Carg11529 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg11529
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	glutaredoxin-C5, chloroplastic-like
Location	Carg_Chr17: 9539474 .. 9542819 (-)
RNA-Seq Expression	Carg11529
Synteny	Carg11529

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAGTTCCTTCCAATTTCACCTCTCCTCCTCTAACTTCTCATCGCACTCTTTCCTTCTTCTTCAAAGCTTCTGTTTTATCCCTTCCCTTTTACAACGCCTGCGCTTCCAAATCCATTTCCATCTCAACAAAACACAATGGATCCACGAGGATCAGACCTATGTCGATTAGAGCTGTCTCCTCCTCCTCTTCTTCTTCTTCTTCCTTTGGTTCTAGACTCGAGGAGAGTGTCAAAACTACAATTACTCAGAATCCTGTTGTTGTTTACTCCAAGACATGGTGTTCGTGAGTTCAAATCTCATCCATCTCATCTTTATATTTGTAATGCTTTTTTTCGATTTCCTTCGTGTTCTCTTTCCTTTTCCAGATTTGGGTTTCTTGAGTTTATTGGAAATATTTTGAAGCCGGATCGTTCGTTGGTAATCTCTTTTTTTAAGGTATTCTTCTGAGGTTAAGGCGTTGTTCAAGAGGCTTGGAGCGCAGCCATTGGTCATTGAATTGGATGAATTAGGTACTTTTTCTTCTATTCTTATTACACTTGCTGGTAGATTTGCTCGAGGGGATCTGAGTACTGAAATCACTTTTTATTTTTCCCTCTATGACGATAACTGCCATTCCTGTCATATGTTCTTACTATTAACTTAAATTTTTGGATTAAGTTGTAAGTTAATTGTCGAGGATGGTTGGGAGAGAAGTCCTACGTTGGCTAACCAAAGGGAAGATCATGGGTTAGTAAGGAATACTATCTTCATTGGTACGAGATTCGTGGTTCCTGACATGGTATCATAGCATGCCCTTAACTTAGACATGTCAATAGAATCCTCAAGTTTCGACCAAAGAAGTTGTGAGCCTCGAAGGTGTAGTCAAAAGTGACTCAAGTATTGAACAAAGGGCGTACTTTGTTTCGAGGGCTCCAAAGAACGAGTCGAGCCTCGATGAAGGGGAGATTGTTTGGGGGCTATTGTTCGAGGGGAGGATTGTTGGGAGAGGAGTCCCACATTGACTAATTAAGGGGAAGATCATGAGTTTATAAGTAAGAAATACTAACTTCATTGGCATGAGGCCTTTTGGAAAAACCAAAAGCAAATCCATGAGAGCTTATGCTCAAAGTGGACAATATCATATCATTGTGAAAATTAGTGGTTCCTAACATTAATTTGATCTCAGACCTAGAGATACTCAATTTAAGCCGAATTCGACCCTTGTATGTTACTTTCTTCTGAAGTGATGATGTTAATAGTTCATGTGTTGGTTTGTATGAATCAAATTGATATCCTTGAGCTATTTGCTTTGATTTAAACCATCATGAGTCTTTCATTGAATTTAATGTCTTCTCTTGAATCTGTTTATGCATCTTGTAAGCTGACAAGTATTTTCCCTTCAGGTCCCCAAGGGCCACAACTGCAAAAGGTACTTGAGAGGCTTACAGGACAACATACGGTACCAAATGTTTTCATCGGTTAGTATTGCTTAATCACAATTATCAATCTTATGTATGTTGAAAATATTATCATTTTATGTTTACGTGGTTCTCTGTTTTAGTTATAAAACTTGCTGCTTTCACATTTTCATCGATTAACATTTGATACGTACAAAAACATTGCTTCTAATAGTGATTTTGTGTCGAATCTTCATTGAATACCTTTACTTATGATCCCGAACGTACCCCTTGGTTTGATATAACCATCTAGAAATAATAATGGTTGTCTATATGCTGAGAACCGAAGCATATATAGGGGTTTAGTTTTGGATTTTCGGTCTCAGTAAATAAGTAGAGCACAACGTGTTAGACCCTCGATCCGGGGACACGTGACTTGGCTCCATGTGTCTTACATGAGTCAAGATCTGATCATGTATGGGGTGGCACACTCAAAAGGATGGGTCCAAGGAAGGTGGCAACATTTACGCGTAGTAGGTGGTTGTCACTCTGACAATTGCACGAATGAATGCTGCTTGTTAAGAGACAAAGACACTTTAGTTTGAGTATTGTGTCTATGTCCATATCCATGCTTCTTAGTTTGTGTATACATACTTTGTTCTTAGACTGGAAGCAAGTGATTTTATATACAAGTTTGAAAATGGGATAGGAAGATCCTTTTTCCAACCTTTACTCATATTTTTTCGTGTTTATGAATGGATTGCTCGTACAATCCACAAGCATGCTTACTAATAGGGGAAGCGCCTCAGCTTCACATCATCCTCGCTATATATTTGTGAAGAACCTCAATGAACTAACTACTCACTGCTCGAGCTTACGTTAGTCGTAGAAACCGCTCACTACTATGTGCTAAGTTTCTTCCTTCCCTCCATGTCTTTCTTGTTTTAGGAGACGCTGGAGGTTTTTTGACCCACCACTGATTTAAACCACAAAACTCTAGCTTTGCCTGTAGAAAAGTTCCATGGATGAGTTGAAAATGCCTCGGACACCTCTTAGCGAACACCAAGTCTCTTTGTTTTAAATAGGTTATCCTGTATCAGCCGATCAATCAACAAAGATTTGAACAATGACTGACTCGTTTTTTAGCCTACGAAAGGAAATTTTATTAGAACATATAACAAATGCATGTACTATCCACGTAGATAGAAATCCCCCCTCCCCCCCCCCCCCCCCCGTGTTTAAAAATACTGCCCCTTTGTGTTGTTTCGAATAACGACTACCGTTCTATTTCATGGAGTCTCGTCATCTAAAGATTTTTCCCCAAATCATATTCTTGTGCGCGTACCGAGTATTGTTTAAATTCACATACCTCTTTCTGTGGCCAGGGGGCAAGCACATAGGCGGTTGTACAGGTACTTTTTTTTTTTTTTTTACCAAGATTTCATTCAATGGAAACATACATTGCTTGATTCACTTATATTGATTATCGATGTCGCTTGTGCTCGCCGTGATGATGCAGATACTGTGAAACTATACCGAAAAGGAGAGCTCGAGCCTTTGCTATCTGAAGCGAATGCTAAAAATACAGAGACATAAGGCACTAGGCACATTTTGTTTTCTTAGCCATTTGGTGACTGACCTGTTGATTTTCTTAATTCTACCTCGAGTGATACTTGCGTTTCTTGTTAGGAACATGTATTTTAAGATATTTGTGGATGCATTTGTTTCAAGGAAGGATCTCCAGTTTATGCATGAAATAAGAGAGCATTTTATTCCCATTTGGAAAGAAAAGCCTTCCATTTCCGTCAAATGACCTGGCCTCCCTTGCCCGGTTTACGGTCCAGGCTCTCTTTCCTGTCTATGCTATGCTCCTATGGCGCAGGCTTACCACGTTCCGCGCCTGCAACGTTTTTGCCTGGTTTACCGTCCAAGCTCCCCTTCCCGTCTATGCTATGCTCCTATGGCG

mRNA sequence

ATGGCAGTTCCTTCCAATTTCACCTCTCCTCCTCTAACTTCTCATCGCACTCTTTCCTTCTTCTTCAAAGCTTCTGTTTTATCCCTTCCCTTTTACAACGCCTGCGCTTCCAAATCCATTTCCATCTCAACAAAACACAATGGATCCACGAGGATCAGACCTATGTCGATTAGAGCTGTCTCCTCCTCCTCTTCTTCTTCTTCTTCCTTTGGTTCTAGACTCGAGGAGAGTGTCAAAACTACAATTACTCAGAATCCTGTTGTTGTTTACTCCAAGACATGGTGTTCGTATTCTTCTGAGGTTAAGGCGTTGTTCAAGAGGCTTGGAGCGCAGCCATTGGTCATTGAATTGGATGAATTAGGTCCCCAAGGGCCACAACTGCAAAAGGTACTTGAGAGGCTTACAGGACAACATACGGTACCAAATGTTTTCATCGGGGGCAAGCACATAGGCGGTTGTACAGATACTGTGAAACTATACCGAAAAGGAGAGCTCGAGCCTTTGCTATCTGAAGCGAATGCTAAAAATACAGAGACATAAGGCACTAGGCACATTTTGTTTTCTTAGCCATTTGGTGACTGACCTGTTGATTTTCTTAATTCTACCTCGAGTGATACTTGCGTTTCTTGTTAGGAACATGTATTTTAAGATATTTGTGGATGCATTTGTTTCAAGGAAGGATCTCCAGTTTATGCATGAAATAAGAGAGCATTTTATTCCCATTTGGAAAGAAAAGCCTTCCATTTCCGTCAAATGACCTGGCCTCCCTTGCCCGGTTTACGGTCCAGGCTCTCTTTCCTGTCTATGCTATGCTCCTATGGCGCAGGCTTACCACGTTCCGCGCCTGCAACGTTTTTGCCTGGTTTACCGTCCAAGCTCCCCTTCCCGTCTATGCTATGCTCCTATGGCG

Coding sequence (CDS)

ATGGCAGTTCCTTCCAATTTCACCTCTCCTCCTCTAACTTCTCATCGCACTCTTTCCTTCTTCTTCAAAGCTTCTGTTTTATCCCTTCCCTTTTACAACGCCTGCGCTTCCAAATCCATTTCCATCTCAACAAAACACAATGGATCCACGAGGATCAGACCTATGTCGATTAGAGCTGTCTCCTCCTCCTCTTCTTCTTCTTCTTCCTTTGGTTCTAGACTCGAGGAGAGTGTCAAAACTACAATTACTCAGAATCCTGTTGTTGTTTACTCCAAGACATGGTGTTCGTATTCTTCTGAGGTTAAGGCGTTGTTCAAGAGGCTTGGAGCGCAGCCATTGGTCATTGAATTGGATGAATTAGGTCCCCAAGGGCCACAACTGCAAAAGGTACTTGAGAGGCTTACAGGACAACATACGGTACCAAATGTTTTCATCGGGGGCAAGCACATAGGCGGTTGTACAGATACTGTGAAACTATACCGAAAAGGAGAGCTCGAGCCTTTGCTATCTGAAGCGAATGCTAAAAATACAGAGACATAA

Protein sequence

MAVPSNFTSPPLTSHRTLSFFFKASVLSLPFYNACASKSISISTKHNGSTRIRPMSIRAVSSSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCSYSSEVKALFKRLGAQPLVIELDELGPQGPQLQKVLERLTGQHTVPNVFIGGKHIGGCTDTVKLYRKGELEPLLSEANAKNTET

Homology

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BLAST of Carg11529 vs. NCBI nr
Match: KAG6576070.1 (Glutaredoxin-C5, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] >KAG7014587.1 Glutaredoxin-C5, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 347.8 bits (891), Expect = 5.5e-92
Identity = 179/179 (100.00%), Postives = 179/179 (100.00%), Query Frame = 0


Query: 1   MAVPSNFTSPPLTSHRTLSFFFKASVLSLPFYNACASKSISISTKHNGSTRIRPMSIRAV 60
           MAVPSNFTSPPLTSHRTLSFFFKASVLSLPFYNACASKSISISTKHNGSTRIRPMSIRAV
Sbjct: 1   MAVPSNFTSPPLTSHRTLSFFFKASVLSLPFYNACASKSISISTKHNGSTRIRPMSIRAV 60

Query: 61  SSSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCSYSSEVKALFKRLGAQPLVIELDEL 120
           SSSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCSYSSEVKALFKRLGAQPLVIELDEL
Sbjct: 61  SSSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCSYSSEVKALFKRLGAQPLVIELDEL 120

Query: 121 GPQGPQLQKVLERLTGQHTVPNVFIGGKHIGGCTDTVKLYRKGELEPLLSEANAKNTET 180
           GPQGPQLQKVLERLTGQHTVPNVFIGGKHIGGCTDTVKLYRKGELEPLLSEANAKNTET
Sbjct: 121 GPQGPQLQKVLERLTGQHTVPNVFIGGKHIGGCTDTVKLYRKGELEPLLSEANAKNTET 179

[Close]

BLAST of Carg11529 vs. NCBI nr
Match: XP_022954295.1 (glutaredoxin-C5, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 343.2 bits (879), Expect = 1.4e-90
Identity = 179/180 (99.44%), Postives = 179/180 (99.44%), Query Frame = 0


Query: 1   MAVPSNFTSPPLTSHRTLSFFFKASVLSLPFYNACASKSISISTKHNGSTRIRPMSIRAV 60
           MAVPSNFTSPPLTSHRTLSFFFKASVLSLPFYNACASKSISISTKHNGSTRIRPMSIRAV
Sbjct: 1   MAVPSNFTSPPLTSHRTLSFFFKASVLSLPFYNACASKSISISTKHNGSTRIRPMSIRAV 60

Query: 61  -SSSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCSYSSEVKALFKRLGAQPLVIELDE 120
            SSSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCSYSSEVKALFKRLGAQPLVIELDE
Sbjct: 61  SSSSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCSYSSEVKALFKRLGAQPLVIELDE 120

Query: 121 LGPQGPQLQKVLERLTGQHTVPNVFIGGKHIGGCTDTVKLYRKGELEPLLSEANAKNTET 180
           LGPQGPQLQKVLERLTGQHTVPNVFIGGKHIGGCTDTVKLYRKGELEPLLSEANAKNTET
Sbjct: 121 LGPQGPQLQKVLERLTGQHTVPNVFIGGKHIGGCTDTVKLYRKGELEPLLSEANAKNTET 180

[Close]

BLAST of Carg11529 vs. NCBI nr
Match: XP_023549357.1 (glutaredoxin-C5, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 335.9 bits (860), Expect = 2.2e-88
Identity = 178/183 (97.27%), Postives = 178/183 (97.27%), Query Frame = 0


Query: 1   MAVPSNFTSPPLTSHRTLSFFFKASVLSLPFYNACASKSISISTKH----NGSTRIRPMS 60
           MAVPSNFTSPPLTSHRTLSFFFKASVLSLPFYNACASKSISIS KH    NGSTRIRPMS
Sbjct: 1   MAVPSNFTSPPLTSHRTLSFFFKASVLSLPFYNACASKSISIS-KHNALNNGSTRIRPMS 60

Query: 61  IRAVSSSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCSYSSEVKALFKRLGAQPLVIE 120
           IRAVSSSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCSYSSEVKALFKRLGAQPLVIE
Sbjct: 61  IRAVSSSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCSYSSEVKALFKRLGAQPLVIE 120

Query: 121 LDELGPQGPQLQKVLERLTGQHTVPNVFIGGKHIGGCTDTVKLYRKGELEPLLSEANAKN 180
           LDELGPQGPQLQKVLERLTGQHTVPNVFIGGKHIGGCTDTVKLYRKGELEPLLSEANAKN
Sbjct: 121 LDELGPQGPQLQKVLERLTGQHTVPNVFIGGKHIGGCTDTVKLYRKGELEPLLSEANAKN 180

[Close]

BLAST of Carg11529 vs. NCBI nr
Match: XP_022991298.1 (monothiol glutaredoxin-S10-like [Cucurbita maxima])

HSP 1 Score: 306.6 bits (784), Expect = 1.4e-79
Identity = 165/183 (90.16%), Postives = 165/183 (90.16%), Query Frame = 0


Query: 1   MAVPSNFTSPPLTSHRTLSFFFKASVLSLPFYNACASKSISISTKH----NGSTRIRPMS 60
           MAVPSNFTSPPLT HRTLS  FK  VLSLPFYNACASKSISIS KH    NGS RIRPMS
Sbjct: 1   MAVPSNFTSPPLTPHRTLSSSFKPPVLSLPFYNACASKSISIS-KHNALKNGSARIRPMS 60

Query: 61  IRAVSSSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCSYSSEVKALFKRLGAQPLVIE 120
           IRA       SSSFGSRLEESVKTTITQNPVVVYSKTWCSYSSEVKALFKRLGAQPLVIE
Sbjct: 61  IRA-------SSSFGSRLEESVKTTITQNPVVVYSKTWCSYSSEVKALFKRLGAQPLVIE 120

Query: 121 LDELGPQGPQLQKVLERLTGQHTVPNVFIGGKHIGGCTDTVKLYRKGELEPLLSEANAKN 180
           LDELGPQGPQLQKVLERLTGQHTVPNVFIGGKHIGGCTDTVKLYRKGELEPLLSEANAKN
Sbjct: 121 LDELGPQGPQLQKVLERLTGQHTVPNVFIGGKHIGGCTDTVKLYRKGELEPLLSEANAKN 175

[Close]

BLAST of Carg11529 vs. NCBI nr
Match: XP_038874858.1 (glutaredoxin-C5, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 305.8 bits (782), Expect = 2.4e-79
Identity = 165/184 (89.67%), Postives = 170/184 (92.39%), Query Frame = 0


Query: 1   MAVPSNFTSPPLTSHRTLSFFFKASVLSLPFYNACASKSISISTKH---NGSTRIRPMSI 60
           MAVPSNFTSP L S R+LSFFFKASV SLPFYN+C SKSISIS KH   N STR RPMSI
Sbjct: 1   MAVPSNFTSPRLNSPRSLSFFFKASVYSLPFYNSCTSKSISIS-KHNALNASTRTRPMSI 60

Query: 61  RAV--SSSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCSYSSEVKALFKRLGAQPLVI 120
           +AV  SSSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCSYSSEVKALF+RLG QPLVI
Sbjct: 61  KAVSSSSSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCSYSSEVKALFQRLGVQPLVI 120

Query: 121 ELDELGPQGPQLQKVLERLTGQHTVPNVFIGGKHIGGCTDTVKLYRKGELEPLLSEANAK 180
           ELDELGPQGPQLQKVLERLTGQHTVPNVFIGGKHIGGCTDTVKLYRKGELEPLLSEANAK
Sbjct: 121 ELDELGPQGPQLQKVLERLTGQHTVPNVFIGGKHIGGCTDTVKLYRKGELEPLLSEANAK 180

[Close]

BLAST of Carg11529 vs. ExPASy Swiss-Prot
Match: Q8GWS0 (Glutaredoxin-C5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=GRXC5 PE=1 SV=1)

HSP 1 Score: 195.3 bits (495), Expect = 6.0e-49
Identity = 102/169 (60.36%), Postives = 125/169 (73.96%), Query Frame = 0


Query: 11  PLTSHRTLSFFFKASVLSLPFYNACASKSISISTKHNGSTRIRPMSIRAVSSSSSSSSSF 70
           P+ S    S+ F    +  P Y  C  +S S+    + S           S++SSSSSSF
Sbjct: 18  PIPSVSCSSYSFSLIYVGSP-YKRCLKQSCSVRAMTSSS-----------SAASSSSSSF 77

Query: 71  GSRLEESVKTTITQNPVVVYSKTWCSYSSEVKALFKRLGAQPLVIELDELGPQGPQLQKV 130
           GSR+EES++ T+T+N VV+YSKTWCSY +EVK LFKRLG QPLV+ELD+LGPQGPQLQKV
Sbjct: 78  GSRMEESIRKTVTENTVVIYSKTWCSYCTEVKTLFKRLGVQPLVVELDQLGPQGPQLQKV 137

Query: 131 LERLTGQHTVPNVFIGGKHIGGCTDTVKLYRKGELEPLLSEANAKNTET 180
           LERLTGQHTVPNVF+ GKHIGGCTDTVKL RKG+LE +L+EAN KN ++
Sbjct: 138 LERLTGQHTVPNVFVCGKHIGGCTDTVKLNRKGDLELMLAEANGKNGQS 174

[Close]

BLAST of Carg11529 vs. ExPASy Swiss-Prot
Match: Q0J3L4 (Monothiol glutaredoxin-S10 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXS10 PE=2 SV=2)

HSP 1 Score: 183.7 bits (465), Expect = 1.8e-45
Identity = 91/119 (76.47%), Postives = 102/119 (85.71%), Query Frame = 0


Query: 53  RPMSIRAVSSSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCSYSSEVKALFKRLGAQP 112
           R  S+   +SSSS  SSFGSR+E+SVK T+  NPVV+YSK+WCSYS EVKALFKR+G QP
Sbjct: 38  RARSLATRASSSSPDSSFGSRMEDSVKRTLADNPVVIYSKSWCSYSMEVKALFKRIGVQP 97

Query: 113 LVIELDELGPQGPQLQKVLERLTGQHTVPNVFIGGKHIGGCTDTVKLYRKGELEPLLSE 172
            VIELD+LG QGPQLQKVLERLTGQ TVPNVFIGGKHIGGCTDTVKL+RKGEL  +LSE
Sbjct: 98  HVIELDQLGAQGPQLQKVLERLTGQSTVPNVFIGGKHIGGCTDTVKLHRKGELATMLSE 156

[Close]

BLAST of Carg11529 vs. ExPASy Swiss-Prot
Match: Q8LBS4 (Monothiol glutaredoxin-S12, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=GRXS12 PE=1 SV=2)

HSP 1 Score: 180.3 bits (456), Expect = 2.0e-44
Identity = 97/178 (54.49%), Postives = 127/178 (71.35%), Query Frame = 0


Query: 5   SNFTSPPLTSHRTLSFFFKASVLS---LPFYNACASKSISISTKHNGSTRIRPMSIRAVS 64
           +N T   L S+  +SF   + + +   LPF        I I++         P+   +V 
Sbjct: 9   ANMTWTSLNSNPAISFSMLSGIRNLGMLPFRRCLKPTVIGIAS-------WPPLRCSSVK 68

Query: 65  SSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCSYSSEVKALFKRLGAQPLVIELDELG 124
           + SSSSSS GS LEE+VKTT+ +NPVVVYSKTWCSYSS+VK+LFK L  +PLV+ELD+LG
Sbjct: 69  AMSSSSSSSGSTLEETVKTTVAENPVVVYSKTWCSYSSQVKSLFKSLQVEPLVVELDQLG 128

Query: 125 PQGPQLQKVLERLTGQHTVPNVFIGGKHIGGCTDTVKLYRKGELEPLLSEANAKNTET 180
            +G QLQ VLE++TGQ+TVPNVFIGGKHIGGC+DT++L+ KGELE +L+EAN KN +T
Sbjct: 129 SEGSQLQNVLEKITGQYTVPNVFIGGKHIGGCSDTLQLHNKGELEAILAEANGKNGQT 179

[Close]

BLAST of Carg11529 vs. ExPASy Swiss-Prot
Match: O81187 (Glutaredoxin OS=Vernicia fordii OX=73154 PE=3 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 3.1e-21
Identity = 52/93 (55.91%), Postives = 64/93 (68.82%), Query Frame = 0


Query: 82  ITQNPVVVYSKTWCSYSSEVKALFKRLGAQPLVIELDELGPQGPQLQKVLERLTGQHTVP 141
           ++ N VVV+SKT+C Y + VK L  +LGAQ  VIELD     G  LQ  L   TGQ TVP
Sbjct: 10  VSSNSVVVFSKTFCPYCTSVKQLLNQLGAQFKVIELDS-ESDGSDLQNALAEWTGQRTVP 69

Query: 142 NVFIGGKHIGGCTDTVKLYRKGELEPLLSEANA 175
           NVFIGGKHIGGC  T  ++++G+L PLL+EA A
Sbjct: 70  NVFIGGKHIGGCDKTTGMHQEGKLIPLLTEAGA 101

[Close]

BLAST of Carg11529 vs. ExPASy Swiss-Prot
Match: P55142 (Glutaredoxin-C6 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC6 PE=1 SV=2)

HSP 1 Score: 102.4 bits (254), Expect = 5.3e-21
Identity = 53/96 (55.21%), Postives = 64/96 (66.67%), Query Frame = 0


Query: 79  KTTITQNPVVVYSKTWCSYSSEVKALFKRLGAQPLVIELDELGPQGPQLQKVLERLTGQH 138
           K T+   PVVVYSK++C +   VK LF++LGA    IELD     G +LQ  L   TGQ 
Sbjct: 7   KETVASAPVVVYSKSYCPFCVRVKKLFEQLGATFKAIELDG-ESDGSELQSALAEWTGQR 66

Query: 139 TVPNVFIGGKHIGGCTDTVKLYRKGELEPLLSEANA 175
           TVPNVFI GKHIGGC DT+ L  +G+L PLL+EA A
Sbjct: 67  TVPNVFINGKHIGGCDDTLALNNEGKLVPLLTEAGA 101

[Close]

BLAST of Carg11529 vs. ExPASy TrEMBL
Match: A0A6J1GS13 (glutaredoxin-C5, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111456587 PE=3 SV=1)

HSP 1 Score: 343.2 bits (879), Expect = 6.6e-91
Identity = 179/180 (99.44%), Postives = 179/180 (99.44%), Query Frame = 0


Query: 1   MAVPSNFTSPPLTSHRTLSFFFKASVLSLPFYNACASKSISISTKHNGSTRIRPMSIRAV 60
           MAVPSNFTSPPLTSHRTLSFFFKASVLSLPFYNACASKSISISTKHNGSTRIRPMSIRAV
Sbjct: 1   MAVPSNFTSPPLTSHRTLSFFFKASVLSLPFYNACASKSISISTKHNGSTRIRPMSIRAV 60

Query: 61  -SSSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCSYSSEVKALFKRLGAQPLVIELDE 120
            SSSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCSYSSEVKALFKRLGAQPLVIELDE
Sbjct: 61  SSSSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCSYSSEVKALFKRLGAQPLVIELDE 120

Query: 121 LGPQGPQLQKVLERLTGQHTVPNVFIGGKHIGGCTDTVKLYRKGELEPLLSEANAKNTET 180
           LGPQGPQLQKVLERLTGQHTVPNVFIGGKHIGGCTDTVKLYRKGELEPLLSEANAKNTET
Sbjct: 121 LGPQGPQLQKVLERLTGQHTVPNVFIGGKHIGGCTDTVKLYRKGELEPLLSEANAKNTET 180

[Close]

BLAST of Carg11529 vs. ExPASy TrEMBL
Match: A0A6J1JVU3 (monothiol glutaredoxin-S10-like OS=Cucurbita maxima OX=3661 GN=LOC111487992 PE=3 SV=1)

HSP 1 Score: 306.6 bits (784), Expect = 6.8e-80
Identity = 165/183 (90.16%), Postives = 165/183 (90.16%), Query Frame = 0


Query: 1   MAVPSNFTSPPLTSHRTLSFFFKASVLSLPFYNACASKSISISTKH----NGSTRIRPMS 60
           MAVPSNFTSPPLT HRTLS  FK  VLSLPFYNACASKSISIS KH    NGS RIRPMS
Sbjct: 1   MAVPSNFTSPPLTPHRTLSSSFKPPVLSLPFYNACASKSISIS-KHNALKNGSARIRPMS 60

Query: 61  IRAVSSSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCSYSSEVKALFKRLGAQPLVIE 120
           IRA       SSSFGSRLEESVKTTITQNPVVVYSKTWCSYSSEVKALFKRLGAQPLVIE
Sbjct: 61  IRA-------SSSFGSRLEESVKTTITQNPVVVYSKTWCSYSSEVKALFKRLGAQPLVIE 120

Query: 121 LDELGPQGPQLQKVLERLTGQHTVPNVFIGGKHIGGCTDTVKLYRKGELEPLLSEANAKN 180
           LDELGPQGPQLQKVLERLTGQHTVPNVFIGGKHIGGCTDTVKLYRKGELEPLLSEANAKN
Sbjct: 121 LDELGPQGPQLQKVLERLTGQHTVPNVFIGGKHIGGCTDTVKLYRKGELEPLLSEANAKN 175

[Close]

BLAST of Carg11529 vs. ExPASy TrEMBL
Match: A0A0A0KA52 (Glutaredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G087860 PE=3 SV=1)

HSP 1 Score: 296.6 bits (758), Expect = 7.0e-77
Identity = 161/185 (87.03%), Postives = 166/185 (89.73%), Query Frame = 0


Query: 1   MAVPSNFTSPPLTSHRTLSFFFKASVLSLPFYNACASKSISISTKHN---GSTRIRPMSI 60
           MAVPSNFTS P  S R LSFFFKASV  LPFYN+C SKSISIS KHN   G TR RPMSI
Sbjct: 11  MAVPSNFTSFPPNSPRPLSFFFKASVFPLPFYNSCTSKSISIS-KHNAFTGFTRTRPMSI 70

Query: 61  RAV---SSSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCSYSSEVKALFKRLGAQPLV 120
           ++V   SSSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCSYS EVKALFKRLG QPLV
Sbjct: 71  QSVSSSSSSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCSYSFEVKALFKRLGVQPLV 130

Query: 121 IELDELGPQGPQLQKVLERLTGQHTVPNVFIGGKHIGGCTDTVKLYRKGELEPLLSEANA 180
           IELDELGPQGPQLQKVLERLTGQHTVPNVFIGGKHIGGCTDTVKLYRKGELEP+LSEANA
Sbjct: 131 IELDELGPQGPQLQKVLERLTGQHTVPNVFIGGKHIGGCTDTVKLYRKGELEPMLSEANA 190

[Close]

BLAST of Carg11529 vs. ExPASy TrEMBL
Match: A0A5D3DLT6 (Glutaredoxin-C5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G001430 PE=3 SV=1)

HSP 1 Score: 294.3 bits (752), Expect = 3.5e-76
Identity = 160/184 (86.96%), Postives = 166/184 (90.22%), Query Frame = 0


Query: 1   MAVPSNFTSPPLTSHRTLSFFFKASVLSLPFYNACASKSISISTKH---NGSTRIRPMSI 60
           MAVPSNFTS P  S R LSFFFKASV SLPFYN+C SKSISIS KH   NG TR R MSI
Sbjct: 11  MAVPSNFTSVPPNSPRPLSFFFKASVFSLPFYNSCTSKSISIS-KHNSLNGFTRTRSMSI 70

Query: 61  RAV---SSSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCSYSSEVKALFKRLGAQPLV 120
           ++V   SSSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCSYSSEVKALFKRLG QPLV
Sbjct: 71  QSVSSSSSSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCSYSSEVKALFKRLGVQPLV 130

Query: 121 IELDELGPQGPQLQKVLERLTGQHTVPNVFIGGKHIGGCTDTVKLYRKGELEPLLSEANA 179
           IELDELGPQGPQLQKVLERLTGQHTVPNVFIGGKHIGGCTDTVKLYRKGELEP+LSEANA
Sbjct: 131 IELDELGPQGPQLQKVLERLTGQHTVPNVFIGGKHIGGCTDTVKLYRKGELEPMLSEANA 190

[Close]

BLAST of Carg11529 vs. ExPASy TrEMBL
Match: A0A1S3CB05 (glutaredoxin-C5, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103498937 PE=3 SV=1)

HSP 1 Score: 294.3 bits (752), Expect = 3.5e-76
Identity = 160/184 (86.96%), Postives = 166/184 (90.22%), Query Frame = 0


Query: 1   MAVPSNFTSPPLTSHRTLSFFFKASVLSLPFYNACASKSISISTKH---NGSTRIRPMSI 60
           MAVPSNFTS P  S R LSFFFKASV SLPFYN+C SKSISIS KH   NG TR R MSI
Sbjct: 11  MAVPSNFTSVPPNSPRPLSFFFKASVFSLPFYNSCTSKSISIS-KHNSLNGFTRTRSMSI 70

Query: 61  RAV---SSSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCSYSSEVKALFKRLGAQPLV 120
           ++V   SSSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCSYSSEVKALFKRLG QPLV
Sbjct: 71  QSVSSSSSSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCSYSSEVKALFKRLGVQPLV 130

Query: 121 IELDELGPQGPQLQKVLERLTGQHTVPNVFIGGKHIGGCTDTVKLYRKGELEPLLSEANA 179
           IELDELGPQGPQLQKVLERLTGQHTVPNVFIGGKHIGGCTDTVKLYRKGELEP+LSEANA
Sbjct: 131 IELDELGPQGPQLQKVLERLTGQHTVPNVFIGGKHIGGCTDTVKLYRKGELEPMLSEANA 190

[Close]

BLAST of Carg11529 vs. TAIR 10
Match: AT4G28730.1 (Glutaredoxin family protein )

HSP 1 Score: 195.3 bits (495), Expect = 4.2e-50
Identity = 102/169 (60.36%), Postives = 125/169 (73.96%), Query Frame = 0


Query: 11  PLTSHRTLSFFFKASVLSLPFYNACASKSISISTKHNGSTRIRPMSIRAVSSSSSSSSSF 70
           P+ S    S+ F    +  P Y  C  +S S+    + S           S++SSSSSSF
Sbjct: 18  PIPSVSCSSYSFSLIYVGSP-YKRCLKQSCSVRAMTSSS-----------SAASSSSSSF 77

Query: 71  GSRLEESVKTTITQNPVVVYSKTWCSYSSEVKALFKRLGAQPLVIELDELGPQGPQLQKV 130
           GSR+EES++ T+T+N VV+YSKTWCSY +EVK LFKRLG QPLV+ELD+LGPQGPQLQKV
Sbjct: 78  GSRMEESIRKTVTENTVVIYSKTWCSYCTEVKTLFKRLGVQPLVVELDQLGPQGPQLQKV 137

Query: 131 LERLTGQHTVPNVFIGGKHIGGCTDTVKLYRKGELEPLLSEANAKNTET 180
           LERLTGQHTVPNVF+ GKHIGGCTDTVKL RKG+LE +L+EAN KN ++
Sbjct: 138 LERLTGQHTVPNVFVCGKHIGGCTDTVKLNRKGDLELMLAEANGKNGQS 174

[Close]

BLAST of Carg11529 vs. TAIR 10
Match: AT2G20270.1 (Thioredoxin superfamily protein )

HSP 1 Score: 180.3 bits (456), Expect = 1.4e-45
Identity = 97/178 (54.49%), Postives = 127/178 (71.35%), Query Frame = 0


Query: 5   SNFTSPPLTSHRTLSFFFKASVLS---LPFYNACASKSISISTKHNGSTRIRPMSIRAVS 64
           +N T   L S+  +SF   + + +   LPF        I I++         P+   +V 
Sbjct: 9   ANMTWTSLNSNPAISFSMLSGIRNLGMLPFRRCLKPTVIGIAS-------WPPLRCSSVK 68

Query: 65  SSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCSYSSEVKALFKRLGAQPLVIELDELG 124
           + SSSSSS GS LEE+VKTT+ +NPVVVYSKTWCSYSS+VK+LFK L  +PLV+ELD+LG
Sbjct: 69  AMSSSSSSSGSTLEETVKTTVAENPVVVYSKTWCSYSSQVKSLFKSLQVEPLVVELDQLG 128

Query: 125 PQGPQLQKVLERLTGQHTVPNVFIGGKHIGGCTDTVKLYRKGELEPLLSEANAKNTET 180
            +G QLQ VLE++TGQ+TVPNVFIGGKHIGGC+DT++L+ KGELE +L+EAN KN +T
Sbjct: 129 SEGSQLQNVLEKITGQYTVPNVFIGGKHIGGCSDTLQLHNKGELEAILAEANGKNGQT 179

[Close]

BLAST of Carg11529 vs. TAIR 10
Match: AT2G20270.2 (Thioredoxin superfamily protein )

HSP 1 Score: 165.6 bits (418), Expect = 3.6e-41
Identity = 97/205 (47.32%), Postives = 127/205 (61.95%), Query Frame = 0


Query: 5   SNFTSPPLTSHRTLSFFFKASVLS---LPFYNACASKSISISTKHNGSTRIRPMSIRAVS 64
           +N T   L S+  +SF   + + +   LPF        I I++         P+   +V 
Sbjct: 9   ANMTWTSLNSNPAISFSMLSGIRNLGMLPFRRCLKPTVIGIAS-------WPPLRCSSVK 68

Query: 65  SSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCSYSSEVKALFKRLGAQPLVIELDEL- 124
           + SSSSSS GS LEE+VKTT+ +NPVVVYSKTWCSYSS+VK+LFK L  +PLV+ELD+L 
Sbjct: 69  AMSSSSSSSGSTLEETVKTTVAENPVVVYSKTWCSYSSQVKSLFKSLQVEPLVVELDQLV 128

Query: 125 --------------------------GPQGPQLQKVLERLTGQHTVPNVFIGGKHIGGCT 180
                                     G +G QLQ VLE++TGQ+TVPNVFIGGKHIGGC+
Sbjct: 129 SLGKTSLPHDIGLKHLQKFWWFLAFPGSEGSQLQNVLEKITGQYTVPNVFIGGKHIGGCS 188

[Close]

BLAST of Carg11529 vs. TAIR 10
Match: AT5G40370.1 (Glutaredoxin family protein )

HSP 1 Score: 95.5 bits (236), Expect = 4.6e-20
Identity = 49/99 (49.49%), Postives = 62/99 (62.63%), Query Frame = 0


Query: 76  ESVKTTITQNPVVVYSKTWCSYSSEVKALFKRLGAQPLVIELDELGPQGPQLQKVLERLT 135
           +  K  +    VVV+SKT+C Y   VK L ++LGA+   +ELD     G Q+Q  L   T
Sbjct: 4   QKAKEIVNSESVVVFSKTYCPYCVRVKELLQQLGAKFKAVELD-TESDGSQIQSGLAEWT 63

Query: 136 GQHTVPNVFIGGKHIGGCTDTVKLYRKGELEPLLSEANA 175
           GQ TVPNVFIGG HIGGC  T  L++ G+L PLL+EA A
Sbjct: 64  GQRTVPNVFIGGNHIGGCDATSNLHKDGKLVPLLTEAGA 101

[Close]

BLAST of Carg11529 vs. TAIR 10
Match: AT5G63030.1 (Thioredoxin superfamily protein )

HSP 1 Score: 95.5 bits (236), Expect = 4.6e-20
Identity = 48/96 (50.00%), Postives = 63/96 (65.62%), Query Frame = 0


Query: 79  KTTITQNPVVVYSKTWCSYSSEVKALFKRLGAQPLVIELDELGPQGPQLQKVLERLTGQH 138
           K  ++  PVVV+SKT+C Y   VK L  +LGA   V+ELDE+   G ++Q  L   TGQ 
Sbjct: 23  KEIVSAYPVVVFSKTYCGYCQRVKQLLTQLGATFKVLELDEMS-DGGEIQSALSEWTGQT 82

Query: 139 TVPNVFIGGKHIGGCTDTVKLYRKGELEPLLSEANA 175
           TVPNVFI G HIGGC   ++  ++G+L PLL+EA A
Sbjct: 83  TVPNVFIKGNHIGGCDRVMETNKQGKLVPLLTEAGA 117

The following BLAST results are available for this feature:

BLAST of Carg11529 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6576070.1	5.5e-92	100.00	Glutaredoxin-C5, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] ...	[more]
XP_022954295.1	1.4e-90	99.44	glutaredoxin-C5, chloroplastic-like [Cucurbita moschata]	[more]
XP_023549357.1	2.2e-88	97.27	glutaredoxin-C5, chloroplastic-like [Cucurbita pepo subsp. pepo]	[more]
XP_022991298.1	1.4e-79	90.16	monothiol glutaredoxin-S10-like [Cucurbita maxima]	[more]
XP_038874858.1	2.4e-79	89.67	glutaredoxin-C5, chloroplastic-like [Benincasa hispida]	[more]

BLAST of Carg11529 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GWS0	6.0e-49	60.36	Glutaredoxin-C5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=GRXC5 PE=1 SV=...	[more]
Q0J3L4	1.8e-45	76.47	Monothiol glutaredoxin-S10 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXS10 PE...	[more]
Q8LBS4	2.0e-44	54.49	Monothiol glutaredoxin-S12, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=GRX...	[more]
O81187	3.1e-21	55.91	Glutaredoxin OS=Vernicia fordii OX=73154 PE=3 SV=1	[more]
P55142	5.3e-21	55.21	Glutaredoxin-C6 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC6 PE=1 SV=2	[more]

BLAST of Carg11529 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GS13	6.6e-91	99.44	glutaredoxin-C5, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC11145658...	[more]
A0A6J1JVU3	6.8e-80	90.16	monothiol glutaredoxin-S10-like OS=Cucurbita maxima OX=3661 GN=LOC111487992 PE=3...	[more]
A0A0A0KA52	7.0e-77	87.03	Glutaredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G08786...	[more]
A0A5D3DLT6	3.5e-76	86.96	Glutaredoxin-C5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G0014...	[more]
A0A1S3CB05	3.5e-76	86.96	glutaredoxin-C5, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103498937 PE=3 SV=1	[more]

BLAST of Carg11529 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G28730.1	4.2e-50	60.36	Glutaredoxin family protein	[more]
AT2G20270.1	1.4e-45	54.49	Thioredoxin superfamily protein	[more]
AT2G20270.2	3.6e-41	47.32	Thioredoxin superfamily protein	[more]
AT5G40370.1	4.6e-20	49.49	Glutaredoxin family protein	[more]
AT5G63030.1	4.6e-20	50.00	Thioredoxin superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014025	Glutaredoxin subgroup	PRINTS	PR00160	GLUTAREDOXIN	coord: 133..146 score: 57.14 coord: 87..105 score: 36.18 coord: 147..160 score: 47.62
IPR011899	Glutaredoxin, eukaryotic/virial	TIGRFAM	TIGR02180	TIGR02180	coord: 87..168 e-value: 5.0E-27 score: 91.9
IPR002109	Glutaredoxin	PFAM	PF00462	Glutaredoxin	coord: 87..150 e-value: 1.3E-15 score: 57.4
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 68..179 e-value: 4.9E-40 score: 137.7
None	No IPR available	PANTHER	PTHR45694:SF18	GLUTAREDOXIN 2	coord: 61..177
None	No IPR available	PANTHER	PTHR45694	GLUTAREDOXIN 2	coord: 61..177
None	No IPR available	PROSITE	PS51354	GLUTAREDOXIN_2	coord: 75..176 score: 24.225859
None	No IPR available	CDD	cd03419	GRX_GRXh_1_2_like	coord: 86..168 e-value: 4.69729E-43 score: 136.516
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 75..173

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg11529-RA	Carg11529-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0034599	cellular response to oxidative stress
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0050660	flavin adenine dinucleotide binding
molecular_function	GO:0015038	glutathione disulfide oxidoreductase activity
molecular_function	GO:0097573	glutathione oxidoreductase activity
molecular_function	GO:0050661	NADP binding
molecular_function	GO:0004499	N,N-dimethylaniline monooxygenase activity