Carg11355 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg11355
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	protein VTE6, chloroplastic-like
Location	Carg_Chr16: 2388536 .. 2391874 (+)
RNA-Seq Expression	Carg11355
Synteny	Carg11355

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAATCAAATTTGAGCTCGGAATTTGTTCTTCCTTGACCAATACACTGCAGAAGATTCCTTCCTCAGATTCTTCGGTATTTAATGGCCACGGCGTTGCTGCCCTCAACTCACCCTTTTCCCCTTCGTTTTTCTCCCACTCCCTCCCCCAAACACCGCCAATTTTCCTCTCTTCCTCTCCCTCCAAAACCCTTAATTCCCAAATCGAACCCTAACCGATCCCTAAAGACGGTGGTGGTTCGAGCCGAGAGCTTGCAGAGCCTTGTATCGGGTGCTGTGAACATCGTCCAATCGAATCCCCCCACGTGGCAATCGGCCTTACTCACTAACCTGCTGATTTTCGTCGCTGGTTCGCCGATTCTGGCCTTGGGATTGTCTGTTTCGGGCATTGCTTCTGCTTTCTTGCTTGGTACTCTCACATGGCGTGCTTTTGGACCCTCTGGTTTCCTTCTTGTTGCTACCTACTTCGTCATTGTTCGTCTATGATCCTTTCTCTTGAAATTCCATTTGAGTTTTGTGTTTGCTTCGTTGATTGATTGATTGATTGGTGGGGTTTCGTTGTTCTCTAGCATTTTTATGGATTGAATTGGCTGTTTTATTGATTGATTGCTGTTCTTCATTGTTGTTGTGATTGAATAATTCTAGTATGCTTGCACCCATCTGTTTAGATGATCAATTAAAGACAAATGGTGTTAAATTCATAGGGGGTTTGGATTGTTTCTGCTTCATAATTGCTTCAGATTATTGTTATGGAATACTTGGATTGTTTTACAGACGTGAATGGATTCTCAAAGTTCTGGATGCACAGCTTTGAGGTTCATTGTCAAGTTGAAGACTAACTGATTGTTATTTCTCTTAAAATTTTCACCTTCTTCAAAGGGCTTCTCTCTCACGTCGGTTGGGGAGGAGAATGAAGTATTCTTTATAAGGGTGTGGAAACTTCTTCCTAGCATACGCGTTTTAAAAACCTTGAGGGAAAGCCGGAAAGGGAAAGGCTAAAGAGGACAATATCGGCTAGCGGTGGACTTGAGCTATTACAAATGGTATTAGAACTAGACACGGGGCGATGTGCCAGCGAGGAGGCTGAGCCCCGAATAGGGGTGGACATGAGGTAGTGTGCCAATAAAGACGTTGGACCTCGAAGAGGGGTGAATTGGGGAGTCCCACATCAATTGGAGAAGAGAACGAGTGCCAGCGAGGACGTTGGGTCCCGAAGGGGGGTGGATTGTGAGATTTTCCACGTTGGTTGGGGAGTAGAATGAAGTACTCTTTACAAGGTGTGGAAACCTCTCCCTAGCATATGCGTTTTAAAAACCTTGAGGGGAAGCCCGAAAGAGAAAGCCTGAAGAGGACAATATGGACTTAAGCGGTTACAAATGGTATTAGAGTCAGACATGGGGCGATGTGCCAGTGAGGAGGCTGAACCCCGAAGGAGGTGGACCCGAGGCGGTGTGCTAGCAAGGACGCTGGGCCCCGAAGGGGGTGGATTGGAGGGTCCCACATCGACTGAAGAAGGGAACGAGTGCTAGCGAGGACGCTGGGCCCTGAAGAGGGGTGGATTGTGAGATCCCACATCGGTTGGAAAGGAGAACGAAACATTCTTTATAAGAGTGTGGAAACCTCTTCCTAGCAGACGCGTTTTAAAAACCTTGAAGAGAAGCCCGAAAGGGAAAGTCTAAAGAGGACAATATCTACTAGCGGTGGGTTTGAGCCGTTACAAATGAACTACCAACATGTTCCTAATCTTGTTCGCTCTTTACATTTACTTTGGTGACTGGAAGCTACAGAACTACCTCTTCCAGCAACGCTAATAACCCTCCTGCTGAAATTCTGTTTCCCAGGGAACAGCTGCAACAAAGGTCAAGATGGCTCAAAAGGAAGCACAAGGGGTAGCTGAAAAGAGAAAAGGAAGAAGAGGACTTGGTAGTGTTATAGGATCCAGTGCTGCTGGTTGTGTGTGTGCTTTGCTCATGATAAACAACATTGGAGGAGAAGCATTCCGACAACTTTGGCGACTTGGTTTTGTTGCCTGTTTCTGTACTAAATTGAGTGATACTGTCTCAAGTGAAATAGGGAAGGCATATGGTCGGATAACGTAAGTAATCCATTCCTTGTCGAACTTGATCAAGCACATATTTTATCTTCTAATCTATCATTTTTCTCGAGTTCGTAGTTTTCAGGAGAATTTTCAAACAATATTGATACAAATAAGGTGTCTTAATCATTCATGTTATTGTCTTGATCAAGCTATCTTGTGGAATGATTCGAATTATGAGTTTAGAAATGAGGTTTCTTTACTCTTGATCTTGATCATCAAGGTAATCCATTCCAAAACTTTCACTTGGGTTGATTCCTTGTCATTTTTGGAGTTTTTGGATAATTTAGATCAAGAGATCTCGTTCTTTAACAAAGTTTTTGGATCGAATCCCAGGAGTTTCATAATAAGTATAGTTTATGTTTTTCAATTCCTCGGATGAACATGTTATGTGTTTCATCGATTCACTGATGATTCATTTCAAATCAGGTACCTGGTGACAACATTTAGGATAGTTCCTCGGGGAACAGAAGGGGCTGTCAGTCTGGAGGGAACCTTTGCTGGACTCTTAGCAGCAAGTGTTCTTGCATTTGTTGGCTGTCTTTTGGGCGACGTAATTATTTCAATCCTTTCCTACTCGTTTCGTATTGCTCGTTCTTTAACAAGGTTTTTAGATCAAATCTCTGTCGACGTTGATGCAGGTAACTGCATCTGAAGCAATTGTATGCGTCGTAGCTTCACAGATAGCTAATCTTGGTGAAAGCATCATTGGTGCTGTGCTTCAAGGGAAGGAGGGATTTCAGTGGGTAAGCAAGTGAAGTTTGTGATCTCTGATTGCCTTAGTTTGATTATGTTAGTTTGTTTATGAGTTGAACTGTTCTTCTGTTATTGCCTGCTCTCATGTAATGTTGGCTTGGTTGGGTCATCACGAACAATGGATTCGAGTGACTCAGCTGAAGGGTCTTGATTGAGCAACTGCTCATTGGTACGAGGTCTTTTAGGCAAAGTCATGAGAGTTTATGTTCAAAGTGGACAATATCATACCATTAGGGAAGTTCGTGGTTTCTAACATGGTATCAGAGTCATACCCTTAACTTAGCTATGGCTATAGAATCCTCAAGTGTCGAATAAAAAAGTTGTGAGTCTCGAAGGTGTAGCCAAACGTGACTTAAGGGTAGAAAAAAGTGTACTTTGTTCGAAGGCTCCAGAGAAGAAGTCGAGTCTCGACTAAGAGGAGGTTGTTCAAGGGCTCCATAGGCCTCAGGGAGGCTATATGGTGTACTTTGTTCGAGGGAAAGATTGTTG

mRNA sequence

AAAAATCAAATTTGAGCTCGGAATTTGTTCTTCCTTGACCAATACACTGCAGAAGATTCCTTCCTCAGATTCTTCGGTATTTAATGGCCACGGCGTTGCTGCCCTCAACTCACCCTTTTCCCCTTCGTTTTTCTCCCACTCCCTCCCCCAAACACCGCCAATTTTCCTCTCTTCCTCTCCCTCCAAAACCCTTAATTCCCAAATCGAACCCTAACCGATCCCTAAAGACGGTGGTGGTTCGAGCCGAGAGCTTGCAGAGCCTTGTATCGGGTGCTGTGAACATCGTCCAATCGAATCCCCCCACGTGGCAATCGGCCTTACTCACTAACCTGCTGATTTTCGTCGCTGGTTCGCCGATTCTGGCCTTGGGATTGTCTGTTTCGGGCATTGCTTCTGCTTTCTTGCTTGGTACTCTCACATGGCGTGCTTTTGGACCCTCTGGTTTCCTTCTTGTTGCTACCTACTTCGTCATTGGAACAGCTGCAACAAAGGTCAAGATGGCTCAAAAGGAAGCACAAGGGGTAGCTGAAAAGAGAAAAGGAAGAAGAGGACTTGGTAGTGTTATAGGATCCAGTGCTGCTGGTTGTGTGTGTGCTTTGCTCATGATAAACAACATTGGAGGAGAAGCATTCCGACAACTTTGGCGACTTGGTTTTGTTGCCTGTTTCTGTACTAAATTGAGTGATACTGTCTCAAGTGAAATAGGGAAGGCATATGGTCGGATAACGTACCTGGTGACAACATTTAGGATAGTTCCTCGGGGAACAGAAGGGGCTGTCAGTCTGGAGGGAACCTTTGCTGGACTCTTAGCAGCAAGTGTTCTTGCATTTGTTGGCTGTCTTTTGGGCGACGTAACTGCATCTGAAGCAATTGTATGCGTCGTAGCTTCACAGATAGCTAATCTTGGTGAAAGCATCATTGGTGCTGTGCTTCAAGGGAAGGAGGGATTTCAGTGGGTAAGCAAGTGAAGTTTGTGATCTCTGATTGCCTTAGTTTGATTATGTTAGTTTGTTTATGAGTTGAACTGTTCTTCTGTTATTGCCTGCTCTCATGTAATGTTGGCTTGGTTGGGTCATCACGAACAATGGATTCGAGTGACTCAGCTGAAGGGTCTTGATTGAGCAACTGCTCATTGGTACGAGGTCTTTTAGGCAAAGTCATGAGAGTTTATGTTCAAAGTGGACAATATCATACCATTAGGGAAGTTCGTGGTTTCTAACATGGTATCAGAGTCATACCCTTAACTTAGCTATGGCTATAGAATCCTCAAGTGTCGAATAAAAAAGTTGTGAGTCTCGAAGGTGTAGCCAAACGTGACTTAAGGGTAGAAAAAAGTGTACTTTGTTCGAAGGCTCCAGAGAAGAAGTCGAGTCTCGACTAAGAGGAGGTTGTTCAAGGGCTCCATAGGCCTCAGGGAGGCTATATGGTGTACTTTGTTCGAGGGAAAGATTGTTG

Coding sequence (CDS)

ATGGCCACGGCGTTGCTGCCCTCAACTCACCCTTTTCCCCTTCGTTTTTCTCCCACTCCCTCCCCCAAACACCGCCAATTTTCCTCTCTTCCTCTCCCTCCAAAACCCTTAATTCCCAAATCGAACCCTAACCGATCCCTAAAGACGGTGGTGGTTCGAGCCGAGAGCTTGCAGAGCCTTGTATCGGGTGCTGTGAACATCGTCCAATCGAATCCCCCCACGTGGCAATCGGCCTTACTCACTAACCTGCTGATTTTCGTCGCTGGTTCGCCGATTCTGGCCTTGGGATTGTCTGTTTCGGGCATTGCTTCTGCTTTCTTGCTTGGTACTCTCACATGGCGTGCTTTTGGACCCTCTGGTTTCCTTCTTGTTGCTACCTACTTCGTCATTGGAACAGCTGCAACAAAGGTCAAGATGGCTCAAAAGGAAGCACAAGGGGTAGCTGAAAAGAGAAAAGGAAGAAGAGGACTTGGTAGTGTTATAGGATCCAGTGCTGCTGGTTGTGTGTGTGCTTTGCTCATGATAAACAACATTGGAGGAGAAGCATTCCGACAACTTTGGCGACTTGGTTTTGTTGCCTGTTTCTGTACTAAATTGAGTGATACTGTCTCAAGTGAAATAGGGAAGGCATATGGTCGGATAACGTACCTGGTGACAACATTTAGGATAGTTCCTCGGGGAACAGAAGGGGCTGTCAGTCTGGAGGGAACCTTTGCTGGACTCTTAGCAGCAAGTGTTCTTGCATTTGTTGGCTGTCTTTTGGGCGACGTAACTGCATCTGAAGCAATTGTATGCGTCGTAGCTTCACAGATAGCTAATCTTGGTGAAAGCATCATTGGTGCTGTGCTTCAAGGGAAGGAGGGATTTCAGTGGGTAAGCAAGTGA

Protein sequence

MATALLPSTHPFPLRFSPTPSPKHRQFSSLPLPPKPLIPKSNPNRSLKTVVVRAESLQSLVSGAVNIVQSNPPTWQSALLTNLLIFVAGSPILALGLSVSGIASAFLLGTLTWRAFGPSGFLLVATYFVIGTAATKVKMAQKEAQGVAEKRKGRRGLGSVIGSSAAGCVCALLMINNIGGEAFRQLWRLGFVACFCTKLSDTVSSEIGKAYGRITYLVTTFRIVPRGTEGAVSLEGTFAGLLAASVLAFVGCLLGDVTASEAIVCVVASQIANLGESIIGAVLQGKEGFQWVSK

Homology

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BLAST of Carg11355 vs. NCBI nr
Match: KAG7015045.1 (Protein VTE6, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 556.2 bits (1432), Expect = 1.7e-154
Identity = 294/294 (100.00%), Postives = 294/294 (100.00%), Query Frame = 0


Query: 1   MATALLPSTHPFPLRFSPTPSPKHRQFSSLPLPPKPLIPKSNPNRSLKTVVVRAESLQSL 60
           MATALLPSTHPFPLRFSPTPSPKHRQFSSLPLPPKPLIPKSNPNRSLKTVVVRAESLQSL
Sbjct: 1   MATALLPSTHPFPLRFSPTPSPKHRQFSSLPLPPKPLIPKSNPNRSLKTVVVRAESLQSL 60

Query: 61  VSGAVNIVQSNPPTWQSALLTNLLIFVAGSPILALGLSVSGIASAFLLGTLTWRAFGPSG 120
           VSGAVNIVQSNPPTWQSALLTNLLIFVAGSPILALGLSVSGIASAFLLGTLTWRAFGPSG
Sbjct: 61  VSGAVNIVQSNPPTWQSALLTNLLIFVAGSPILALGLSVSGIASAFLLGTLTWRAFGPSG 120

Query: 121 FLLVATYFVIGTAATKVKMAQKEAQGVAEKRKGRRGLGSVIGSSAAGCVCALLMINNIGG 180
           FLLVATYFVIGTAATKVKMAQKEAQGVAEKRKGRRGLGSVIGSSAAGCVCALLMINNIGG
Sbjct: 121 FLLVATYFVIGTAATKVKMAQKEAQGVAEKRKGRRGLGSVIGSSAAGCVCALLMINNIGG 180

Query: 181 EAFRQLWRLGFVACFCTKLSDTVSSEIGKAYGRITYLVTTFRIVPRGTEGAVSLEGTFAG 240
           EAFRQLWRLGFVACFCTKLSDTVSSEIGKAYGRITYLVTTFRIVPRGTEGAVSLEGTFAG
Sbjct: 181 EAFRQLWRLGFVACFCTKLSDTVSSEIGKAYGRITYLVTTFRIVPRGTEGAVSLEGTFAG 240

Query: 241 LLAASVLAFVGCLLGDVTASEAIVCVVASQIANLGESIIGAVLQGKEGFQWVSK 295
           LLAASVLAFVGCLLGDVTASEAIVCVVASQIANLGESIIGAVLQGKEGFQWVSK
Sbjct: 241 LLAASVLAFVGCLLGDVTASEAIVCVVASQIANLGESIIGAVLQGKEGFQWVSK 294

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BLAST of Carg11355 vs. NCBI nr
Match: XP_022923142.1 (protein VTE6, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 543.9 bits (1400), Expect = 8.6e-151
Identity = 287/293 (97.95%), Postives = 290/293 (98.98%), Query Frame = 0


Query: 1   MATALLPSTHPFPLRFSPTPSPKHRQFSSLPLPPKPLIPKSNPNRSLKTVVVRAESLQSL 60
           MATALLPSTHPFPLRFSPTPSPKHRQFSSLPLPP+PL PKSNPNRSLKTVVVRAESLQSL
Sbjct: 1   MATALLPSTHPFPLRFSPTPSPKHRQFSSLPLPPEPLFPKSNPNRSLKTVVVRAESLQSL 60

Query: 61  VSGAVNIVQSNPPTWQSALLTNLLIFVAGSPILALGLSVSGIASAFLLGTLTWRAFGPSG 120
           VSGAVNIVQSNPPTWQSALLTNLLIFVAGSPILALGLSVSGIASAFLLGTLTWRAFGPSG
Sbjct: 61  VSGAVNIVQSNPPTWQSALLTNLLIFVAGSPILALGLSVSGIASAFLLGTLTWRAFGPSG 120

Query: 121 FLLVATYFVIGTAATKVKMAQKEAQGVAEKRKGRRGLGSVIGSSAAGCVCALLMINNIGG 180
           FLLVATYFVIGTAATKVKMAQKEAQGVAEKRKGRRGLGSVIGSSAAGCVCALLMINN GG
Sbjct: 121 FLLVATYFVIGTAATKVKMAQKEAQGVAEKRKGRRGLGSVIGSSAAGCVCALLMINNTGG 180

Query: 181 EAFRQLWRLGFVACFCTKLSDTVSSEIGKAYGRITYLVTTFRIVPRGTEGAVSLEGTFAG 240
           EAFRQLWRLGFVACFCTKLSDTVSSEIGKAYGRITYLVTTFRIVPRGTEGAVSLEGTFAG
Sbjct: 181 EAFRQLWRLGFVACFCTKLSDTVSSEIGKAYGRITYLVTTFRIVPRGTEGAVSLEGTFAG 240

Query: 241 LLAASVLAFVGCLLGDVTASEAIVCVVASQIANLGESIIGAVLQGKEGFQWVS 294
           LLAASVLAFVGCLLGDVTASEAIVCVVASQIANLGESIIGAVLQ KEGFQW++
Sbjct: 241 LLAASVLAFVGCLLGDVTASEAIVCVVASQIANLGESIIGAVLQEKEGFQWLN 293

[Close]

BLAST of Carg11355 vs. NCBI nr
Match: KAG6577023.1 (Protein VTE6, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 543.5 bits (1399), Expect = 1.1e-150
Identity = 287/293 (97.95%), Postives = 290/293 (98.98%), Query Frame = 0


Query: 1   MATALLPSTHPFPLRFSPTPSPKHRQFSSLPLPPKPLIPKSNPNRSLKTVVVRAESLQSL 60
           MATALLPSTHPFPLRFSPTPSPKHRQFSSLPLPPKPL PKSNPNRSLKTVVVRAESLQSL
Sbjct: 1   MATALLPSTHPFPLRFSPTPSPKHRQFSSLPLPPKPLFPKSNPNRSLKTVVVRAESLQSL 60

Query: 61  VSGAVNIVQSNPPTWQSALLTNLLIFVAGSPILALGLSVSGIASAFLLGTLTWRAFGPSG 120
           VSGAVNIVQSNPPTWQSALLTNLLIFVAGS ILALGLSVSGIASAFLLGTLTWRAFGPSG
Sbjct: 61  VSGAVNIVQSNPPTWQSALLTNLLIFVAGSRILALGLSVSGIASAFLLGTLTWRAFGPSG 120

Query: 121 FLLVATYFVIGTAATKVKMAQKEAQGVAEKRKGRRGLGSVIGSSAAGCVCALLMINNIGG 180
           FLLVATYFVIGTAATKVKMAQKEAQGVAEKRKGRRGLGSVIGSSAAGCVCALLMINNIGG
Sbjct: 121 FLLVATYFVIGTAATKVKMAQKEAQGVAEKRKGRRGLGSVIGSSAAGCVCALLMINNIGG 180

Query: 181 EAFRQLWRLGFVACFCTKLSDTVSSEIGKAYGRITYLVTTFRIVPRGTEGAVSLEGTFAG 240
           EAFRQLWRLGFVACFCTKLSDTVSSEIGKAYGRITYLVTTFRIVPRGTEGA+SLEGTFAG
Sbjct: 181 EAFRQLWRLGFVACFCTKLSDTVSSEIGKAYGRITYLVTTFRIVPRGTEGAISLEGTFAG 240

Query: 241 LLAASVLAFVGCLLGDVTASEAIVCVVASQIANLGESIIGAVLQGKEGFQWVS 294
           LLAASVLAFVGCLLGDVTASEAIVCVVASQIANLGESIIGAVLQ KEGFQW++
Sbjct: 241 LLAASVLAFVGCLLGDVTASEAIVCVVASQIANLGESIIGAVLQEKEGFQWLN 293

[Close]

BLAST of Carg11355 vs. NCBI nr
Match: XP_023553437.1 (protein VTE6, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 525.4 bits (1352), Expect = 3.2e-145
Identity = 281/293 (95.90%), Postives = 286/293 (97.61%), Query Frame = 0


Query: 1   MATALLPSTHPFPLRFSPTPSPKHRQFSSLPLPPKPLIPKSNPNRSLKTVVVRAESLQSL 60
           MATALLPSTHPFPLRFSPTPSPK RQFSSLPLPPKPL PKSNPNRSLKT VVRAESLQSL
Sbjct: 1   MATALLPSTHPFPLRFSPTPSPKLRQFSSLPLPPKPLFPKSNPNRSLKT-VVRAESLQSL 60

Query: 61  VSGAVNIVQSNPPTWQSALLTNLLIFVAGSPILALGLSVSGIASAFLLGTLTWRAFGPSG 120
           VS AVNIVQSNPPTWQSALLTNLLIFVAGSPILA GLSVSGIASAFLLGTLTWRAFGPSG
Sbjct: 61  VSVAVNIVQSNPPTWQSALLTNLLIFVAGSPILASGLSVSGIASAFLLGTLTWRAFGPSG 120

Query: 121 FLLVATYFVIGTAATKVKMAQKEAQGVAEKRKGRRGLGSVIGSSAAGCVCALLMINNIGG 180
           FLLVATYFVIGTAATKVKMAQKEAQGVAEKRKGRRGLGSVIGSSAAGCVCALLMINNIGG
Sbjct: 121 FLLVATYFVIGTAATKVKMAQKEAQGVAEKRKGRRGLGSVIGSSAAGCVCALLMINNIGG 180

Query: 181 EAFRQLWRLGFVACFCTKLSDTVSSEIGKAYGRITYLVTTFRIVPRGTEGAVSLEGTFAG 240
           E+FRQLWRLGFVA FCTKLSDTVSSEIGKAYGRITYLVTTFRIVPRGTEGA+SLEGTFAG
Sbjct: 181 ESFRQLWRLGFVASFCTKLSDTVSSEIGKAYGRITYLVTTFRIVPRGTEGAISLEGTFAG 240

Query: 241 LLAASVLAFVGCLLGDVTASEAIVCVVASQIANLGESIIGAVLQGKEGFQWVS 294
           LLAASVLAFVGCLLGD+TASEAIVCVVASQIANLGESIIGAVLQ KEGFQW++
Sbjct: 241 LLAASVLAFVGCLLGDITASEAIVCVVASQIANLGESIIGAVLQEKEGFQWLN 292

[Close]

BLAST of Carg11355 vs. NCBI nr
Match: XP_022984475.1 (protein VTE6, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 520.0 bits (1338), Expect = 1.3e-143
Identity = 279/293 (95.22%), Postives = 283/293 (96.59%), Query Frame = 0


Query: 1   MATALLPSTHPFPLRFSPTPSPKHRQFSSLPLPPKPLIPKSNPNRSLKTVVVRAESLQSL 60
           MATALLPSTHPFPLRFSPTPSPK RQFSSLPLPPKPL  KSNPNRSLKT VVRAESLQSL
Sbjct: 1   MATALLPSTHPFPLRFSPTPSPKLRQFSSLPLPPKPLFAKSNPNRSLKT-VVRAESLQSL 60

Query: 61  VSGAVNIVQSNPPTWQSALLTNLLIFVAGSPILALGLSVSGIASAFLLGTLTWRAFGPSG 120
           VSGAVNIVQSNPPTWQSALLTNLLIFV GSPILA GLSVSGIASAFLLGTLTWRAFGPSG
Sbjct: 61  VSGAVNIVQSNPPTWQSALLTNLLIFVVGSPILASGLSVSGIASAFLLGTLTWRAFGPSG 120

Query: 121 FLLVATYFVIGTAATKVKMAQKEAQGVAEKRKGRRGLGSVIGSSAAGCVCALLMINNIGG 180
           FLLVATYFVIGTAATKVKMAQKEAQGVAEKR+GRRGLGSVIGSSAAGCVCALLMINNIGG
Sbjct: 121 FLLVATYFVIGTAATKVKMAQKEAQGVAEKRQGRRGLGSVIGSSAAGCVCALLMINNIGG 180

Query: 181 EAFRQLWRLGFVACFCTKLSDTVSSEIGKAYGRITYLVTTFRIVPRGTEGAVSLEGTFAG 240
           EAFRQLWRLGFVA FCTKLSDTVSSEIGKAYGRITYLVTTFRIVPRGTEGAVSLEGTFAG
Sbjct: 181 EAFRQLWRLGFVASFCTKLSDTVSSEIGKAYGRITYLVTTFRIVPRGTEGAVSLEGTFAG 240

Query: 241 LLAASVLAFVGCLLGDVTASEAIVCVVASQIANLGESIIGAVLQGKEGFQWVS 294
           LLAASVLAFVGCLLGD TAS AIVCV+ASQIANLGESIIGAVLQ KEGFQW++
Sbjct: 241 LLAASVLAFVGCLLGDATASGAIVCVIASQIANLGESIIGAVLQEKEGFQWLN 292

[Close]

BLAST of Carg11355 vs. ExPASy Swiss-Prot
Match: Q9SYM0 (Protein VTE6, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=VTE6 PE=1 SV=1)

HSP 1 Score: 332.0 bits (850), Expect = 6.7e-90
Identity = 190/300 (63.33%), Postives = 225/300 (75.00%), Query Frame = 0


Query: 2   ATALLPSTH-PFPLRF-------SPTPSPKHRQFSSLPLPPKPLIPKSNPNRSLKTVVVR 61
           +T LL S+    PLRF       S +P  +  +F    L P      S+ +R+       
Sbjct: 6   STLLLNSSRSALPLRFPKFSGFSSSSPFARSYRFGRRNLEPLSNGMLSSGSRA-DGATAA 65

Query: 62  AESLQSLVSGAVNIVQSNPPTWQSALLTNLLIFVAGSPILALGLSVSGIASAFLLGTLTW 121
           A S++ +++ A+ ++QS  PTW+SA+  NLLIFV GSP+L  GLS SGIA+AFLLGTLTW
Sbjct: 66  AASMEGVMTEAMKLIQSASPTWKSAVANNLLIFVLGSPLLVTGLSASGIAAAFLLGTLTW 125

Query: 122 RAFGPSGFLLVATYFVIGTAATKVKMAQKEAQGVAEKRKGRRGLGSVIGSSAAGCVCALL 181
           RA+G +GFLLVA YFVIGTAATKVKM QKEAQGVAEKRKGRRG  SVIGSSAAGCVCA L
Sbjct: 126 RAYGSAGFLLVAAYFVIGTAATKVKMTQKEAQGVAEKRKGRRGPRSVIGSSAAGCVCAFL 185

Query: 182 MINNIGGEAFRQLWRLGFVACFCTKLSDTVSSEIGKAYGRITYLVTTFRIVPRGTEGAVS 241
            I  +GG AF QL+RLGFV+ FCTK+SDTVSSEIGKAYG+ TYL TTF+IVPRGTEGA+S
Sbjct: 186 SIYQVGGAAFSQLFRLGFVSSFCTKVSDTVSSEIGKAYGKTTYLATTFKIVPRGTEGAMS 245

Query: 242 LEGTFAGLLAASVLAFVGCLLGDVTASEAIVCVVASQIANLGESIIGAVLQGKEGFQWVS 294
           LEGT AGLLA+  LA VGC LG +T  EA VCV+ASQIANLGESIIGA  Q KEGF+W++
Sbjct: 246 LEGTLAGLLASFFLASVGCFLGQITPPEAAVCVLASQIANLGESIIGASFQDKEGFKWLN 304

[Close]

BLAST of Carg11355 vs. ExPASy Swiss-Prot
Match: P73555 (Uncharacterized membrane protein sll0875 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=sll0875 PE=3 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 6.6e-37
Identity = 96/213 (45.07%), Postives = 133/213 (62.44%), Query Frame = 0


Query: 75  WQSALLTNLLIFVAGSPILALGLSVSGIASAFLLGTLTWRAFGPSGFLLVATYFVIGTAA 134
           W SA++ N  +    +      L+  G   A++LG + W A G  G+L+V  YF +G+A 
Sbjct: 18  WLSAVILNSFLLALAAIAPKKLLTPWGYGHAWVLGVIIWAALGWRGYLVVLAYFFVGSAV 77

Query: 135 TKVKMAQKEAQGVAEKRKGRRGLGSVIGSSAAGCVCALLMINNIGGEAFRQLW-RLGFVA 194
           T++   +KEA G+AEKR G+RG  +V GS+    +CAL +    G E + QLW  LG+VA
Sbjct: 78  TRIGQKEKEAAGIAEKRSGQRGPENVWGSALTAALCALAIA--FGPEPW-QLWLALGYVA 137

Query: 195 CFCTKLSDTVSSEIGKAYGRITYLVTTFRIVPRGTEGAVSLEGTFAGLLAASVLAFVGCL 254
            F TKLSDT +SE+GKAYG+ T+L+TT + VPRGTEGAVS+EGT AG  A   LA +G  
Sbjct: 138 SFSTKLSDTTASEVGKAYGKNTFLITTLQPVPRGTEGAVSVEGTLAGFAAGLALAVLGYG 197

Query: 255 LGDVTASEAIVCVVASQIANLGESIIGAVLQGK 287
           +G ++    I   +A+ IA   ES+IGA LQ K
Sbjct: 198 VGLISFGGIIFSTLAAFIATNLESVIGATLQNK 227

[Close]

BLAST of Carg11355 vs. ExPASy Swiss-Prot
Match: Q58343 (Uncharacterized membrane protein MJ0933 OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) OX=243232 GN=MJ0933 PE=3 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 1.5e-12
Identity = 58/193 (30.05%), Postives = 104/193 (53.89%), Query Frame = 0


Query: 97  LSVSGIASAFLLGTLTWRAFGPSGFLLVATYFVIGTAATKVKMAQKEAQGVAEKRKGRRG 156
           L   G+  + ++G +     G    +L+ ++F++G   ++V + +K+A+ + E     R 
Sbjct: 32  LDNEGVIGSSIMGFILLYFCGFKYLILLLSFFILGVLVSRVGLEKKKAKKMDET---CRS 91

Query: 157 LGSVIGSSAAGCVCALLMINNIGGEAFRQLWRL-GFVACFCTKLSDTVSSEIGKAYGRIT 216
           L +V+ +     + A+L I       F   W L G+++      SDT SSE+G       
Sbjct: 92  LKNVLANGLIPILFAILAI-------FGFNWALIGYISSIAAATSDTFSSELGILSNEKP 151

Query: 217 YLVTTFRIVPRGTEGAVSLEGTFAGLLAASVLAFVGCLL-GDVTASEAIVCVVASQIA-N 276
            L+TTF +V +GT+GA+++ GT AG+L A ++   G LL GD+   + ++C  A  IA N
Sbjct: 152 RLITTFEVVEKGTDGAITIFGTLAGVLGAFLIGLFGYLLFGDI---KIVLCGTAGGIAGN 211

Query: 277 LGESIIGAVLQGK 287
           L +S++GA+ + K
Sbjct: 212 LADSLVGALFERK 211

[Close]

BLAST of Carg11355 vs. ExPASy TrEMBL
Match: A0A6J1E5C7 (protein VTE6, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111430893 PE=3 SV=1)

HSP 1 Score: 543.9 bits (1400), Expect = 4.2e-151
Identity = 287/293 (97.95%), Postives = 290/293 (98.98%), Query Frame = 0


Query: 1   MATALLPSTHPFPLRFSPTPSPKHRQFSSLPLPPKPLIPKSNPNRSLKTVVVRAESLQSL 60
           MATALLPSTHPFPLRFSPTPSPKHRQFSSLPLPP+PL PKSNPNRSLKTVVVRAESLQSL
Sbjct: 1   MATALLPSTHPFPLRFSPTPSPKHRQFSSLPLPPEPLFPKSNPNRSLKTVVVRAESLQSL 60

Query: 61  VSGAVNIVQSNPPTWQSALLTNLLIFVAGSPILALGLSVSGIASAFLLGTLTWRAFGPSG 120
           VSGAVNIVQSNPPTWQSALLTNLLIFVAGSPILALGLSVSGIASAFLLGTLTWRAFGPSG
Sbjct: 61  VSGAVNIVQSNPPTWQSALLTNLLIFVAGSPILALGLSVSGIASAFLLGTLTWRAFGPSG 120

Query: 121 FLLVATYFVIGTAATKVKMAQKEAQGVAEKRKGRRGLGSVIGSSAAGCVCALLMINNIGG 180
           FLLVATYFVIGTAATKVKMAQKEAQGVAEKRKGRRGLGSVIGSSAAGCVCALLMINN GG
Sbjct: 121 FLLVATYFVIGTAATKVKMAQKEAQGVAEKRKGRRGLGSVIGSSAAGCVCALLMINNTGG 180

Query: 181 EAFRQLWRLGFVACFCTKLSDTVSSEIGKAYGRITYLVTTFRIVPRGTEGAVSLEGTFAG 240
           EAFRQLWRLGFVACFCTKLSDTVSSEIGKAYGRITYLVTTFRIVPRGTEGAVSLEGTFAG
Sbjct: 181 EAFRQLWRLGFVACFCTKLSDTVSSEIGKAYGRITYLVTTFRIVPRGTEGAVSLEGTFAG 240

Query: 241 LLAASVLAFVGCLLGDVTASEAIVCVVASQIANLGESIIGAVLQGKEGFQWVS 294
           LLAASVLAFVGCLLGDVTASEAIVCVVASQIANLGESIIGAVLQ KEGFQW++
Sbjct: 241 LLAASVLAFVGCLLGDVTASEAIVCVVASQIANLGESIIGAVLQEKEGFQWLN 293

[Close]

BLAST of Carg11355 vs. ExPASy TrEMBL
Match: A0A6J1J8Q4 (protein VTE6, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111482766 PE=3 SV=1)

HSP 1 Score: 520.0 bits (1338), Expect = 6.4e-144
Identity = 279/293 (95.22%), Postives = 283/293 (96.59%), Query Frame = 0


Query: 1   MATALLPSTHPFPLRFSPTPSPKHRQFSSLPLPPKPLIPKSNPNRSLKTVVVRAESLQSL 60
           MATALLPSTHPFPLRFSPTPSPK RQFSSLPLPPKPL  KSNPNRSLKT VVRAESLQSL
Sbjct: 1   MATALLPSTHPFPLRFSPTPSPKLRQFSSLPLPPKPLFAKSNPNRSLKT-VVRAESLQSL 60

Query: 61  VSGAVNIVQSNPPTWQSALLTNLLIFVAGSPILALGLSVSGIASAFLLGTLTWRAFGPSG 120
           VSGAVNIVQSNPPTWQSALLTNLLIFV GSPILA GLSVSGIASAFLLGTLTWRAFGPSG
Sbjct: 61  VSGAVNIVQSNPPTWQSALLTNLLIFVVGSPILASGLSVSGIASAFLLGTLTWRAFGPSG 120

Query: 121 FLLVATYFVIGTAATKVKMAQKEAQGVAEKRKGRRGLGSVIGSSAAGCVCALLMINNIGG 180
           FLLVATYFVIGTAATKVKMAQKEAQGVAEKR+GRRGLGSVIGSSAAGCVCALLMINNIGG
Sbjct: 121 FLLVATYFVIGTAATKVKMAQKEAQGVAEKRQGRRGLGSVIGSSAAGCVCALLMINNIGG 180

Query: 181 EAFRQLWRLGFVACFCTKLSDTVSSEIGKAYGRITYLVTTFRIVPRGTEGAVSLEGTFAG 240
           EAFRQLWRLGFVA FCTKLSDTVSSEIGKAYGRITYLVTTFRIVPRGTEGAVSLEGTFAG
Sbjct: 181 EAFRQLWRLGFVASFCTKLSDTVSSEIGKAYGRITYLVTTFRIVPRGTEGAVSLEGTFAG 240

Query: 241 LLAASVLAFVGCLLGDVTASEAIVCVVASQIANLGESIIGAVLQGKEGFQWVS 294
           LLAASVLAFVGCLLGD TAS AIVCV+ASQIANLGESIIGAVLQ KEGFQW++
Sbjct: 241 LLAASVLAFVGCLLGDATASGAIVCVIASQIANLGESIIGAVLQEKEGFQWLN 292

[Close]

BLAST of Carg11355 vs. ExPASy TrEMBL
Match: A0A6J1CPE4 (protein VTE6, chloroplastic isoform X1 OS=Momordica charantia OX=3673 GN=LOC111012898 PE=3 SV=1)

HSP 1 Score: 440.7 bits (1132), Expect = 5.0e-120
Identity = 241/292 (82.53%), Postives = 257/292 (88.01%), Query Frame = 0


Query: 4   ALLPSTHPFPLRFSPTPSPKHRQFSSLPLPPKPLIPKSNPN--RSLKTVVVRAESLQSLV 63
           AL+ ST  FPL  SP  SPK  QF    LPPK LI K +P   RS K +VVRAESLQSLV
Sbjct: 2   ALMASTLLFPLHVSPISSPKFPQFPLFSLPPKTLISKPSPATIRSAK-MVVRAESLQSLV 61

Query: 64  SGAVNIVQSNPPTWQSALLTNLLIFVAGSPILALGLSVSGIASAFLLGTLTWRAFGPSGF 123
           SG +NIV+SNP TW SALL+NLLIF+ GSPIL  GLSVSGIASAFLLGTLTWRAFGPSGF
Sbjct: 62  SGTLNIVRSNPATWHSALLSNLLIFIVGSPILVSGLSVSGIASAFLLGTLTWRAFGPSGF 121

Query: 124 LLVATYFVIGTAATKVKMAQKEAQGVAEKRKGRRGLGSVIGSSAAGCVCALLMINNIGGE 183
           LLVATYF++GTAATKVKMAQKEAQGVAEKRKGRRG GSVIGSSAAGCVCALLMIN +GGE
Sbjct: 122 LLVATYFILGTAATKVKMAQKEAQGVAEKRKGRRGPGSVIGSSAAGCVCALLMINKVGGE 181

Query: 184 AFRQLWRLGFVACFCTKLSDTVSSEIGKAYGRITYLVTTFRIVPRGTEGAVSLEGTFAGL 243
           AF QLWRLGFVA FCTKLSDTVSSEIGKAYGRITYLVTTF++VPRGTEGAVSLEGTFAGL
Sbjct: 182 AFTQLWRLGFVASFCTKLSDTVSSEIGKAYGRITYLVTTFKVVPRGTEGAVSLEGTFAGL 241

Query: 244 LAASVLAFVGCLLGDVTASEAIVCVVASQIANLGESIIGAVLQGKEGFQWVS 294
           LAA  L+FVGCLLGDVTA EAIVCV+ASQIANLGESIIGAVLQ KEGFQW++
Sbjct: 242 LAAIALSFVGCLLGDVTAPEAIVCVIASQIANLGESIIGAVLQEKEGFQWLN 292

[Close]

BLAST of Carg11355 vs. ExPASy TrEMBL
Match: A0A0A0KVG7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G083590 PE=3 SV=1)

HSP 1 Score: 439.5 bits (1129), Expect = 1.1e-119
Identity = 238/289 (82.35%), Postives = 255/289 (88.24%), Query Frame = 0


Query: 5   LLPSTHPFPLRFSPTPSPKHRQFSSLPLPPKPLIPKSNPNRSLKTVVVRAESLQSLVSGA 64
           ++ ST PFPL      SPK  QF  LP P KPLI KSNPN S K +VVRA+S ++L SGA
Sbjct: 4   MISSTLPFPLLL----SPKRHQFPLLPFPLKPLITKSNPNPSSK-MVVRAQSFETLASGA 63

Query: 65  VNIVQSNPPTWQSALLTNLLIFVAGSPILALGLSVSGIASAFLLGTLTWRAFGPSGFLLV 124
           VN++QSNP TW SALL+NLLIF+ GSPIL  GLS SGIASAFLLGTLTWRAFGPSGFLLV
Sbjct: 64  VNLLQSNPATWHSALLSNLLIFLLGSPILVSGLSPSGIASAFLLGTLTWRAFGPSGFLLV 123

Query: 125 ATYFVIGTAATKVKMAQKEAQGVAEKRKGRRGLGSVIGSSAAGCVCALLMINNIGGEAFR 184
           ATYFVIGTAATKVKMAQKEAQGVAEKRKGRRG GSVIGSSAAGCVCA+LMIN +GGEAF 
Sbjct: 124 ATYFVIGTAATKVKMAQKEAQGVAEKRKGRRGPGSVIGSSAAGCVCAVLMINKVGGEAFA 183

Query: 185 QLWRLGFVACFCTKLSDTVSSEIGKAYGRITYLVTTFRIVPRGTEGAVSLEGTFAGLLAA 244
           QLWRLGFVA FCTKLSDTVSSEIGKAYGRITYLVT F++VPRGTEGAVSLEGTFAGLLAA
Sbjct: 184 QLWRLGFVASFCTKLSDTVSSEIGKAYGRITYLVTNFKVVPRGTEGAVSLEGTFAGLLAA 243

Query: 245 SVLAFVGCLLGDVTASEAIVCVVASQIANLGESIIGAVLQGKEGFQWVS 294
             LAFVGCLLGDVTASEAIVCV+ASQIANLGESIIGAVLQ KEGFQW++
Sbjct: 244 IALAFVGCLLGDVTASEAIVCVIASQIANLGESIIGAVLQEKEGFQWLN 287

[Close]

BLAST of Carg11355 vs. ExPASy TrEMBL
Match: A0A5A7UZZ0 (Protein VTE6 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold233G00770 PE=3 SV=1)

HSP 1 Score: 437.6 bits (1124), Expect = 4.2e-119
Identity = 237/289 (82.01%), Postives = 253/289 (87.54%), Query Frame = 0


Query: 5   LLPSTHPFPLRFSPTPSPKHRQFSSLPLPPKPLIPKSNPNRSLKTVVVRAESLQSLVSGA 64
           ++ ST PFPL      SPK  QF  LPLP KPLIPKSNPN S   +VVRA+S  +L SGA
Sbjct: 290 MISSTLPFPLLL----SPKRHQFPLLPLPLKPLIPKSNPNPS-SQMVVRAQSFHTLASGA 349

Query: 65  VNIVQSNPPTWQSALLTNLLIFVAGSPILALGLSVSGIASAFLLGTLTWRAFGPSGFLLV 124
            N++QSNP TWQSALL+NLLIFV GSPIL  GLS+SGIASAFLLGTLTWRAFGPSGFLLV
Sbjct: 350 FNLLQSNPSTWQSALLSNLLIFVLGSPILVSGLSLSGIASAFLLGTLTWRAFGPSGFLLV 409

Query: 125 ATYFVIGTAATKVKMAQKEAQGVAEKRKGRRGLGSVIGSSAAGCVCALLMINNIGGEAFR 184
           ATYFVIGTAATKVKMAQKEAQGVAEKRKGRRG GSVIGSSAAGCVCA+LMIN +GGEAF 
Sbjct: 410 ATYFVIGTAATKVKMAQKEAQGVAEKRKGRRGPGSVIGSSAAGCVCAVLMINKVGGEAFS 469

Query: 185 QLWRLGFVACFCTKLSDTVSSEIGKAYGRITYLVTTFRIVPRGTEGAVSLEGTFAGLLAA 244
           QLWRLGFVA FCTKLSDTVSSEIGKAYGRITYLVT F++VPRGTEGAVSLEGTFAGLLAA
Sbjct: 470 QLWRLGFVASFCTKLSDTVSSEIGKAYGRITYLVTNFKVVPRGTEGAVSLEGTFAGLLAA 529

Query: 245 SVLAFVGCLLGDVTASEAIVCVVASQIANLGESIIGAVLQGKEGFQWVS 294
             LA  GCLLGDVTA EAIVCV+ASQIANLGESIIGAVLQ KEGFQW++
Sbjct: 530 ITLASAGCLLGDVTAPEAIVCVIASQIANLGESIIGAVLQEKEGFQWLN 573

[Close]

BLAST of Carg11355 vs. TAIR 10
Match: AT1G78620.1 (Protein of unknown function DUF92, transmembrane )

HSP 1 Score: 332.0 bits (850), Expect = 4.8e-91
Identity = 190/300 (63.33%), Postives = 225/300 (75.00%), Query Frame = 0


Query: 2   ATALLPSTH-PFPLRF-------SPTPSPKHRQFSSLPLPPKPLIPKSNPNRSLKTVVVR 61
           +T LL S+    PLRF       S +P  +  +F    L P      S+ +R+       
Sbjct: 6   STLLLNSSRSALPLRFPKFSGFSSSSPFARSYRFGRRNLEPLSNGMLSSGSRA-DGATAA 65

Query: 62  AESLQSLVSGAVNIVQSNPPTWQSALLTNLLIFVAGSPILALGLSVSGIASAFLLGTLTW 121
           A S++ +++ A+ ++QS  PTW+SA+  NLLIFV GSP+L  GLS SGIA+AFLLGTLTW
Sbjct: 66  AASMEGVMTEAMKLIQSASPTWKSAVANNLLIFVLGSPLLVTGLSASGIAAAFLLGTLTW 125

Query: 122 RAFGPSGFLLVATYFVIGTAATKVKMAQKEAQGVAEKRKGRRGLGSVIGSSAAGCVCALL 181
           RA+G +GFLLVA YFVIGTAATKVKM QKEAQGVAEKRKGRRG  SVIGSSAAGCVCA L
Sbjct: 126 RAYGSAGFLLVAAYFVIGTAATKVKMTQKEAQGVAEKRKGRRGPRSVIGSSAAGCVCAFL 185

Query: 182 MINNIGGEAFRQLWRLGFVACFCTKLSDTVSSEIGKAYGRITYLVTTFRIVPRGTEGAVS 241
            I  +GG AF QL+RLGFV+ FCTK+SDTVSSEIGKAYG+ TYL TTF+IVPRGTEGA+S
Sbjct: 186 SIYQVGGAAFSQLFRLGFVSSFCTKVSDTVSSEIGKAYGKTTYLATTFKIVPRGTEGAMS 245

Query: 242 LEGTFAGLLAASVLAFVGCLLGDVTASEAIVCVVASQIANLGESIIGAVLQGKEGFQWVS 294
           LEGT AGLLA+  LA VGC LG +T  EA VCV+ASQIANLGESIIGA  Q KEGF+W++
Sbjct: 246 LEGTLAGLLASFFLASVGCFLGQITPPEAAVCVLASQIANLGESIIGASFQDKEGFKWLN 304

[Close]

BLAST of Carg11355 vs. TAIR 10
Match: AT1G78620.2 (Protein of unknown function DUF92, transmembrane )

HSP 1 Score: 324.3 bits (830), Expect = 1.0e-88
Identity = 190/309 (61.49%), Postives = 225/309 (72.82%), Query Frame = 0


Query: 2   ATALLPSTH-PFPLRF-------SPTPSPKHRQFSSLPLPPKPLIPKSNPNRSLKTVVVR 61
           +T LL S+    PLRF       S +P  +  +F    L P      S+ +R+       
Sbjct: 6   STLLLNSSRSALPLRFPKFSGFSSSSPFARSYRFGRRNLEPLSNGMLSSGSRA-DGATAA 65

Query: 62  AESLQSLVSGAVNIVQSNPPTWQSALLTNLLIFVAGSPILALGLSVSGIASAFLLGTLTW 121
           A S++ +++ A+ ++QS  PTW+SA+  NLLIFV GSP+L  GLS SGIA+AFLLGTLTW
Sbjct: 66  AASMEGVMTEAMKLIQSASPTWKSAVANNLLIFVLGSPLLVTGLSASGIAAAFLLGTLTW 125

Query: 122 RAFGPSGFLLVATYFVI---------GTAATKVKMAQKEAQGVAEKRKGRRGLGSVIGSS 181
           RA+G +GFLLVA YFVI         GTAATKVKM QKEAQGVAEKRKGRRG  SVIGSS
Sbjct: 126 RAYGSAGFLLVAAYFVIVSAFVINLNGTAATKVKMTQKEAQGVAEKRKGRRGPRSVIGSS 185

Query: 182 AAGCVCALLMINNIGGEAFRQLWRLGFVACFCTKLSDTVSSEIGKAYGRITYLVTTFRIV 241
           AAGCVCA L I  +GG AF QL+RLGFV+ FCTK+SDTVSSEIGKAYG+ TYL TTF+IV
Sbjct: 186 AAGCVCAFLSIYQVGGAAFSQLFRLGFVSSFCTKVSDTVSSEIGKAYGKTTYLATTFKIV 245

Query: 242 PRGTEGAVSLEGTFAGLLAASVLAFVGCLLGDVTASEAIVCVVASQIANLGESIIGAVLQ 294
           PRGTEGA+SLEGT AGLLA+  LA VGC LG +T  EA VCV+ASQIANLGESIIGA  Q
Sbjct: 246 PRGTEGAMSLEGTLAGLLASFFLASVGCFLGQITPPEAAVCVLASQIANLGESIIGASFQ 305

[Close]

BLAST of Carg11355 vs. TAIR 10
Match: AT5G19930.1 (Protein of unknown function DUF92, transmembrane )

HSP 1 Score: 45.4 bits (106), Expect = 8.9e-05
Identity = 55/204 (26.96%), Postives = 88/204 (43.14%), Query Frame = 0


Query: 97  LSVSGIASAFLLGTLTWRAFGPSGFLLVATYFVIGTAATKVKMAQKEAQGVAEKRKGRRG 156
           L +SG  + FL+ T+ + A    G LL+  +F+  +  TKV   +K    V  K  G+R 
Sbjct: 29  LDLSGGIAGFLVMTIHFTAGFRYGALLL-VFFLTSSKLTKVGEDKKRRVDVEFKEGGQRN 88

Query: 157 LGSVIGSSAAGCVCALLMINNIG----------GEAFRQLWRLGFVACFCTKLSDTVSSE 216
              V+ +S    V  ++     G           E    L   G +  +     DT SSE
Sbjct: 89  WVQVLCNSGIASVLVVIACTLTGWKDKCLDSKQSEIVTALIG-GIIGHYACCNGDTWSSE 148

Query: 217 IGKAYGRITYLVTTFRIVPRGTEGAVSLEGTFAGLLAASVLAFVGCLLGDVTAS------ 276
           +G        L+TTF+ V +GT G V+  G  A L A + +     + G  TAS      
Sbjct: 149 LGVLSDAQPRLITTFKPVKKGTNGGVTKAGLLAALAAGTTVGLTFLIFGLFTASCASDVA 208

Query: 277 -EAIVCVVASQIANLGESIIGAVL 284
            + ++ +  S +A L  S+I ++L
Sbjct: 209 LKQLLVIPLSALAGLCGSLIDSIL 230

[Close]

BLAST of Carg11355 vs. TAIR 10
Match: AT5G19930.2 (Protein of unknown function DUF92, transmembrane )

HSP 1 Score: 45.4 bits (106), Expect = 8.9e-05
Identity = 55/204 (26.96%), Postives = 88/204 (43.14%), Query Frame = 0


Query: 97  LSVSGIASAFLLGTLTWRAFGPSGFLLVATYFVIGTAATKVKMAQKEAQGVAEKRKGRRG 156
           L +SG  + FL+ T+ + A    G LL+  +F+  +  TKV   +K    V  K  G+R 
Sbjct: 29  LDLSGGIAGFLVMTIHFTAGFRYGALLL-VFFLTSSKLTKVGEDKKRRVDVEFKEGGQRN 88

Query: 157 LGSVIGSSAAGCVCALLMINNIG----------GEAFRQLWRLGFVACFCTKLSDTVSSE 216
              V+ +S    V  ++     G           E    L   G +  +     DT SSE
Sbjct: 89  WVQVLCNSGIASVLVVIACTLTGWKDKCLDSKQSEIVTALIG-GIIGHYACCNGDTWSSE 148

Query: 217 IGKAYGRITYLVTTFRIVPRGTEGAVSLEGTFAGLLAASVLAFVGCLLGDVTAS------ 276
           +G        L+TTF+ V +GT G V+  G  A L A + +     + G  TAS      
Sbjct: 149 LGVLSDAQPRLITTFKPVKKGTNGGVTKAGLLAALAAGTTVGLTFLIFGLFTASCASDVA 208

Query: 277 -EAIVCVVASQIANLGESIIGAVL 284
            + ++ +  S +A L  S+I ++L
Sbjct: 209 LKQLLVIPLSALAGLCGSLIDSIL 230

The following BLAST results are available for this feature:

BLAST of Carg11355 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7015045.1	1.7e-154	100.00	Protein VTE6, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022923142.1	8.6e-151	97.95	protein VTE6, chloroplastic-like [Cucurbita moschata]	[more]
KAG6577023.1	1.1e-150	97.95	Protein VTE6, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023553437.1	3.2e-145	95.90	protein VTE6, chloroplastic-like [Cucurbita pepo subsp. pepo]	[more]
XP_022984475.1	1.3e-143	95.22	protein VTE6, chloroplastic-like [Cucurbita maxima]	[more]

BLAST of Carg11355 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SYM0	6.7e-90	63.33	Protein VTE6, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=VTE6 PE=1 SV=1	[more]
P73555	6.6e-37	45.07	Uncharacterized membrane protein sll0875 OS=Synechocystis sp. (strain PCC 6803 /...	[more]
Q58343	1.5e-12	30.05	Uncharacterized membrane protein MJ0933 OS=Methanocaldococcus jannaschii (strain...	[more]

BLAST of Carg11355 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E5C7	4.2e-151	97.95	protein VTE6, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111430893 P...	[more]
A0A6J1J8Q4	6.4e-144	95.22	protein VTE6, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111482766 PE=...	[more]
A0A6J1CPE4	5.0e-120	82.53	protein VTE6, chloroplastic isoform X1 OS=Momordica charantia OX=3673 GN=LOC1110...	[more]
A0A0A0KVG7	1.1e-119	82.35	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G083590 PE=3 SV=1	[more]
A0A5A7UZZ0	4.2e-119	82.01	Protein VTE6 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold233G00770 P...	[more]

BLAST of Carg11355 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G78620.1	4.8e-91	63.33	Protein of unknown function DUF92, transmembrane	[more]
AT1G78620.2	1.0e-88	61.49	Protein of unknown function DUF92, transmembrane	[more]
AT5G19930.1	8.9e-05	26.96	Protein of unknown function DUF92, transmembrane	[more]
AT5G19930.2	8.9e-05	26.96	Protein of unknown function DUF92, transmembrane	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002794	Protein of unknown function DUF92, TMEM19	PFAM	PF01940	DUF92	coord: 87..286 e-value: 2.2E-43 score: 148.4
IPR002794	Protein of unknown function DUF92, TMEM19	PANTHER	PTHR13353	TRANSMEMBRANE PROTEIN 19	coord: 69..286
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..43
None	No IPR available	PANTHER	PTHR13353:SF5	TRANSMEMBRANE PROTEIN 19	coord: 69..286

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg11355-RA	Carg11355-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0009706	chloroplast inner membrane
cellular_component	GO:0016021	integral component of membrane