Carg11212 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATCACTTTCTTTCTCGCCGTCGTTTCCCTTCATCCCAAGTTTCGACTCTCTAACCGCAGCTACCGTCGCCGTCCTTCACTGTGCCTTATCGGCGCCGACATAGCCCACTTCACCTGCTGTATGAACGACAAACCGAGTGGTTGAACTCTAGTAATGAATTCGTTGTCGCGAAACCTATCTTGCTCCATCAGATCTTCGTTGCACACCAATTGCCTGCAGCACCTTCACTATCAGCAGCAGCAATGGAGGGGGATCAGAGTGAAGGTACTGAATGGAAATTTGGAGCGGGCACTGACATTTTTGCAAAGGAAGATGCGATCGAGCGGAATTGAGCGGCTGATTAAGCGTGAACAGACTCATCATATAAAGAATTCTGAGAAACGAGTTTTGGCCAGAAAGAATTTGGAGCGCAAAATTCGATCGCAGGACCTCGCTCGCAAGCTCAAAGCCATCCTTATAAAGAAAGTCAGGTATTTGTAAATCTTTTCCTTCAACAATAAGCTATTTGCGCGATGTTGCTAGTGTTCGAATGGATTCTGCATAGTGGCCTGATCGTATGGTTCTTCTAGCTTTGTTTATAATGTGCTTGCCTAGTTTTAGCGACTAGCGATTGCTTAGAACTTGAAGTGTGTACTTGGTACAATCAAGTGCAACACGTTTCTGCCCGTAGAACTGTAAGAAAATTTGACTTCGTGCCCAAACCATCAACAACCTATTGCTAGCACAATGTCTATGATTCAGAGTAAAGTTAAAATGCTGAAGGAAAGATACAATCGAACATGATCATGTATTCTGTTGAAATTCTTTTAGGAATTGTTGAGTTGGCAATACTGGCGATCATTAAAGAGAACAAGATCAAGTTATCTGTTCTTATCAATTCAGTTCTTTGGAGTTGTTTAGAAGATTATCGATGACCGACCTCCCTTGACATTATCAAAGACTTCATCCAGCAAATCCTTTAAGATCATCAGTTCGAAAACAAAGCCAATACATTTGAACTAATTTATGAATAACCCAGCTTTCATTTAGAAGAATTGAAAGAATTCAGGATCATACAAAAAAAGGGAGGCAAACTACAAAAAGGACCTCCAATCAAGAGAAATATGAATCAAGGATAATTGCAGAAGTGTTTAGTAATTCAAGCCATAAGGACAAAATTCTCATACTCCAACTTGCCACAAGAAACTAACCAATATCAGTATGCTTATGCAGAATCTCACATGCCTGGCTAAAATTTTATTTAGTTTAAAGAGAATAGAACCAGGGATTTCTAGACTTGTTCAGGATATCTTAGAAGGATTATTTAGTATCTTTAAATATTTTTAAAAAATATATTATTGCCTAGCATCTTTAGCTCAAAGAAGCTGTATCTTTCAAGCGCTACTTGGAGTTTTACTTCTCCTTCTTTTAATTAAGTAGTTGCTTATTTTCTCAAGTCGAGAAAAGAAATTGATTTGGACTAAACTTGGACAGAATTATTCATTATGCACATGATTGAACGAGGAAAAAAACGGCTTGGATTAACTTAAAAGAATAAACGAATGTAACGAGAAGATTGTTCCGAGAAAAGTGTGGTTTTTGCTTTTGGATTCTCCCTCTGCTTTCTAACTTCAACTTTATCATCTGATTTGTTGCAGGGGTCTGTAAGCATGTGGTATGTGGCATTATAGTTTCACAGGCATCTCCTCTTAACTATGGCTGCCTCTTAAAAGTGCAATTGAAGTTCCTTTATTCAGCAGGAAGGCGCCAACGAGCTGTTTATCTTACATGGCTTTCTATCGTTCTGTTTTCTCTTATCTGAGCAATATTGCTGCCCGCTATGGTACCTCCCAAATTCTGTTGTTCCTCTTTTGAAATATATTAAAAATTGCCCATAAGGGTCCTATAATAGTGAGTTTAAAGGGAGCGGACTCGAATCAATGTTGGCCACTTAGATTTAACATCTTACACCTGTTTTTGGTGTCTAGATGTTGTATGGGTCAAGTGGGTTATCTCGTGATATTAGTCGTAAGGGTCAAGTGGGTTATCTCGTGATATTAGTCGTAAGGGTCATGGGTATAATAAGGAGTTTAGAGGGAGTGAATTTAATCAATGGTGACCACTTAGATTTAACATCTTACTCGTGTTTTTGGTGTCTAGATGTTGT ATCACTTTCTTTCTCGCCGTCGTTTCCCTTCATCCCAAGTTTCGACTCTCTAACCGCAGCTACCGTCGCCGTCCTTCACTGTGCCTTATCGGCGCCGACATAGCCCACTTCACCTGCTGTATGAACGACAAACCGAGTGGTTGAACTCTAGTAATGAATTCGTTGTCGCGAAACCTATCTTGCTCCATCAGATCTTCGTTGCACACCAATTGCCTGCAGCACCTTCACTATCAGCAGCAGCAATGGAGGGGGATCAGAGTGAAGGTACTGAATGGAAATTTGGAGCGGGCACTGACATTTTTGCAAAGGAAGATGCGATCGAGCGGAATTGAGCGGCTGATTAAGCGTGAACAGACTCATCATATAAAGAATTCTGAGAAACGAGTTTTGGCCAGAAAGAATTTGGAGCGCAAAATTCGATCGCAGGACCTCGCTCGCAAGCTCAAAGCCATCCTTATAAAGAAAGTCAGGGGTCTGTAAGCATGTGGTATGTGGCATTATAGTTTCACAGGCATCTCCTCTTAACTATGGCTGCCTCTTAAAAGTGCAATTGAAGTTCCTTTATTCAGCAGGAAGGCGCCAACGAGCTGTTTATCTTACATGGCTTTCTATCGTTCTGTTTTCTCTTATCTGAGCAATATTGCTGCCCGCTATGGTACCTCCCAAATTCTGTTGTTCCTCTTTTGAAATATATTAAAAATTGCCCATAAGGGTCCTATAATAGTGAGTTTAAAGGGAGCGGACTCGAATCAATGTTGGCCACTTAGATTTAACATCTTACACCTGTTTTTGGTGTCTAGATGTTGTATGGGTCAAGTGGGTTATCTCGTGATATTAGTCGTAAGGGTCAAGTGGGTTATCTCGTGATATTAGTCGTAAGGGTCATGGGTATAATAAGGAGTTTAGAGGGAGTGAATTTAATCAATGGTGACCACTTAGATTTAACATCTTACTCGTGTTTTTGGTGTCTAGATGTTGT ATGAATTCGTTGTCGCGAAACCTATCTTGCTCCATCAGATCTTCGTTGCACACCAATTGCCTGCAGCACCTTCACTATCAGCAGCAGCAATGGAGGGGGATCAGAGTGAAGGTACTGAATGGAAATTTGGAGCGGGCACTGACATTTTTGCAAAGGAAGATGCGATCGAGCGGAATTGAGCGGCTGATTAAGCGTGAACAGACTCATCATATAAAGAATTCTGAGAAACGAGTTTTGGCCAGAAAGAATTTGGAGCGCAAAATTCGATCGCAGGACCTCGCTCGCAAGCTCAAAGCCATCCTTATAAAGAAAGTCAGGGGTCTGTAA MNSLSRNLSCSIRSSLHTNCLQHLHYQQQQWRGIRVKVLNGNLERALTFLQRKMRSSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARKLKAILIKKVRGL Homology
BLAST of Carg11212 vs. NCBI nr
Match: KAG6581566.1 (Cycloartenol-C-24-methyltransferase, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 203.0 bits (515), Expect = 1.3e-48 Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 0
BLAST of Carg11212 vs. NCBI nr
Match: XP_022934889.1 (uncharacterized protein LOC111441929 [Cucurbita moschata] >XP_023526273.1 uncharacterized protein LOC111789807 [Cucurbita pepo subsp. pepo] >KAG7018073.1 hypothetical protein SDJN02_19939 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 203.0 bits (515), Expect = 1.3e-48 Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 0
BLAST of Carg11212 vs. NCBI nr
Match: XP_022982723.1 (uncharacterized protein LOC111481507 [Cucurbita maxima]) HSP 1 Score: 199.1 bits (505), Expect = 1.9e-47 Identity = 105/108 (97.22%), Postives = 108/108 (100.00%), Query Frame = 0
BLAST of Carg11212 vs. NCBI nr
Match: KAG6573697.1 (hypothetical protein SDJN03_27584, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 174.5 bits (441), Expect = 5.0e-40 Identity = 96/108 (88.89%), Postives = 100/108 (92.59%), Query Frame = 0
BLAST of Carg11212 vs. NCBI nr
Match: XP_022945130.1 (uncharacterized protein LOC111449463 [Cucurbita moschata] >XP_023541241.1 uncharacterized protein LOC111801465 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 174.5 bits (441), Expect = 5.0e-40 Identity = 96/108 (88.89%), Postives = 100/108 (92.59%), Query Frame = 0
BLAST of Carg11212 vs. ExPASy TrEMBL
Match: A0A6J1F3V2 (uncharacterized protein LOC111441929 OS=Cucurbita moschata OX=3662 GN=LOC111441929 PE=3 SV=1) HSP 1 Score: 203.0 bits (515), Expect = 6.4e-49 Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 0
BLAST of Carg11212 vs. ExPASy TrEMBL
Match: A0A6J1J5L6 (uncharacterized protein LOC111481507 OS=Cucurbita maxima OX=3661 GN=LOC111481507 PE=3 SV=1) HSP 1 Score: 199.1 bits (505), Expect = 9.2e-48 Identity = 105/108 (97.22%), Postives = 108/108 (100.00%), Query Frame = 0
BLAST of Carg11212 vs. ExPASy TrEMBL
Match: A0A6J1G018 (uncharacterized protein LOC111449463 OS=Cucurbita moschata OX=3662 GN=LOC111449463 PE=3 SV=1) HSP 1 Score: 174.5 bits (441), Expect = 2.4e-40 Identity = 96/108 (88.89%), Postives = 100/108 (92.59%), Query Frame = 0
BLAST of Carg11212 vs. ExPASy TrEMBL
Match: A0A6J1DEG8 (uncharacterized protein LOC111019699 OS=Momordica charantia OX=3673 GN=LOC111019699 PE=3 SV=1) HSP 1 Score: 173.7 bits (439), Expect = 4.1e-40 Identity = 97/112 (86.61%), Postives = 103/112 (91.96%), Query Frame = 0
BLAST of Carg11212 vs. ExPASy TrEMBL
Match: A0A6J1HQF3 (uncharacterized protein LOC111466431 OS=Cucurbita maxima OX=3661 GN=LOC111466431 PE=3 SV=1) HSP 1 Score: 172.9 bits (437), Expect = 7.1e-40 Identity = 95/108 (87.96%), Postives = 100/108 (92.59%), Query Frame = 0
BLAST of Carg11212 vs. TAIR 10
Match: AT3G26360.1 (Ribosomal protein S21 family protein ) HSP 1 Score: 112.8 bits (281), Expect = 1.7e-25 Identity = 62/85 (72.94%), Postives = 75/85 (88.24%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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