Carg11347 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TATAATCTATTTGATTAAATGTCTGTGATGAGTAGGAGTATGAGACTCTAATCTGTGCACTTTGCATTTTCCATTTTGATTAGCATTCTGGTTGGATACGGATGAGTCCAGCAAGTTGTTTTTGGACAATATTCAATCAACGGAAGGTGAAACATGTTTCAAGCAATGGAGAACAGGTAAGCTTTCTCTTTCATTTGTTCTCTCTTGAAGATATGAATTAAGGCTATAGTAACAGTCTTTTCATCGTTCTCTATTTCTTCATGCATGTTCGTATATTGCAATGTTTTATATATATTGTTTTTTTGTTGGGAACTTAGCAGGAACCTCATTATTTGGGCATAAAAAAGGGAATTGATTAGGTTGGTTGTGAAGATTACTCGGTTCAATAATTTTTTGGCTTTTAGTCTCGTATTTTGTGCGTCGTCTCTGGTTACGAACTTCTGCTGAAGTACAGAACCAGGAGAAACTTATTCAAATTTAAATTTGACGTTTAATTTCTCTACCTAATATTTGGAGGTATAAGCTTCCTAATTTATTGATTATTGCTTGGAGTTTTACCTTGTTCATCATATCACTGAAATATTTGTTTCTCATAAAAAAATCACATCAGTTATTGTGGTAGTTTGTTAAAGCTTTATCTGTCTCTTGCTTTCCTTTTGAATGAACCTCTCATGAGAACAAATTGAGATTGAAAAATTATTTTTCTAAACAAAAACTTAGTGAAATATGATGTCTCTGTTATTATGGAATTCTTAACTCGCTTCTCCATTTTCCCACTTATGCTCCTCTTCAAATAACTACATTTGCACTTGTTCTTATCAAAATTTCAGTTATTGTAAGTTGCTCTGTCTTGTTCATGGGTCAGGTACACGTAAAGACAGGAAAATCCAATGGTTCCCCTAATGGGAAGAGTGAAGATTTAGCTGCAACTCGAATTCAAAATGCATTTCGCTCATTTACGGTATATTGAATGTGCTTAATAATTTGTTACCTATCTATTTTGCTTTCTTCTGATGATCGATTGAGCTGCTTCCCGTAGCTTTACCATGTTGCTTTATTTCCAGCTCCCTTGGATCCAATTTGTTGGCCAACTTATGCCCCTACAATAAATTATAAACGCTGGAGTTGCTTCTTTAGAGATCAGAATCAGTGATTCGTATACTGTCTTTTGGTTATTTTTCAATGGCGTTGTCTTAAATGTTATTCCCATTTCCCAGTTCATGGTTTTTGATTAACCGATGGAACAAGGAAGAGCAATCCAAACAATATCAGCAACAAGAACGAAGTCATAATCTTCTTGTTTCTCGTGAACTAACTAACAAAGAATCTTGAATCCAACTACTTTGGTTCTGATTCATAATAACTTTTTATTGAGGCTTGCCTTCACTCGACTTAGATATTATTGTTTGTGATGCTGAAACAACGTCTTTACATTCCAGGCATATTTAGAGTTCAGTTTTTTCCAGATTCATATCTAAAGATGAGTTCTTCAGGTATTATCTTGTCATTTTGTGCCTTTGTTGGCCACAATACTTGTGATTGCCTAACCTATAATTTTGTATGATGCTGATGCGGTCAACGTTTATACTAACCAAAGGAGATTCCAACATTACCTATGATCTATTTGTTATACAGACATGTACCTCGATGGTAATAACGAATGAATCGATCATTTTTTATGAGATGGTTTAATCTTTTGTCTTCCAGGCCAGAAAGATTGTACATGATTCGAAAGGGCCAGAGAGGTGCCAGGTTCTAATTCAAGGTGAAACGGCTACAAAACATGTGTTAAGCTTCATTCATTCATGGAGCAGAATGCAGCAAGAAATTAGAACACGTAGACTCTGTATGGTCACAGAATATCGAATCAAACAAAAGAAACAGGAAAATCAGCTGAAGCTTGAGGCTAAAATTCATGAACTTGAAGTAAGTGCCATTAACTGTCTTCCATGAATTTTTTAATATTCTGATTGAATACTCATTTTCTACTGGGAAAGTTGAACAAAATCTTTTCGGGTTTGTTCGAATCTTAGGAGATCAGCGTTATCATTGCTTTGGTTGCTGCTTAAAACGGTCATGCTTACATAGGAGGTGTATGGGAAATAGCATAGTTATGAAATATTCTGTTTGTTAACTCACTTATATTTTATTTTGTTTACTCATTTATAATCCACTGCTTAATAGCGATTAAAGAAAATCAGGGGATTCTTTTTAATATCTACTTCAACAATCTAGGATCCATAAAATCTTTCCAAATTAGTCGTTTTTAGCCATTTTATATAATATTTTACTGTAGAGCTATTTTAAAAATATTATTTAAAATTTTTTAAATTTTCATTTGGTACTCTTTTTATTTCATTATTTGTTTTTATTTTTTAAATAAGCTTGCATGGTCACCTTTTTTAACGTTTAATTTTTCTGTTTAAAATCTTAGTCAAAATTTGAAATCTAATTTAATGACTTAAAGAACATGTTTCTTCTGATTACAGTTATCATTCTTCCACTCTCCAGGGAGAAAATTTTAGGGTTTCTTTCAAGTACTTGATTTGTAGCTGAAGAGTATCGTTTATCTTGACTCAATTGTCAATTTACTAAAGACATAACATTATCTGTTGTGTGATGCTCAACCATCACAGGTAGAATGGTGTGGTGGATCTGAAACAAAGGAGGAAATACTTTTCAAGATTCAGCATCGAGAAGAAGCTGCTGTGAGAAGGGAGCGTGCTATGGCGTATGCATTCTCTCATCAGGTATGCTTCATCAATCACACATGGGCCTGAATTGAATTATACTCATTCAGTTATAGAAAATTGAAACCTAACGTTTATACATATACTTGAAAAATGAAGAAAACAATAGATTTAACGAATTGGTTCTTAACATTTGCTCATCATTTGTTCTTTACAATATTATTTTTTTTTTCATTGAAAATAGTTAAGACACTTGAAAATATTGAAATACTAGTCAACCGTAGTAATTTTCCTAACTTCATCATATTTCACTTGGTCAAAACATATATTTTCAATTCAGAAGTCAGAAGTCTGAATCTCTAATCTCATATATCTCAACTAAGACATGCATTTAACAAAAATTTAGAAGTTTGAATTTCTCACTAGCTTGCCAAACAAGTTAATTATTAATTTTTTAAGTAGTGAGTGGTTTTGAATCATAAATCATTAATGAACTTTAAACCCTATTTAATACATTATTCAATGTCTTTGGGTTGTAAAAGATTGCTTAGTGGTAATCTGACCTTAGAAAAAACATTTCTTGGATTTAAATTTTATTTTGGTCCAAAAAGTTGAACACTCATTTTCCTTTGGCTCTTGTATCTTCTATTTTTCTGGGATAATTTCCAAATTTTCATAAATACTTATAGTTTGTTTTGGGGCTCATTGTTAAATATTTTGCATTGTATTTAATAAAACTCACAAGCCACATGTTTTGAATTTAATGCTAGACTGGAGAAATGACCTAAAACGCAAGTCTATATGGTATTAAGCAAATTTTTTTATAAAAATATTTAAAGTATTTGATGATAAAGATCAAAATTAACCTTCTAACTTGGTACTGAACAAAACATTCAAAAGTTTGAGGACAAAGATAAAATAAGGAAGAAAGTTGAGAGAAATAATATTCAATGAACTAAATCACTAATTGACTTCACTTATCTCATATTAAATGTTTGTTTATTGACAAGATTTCTTAACGGAACTTTACTCTTAAATTATTGCGTGCTCAAATTATTATATCATTAAAGAATTGTCTCGTCTTAGATCACTACTCACTTATTTTTCTGTCTCTTTCATATAAACTGTAGCACTCATTACTATTATCTTGAATTAAATCACTAAGCTTTCCTTTTTGATTGACATGAGTATGCTTACTTTTGGCCATTTTTTAATTTGTACGAAACCATTTCGCTTATATCCTTTTTTATTATGAAAATTAAACACAATGATGAGTGAAAACACATCAAACAGCCAAATGTACCTATTTATTACCAATTATGAAGCAAACTGAGCAAATAAATCAATGCTGAGAAGATCAAAATCAGTTGGTAAAGAGGGTATATTTTATACCTGTTGACAAATAAGAGTTCTTTATCAGCATGAAATCAGTTCCTGTTTTTGTCTGCAAATAACAAAGCCTTTAAAGGAAAATTGTGACTTTTCTGTTATGTCATTTAATGGTGAACCCCATCTGCAGTGGAGGGCCAATTCCATCTTAGATCTAAATCCGGCTTCATACAGCCTTGACAAAGAGAACTGGGGTTGGAGCTGGAAGGAGAGGTGGATTGCTGCTCGGCCATGGGAGATCCGAGCTAATACACATCCCACCATTCCAAAGAAGGTGCAGACGAAGCAAAGAAGCAAACTCAATGAAATAACATATCAACCGGGGTCTAAGGTCTCAACCTCAGCCAATCATTCTTTGTCAAACAAGGGGAGTTCAAAGGCTAGAAATTCATATATGCCCAAATGAAACAAGCTACAAGAAGCTGAAGGCCTTTTCCATATATAATCAGTCAACCCACAAACCACTGCTGACAAATTCAGTGAAATGAATTTGGT TATAATCTATTTGATTAAATGTCTGTGATGAGTAGGAGTATGAGACTCTAATCTGTGCACTTTGCATTTTCCATTTTGATTAGCATTCTGGTTGGATACGGATGAGTCCAGCAAGTTGTTTTTGGACAATATTCAATCAACGGAAGGTGAAACATGTTTCAAGCAATGGAGAACAGGTACACGTAAAGACAGGAAAATCCAATGGTTCCCCTAATGGGAAGAGTGAAGATTTAGCTGCAACTCGAATTCAAAATGCATTTCGCTCATTTACGGCCAGAAAGATTGTACATGATTCGAAAGGGCCAGAGAGGTGCCAGGTTCTAATTCAAGGTGAAACGGCTACAAAACATGTGTTAAGCTTCATTCATTCATGGAGCAGAATGCAGCAAGAAATTAGAACACGTAGACTCTGTATGGTCACAGAATATCGAATCAAACAAAAGAAACAGGAAAATCAGCTGAAGCTTGAGGCTAAAATTCATGAACTTGAAGTAGAATGGTGTGGTGGATCTGAAACAAAGGAGGAAATACTTTTCAAGATTCAGCATCGAGAAGAAGCTGCTGTGAGAAGGGAGCGTGCTATGGCGTATGCATTCTCTCATCAGTGGAGGGCCAATTCCATCTTAGATCTAAATCCGGCTTCATACAGCCTTGACAAAGAGAACTGGGGTTGGAGCTGGAAGGAGAGGTGGATTGCTGCTCGGCCATGGGAGATCCGAGCTAATACACATCCCACCATTCCAAAGAAGGTGCAGACGAAGCAAAGAAGCAAACTCAATGAAATAACATATCAACCGGGGTCTAAGGTCTCAACCTCAGCCAATCATTCTTTGTCAAACAAGGGGAGTTCAAAGGCTAGAAATTCATATATGCCCAAATGAAACAAGCTACAAGAAGCTGAAGGCCTTTTCCATATATAATCAGTCAACCCACAAACCACTGCTGACAAATTCAGTGAAATGAATTTGGT ATGAGTCCAGCAAGTTGTTTTTGGACAATATTCAATCAACGGAAGGTGAAACATGTTTCAAGCAATGGAGAACAGGTACACGTAAAGACAGGAAAATCCAATGGTTCCCCTAATGGGAAGAGTGAAGATTTAGCTGCAACTCGAATTCAAAATGCATTTCGCTCATTTACGGCCAGAAAGATTGTACATGATTCGAAAGGGCCAGAGAGGTGCCAGGTTCTAATTCAAGGTGAAACGGCTACAAAACATGTGTTAAGCTTCATTCATTCATGGAGCAGAATGCAGCAAGAAATTAGAACACGTAGACTCTGTATGGTCACAGAATATCGAATCAAACAAAAGAAACAGGAAAATCAGCTGAAGCTTGAGGCTAAAATTCATGAACTTGAAGTAGAATGGTGTGGTGGATCTGAAACAAAGGAGGAAATACTTTTCAAGATTCAGCATCGAGAAGAAGCTGCTGTGAGAAGGGAGCGTGCTATGGCGTATGCATTCTCTCATCAGTGGAGGGCCAATTCCATCTTAGATCTAAATCCGGCTTCATACAGCCTTGACAAAGAGAACTGGGGTTGGAGCTGGAAGGAGAGGTGGATTGCTGCTCGGCCATGGGAGATCCGAGCTAATACACATCCCACCATTCCAAAGAAGGTGCAGACGAAGCAAAGAAGCAAACTCAATGAAATAACATATCAACCGGGGTCTAAGGTCTCAACCTCAGCCAATCATTCTTTGTCAAACAAGGGGAGTTCAAAGGCTAGAAATTCATATATGCCCAAATGA MSPASCFWTIFNQRKVKHVSSNGEQVHVKTGKSNGSPNGKSEDLAATRIQNAFRSFTARKIVHDSKGPERCQVLIQGETATKHVLSFIHSWSRMQQEIRTRRLCMVTEYRIKQKKQENQLKLEAKIHELEVEWCGGSETKEEILFKIQHREEAAVRRERAMAYAFSHQWRANSILDLNPASYSLDKENWGWSWKERWIAARPWEIRANTHPTIPKKVQTKQRSKLNEITYQPGSKVSTSANHSLSNKGSSKARNSYMPK Homology
BLAST of Carg11347 vs. NCBI nr
Match: KAG7015037.1 (Protein IQ-DOMAIN 1 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 520.4 bits (1339), Expect = 8.9e-144 Identity = 259/259 (100.00%), Postives = 259/259 (100.00%), Query Frame = 0
BLAST of Carg11347 vs. NCBI nr
Match: KAG6577014.1 (Protein IQ-DOMAIN 1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 516.9 bits (1330), Expect = 9.9e-143 Identity = 257/259 (99.23%), Postives = 258/259 (99.61%), Query Frame = 0
BLAST of Carg11347 vs. NCBI nr
Match: XP_022922651.1 (protein IQ-DOMAIN 1-like [Cucurbita moschata] >XP_022922652.1 protein IQ-DOMAIN 1-like [Cucurbita moschata]) HSP 1 Score: 514.2 bits (1323), Expect = 6.4e-142 Identity = 256/259 (98.84%), Postives = 257/259 (99.23%), Query Frame = 0
BLAST of Carg11347 vs. NCBI nr
Match: XP_023552254.1 (protein IQ-DOMAIN 1 [Cucurbita pepo subsp. pepo] >XP_023552255.1 protein IQ-DOMAIN 1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 510.8 bits (1314), Expect = 7.1e-141 Identity = 255/259 (98.46%), Postives = 256/259 (98.84%), Query Frame = 0
BLAST of Carg11347 vs. NCBI nr
Match: XP_022984520.1 (protein IQ-DOMAIN 1 [Cucurbita maxima] >XP_022984521.1 protein IQ-DOMAIN 1 [Cucurbita maxima]) HSP 1 Score: 508.8 bits (1309), Expect = 2.7e-140 Identity = 254/259 (98.07%), Postives = 255/259 (98.46%), Query Frame = 0
BLAST of Carg11347 vs. ExPASy Swiss-Prot
Match: Q9LKA0 (Protein IQ-DOMAIN 10 OS=Arabidopsis thaliana OX=3702 GN=IQD10 PE=1 SV=1) HSP 1 Score: 211.1 bits (536), Expect = 1.5e-53 Identity = 122/243 (50.21%), Postives = 151/243 (62.14%), Query Frame = 0
BLAST of Carg11347 vs. ExPASy Swiss-Prot
Match: Q0WNP8 (Protein IQ-DOMAIN 9 OS=Arabidopsis thaliana OX=3702 GN=IQD9 PE=1 SV=1) HSP 1 Score: 199.9 bits (507), Expect = 3.5e-50 Identity = 99/187 (52.94%), Postives = 133/187 (71.12%), Query Frame = 0
BLAST of Carg11347 vs. ExPASy Swiss-Prot
Match: F4J061 (Protein IQ-DOMAIN 5 OS=Arabidopsis thaliana OX=3702 GN=IQD5 PE=1 SV=1) HSP 1 Score: 132.1 bits (331), Expect = 9.0e-30 Identity = 72/170 (42.35%), Postives = 100/170 (58.82%), Query Frame = 0
BLAST of Carg11347 vs. ExPASy Swiss-Prot
Match: O64852 (Protein IQ-DOMAIN 6 OS=Arabidopsis thaliana OX=3702 GN=IQD6 PE=1 SV=1) HSP 1 Score: 114.8 bits (286), Expect = 1.5e-24 Identity = 84/247 (34.01%), Postives = 122/247 (49.39%), Query Frame = 0
BLAST of Carg11347 vs. ExPASy Swiss-Prot
Match: F4IUJ7 (Protein IQ-DOMAIN 4 OS=Arabidopsis thaliana OX=3702 GN=IQD4 PE=1 SV=1) HSP 1 Score: 99.8 bits (247), Expect = 4.9e-20 Identity = 72/211 (34.12%), Postives = 119/211 (56.40%), Query Frame = 0
BLAST of Carg11347 vs. ExPASy TrEMBL
Match: A0A6J1E3W9 (protein IQ-DOMAIN 1-like OS=Cucurbita moschata OX=3662 GN=LOC111430594 PE=4 SV=1) HSP 1 Score: 514.2 bits (1323), Expect = 3.1e-142 Identity = 256/259 (98.84%), Postives = 257/259 (99.23%), Query Frame = 0
BLAST of Carg11347 vs. ExPASy TrEMBL
Match: A0A6J1J5H6 (protein IQ-DOMAIN 1 OS=Cucurbita maxima OX=3661 GN=LOC111482790 PE=4 SV=1) HSP 1 Score: 508.8 bits (1309), Expect = 1.3e-140 Identity = 254/259 (98.07%), Postives = 255/259 (98.46%), Query Frame = 0
BLAST of Carg11347 vs. ExPASy TrEMBL
Match: A0A0A0KVH7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G088730 PE=4 SV=1) HSP 1 Score: 433.0 bits (1112), Expect = 9.1e-118 Identity = 219/256 (85.55%), Postives = 233/256 (91.02%), Query Frame = 0
BLAST of Carg11347 vs. ExPASy TrEMBL
Match: A0A6J1CMA6 (protein IQ-DOMAIN 1 OS=Momordica charantia OX=3673 GN=LOC111012770 PE=4 SV=1) HSP 1 Score: 416.8 bits (1070), Expect = 6.7e-113 Identity = 215/257 (83.66%), Postives = 231/257 (89.88%), Query Frame = 0
BLAST of Carg11347 vs. ExPASy TrEMBL
Match: A0A5D3D7L8 (Protein IQ-DOMAIN 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold416G00700 PE=4 SV=1) HSP 1 Score: 397.1 bits (1019), Expect = 5.5e-107 Identity = 207/253 (81.82%), Postives = 222/253 (87.75%), Query Frame = 0
BLAST of Carg11347 vs. TAIR 10
Match: AT3G15050.1 (IQ-domain 10 ) HSP 1 Score: 211.1 bits (536), Expect = 1.1e-54 Identity = 122/243 (50.21%), Postives = 151/243 (62.14%), Query Frame = 0
BLAST of Carg11347 vs. TAIR 10
Match: AT2G33990.1 (IQ-domain 9 ) HSP 1 Score: 199.9 bits (507), Expect = 2.5e-51 Identity = 99/187 (52.94%), Postives = 133/187 (71.12%), Query Frame = 0
BLAST of Carg11347 vs. TAIR 10
Match: AT3G22190.1 (IQ-domain 5 ) HSP 1 Score: 132.1 bits (331), Expect = 6.4e-31 Identity = 72/170 (42.35%), Postives = 100/170 (58.82%), Query Frame = 0
BLAST of Carg11347 vs. TAIR 10
Match: AT3G22190.2 (IQ-domain 5 ) HSP 1 Score: 132.1 bits (331), Expect = 6.4e-31 Identity = 72/170 (42.35%), Postives = 100/170 (58.82%), Query Frame = 0
BLAST of Carg11347 vs. TAIR 10
Match: AT2G26180.1 (IQ-domain 6 ) HSP 1 Score: 114.8 bits (286), Expect = 1.1e-25 Identity = 84/247 (34.01%), Postives = 122/247 (49.39%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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