Carg11444 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg11444
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	F-box protein SKIP8-like
Location	Carg_Chr16: 3035373 .. 3038206 (-)
RNA-Seq Expression	Carg11444
Synteny	Carg11444

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTCACGGGTCACTAACCCAAAACCTCCACCTCCTCCTCCTCCTTCTTCCGCCTCTCCGATTCCGCAGAATTCCGATTCCGTCACCGGAGATCATTTCCTGAAACTCATCTCCGGCGTTGGCCTACACATTTCATGTACCAAACTCCATGGTTGACCATCTATTGCACAGTTGAGCTTCTCACGGCGACGGCGCGTTTACACACCTTCCGCTGAAACGCGACGCGACGCGAAAAATTTCTTAGGGTTTCATGTTCTGTGAGGCTGAACGTCATATAGAGGCTTTCATGTCGTTTGAATGGAGATTGCCTCTGCTGCCACAATTGCCTTGTTGTCCCAACCTTTTCCTATAGCTGCGATTGTCACTTTTCTTTGTTTTCTTCTCGCTCTTTTCGCCGCCGTTCGATTGGTTTCTGTTCCTTACATTAGAAGGACGAAAACGGTACAATTGGAGGGCGTGGGTACGAGGAATTTTAATTGTACCTGTTCGCTTAACGGTGGTGTGGCTATTGGGGGTTTGAACCCCAGGGCTGAGATTACTTCTTCGACTAGTACGAGTATGCCTTATTTGAACGGTCGTGCAGTGGAAGTGCTGGAGAAGGCGCCGGTTGTTGTAACGGAGCGGCAGACGGGCGCTTCGATGATGGAGCAGTTGGTCCCGGAGATTACTACGCACGCTCTTAGTTACTTGGATTATCCCAGCCTGTGTCGTTTGTCCATGACTAATTCCTTGATGCGGAAAGCCGCGAATGATGATAGTGCCTGGAAGGCGCTTTATCATAAGGTACGAGTTCGGTTTAATCTTCTTTTGTACGGTTTTTGTCTGAACTGATGGAGTTATGGTAATTTATTTTTCTTCTGTAAGATGAGTGCCGGGGAAGAAACACGAATGGAATGTAGTGTTATTTGTTTCGAACTTTTGCTACCATAGTCAGCATCTTTTTGTAATTCTGAAGGGGAGCGAACTGGCTTTATTAACTCTTATCTTTCAAATAATGAAATCGTTTCAATTGATGGCTTGTGGCCGAAGTTCTGGAATTGGCAAGACCCATCTCTGTGCTCCCCACCACTTTTGTGTGTTGTTCTAGATGCTTAAGTCTATTTAGGATTCTTTGGGGCTAAGACAACATTTCCCATGAAATCTTTTAGGACTTCACACTGGAACAGGATACTGTAACTCCAATTAACGGGTGGAAGGCATATTATGCTGCAACAAGAACAATTATGAATATCAATGCCCAATTCTATAACATCATCAGAGACAGGTCTCTTCAAGCGATGAGTCATTTTTGGTTAAATGCAGATTATGTGAAGTGTATTCATGCCTCAGGAGAATTCTTTTCCGGGTATTTACCTTATTGTCTTTTTTTTACCATGATATCTGACTGCTGCTTCATATGGCCAACTGAATTATCAAACACGTTACACTTCCTGCATTTGCATATTTTAGAGACACTTTTTGGTCTCCTCATCTGATATTTACATTTTCTAAGCCTTTTTACTGAGAAGAAGCTGATATATAAGGGATTTTTAGAAATGACATGAGGCTTATGATTGCTGTCATATGGGTGCTGTGGATTATCTGAATTTCTTGATTTTTAAGTTTTTTTTATATAAGAACGTTTGAGAATAGTAACTTATGTACTATGTTGAGACCGGCAATACAGAAGACCTTGTGTCTCTACTCTCTACTATCACTTGATAGAGCAATTTATGAGATTTCGGATAAAAGGGTCTTCCTCGTATTTTTGCACAAATTTCTCATTTACTTTGGAAAGGCCATCTTTATATGCTGAAAGATGGGCAGCATGTGCTTAGGTTGCCACAAGGCCCTCAACTAGTTGTGGTGGACCAATGCTGCATTGTGGACTTTGTTTTTTGAATCTGGCCATATCCAAAGTGCTTCTCTAAGGGGAAAGATTTTTGGCCATATCCAAAGTGCTTCTCTAAGGGGAAAGATTTTTGGCCATATCCAAAGTGCTTCTCTAAGAGATACTGAAGAATGTTGCTTGTAATTCACTCAGGTCATATCAAGTTTAGTAGAAATTTGTATTAATATTCAACTTCAATTTAGAATAGATGATATATGACGATAAATTAACTTGCCTAACTTTTTAAGTGTGTGGAGCTTTATCATTCTGCCTCTGCGGTTCTTTTTATTTGGGGGTGGGTGGATGGGTGGATGGGTGGATGGGTGGATGGGTGCTGGAACGATCAACAAAAACACTTATTAGCTTTAGATTGAACCATGTTGAAGGAATTGAATATTGAACTTGTCAAGTTACTATATCAACAAAAAATACTTGATTGGGAAAGACTGTTTATATATGTTAATCCAGTACTTACAATGATTGGGTTTTCTTTGTCAACAGGTATAATGCCGTAATTCAAAGTTGGCAGGTTGCATTCAATTGGGAACAAGGGATTAATTTTCAGGTCCGTGATGTACGGGCTCGTGTGCTTACAGACATGGCTTGGGTTAGCATGAAAACCTACGTTGACATGGATACAGGGCCATTCAATGTGACTAACATCTATGAGTTCCATAATGGTCGATGGTACATGGTGCATCATCACAGCTCCGTGATGCTCATTGTTGGGGAGATGGAACAACAAATGGTTCATGGGTAACTGAGAGAAGATAGAAGAGAAGTAATGGAAAAAGTATACAATACTAGGAGGTACAAAGATAGGGCGGTGTCTGGTAGCAGAAGCAAGGTTTAAAAGAAAGATTTCTTGTCGATTACTCTTAAACAACACCATTTTTAACTTTTCCAACCTCAGTTTTGCTTGATCTGTGTTCATTACTCCCGTTTTTCTTTCAAATTTGTTTTTT

mRNA sequence

ATTCACGGGTCACTAACCCAAAACCTCCACCTCCTCCTCCTCCTTCTTCCGCCTCTCCGATTCCGCAGAATTCCGATTCCGTCACCGGAGATCATTTCCTGAAACTCATCTCCGGCGTTGGCCTACACATTTCATGTACCAAACTCCATGGTTGACCATCTATTGCACAGTTGAGCTTCTCACGGCGACGGCGCGTTTACACACCTTCCGCTGAAACGCGACGCGACGCGAAAAATTTCTTAGGGTTTCATGTTCTGTGAGGCTGAACGTCATATAGAGGCTTTCATGTCGTTTGAATGGAGATTGCCTCTGCTGCCACAATTGCCTTGTTGTCCCAACCTTTTCCTATAGCTGCGATTGTCACTTTTCTTTGTTTTCTTCTCGCTCTTTTCGCCGCCGTTCGATTGGTTTCTGTTCCTTACATTAGAAGGACGAAAACGGTACAATTGGAGGGCGTGGGTACGAGGAATTTTAATTGTACCTGTTCGCTTAACGGTGGTGTGGCTATTGGGGGTTTGAACCCCAGGGCTGAGATTACTTCTTCGACTAGTACGAGTATGCCTTATTTGAACGGTCGTGCAGTGGAAGTGCTGGAGAAGGCGCCGGTTGTTGTAACGGAGCGGCAGACGGGCGCTTCGATGATGGAGCAGTTGGTCCCGGAGATTACTACGCACGCTCTTAGTTACTTGGATTATCCCAGCCTGTGTCGTTTGTCCATGACTAATTCCTTGATGCGGAAAGCCGCGAATGATGATAGTGCCTGGAAGGCGCTTTATCATAAGGACTTCACACTGGAACAGGATACTGTAACTCCAATTAACGGGTGGAAGGCATATTATGCTGCAACAAGAACAATTATGAATATCAATGCCCAATTCTATAACATCATCAGAGACAGGTCTCTTCAAGCGATGAGTCATTTTTGGTTAAATGCAGATTATGTGAAGTGTATTCATGCCTCAGGAGAATTCTTTTCCGGGTATAATGCCGTAATTCAAAGTTGGCAGGTTGCATTCAATTGGGAACAAGGGATTAATTTTCAGGTCCGTGATGTACGGGCTCGTGTGCTTACAGACATGGCTTGGGTTAGCATGAAAACCTACGTTGACATGGATACAGGGCCATTCAATGTGACTAACATCTATGAGTTCCATAATGGTCGATGGTACATGGTGCATCATCACAGCTCCGTGATGCTCATTGTTGGGGAGATGGAACAACAAATGGTTCATGGGTAACTGAGAGAAGATAGAAGAGAAGTAATGGAAAAAGTATACAATACTAGGAGGTACAAAGATAGGGCGGTGTCTGGTAGCAGAAGCAAGGTTTAAAAGAAAGATTTCTTGTCGATTACTCTTAAACAACACCATTTTTAACTTTTCCAACCTCAGTTTTGCTTGATCTGTGTTCATTACTCCCGTTTTTCTTTCAAATTTGTTTTTT

Coding sequence (CDS)

ATGGAGATTGCCTCTGCTGCCACAATTGCCTTGTTGTCCCAACCTTTTCCTATAGCTGCGATTGTCACTTTTCTTTGTTTTCTTCTCGCTCTTTTCGCCGCCGTTCGATTGGTTTCTGTTCCTTACATTAGAAGGACGAAAACGGTACAATTGGAGGGCGTGGGTACGAGGAATTTTAATTGTACCTGTTCGCTTAACGGTGGTGTGGCTATTGGGGGTTTGAACCCCAGGGCTGAGATTACTTCTTCGACTAGTACGAGTATGCCTTATTTGAACGGTCGTGCAGTGGAAGTGCTGGAGAAGGCGCCGGTTGTTGTAACGGAGCGGCAGACGGGCGCTTCGATGATGGAGCAGTTGGTCCCGGAGATTACTACGCACGCTCTTAGTTACTTGGATTATCCCAGCCTGTGTCGTTTGTCCATGACTAATTCCTTGATGCGGAAAGCCGCGAATGATGATAGTGCCTGGAAGGCGCTTTATCATAAGGACTTCACACTGGAACAGGATACTGTAACTCCAATTAACGGGTGGAAGGCATATTATGCTGCAACAAGAACAATTATGAATATCAATGCCCAATTCTATAACATCATCAGAGACAGGTCTCTTCAAGCGATGAGTCATTTTTGGTTAAATGCAGATTATGTGAAGTGTATTCATGCCTCAGGAGAATTCTTTTCCGGGTATAATGCCGTAATTCAAAGTTGGCAGGTTGCATTCAATTGGGAACAAGGGATTAATTTTCAGGTCCGTGATGTACGGGCTCGTGTGCTTACAGACATGGCTTGGGTTAGCATGAAAACCTACGTTGACATGGATACAGGGCCATTCAATGTGACTAACATCTATGAGTTCCATAATGGTCGATGGTACATGGTGCATCATCACAGCTCCGTGATGCTCATTGTTGGGGAGATGGAACAACAAATGGTTCATGGGTAA

Protein sequence

MEIASAATIALLSQPFPIAAIVTFLCFLLALFAAVRLVSVPYIRRTKTVQLEGVGTRNFNCTCSLNGGVAIGGLNPRAEITSSTSTSMPYLNGRAVEVLEKAPVVVTERQTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDSAWKALYHKDFTLEQDTVTPINGWKAYYAATRTIMNINAQFYNIIRDRSLQAMSHFWLNADYVKCIHASGEFFSGYNAVIQSWQVAFNWEQGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNIYEFHNGRWYMVHHHSSVMLIVGEMEQQMVHG

Homology

[Close]

BLAST of Carg11444 vs. NCBI nr
Match: XP_022931549.1 (F-box protein SKIP8-like [Cucurbita moschata] >XP_023553511.1 F-box protein SKIP8 [Cucurbita pepo subsp. pepo] >KAG6577135.1 F-box protein SKIP8, partial [Cucurbita argyrosperma subsp. sororia] >KAG7015131.1 F-box protein SKIP8 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 625.9 bits (1613), Expect = 1.8e-175
Identity = 313/313 (100.00%), Postives = 313/313 (100.00%), Query Frame = 0


Query: 1   MEIASAATIALLSQPFPIAAIVTFLCFLLALFAAVRLVSVPYIRRTKTVQLEGVGTRNFN 60
           MEIASAATIALLSQPFPIAAIVTFLCFLLALFAAVRLVSVPYIRRTKTVQLEGVGTRNFN
Sbjct: 1   MEIASAATIALLSQPFPIAAIVTFLCFLLALFAAVRLVSVPYIRRTKTVQLEGVGTRNFN 60

Query: 61  CTCSLNGGVAIGGLNPRAEITSSTSTSMPYLNGRAVEVLEKAPVVVTERQTGASMMEQLV 120
           CTCSLNGGVAIGGLNPRAEITSSTSTSMPYLNGRAVEVLEKAPVVVTERQTGASMMEQLV
Sbjct: 61  CTCSLNGGVAIGGLNPRAEITSSTSTSMPYLNGRAVEVLEKAPVVVTERQTGASMMEQLV 120

Query: 121 PEITTHALSYLDYPSLCRLSMTNSLMRKAANDDSAWKALYHKDFTLEQDTVTPINGWKAY 180
           PEITTHALSYLDYPSLCRLSMTNSLMRKAANDDSAWKALYHKDFTLEQDTVTPINGWKAY
Sbjct: 121 PEITTHALSYLDYPSLCRLSMTNSLMRKAANDDSAWKALYHKDFTLEQDTVTPINGWKAY 180

Query: 181 YAATRTIMNINAQFYNIIRDRSLQAMSHFWLNADYVKCIHASGEFFSGYNAVIQSWQVAF 240
           YAATRTIMNINAQFYNIIRDRSLQAMSHFWLNADYVKCIHASGEFFSGYNAVIQSWQVAF
Sbjct: 181 YAATRTIMNINAQFYNIIRDRSLQAMSHFWLNADYVKCIHASGEFFSGYNAVIQSWQVAF 240

Query: 241 NWEQGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNIYEFHNGRWYMVHHHSSVM 300
           NWEQGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNIYEFHNGRWYMVHHHSSVM
Sbjct: 241 NWEQGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNIYEFHNGRWYMVHHHSSVM 300

Query: 301 LIVGEMEQQMVHG 314
           LIVGEMEQQMVHG
Sbjct: 301 LIVGEMEQQMVHG 313

[Close]

BLAST of Carg11444 vs. NCBI nr
Match: XP_022985415.1 (F-box protein SKIP8 [Cucurbita maxima])

HSP 1 Score: 621.7 bits (1602), Expect = 3.4e-174
Identity = 311/313 (99.36%), Postives = 311/313 (99.36%), Query Frame = 0


Query: 1   MEIASAATIALLSQPFPIAAIVTFLCFLLALFAAVRLVSVPYIRRTKTVQLEGVGTRNFN 60
           MEIASAATIALLSQPFPIAAIVTFLCFLLALFAAVRLVSVPYIRRT TVQLEGVGTRNFN
Sbjct: 1   MEIASAATIALLSQPFPIAAIVTFLCFLLALFAAVRLVSVPYIRRTTTVQLEGVGTRNFN 60

Query: 61  CTCSLNGGVAIGGLNPRAEITSSTSTSMPYLNGRAVEVLEKAPVVVTERQTGASMMEQLV 120
           CTCSLNGGVAIGGLNPRAEITSSTSTSMPYLNG AVEVLEKAPVVVTERQTGASMMEQLV
Sbjct: 61  CTCSLNGGVAIGGLNPRAEITSSTSTSMPYLNGHAVEVLEKAPVVVTERQTGASMMEQLV 120

Query: 121 PEITTHALSYLDYPSLCRLSMTNSLMRKAANDDSAWKALYHKDFTLEQDTVTPINGWKAY 180
           PEITTHALSYLDYPSLCRLSMTNSLMRKAANDDSAWKALYHKDFTLEQDTVTPINGWKAY
Sbjct: 121 PEITTHALSYLDYPSLCRLSMTNSLMRKAANDDSAWKALYHKDFTLEQDTVTPINGWKAY 180

Query: 181 YAATRTIMNINAQFYNIIRDRSLQAMSHFWLNADYVKCIHASGEFFSGYNAVIQSWQVAF 240
           YAATRTIMNINAQFYNIIRDRSLQAMSHFWLNADYVKCIHASGEFFSGYNAVIQSWQVAF
Sbjct: 181 YAATRTIMNINAQFYNIIRDRSLQAMSHFWLNADYVKCIHASGEFFSGYNAVIQSWQVAF 240

Query: 241 NWEQGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNIYEFHNGRWYMVHHHSSVM 300
           NWEQGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNIYEFHNGRWYMVHHHSSVM
Sbjct: 241 NWEQGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNIYEFHNGRWYMVHHHSSVM 300

Query: 301 LIVGEMEQQMVHG 314
           LIVGEMEQQMVHG
Sbjct: 301 LIVGEMEQQMVHG 313

[Close]

BLAST of Carg11444 vs. NCBI nr
Match: XP_004149013.1 (F-box protein SKIP8 [Cucumis sativus] >KGN53419.1 hypothetical protein Csa_015225 [Cucumis sativus])

HSP 1 Score: 597.4 bits (1539), Expect = 7.0e-167
Identity = 297/313 (94.89%), Postives = 304/313 (97.12%), Query Frame = 0


Query: 1   MEIASAATIALLSQPFPIAAIVTFLCFLLALFAAVRLVSVPYIRRTKTVQLEGVGTRNFN 60
           MEI S+ATIAL SQPFPIAAIVTFLCFLLA+F AVRLVSVPYIRRTKT+Q E VGTRN N
Sbjct: 1   MEIVSSATIALSSQPFPIAAIVTFLCFLLAIFVAVRLVSVPYIRRTKTLQSESVGTRNCN 60

Query: 61  CTCSLNGGVAIGGLNPRAEITSSTSTSMPYLNGRAVEVLEKAPVVVTERQTGASMMEQLV 120
           CTCSLNGGV I GL+PRAEITSSTSTSMPYLNGRAVEVLEKAPVVVTERQTGASMMEQLV
Sbjct: 61  CTCSLNGGVVIRGLDPRAEITSSTSTSMPYLNGRAVEVLEKAPVVVTERQTGASMMEQLV 120

Query: 121 PEITTHALSYLDYPSLCRLSMTNSLMRKAANDDSAWKALYHKDFTLEQDTVTPINGWKAY 180
           PEITTHALSYLDYPSLCRLSMTNSLMRKAANDD+AWKALYHKDFTLEQDTVTPINGWK+Y
Sbjct: 121 PEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDTVTPINGWKSY 180

Query: 181 YAATRTIMNINAQFYNIIRDRSLQAMSHFWLNADYVKCIHASGEFFSGYNAVIQSWQVAF 240
           YAATRTIMNINAQFYNIIRDRSLQAMS FWLNADYVKCIHASGEFFSGYNAV+QSWQVAF
Sbjct: 181 YAATRTIMNINAQFYNIIRDRSLQAMSRFWLNADYVKCIHASGEFFSGYNAVVQSWQVAF 240

Query: 241 NWEQGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNIYEFHNGRWYMVHHHSSVM 300
           NWEQGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNIYEFHNGRWYMVHHHSSVM
Sbjct: 241 NWEQGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNIYEFHNGRWYMVHHHSSVM 300

Query: 301 LIVGEMEQQMVHG 314
           LIVGEMEQQMVHG
Sbjct: 301 LIVGEMEQQMVHG 313

[Close]

BLAST of Carg11444 vs. NCBI nr
Match: XP_038880969.1 (F-box protein SKIP8-like [Benincasa hispida])

HSP 1 Score: 597.0 bits (1538), Expect = 9.1e-167
Identity = 298/313 (95.21%), Postives = 304/313 (97.12%), Query Frame = 0


Query: 1   MEIASAATIALLSQPFPIAAIVTFLCFLLALFAAVRLVSVPYIRRTKTVQLEGVGTRNFN 60
           MEI S+ATIAL SQPFPIAAIVTFLCFLLALFAAVRLVSVPYIRRTK +Q   +GTRN N
Sbjct: 1   MEIISSATIALSSQPFPIAAIVTFLCFLLALFAAVRLVSVPYIRRTKALQSVALGTRNCN 60

Query: 61  CTCSLNGGVAIGGLNPRAEITSSTSTSMPYLNGRAVEVLEKAPVVVTERQTGASMMEQLV 120
           CTCSLNGGV IGGL+PRAEITSSTSTSMPYLNGRAVEVLEKAPVVVTERQTGASMMEQLV
Sbjct: 61  CTCSLNGGVVIGGLDPRAEITSSTSTSMPYLNGRAVEVLEKAPVVVTERQTGASMMEQLV 120

Query: 121 PEITTHALSYLDYPSLCRLSMTNSLMRKAANDDSAWKALYHKDFTLEQDTVTPINGWKAY 180
           PEITTHALSYLDYPSLCRLSMTNSLMRKAANDD+AWKALYHKDFTLEQDTVTPINGWKAY
Sbjct: 121 PEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDTVTPINGWKAY 180

Query: 181 YAATRTIMNINAQFYNIIRDRSLQAMSHFWLNADYVKCIHASGEFFSGYNAVIQSWQVAF 240
           YAATRTIMNINAQFYNIIRDRSLQAMS FWLNADYVKCIHASGEFFSGYNAVIQSWQ+AF
Sbjct: 181 YAATRTIMNINAQFYNIIRDRSLQAMSRFWLNADYVKCIHASGEFFSGYNAVIQSWQLAF 240

Query: 241 NWEQGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNIYEFHNGRWYMVHHHSSVM 300
           NWEQGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNIYEFHNGRWYMVHHHSSVM
Sbjct: 241 NWEQGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNIYEFHNGRWYMVHHHSSVM 300

Query: 301 LIVGEMEQQMVHG 314
           LIVGEMEQQMVHG
Sbjct: 301 LIVGEMEQQMVHG 313

[Close]

BLAST of Carg11444 vs. NCBI nr
Match: KAA0044925.1 (F-box protein SKIP8 [Cucumis melo var. makuwa] >TYK16545.1 F-box protein SKIP8 [Cucumis melo var. makuwa])

HSP 1 Score: 594.3 bits (1531), Expect = 5.9e-166
Identity = 296/313 (94.57%), Postives = 304/313 (97.12%), Query Frame = 0


Query: 1   MEIASAATIALLSQPFPIAAIVTFLCFLLALFAAVRLVSVPYIRRTKTVQLEGVGTRNFN 60
           MEI S+ATIAL SQPFPIAAIVTFLCFLLA+F AVRLVSVPYIRRTK++Q E VGTRN N
Sbjct: 1   MEIVSSATIALSSQPFPIAAIVTFLCFLLAIFVAVRLVSVPYIRRTKSLQSESVGTRNCN 60

Query: 61  CTCSLNGGVAIGGLNPRAEITSSTSTSMPYLNGRAVEVLEKAPVVVTERQTGASMMEQLV 120
           CTCSLNGGV I GL+PRAEITSSTSTSMPYLNGRAVEVLEKAPVVVTERQTGASMMEQLV
Sbjct: 61  CTCSLNGGVVIRGLDPRAEITSSTSTSMPYLNGRAVEVLEKAPVVVTERQTGASMMEQLV 120

Query: 121 PEITTHALSYLDYPSLCRLSMTNSLMRKAANDDSAWKALYHKDFTLEQDTVTPINGWKAY 180
           PEITTHALSYLDYPSLCRLSMTNSLMRKAANDD+AWKALYHKDFTLEQDTVTPINGWK+Y
Sbjct: 121 PEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDTVTPINGWKSY 180

Query: 181 YAATRTIMNINAQFYNIIRDRSLQAMSHFWLNADYVKCIHASGEFFSGYNAVIQSWQVAF 240
           YAATRTIMNINAQFYNIIRDRSLQAMS FWLNADYVKCIHASGEFFSGYNAVIQSWQVAF
Sbjct: 181 YAATRTIMNINAQFYNIIRDRSLQAMSRFWLNADYVKCIHASGEFFSGYNAVIQSWQVAF 240

Query: 241 NWEQGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNIYEFHNGRWYMVHHHSSVM 300
           NWEQGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNIYEFH+GRWYMVHHHSSVM
Sbjct: 241 NWEQGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNIYEFHDGRWYMVHHHSSVM 300

Query: 301 LIVGEMEQQMVHG 314
           LIVGEMEQQMVHG
Sbjct: 301 LIVGEMEQQMVHG 313

[Close]

BLAST of Carg11444 vs. ExPASy Swiss-Prot
Match: Q93YV9 (F-box protein SKIP8 OS=Arabidopsis thaliana OX=3702 GN=SKIP8 PE=1 SV=1)

HSP 1 Score: 338.2 bits (866), Expect = 1.0e-91
Identity = 162/247 (65.59%), Postives = 191/247 (77.33%), Query Frame = 0


Query: 66  NGGVAIGGLNPRAEITSSTSTSMPYLNGRAVEVLEKAPVVVTERQTGASMMEQLVPEITT 125
           NGG    G   R  +T+ST                     V + + G SMMEQLVPEITT
Sbjct: 8   NGGTPPMGGGERTTVTTST---------------------VADDKPGVSMMEQLVPEITT 67

Query: 126 HALSYLDYPSLCRLSMTNSLMRKAANDDSAWKALYHKDFTLEQDTVTPINGWKAYYAATR 185
           HALSYLDYPSLCRLSMTNSLMRKAANDD+AWKALYHKDFTLEQD +TP+NGWK YYA TR
Sbjct: 68  HALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDGITPVNGWKEYYATTR 127

Query: 186 TIMNINAQFYNIIRDRSLQAMSHFWLNADYVKCIHASGEFFSGYNAVIQSWQVAFNWEQG 245
            I+++N +F+ IIRDR+LQAM+  WLN+DYVKCIHASGE FSGYN VIQSWQ+ FNWEQG
Sbjct: 128 AIISVNTEFFTIIRDRALQAMARLWLNSDYVKCIHASGELFSGYNEVIQSWQLCFNWEQG 187

Query: 246 INFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNIYEFHNGRWYMVHHHSSVMLIVGE 305
            +FQV  VR R+LTDMAWV+MK Y+++D GPF +TN++EFHNGRW+MVHHHSSVMLI  +
Sbjct: 188 FDFQVHTVRTRILTDMAWVTMKAYLNVDGGPFLITNVFEFHNGRWHMVHHHSSVMLI--D 231

Query: 306 MEQQMVH 313
            +Q +VH
Sbjct: 248 DQQVVVH 231

[Close]

BLAST of Carg11444 vs. ExPASy Swiss-Prot
Match: Q9T0B0 (Probable F-box protein At4g23960 OS=Arabidopsis thaliana OX=3702 GN=At4g23960 PE=4 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 3.0e-35
Identity = 66/115 (57.39%), Postives = 89/115 (77.39%), Query Frame = 0


Query: 115 MMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDSAWKALYHKDFTLEQDTVTPI 174
           M+EQL PE+T +AL YLDY SLC+LSMT+S MRK ANDD  W+ALY ++FT E +  TP+
Sbjct: 1   MIEQLFPEVTCYALRYLDYSSLCQLSMTSSSMRKTANDDVLWRALYFQEFTEETNGGTPV 60

Query: 175 NGWKAYYAATRTIMNINAQFYNIIRDRSLQAMSHFWLNADYVKCIHASGEFFSGY 230
           NGWKA++A T+ +M +N +F++I+  RSL  M+  WLN+DYVKC + SGE F+GY
Sbjct: 61  NGWKAFFAVTKQVMTVNDKFFSILDSRSLPRMTSLWLNSDYVKCFNGSGELFTGY 115

[Close]

BLAST of Carg11444 vs. ExPASy TrEMBL
Match: A0A6J1EUJ3 (F-box protein SKIP8-like OS=Cucurbita moschata OX=3662 GN=LOC111437693 PE=4 SV=1)

HSP 1 Score: 625.9 bits (1613), Expect = 8.8e-176
Identity = 313/313 (100.00%), Postives = 313/313 (100.00%), Query Frame = 0


Query: 1   MEIASAATIALLSQPFPIAAIVTFLCFLLALFAAVRLVSVPYIRRTKTVQLEGVGTRNFN 60
           MEIASAATIALLSQPFPIAAIVTFLCFLLALFAAVRLVSVPYIRRTKTVQLEGVGTRNFN
Sbjct: 1   MEIASAATIALLSQPFPIAAIVTFLCFLLALFAAVRLVSVPYIRRTKTVQLEGVGTRNFN 60

Query: 61  CTCSLNGGVAIGGLNPRAEITSSTSTSMPYLNGRAVEVLEKAPVVVTERQTGASMMEQLV 120
           CTCSLNGGVAIGGLNPRAEITSSTSTSMPYLNGRAVEVLEKAPVVVTERQTGASMMEQLV
Sbjct: 61  CTCSLNGGVAIGGLNPRAEITSSTSTSMPYLNGRAVEVLEKAPVVVTERQTGASMMEQLV 120

Query: 121 PEITTHALSYLDYPSLCRLSMTNSLMRKAANDDSAWKALYHKDFTLEQDTVTPINGWKAY 180
           PEITTHALSYLDYPSLCRLSMTNSLMRKAANDDSAWKALYHKDFTLEQDTVTPINGWKAY
Sbjct: 121 PEITTHALSYLDYPSLCRLSMTNSLMRKAANDDSAWKALYHKDFTLEQDTVTPINGWKAY 180

Query: 181 YAATRTIMNINAQFYNIIRDRSLQAMSHFWLNADYVKCIHASGEFFSGYNAVIQSWQVAF 240
           YAATRTIMNINAQFYNIIRDRSLQAMSHFWLNADYVKCIHASGEFFSGYNAVIQSWQVAF
Sbjct: 181 YAATRTIMNINAQFYNIIRDRSLQAMSHFWLNADYVKCIHASGEFFSGYNAVIQSWQVAF 240

Query: 241 NWEQGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNIYEFHNGRWYMVHHHSSVM 300
           NWEQGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNIYEFHNGRWYMVHHHSSVM
Sbjct: 241 NWEQGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNIYEFHNGRWYMVHHHSSVM 300

Query: 301 LIVGEMEQQMVHG 314
           LIVGEMEQQMVHG
Sbjct: 301 LIVGEMEQQMVHG 313

[Close]

BLAST of Carg11444 vs. ExPASy TrEMBL
Match: A0A6J1JB95 (F-box protein SKIP8 OS=Cucurbita maxima OX=3661 GN=LOC111483424 PE=4 SV=1)

HSP 1 Score: 621.7 bits (1602), Expect = 1.7e-174
Identity = 311/313 (99.36%), Postives = 311/313 (99.36%), Query Frame = 0


Query: 1   MEIASAATIALLSQPFPIAAIVTFLCFLLALFAAVRLVSVPYIRRTKTVQLEGVGTRNFN 60
           MEIASAATIALLSQPFPIAAIVTFLCFLLALFAAVRLVSVPYIRRT TVQLEGVGTRNFN
Sbjct: 1   MEIASAATIALLSQPFPIAAIVTFLCFLLALFAAVRLVSVPYIRRTTTVQLEGVGTRNFN 60

Query: 61  CTCSLNGGVAIGGLNPRAEITSSTSTSMPYLNGRAVEVLEKAPVVVTERQTGASMMEQLV 120
           CTCSLNGGVAIGGLNPRAEITSSTSTSMPYLNG AVEVLEKAPVVVTERQTGASMMEQLV
Sbjct: 61  CTCSLNGGVAIGGLNPRAEITSSTSTSMPYLNGHAVEVLEKAPVVVTERQTGASMMEQLV 120

Query: 121 PEITTHALSYLDYPSLCRLSMTNSLMRKAANDDSAWKALYHKDFTLEQDTVTPINGWKAY 180
           PEITTHALSYLDYPSLCRLSMTNSLMRKAANDDSAWKALYHKDFTLEQDTVTPINGWKAY
Sbjct: 121 PEITTHALSYLDYPSLCRLSMTNSLMRKAANDDSAWKALYHKDFTLEQDTVTPINGWKAY 180

Query: 181 YAATRTIMNINAQFYNIIRDRSLQAMSHFWLNADYVKCIHASGEFFSGYNAVIQSWQVAF 240
           YAATRTIMNINAQFYNIIRDRSLQAMSHFWLNADYVKCIHASGEFFSGYNAVIQSWQVAF
Sbjct: 181 YAATRTIMNINAQFYNIIRDRSLQAMSHFWLNADYVKCIHASGEFFSGYNAVIQSWQVAF 240

Query: 241 NWEQGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNIYEFHNGRWYMVHHHSSVM 300
           NWEQGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNIYEFHNGRWYMVHHHSSVM
Sbjct: 241 NWEQGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNIYEFHNGRWYMVHHHSSVM 300

Query: 301 LIVGEMEQQMVHG 314
           LIVGEMEQQMVHG
Sbjct: 301 LIVGEMEQQMVHG 313

[Close]

BLAST of Carg11444 vs. ExPASy TrEMBL
Match: A0A0A0KX34 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G052690 PE=4 SV=1)

HSP 1 Score: 597.4 bits (1539), Expect = 3.4e-167
Identity = 297/313 (94.89%), Postives = 304/313 (97.12%), Query Frame = 0


Query: 1   MEIASAATIALLSQPFPIAAIVTFLCFLLALFAAVRLVSVPYIRRTKTVQLEGVGTRNFN 60
           MEI S+ATIAL SQPFPIAAIVTFLCFLLA+F AVRLVSVPYIRRTKT+Q E VGTRN N
Sbjct: 1   MEIVSSATIALSSQPFPIAAIVTFLCFLLAIFVAVRLVSVPYIRRTKTLQSESVGTRNCN 60

Query: 61  CTCSLNGGVAIGGLNPRAEITSSTSTSMPYLNGRAVEVLEKAPVVVTERQTGASMMEQLV 120
           CTCSLNGGV I GL+PRAEITSSTSTSMPYLNGRAVEVLEKAPVVVTERQTGASMMEQLV
Sbjct: 61  CTCSLNGGVVIRGLDPRAEITSSTSTSMPYLNGRAVEVLEKAPVVVTERQTGASMMEQLV 120

Query: 121 PEITTHALSYLDYPSLCRLSMTNSLMRKAANDDSAWKALYHKDFTLEQDTVTPINGWKAY 180
           PEITTHALSYLDYPSLCRLSMTNSLMRKAANDD+AWKALYHKDFTLEQDTVTPINGWK+Y
Sbjct: 121 PEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDTVTPINGWKSY 180

Query: 181 YAATRTIMNINAQFYNIIRDRSLQAMSHFWLNADYVKCIHASGEFFSGYNAVIQSWQVAF 240
           YAATRTIMNINAQFYNIIRDRSLQAMS FWLNADYVKCIHASGEFFSGYNAV+QSWQVAF
Sbjct: 181 YAATRTIMNINAQFYNIIRDRSLQAMSRFWLNADYVKCIHASGEFFSGYNAVVQSWQVAF 240

Query: 241 NWEQGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNIYEFHNGRWYMVHHHSSVM 300
           NWEQGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNIYEFHNGRWYMVHHHSSVM
Sbjct: 241 NWEQGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNIYEFHNGRWYMVHHHSSVM 300

Query: 301 LIVGEMEQQMVHG 314
           LIVGEMEQQMVHG
Sbjct: 301 LIVGEMEQQMVHG 313

[Close]

BLAST of Carg11444 vs. ExPASy TrEMBL
Match: A0A5A7TU63 (F-box protein SKIP8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G003610 PE=4 SV=1)

HSP 1 Score: 594.3 bits (1531), Expect = 2.9e-166
Identity = 296/313 (94.57%), Postives = 304/313 (97.12%), Query Frame = 0


Query: 1   MEIASAATIALLSQPFPIAAIVTFLCFLLALFAAVRLVSVPYIRRTKTVQLEGVGTRNFN 60
           MEI S+ATIAL SQPFPIAAIVTFLCFLLA+F AVRLVSVPYIRRTK++Q E VGTRN N
Sbjct: 1   MEIVSSATIALSSQPFPIAAIVTFLCFLLAIFVAVRLVSVPYIRRTKSLQSESVGTRNCN 60

Query: 61  CTCSLNGGVAIGGLNPRAEITSSTSTSMPYLNGRAVEVLEKAPVVVTERQTGASMMEQLV 120
           CTCSLNGGV I GL+PRAEITSSTSTSMPYLNGRAVEVLEKAPVVVTERQTGASMMEQLV
Sbjct: 61  CTCSLNGGVVIRGLDPRAEITSSTSTSMPYLNGRAVEVLEKAPVVVTERQTGASMMEQLV 120

Query: 121 PEITTHALSYLDYPSLCRLSMTNSLMRKAANDDSAWKALYHKDFTLEQDTVTPINGWKAY 180
           PEITTHALSYLDYPSLCRLSMTNSLMRKAANDD+AWKALYHKDFTLEQDTVTPINGWK+Y
Sbjct: 121 PEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDTVTPINGWKSY 180

Query: 181 YAATRTIMNINAQFYNIIRDRSLQAMSHFWLNADYVKCIHASGEFFSGYNAVIQSWQVAF 240
           YAATRTIMNINAQFYNIIRDRSLQAMS FWLNADYVKCIHASGEFFSGYNAVIQSWQVAF
Sbjct: 181 YAATRTIMNINAQFYNIIRDRSLQAMSRFWLNADYVKCIHASGEFFSGYNAVIQSWQVAF 240

Query: 241 NWEQGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNIYEFHNGRWYMVHHHSSVM 300
           NWEQGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNIYEFH+GRWYMVHHHSSVM
Sbjct: 241 NWEQGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNIYEFHDGRWYMVHHHSSVM 300

Query: 301 LIVGEMEQQMVHG 314
           LIVGEMEQQMVHG
Sbjct: 301 LIVGEMEQQMVHG 313

[Close]

BLAST of Carg11444 vs. ExPASy TrEMBL
Match: A0A1S3BTF9 (F-box protein SKIP8 OS=Cucumis melo OX=3656 GN=LOC103493084 PE=4 SV=1)

HSP 1 Score: 594.0 bits (1530), Expect = 3.7e-166
Identity = 295/313 (94.25%), Postives = 304/313 (97.12%), Query Frame = 0


Query: 1   MEIASAATIALLSQPFPIAAIVTFLCFLLALFAAVRLVSVPYIRRTKTVQLEGVGTRNFN 60
           MEI S+ATIAL SQPFPIAAI+TFLCFLLA+F AVRLVSVPYIRRTK++Q E VGTRN N
Sbjct: 1   MEIVSSATIALSSQPFPIAAIITFLCFLLAIFVAVRLVSVPYIRRTKSLQSESVGTRNCN 60

Query: 61  CTCSLNGGVAIGGLNPRAEITSSTSTSMPYLNGRAVEVLEKAPVVVTERQTGASMMEQLV 120
           CTCSLNGGV I GL+PRAEITSSTSTSMPYLNGRAVEVLEKAPVVVTERQTGASMMEQLV
Sbjct: 61  CTCSLNGGVVIRGLDPRAEITSSTSTSMPYLNGRAVEVLEKAPVVVTERQTGASMMEQLV 120

Query: 121 PEITTHALSYLDYPSLCRLSMTNSLMRKAANDDSAWKALYHKDFTLEQDTVTPINGWKAY 180
           PEITTHALSYLDYPSLCRLSMTNSLMRKAANDD+AWKALYHKDFTLEQDTVTPINGWK+Y
Sbjct: 121 PEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDTVTPINGWKSY 180

Query: 181 YAATRTIMNINAQFYNIIRDRSLQAMSHFWLNADYVKCIHASGEFFSGYNAVIQSWQVAF 240
           YAATRTIMNINAQFYNIIRDRSLQAMS FWLNADYVKCIHASGEFFSGYNAVIQSWQVAF
Sbjct: 181 YAATRTIMNINAQFYNIIRDRSLQAMSRFWLNADYVKCIHASGEFFSGYNAVIQSWQVAF 240

Query: 241 NWEQGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNIYEFHNGRWYMVHHHSSVM 300
           NWEQGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNIYEFH+GRWYMVHHHSSVM
Sbjct: 241 NWEQGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNIYEFHDGRWYMVHHHSSVM 300

Query: 301 LIVGEMEQQMVHG 314
           LIVGEMEQQMVHG
Sbjct: 301 LIVGEMEQQMVHG 313

[Close]

BLAST of Carg11444 vs. TAIR 10
Match: AT4G10925.1 (Nuclear transport factor 2 (NTF2) family protein )

HSP 1 Score: 338.2 bits (866), Expect = 7.1e-93
Identity = 162/247 (65.59%), Postives = 191/247 (77.33%), Query Frame = 0


Query: 66  NGGVAIGGLNPRAEITSSTSTSMPYLNGRAVEVLEKAPVVVTERQTGASMMEQLVPEITT 125
           NGG    G   R  +T+ST                     V + + G SMMEQLVPEITT
Sbjct: 8   NGGTPPMGGGERTTVTTST---------------------VADDKPGVSMMEQLVPEITT 67

Query: 126 HALSYLDYPSLCRLSMTNSLMRKAANDDSAWKALYHKDFTLEQDTVTPINGWKAYYAATR 185
           HALSYLDYPSLCRLSMTNSLMRKAANDD+AWKALYHKDFTLEQD +TP+NGWK YYA TR
Sbjct: 68  HALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDGITPVNGWKEYYATTR 127

Query: 186 TIMNINAQFYNIIRDRSLQAMSHFWLNADYVKCIHASGEFFSGYNAVIQSWQVAFNWEQG 245
            I+++N +F+ IIRDR+LQAM+  WLN+DYVKCIHASGE FSGYN VIQSWQ+ FNWEQG
Sbjct: 128 AIISVNTEFFTIIRDRALQAMARLWLNSDYVKCIHASGELFSGYNEVIQSWQLCFNWEQG 187

Query: 246 INFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNIYEFHNGRWYMVHHHSSVMLIVGE 305
            +FQV  VR R+LTDMAWV+MK Y+++D GPF +TN++EFHNGRW+MVHHHSSVMLI  +
Sbjct: 188 FDFQVHTVRTRILTDMAWVTMKAYLNVDGGPFLITNVFEFHNGRWHMVHHHSSVMLI--D 231

Query: 306 MEQQMVH 313
            +Q +VH
Sbjct: 248 DQQVVVH 231

[Close]

BLAST of Carg11444 vs. TAIR 10
Match: AT4G10925.2 (Nuclear transport factor 2 (NTF2) family protein )

HSP 1 Score: 338.2 bits (866), Expect = 7.1e-93
Identity = 162/247 (65.59%), Postives = 191/247 (77.33%), Query Frame = 0


Query: 66  NGGVAIGGLNPRAEITSSTSTSMPYLNGRAVEVLEKAPVVVTERQTGASMMEQLVPEITT 125
           NGG    G   R  +T+ST                     V + + G SMMEQLVPEITT
Sbjct: 8   NGGTPPMGGGERTTVTTST---------------------VADDKPGVSMMEQLVPEITT 67

Query: 126 HALSYLDYPSLCRLSMTNSLMRKAANDDSAWKALYHKDFTLEQDTVTPINGWKAYYAATR 185
           HALSYLDYPSLCRLSMTNSLMRKAANDD+AWKALYHKDFTLEQD +TP+NGWK YYA TR
Sbjct: 68  HALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDGITPVNGWKEYYATTR 127

Query: 186 TIMNINAQFYNIIRDRSLQAMSHFWLNADYVKCIHASGEFFSGYNAVIQSWQVAFNWEQG 245
            I+++N +F+ IIRDR+LQAM+  WLN+DYVKCIHASGE FSGYN VIQSWQ+ FNWEQG
Sbjct: 128 AIISVNTEFFTIIRDRALQAMARLWLNSDYVKCIHASGELFSGYNEVIQSWQLCFNWEQG 187

Query: 246 INFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNIYEFHNGRWYMVHHHSSVMLIVGE 305
            +FQV  VR R+LTDMAWV+MK Y+++D GPF +TN++EFHNGRW+MVHHHSSVMLI  +
Sbjct: 188 FDFQVHTVRTRILTDMAWVTMKAYLNVDGGPFLITNVFEFHNGRWHMVHHHSSVMLI--D 231

Query: 306 MEQQMVH 313
            +Q +VH
Sbjct: 248 DQQVVVH 231

[Close]

BLAST of Carg11444 vs. TAIR 10
Match: AT4G10925.3 (Nuclear transport factor 2 (NTF2) family protein )

HSP 1 Score: 338.2 bits (866), Expect = 7.1e-93
Identity = 162/247 (65.59%), Postives = 191/247 (77.33%), Query Frame = 0


Query: 66  NGGVAIGGLNPRAEITSSTSTSMPYLNGRAVEVLEKAPVVVTERQTGASMMEQLVPEITT 125
           NGG    G   R  +T+ST                     V + + G SMMEQLVPEITT
Sbjct: 8   NGGTPPMGGGERTTVTTST---------------------VADDKPGVSMMEQLVPEITT 67

Query: 126 HALSYLDYPSLCRLSMTNSLMRKAANDDSAWKALYHKDFTLEQDTVTPINGWKAYYAATR 185
           HALSYLDYPSLCRLSMTNSLMRKAANDD+AWKALYHKDFTLEQD +TP+NGWK YYA TR
Sbjct: 68  HALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDGITPVNGWKEYYATTR 127

Query: 186 TIMNINAQFYNIIRDRSLQAMSHFWLNADYVKCIHASGEFFSGYNAVIQSWQVAFNWEQG 245
            I+++N +F+ IIRDR+LQAM+  WLN+DYVKCIHASGE FSGYN VIQSWQ+ FNWEQG
Sbjct: 128 AIISVNTEFFTIIRDRALQAMARLWLNSDYVKCIHASGELFSGYNEVIQSWQLCFNWEQG 187

Query: 246 INFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNIYEFHNGRWYMVHHHSSVMLIVGE 305
            +FQV  VR R+LTDMAWV+MK Y+++D GPF +TN++EFHNGRW+MVHHHSSVMLI  +
Sbjct: 188 FDFQVHTVRTRILTDMAWVTMKAYLNVDGGPFLITNVFEFHNGRWHMVHHHSSVMLI--D 231

Query: 306 MEQQMVH 313
            +Q +VH
Sbjct: 248 DQQVVVH 231

[Close]

BLAST of Carg11444 vs. TAIR 10
Match: AT4G23960.1 (F-box family protein )

HSP 1 Score: 150.6 bits (379), Expect = 2.1e-36
Identity = 66/115 (57.39%), Postives = 89/115 (77.39%), Query Frame = 0


Query: 115 MMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDSAWKALYHKDFTLEQDTVTPI 174
           M+EQL PE+T +AL YLDY SLC+LSMT+S MRK ANDD  W+ALY ++FT E +  TP+
Sbjct: 1   MIEQLFPEVTCYALRYLDYSSLCQLSMTSSSMRKTANDDVLWRALYFQEFTEETNGGTPV 60

Query: 175 NGWKAYYAATRTIMNINAQFYNIIRDRSLQAMSHFWLNADYVKCIHASGEFFSGY 230
           NGWKA++A T+ +M +N +F++I+  RSL  M+  WLN+DYVKC + SGE F+GY
Sbjct: 61  NGWKAFFAVTKQVMTVNDKFFSILDSRSLPRMTSLWLNSDYVKCFNGSGELFTGY 115

The following BLAST results are available for this feature:

BLAST of Carg11444 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022931549.1	1.8e-175	100.00	F-box protein SKIP8-like [Cucurbita moschata] >XP_023553511.1 F-box protein SKIP...	[more]
XP_022985415.1	3.4e-174	99.36	F-box protein SKIP8 [Cucurbita maxima]	[more]
XP_004149013.1	7.0e-167	94.89	F-box protein SKIP8 [Cucumis sativus] >KGN53419.1 hypothetical protein Csa_01522...	[more]
XP_038880969.1	9.1e-167	95.21	F-box protein SKIP8-like [Benincasa hispida]	[more]
KAA0044925.1	5.9e-166	94.57	F-box protein SKIP8 [Cucumis melo var. makuwa] >TYK16545.1 F-box protein SKIP8 [...	[more]

BLAST of Carg11444 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q93YV9	1.0e-91	65.59	F-box protein SKIP8 OS=Arabidopsis thaliana OX=3702 GN=SKIP8 PE=1 SV=1	[more]
Q9T0B0	3.0e-35	57.39	Probable F-box protein At4g23960 OS=Arabidopsis thaliana OX=3702 GN=At4g23960 PE...	[more]

BLAST of Carg11444 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EUJ3	8.8e-176	100.00	F-box protein SKIP8-like OS=Cucurbita moschata OX=3662 GN=LOC111437693 PE=4 SV=1	[more]
A0A6J1JB95	1.7e-174	99.36	F-box protein SKIP8 OS=Cucurbita maxima OX=3661 GN=LOC111483424 PE=4 SV=1	[more]
A0A0A0KX34	3.4e-167	94.89	F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G052690 PE=4 ...	[more]
A0A5A7TU63	2.9e-166	94.57	F-box protein SKIP8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G0...	[more]
A0A1S3BTF9	3.7e-166	94.25	F-box protein SKIP8 OS=Cucumis melo OX=3656 GN=LOC103493084 PE=4 SV=1	[more]

BLAST of Carg11444 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G10925.1	7.1e-93	65.59	Nuclear transport factor 2 (NTF2) family protein	[more]
AT4G10925.2	7.1e-93	65.59	Nuclear transport factor 2 (NTF2) family protein	[more]
AT4G10925.3	7.1e-93	65.59	Nuclear transport factor 2 (NTF2) family protein	[more]
AT4G23960.1	2.1e-36	57.39	F-box family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.20.1280.50		coord: 104..157 e-value: 4.0E-7 score: 31.7
None	No IPR available	GENE3D	3.10.450.50		coord: 178..309 e-value: 4.7E-33 score: 116.1
IPR037401	SnoaL-like domain	PFAM	PF13474	SnoaL_3	coord: 187..300 e-value: 1.1E-26 score: 93.6
IPR044260	F-box protein SKIP8-like	PANTHER	PTHR47124	F-BOX PROTEIN SKIP8	coord: 11..313
IPR001810	F-box domain	PROSITE	PS50181	FBOX	coord: 113..159 score: 8.59666
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 112..186
IPR032710	NTF2-like domain superfamily	SUPERFAMILY	54427	NTF2-like	coord: 182..300

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg11444-RA	Carg11444-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005515	protein binding