRSRRVEKGRSSSSAKNLTADDVVTKTSKHPSSSSTTSSSTDSPTCRE 109
Query: 84 R-SERHKARRSSKSKESSDKKQSSRGGEEQNESPNSSLPDIPRHG-RRKKTSRSKPH-AA 143
R SER K RRSSKSKES SS N SP SLPD+PR RRKKT+R+KPH A
Sbjct: 110 RSSERQKTRRSSKSKES-----SSSSDNNNNHSPTLSLPDVPRQNPRRKKTTRTKPHLAP 169
Query: 144 DTYKSSHSDPGPN-SGTESISVSLETTMCQTP 158
+TYKS +SDPG + + T+SIS+S +T +CQTP
Sbjct: 170 ETYKSPYSDPGASTTATDSISLSKDTDLCQTP 196
BLAST of Carg11549 vs. ExPASy TrEMBL
Match:
A0A1S3CD78 (CRIB domain-containing protein RIC6-like OS=Cucumis melo OX=3656 GN=LOC103499079 PE=4 SV=1)
HSP 1 Score: 84.7 bits (208), Expect = 3.7e-13
Identity = 77/152 (50.66%), Postives = 92/152 (60.53%), Query Frame = 0
Query: 24 DKNDVPTKQAGEDDKESGEKGSNSS-------PDVRPKSSKHRSSS-------ESPTSHE 83
+K DV K ED EKG +SS DV K+SKH SSS +SPT E
Sbjct: 50 NKEDVSVKGVSEDRSRRVEKGRSSSSAKNLTADDVVTKTSKHPSSSSTTPSSTDSPTCRE 109
Query: 84 R-SERHKARRSSKSKESSDKKQSSRGGEEQNESPNSSLPDIPRHG-RRKKTSRSKPH-AA 143
R SER K RRSSKSKES SS N SP SLPD+PR RRKKT+R+KPH A
Sbjct: 110 RSSERQKTRRSSKSKES-----SSSSDNNNNHSPTLSLPDVPRQNPRRKKTTRTKPHLAP 169
Query: 144 DTYKSSHSDPGPN-SGTESISVSLETTMCQTP 158
+TYKS +SDPG + + T+SIS+S +T +CQTP
Sbjct: 170 ETYKSPYSDPGASTTATDSISLSKDTDLCQTP 196
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAG7014607.1 | 1.0e-73 | 100.00 | hypothetical protein SDJN02_24786, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
XP_022953885.1 | 1.3e-60 | 97.86 | CRIB domain-containing protein RIC6-like [Cucurbita moschata] | [more] |
KAG6576091.1 | 6.6e-57 | 100.00 | Glutathione gamma-glutamylcysteinyltransferase 1, partial [Cucurbita argyrosperm... | [more] |
XP_022991756.1 | 2.8e-55 | 92.14 | CRIB domain-containing protein RIC6-like [Cucurbita maxima] | [more] |
XP_023549435.1 | 8.0e-55 | 90.78 | CRIB domain-containing protein RIC6-like [Cucurbita pepo subsp. pepo] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1GQW7 | 6.2e-61 | 97.86 | CRIB domain-containing protein RIC6-like OS=Cucurbita moschata OX=3662 GN=LOC111... | [more] |
A0A6J1JRN8 | 1.3e-55 | 92.14 | CRIB domain-containing protein RIC6-like OS=Cucurbita maxima OX=3661 GN=LOC11148... | [more] |
A0A0A0KF43 | 2.2e-13 | 50.34 | CRIB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G088140 PE=4 S... | [more] |
A0A5A7T9D8 | 3.7e-13 | 50.66 | CRIB domain-containing protein RIC6-like OS=Cucumis melo var. makuwa OX=1194695 ... | [more] |
A0A1S3CD78 | 3.7e-13 | 50.66 | CRIB domain-containing protein RIC6-like OS=Cucumis melo OX=3656 GN=LOC103499079... | [more] |
Match Name | E-value | Identity | Description | |