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Carg11362 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGCTGTGCTGGATCGTCGCAGACCAACGGGGACGGTGAGGTTCACTTCGCTTCTCTGGTTCTTTTTTTTCTCTTTCTAAATTCTCGGCGAAATTTTGTTCTATGTTCGTCTGTTGACTTTGGCTACTAGGAATATTAGATGATAATCAATGCAAGTTGATTTGCTGTGGTAGGGAGAGCGGGAGTGTTGGTCTAGTAGTATTGAATTTCTCGGTAATGAATTGGATTGCTCTTGATTTTATTTATTCTGTCATAGCGTTGCTTGATGGTGTTCGTAAGTTTGTCCTGTGTGTTGTGACTGTGACGGGAGATTCTTGAACTTCACTTGCGATTATCAGATTATGTAGTGGTGCATTAATTAGGATGAGCAGCTCTCTGATTTGGAGTATTGCACTAGTTCATGGAAATAGTTTTGTTATTCATTCATTTTGAGAGTGACGGGTTTTTGAAGGTTGCTTAGAGTTATTGCTCACTGGTTCATTTGAGATTTCATGCTGGTGATTCAAATTCCGCTACAGATTAATGCTTTCAGATTAATGAAGTTATCAAGATTTGTAGTCGGAATCTTGGCATATTTGTTGCTTAACTAGTTTCACATTCCGAGAGTTCTATTAGATTAATTGTGAAGCTGTGATGTTAGCATTCCAGGACTAAAATTTCAGCAACTAACACTTAAATGGACAGTATCTTATATTTCTGCTTTATACTTGTAACACCCCAGATCGCTAGCAGATATTGTCTTTTTTGGGCTTTCCCTTTCGAGCTTCCCCTCAAGGCTTTAAAACGTGTCTACTAGGAGAAGGTTTCCACACCCTTATAAATGGTGGTTTGTTCTCCTCCCCAACCAATGTGGAACATCACAATGCTGCAATCAAAAGAAATAATAGCGTTTTTAGAGGGATTGAGAGCTTTTTGATGTCTGGTCCCTTGTGAGATTGAATGTCTCTCTTTTGGCAGCAGTTACAAGTTTTTTTTTTTTGTAATAATTTTTAGAGGGATTGAGAGAGAGTCTTTTGATGATTGGTCCATTGTGAGATTTAATGTCTCCCTTTAGGTGGCGGTGACGAGTTTCTTTCGTAATAGTTTTTAGAGGGGTCGAGAGGAAGTCGTCTTCTGATGTTTGGTCCATTAAAAGATTTAATGTCTCTCTTTGGGCGGCAGAGACGAGCTCCTTTTGTAATTACTCTCTTTATGGGCTTGTTTTGTGGAGAGTTGATTTTCATTTGACTCTTTTCTACATGAAAAATGTCTAAGGTAATAGTTGTACGTGAAAATTCCTCCCTTTCCCTCTTTAATCTCATAACAAATACTTACAAATGACAGGAATTGTTGATCTTCTTGTTTGTTTTTAAAGAAAACACTTGAGGATACTGAAATGGAAAAGAAGCACTTCAAAAGAGTGAAGAAAAGGATAGAGAAAATAGCAAAATTTTAGGACGAACTTTTGTAATTCTCCTTGTTGTTTATAGTTCTGAATGTCTTACGGATTTCATTTAAACTTTTCAAGACTACCATGCTGCTAGCCTTGAATCTGGTTTTGTTGGTTTATACTTGATTCAAGCCATTGAGATATGACTGAAATTGTTTCTTTATGTAGGTTCCATAAAGAAAATACGCAAGCCAAAATCTTGGAAGCATCCTCAGCCAATTACAAGGTCTCAGCTTGTGCAACTGCGGGAGGAGTTCTGGGACACTGCACCTCACTATGGTGGCCGAAAAGGTAGGCCTGTCTCTAAATATTTTTTGCCAGTGTGTTTATTAGAGGTTAGCTTATCAAAAAAGTTACTAAGAGTTTATTTAGTTAGGAATAGCTCATGATCTTCCACTAAATTAACCAATGTGGGACTTACTCCCAATAATCCTCAACACATTCAATCCATGGAAAAGGCGACTGCATGGTGTAGTTGCAGGGGACCCAATAAAGGTTGGGATGAATTATCCCTTGGAAACAACTATGATACCTTTCACAGCTATAAGAACAGTTAATCAATTTCCAATAAAGGTTGGGATGAATTATCCCTTGGAAACAACTATGATATCTTTCACAGCTATAAGAACAGTTAATCAATTTCCAATTTCTAGGATCCTTCGATTGTTTTTCCTGTTTCCTAATAAACTAAGTTCTTCGGTTTGGAGAGACGAGGTTTCCTATTTTTATGCCGAATCCAGATTGCCATTGCCAACATCGAAGAATCTCGTTCCATGTGTAGGCTTCTCCAATTGTTTCATTTTGCTTTCTGGGAAGAAATGTGATATAGGGAGTTTTTGGTATAATTGATTCATGTTTTTTTATTACATGGTTATTTATTAATTATGCTATGAATGTTGGCTCTTGGATGTTGACATCTTTCAAATCAATTTAACTTCTTTTTCTCAGGCTTGGAGCCATTATGTTATATTCTTACCTAGGATTATGGAATGTGATTAACTAGAAAGTCTTATTGTCCACTTTGAGCATAAGCTCTCATGGCTTTGCTTTGGGCTTCCCCAAAGGCCTCATACGGTATTCCCCACTTATAAACCCATAATCTTTTACGAAATTAACCAATATGGGACTCATGGGACTCATGGGACTCATTCCCAACAATCATTCCCTCAAACAAAGTACACTATAAGCAACCCCTTAATCATAATCTTTCTCATGAACTCATAACAATCATTCCCTCGAATATGGCAACCCCTTAATCATAATCTTTCACGAAATTAACCAATATGGGACTCATGGGACTCATTCCCAACAATCATTCCCTCGAACAAAGTACACTATAAGCAACCCCTTAATCGAGGCTCGACTCCTTTTTCTGGGGCCCTCAAACAAAGTACACCCTTTGTTCGACACTTTAGAGACTCACAATCTATTGACATGGTTAAGTTTAGGGCATGACTTTGCTTTGGGCTTCCTCAAAAGGCCTCGATGGAGATAGTATTCCCCACTTATAAACCCATGATCTTCTACTAAATTAACCAATATGGGACTCACTCCCAATAATCCTCAACAGTATCTATACGAAGGTTTCTAATACACGGCACAAATTTCTGTTAATTTTCATTTTTCACTTTCATTAATTGACTTTAGTCGATAAGGAGCTTTGGGTCTAGCATTTCAGGTGCGGATTGTTTCAAAATTTGAATATTGAACTGATGTAGCATTTTGTACCAAAAATCAAATGAGAAAAAGATGATTGGCCATATACGAGCCTTGCAGTAAAGAGAACACTAGTATAATTGAAAGGGCATCTTTAGGCCATGACATACCCCCTCCAAGTTAACATCGACTTCAACCTTCTTATACATTCCTTTTTCCTTTACTAACTGTTTTTTGTTACCAGAGATTTGGGACGCACTACGAGCAGCTGCCGAAGCCGAGCTTTCCCTTGCGCAAGCCATCATAGACAGTGCAGGGGTAATCATCCAAAATGCAGATTTGACAATCTGTTACGACGAGAGAGGTCCATACCATTGCTTCATTTAAGAAATTATGATACGTTAGTCATCGGTATCGTTTTACCATTGCTCAATCTTACTGCAGGCGCAAAATATGAACTACCCAACTATGTTTTGAGTGAGCCAACCAATTTGATTCGTGACAGTTCATAAAGAGGTAACCATAACTTCGTTTCTGCTCTAGCTGAAATCACACAGGTCTGAATAATGCTTGCTTTTGAAAGGTTTCATTTTGGTCCTTAATACAAACATACAT ATGGGCTGTGCTGGATCGTCGCAGACCAACGGGGACGGTTCCATAAAGAAAATACGCAAGCCAAAATCTTGGAAGCATCCTCAGCCAATTACAAGGTCTCAGCTTGTGCAACTGCGGGAGGAGTTCTGGGACACTGCACCTCACTATGAGATTTGGGACGCACTACGAGCAGCTGCCGAAGCCGAGCTTTCCCTTGCGCAAGCCATCATAGACAGTGCAGGGGTAATCATCCAAAATGCAGATTTGACAATCTGTTACGACGAGAGAGGCGCAAAATATGAACTACCCAACTATGTTTTGAGTGAGCCAACCAATTTGATTCGTGACAGTTCATAAAGAGGTAACCATAACTTCGTTTCTGCTCTAGCTGAAATCACACAGGTCTGAATAATGCTTGCTTTTGAAAGGTTTCATTTTGGTCCTTAATACAAACATACAT ATGGGCTGTGCTGGATCGTCGCAGACCAACGGGGACGGTTCCATAAAGAAAATACGCAAGCCAAAATCTTGGAAGCATCCTCAGCCAATTACAAGGTCTCAGCTTGTGCAACTGCGGGAGGAGTTCTGGGACACTGCACCTCACTATGAGATTTGGGACGCACTACGAGCAGCTGCCGAAGCCGAGCTTTCCCTTGCGCAAGCCATCATAGACAGTGCAGGGGTAATCATCCAAAATGCAGATTTGACAATCTGTTACGACGAGAGAGGCGCAAAATATGAACTACCCAACTATGTTTTGAGTGAGCCAACCAATTTGATTCGTGACAGTTCATAA MGCAGSSQTNGDGSIKKIRKPKSWKHPQPITRSQLVQLREEFWDTAPHYEIWDALRAAAEAELSLAQAIIDSAGVIIQNADLTICYDERGAKYELPNYVLSEPTNLIRDSS Homology
BLAST of Carg11362 vs. NCBI nr
Match: KAG7015051.1 (Ubiquitin domain-containing protein 2, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 227.6 bits (579), Expect = 5.1e-56 Identity = 111/111 (100.00%), Postives = 111/111 (100.00%), Query Frame = 0
BLAST of Carg11362 vs. NCBI nr
Match: XP_022931411.1 (ubiquitin domain-containing protein 2-like [Cucurbita moschata]) HSP 1 Score: 221.9 bits (564), Expect = 2.8e-54 Identity = 111/115 (96.52%), Postives = 111/115 (96.52%), Query Frame = 0
BLAST of Carg11362 vs. NCBI nr
Match: XP_023552879.1 (ubiquitin domain-containing protein 2-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 219.2 bits (557), Expect = 1.8e-53 Identity = 110/115 (95.65%), Postives = 110/115 (95.65%), Query Frame = 0
BLAST of Carg11362 vs. NCBI nr
Match: XP_038882682.1 (ubiquitin domain-containing protein 2-like [Benincasa hispida] >XP_038882691.1 ubiquitin domain-containing protein 2-like [Benincasa hispida] >XP_038882701.1 ubiquitin domain-containing protein 2-like [Benincasa hispida] >XP_038882708.1 ubiquitin domain-containing protein 2-like [Benincasa hispida]) HSP 1 Score: 219.2 bits (557), Expect = 1.8e-53 Identity = 108/115 (93.91%), Postives = 111/115 (96.52%), Query Frame = 0
BLAST of Carg11362 vs. NCBI nr
Match: XP_022984742.1 (ubiquitin domain-containing protein 2-like [Cucurbita maxima]) HSP 1 Score: 216.5 bits (550), Expect = 1.2e-52 Identity = 108/115 (93.91%), Postives = 109/115 (94.78%), Query Frame = 0
BLAST of Carg11362 vs. ExPASy Swiss-Prot
Match: Q6DG43 (Ubiquitin domain-containing protein 2 OS=Danio rerio OX=7955 GN=ubtd2 PE=2 SV=1) HSP 1 Score: 97.1 bits (240), Expect = 1.4e-19 Identity = 58/124 (46.77%), Postives = 73/124 (58.87%), Query Frame = 0
BLAST of Carg11362 vs. ExPASy Swiss-Prot
Match: Q6PGH0 (Ubiquitin domain-containing protein 2 OS=Mus musculus OX=10090 GN=Ubtd2 PE=2 SV=1) HSP 1 Score: 95.1 bits (235), Expect = 5.2e-19 Identity = 58/125 (46.40%), Postives = 74/125 (59.20%), Query Frame = 0
BLAST of Carg11362 vs. ExPASy Swiss-Prot
Match: Q4V8W7 (Ubiquitin domain-containing protein 1 OS=Danio rerio OX=7955 GN=ubtd1 PE=2 SV=1) HSP 1 Score: 94.7 bits (234), Expect = 6.8e-19 Identity = 60/132 (45.45%), Postives = 76/132 (57.58%), Query Frame = 0
BLAST of Carg11362 vs. ExPASy Swiss-Prot
Match: Q640W6 (Ubiquitin domain-containing protein 1 OS=Xenopus laevis OX=8355 GN=ubtd1 PE=2 SV=1) HSP 1 Score: 94.4 bits (233), Expect = 8.9e-19 Identity = 58/125 (46.40%), Postives = 74/125 (59.20%), Query Frame = 0
BLAST of Carg11362 vs. ExPASy Swiss-Prot
Match: Q5EAE3 (Ubiquitin domain-containing protein 2 OS=Bos taurus OX=9913 GN=UBTD2 PE=2 SV=1) HSP 1 Score: 94.0 bits (232), Expect = 1.2e-18 Identity = 54/115 (46.96%), Postives = 68/115 (59.13%), Query Frame = 0
BLAST of Carg11362 vs. ExPASy TrEMBL
Match: A0A6J1ETK8 (ubiquitin domain-containing protein 2-like OS=Cucurbita moschata OX=3662 GN=LOC111437602 PE=4 SV=1) HSP 1 Score: 221.9 bits (564), Expect = 1.4e-54 Identity = 111/115 (96.52%), Postives = 111/115 (96.52%), Query Frame = 0
BLAST of Carg11362 vs. ExPASy TrEMBL
Match: A0A6J1J306 (ubiquitin domain-containing protein 2-like OS=Cucurbita maxima OX=3661 GN=LOC111482928 PE=4 SV=1) HSP 1 Score: 216.5 bits (550), Expect = 5.7e-53 Identity = 108/115 (93.91%), Postives = 109/115 (94.78%), Query Frame = 0
BLAST of Carg11362 vs. ExPASy TrEMBL
Match: A0A0A0KVJ9 (UBD domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G083480 PE=4 SV=1) HSP 1 Score: 213.8 bits (543), Expect = 3.7e-52 Identity = 105/115 (91.30%), Postives = 108/115 (93.91%), Query Frame = 0
BLAST of Carg11362 vs. ExPASy TrEMBL
Match: A0A6J1J725 (ubiquitin domain-containing protein 1-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111481944 PE=4 SV=1) HSP 1 Score: 210.7 bits (535), Expect = 3.1e-51 Identity = 103/115 (89.57%), Postives = 106/115 (92.17%), Query Frame = 0
BLAST of Carg11362 vs. ExPASy TrEMBL
Match: A0A6J1FQA3 (ubiquitin domain-containing protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111447800 PE=4 SV=1) HSP 1 Score: 210.7 bits (535), Expect = 3.1e-51 Identity = 103/115 (89.57%), Postives = 106/115 (92.17%), Query Frame = 0
BLAST of Carg11362 vs. TAIR 10
Match: AT1G53400.1 (Ubiquitin domain-containing protein ) HSP 1 Score: 186.8 bits (473), Expect = 9.4e-48 Identity = 87/110 (79.09%), Postives = 100/110 (90.91%), Query Frame = 0
BLAST of Carg11362 vs. TAIR 10
Match: AT5G45740.1 (Ubiquitin domain-containing protein ) HSP 1 Score: 166.8 bits (421), Expect = 1.0e-41 Identity = 80/115 (69.57%), Postives = 93/115 (80.87%), Query Frame = 0
BLAST of Carg11362 vs. TAIR 10
Match: AT1G16960.1 (Ubiquitin domain-containing protein ) HSP 1 Score: 160.6 bits (405), Expect = 7.2e-40 Identity = 78/112 (69.64%), Postives = 95/112 (84.82%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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