Carg11114 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg11114
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionLINE-1 retrotransposable element ORF2 protein
LocationCarg_Chr08: 5441631 .. 5442880 (-)
RNA-Seq ExpressionCarg11114
SyntenyCarg11114
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTCGGAATAATGATAGCGCCCGTGTTTCCTCTAGTGAACGCCGTCTCCCCTCTGACACAAATAGCAACGCAAGCCGACGTGGACATATCGCCGGTGAGCTTCACCCTAACAGTGTCCCAATACTTCCCTCGCTTCCTTACAGTGCTTCAACTGACCCCTCACTTCTTCGCATCCTTCTTAGTGACTCAGAATCTGAACGCCAGAATTTGCCTCGACTCATTCCACACCACATTGATATCCGCCCATCAGCTCTCCGCCGTCTCCATCAACCTCGTCGAGGTTTCCCGTTGCCTCCTTCTCGCCCATGAGAATACCGGTAAACACACCCTCTTTCTTTCTTTATCTATCAAGATTTTGATATTGATTTCTTGCTCCCTTTTTAGATACTGAACTTCTCGAGCGAAAGATGCTCGAATTGCTGCCTCCAGAACACAACGATGATCTTGGCGACATTGACTTCACCAACTGTGTTTCTATTCATTTAAGGGATTTTAGACGCATTGTTCATCAAGAGCTCTCTGTGTCCTACCGAGATCGAGGTAACCCATTTCTTTCCTTCTCTTTTTTTTCTAATTTAGGGGATGACTGTGGGTTGGGTTTATAAAAAGTAAGGAAGAGGGAGTCCCAGATTGACTAATTTAGGGGATGATCGAGGGTTGGGTTTATAAGTAAGGAATACGTTTCTATTGGTATGAAGTGTTTTGGGAGAGTCCAAAGCAAACCACAGGAGCTTATACTTAAAGTGGACAATATCATACTAATATGGAGGGTCGTTATTCCTAACATTAAGCTTGTTGCAGTTTGCATTACGACATCGGAGTCTCAAATCAAGCTATCCGTCGGCGACAAAAAGACCATTCTTACTCGAGAGGTACGAGAAAACTTGGTGTAAGATTCGAAAGGGTTGGAACTGAAAAGAGGGTAATAATGTATGTGGTGGTGCAGAGAGGAGAATATGTGAATATCAATCCTCAAGGAGTCGAGACTCGATTTGAATTCAGTATCCATCCCACTTCGTTTTTCAATAATCTGACTGATAAATCCAGAAGGGTTTGGTTCATGAAGACTACTAATTCCTTAAGTATAATTTGTGTTCCTTTTGCATGTTGTGGTTGCTATTTGATGTATTTTCCCCCATGTTCTTGAAAAGTGTTGATATTGTTTGAATGTTTTCTTCTGATTCGTTGATATCAAAGGGATTGCAAATATATGGTGTCAATTTTCTTGTACAGAAAGAATTAGATTAA

mRNA sequence

ATGCTCGGAATAATGATAGCGCCCGTGTTTCCTCTAGTGAACGCCGTCTCCCCTCTGACACAAATAGCAACGCAAGCCGACGTGGACATATCGCCGGTGAGCTTCACCCTAACAGTGTCCCAATACTTCCCTCGCTTCCTTACAGTGCTTCAACTGACCCCTCACTTCTTCGCATCCTTCTTAGTGACTCAGAATCTGAACGCCAGAATTTGCCTCGACTCATTCCACACCACATTGATATCCGCCCATCAGCTCTCCGCCGTCTCCATCAACCTCGTCGAGGTTTCCCGTTGCCTCCTTCTCGCCCATGAGAATACCGATACTGAACTTCTCGAGCGAAAGATGCTCGAATTGCTGCCTCCAGAACACAACGATGATCTTGGCGACATTGACTTCACCAACTGTGTTTCTATTCATTTAAGGGATTTTAGACGCATTGTTCATCAAGAGCTCTCTGTGTCCTACCGAGATCGAGTTTGCATTACGACATCGGAGTCTCAAATCAAGCTATCCGTCGGCGACAAAAAGACCATTCTTACTCGAGAGAGAGGAGAATATGTGAATATCAATCCTCAAGGAGTCGAGACTCGATTTGAATTCAGTATCCATCCCACTTCGTTTTTCAATAATCTGACTGATAAATCCAGAAGGAAAGAATTAGATTAA

Coding sequence (CDS)

ATGCTCGGAATAATGATAGCGCCCGTGTTTCCTCTAGTGAACGCCGTCTCCCCTCTGACACAAATAGCAACGCAAGCCGACGTGGACATATCGCCGGTGAGCTTCACCCTAACAGTGTCCCAATACTTCCCTCGCTTCCTTACAGTGCTTCAACTGACCCCTCACTTCTTCGCATCCTTCTTAGTGACTCAGAATCTGAACGCCAGAATTTGCCTCGACTCATTCCACACCACATTGATATCCGCCCATCAGCTCTCCGCCGTCTCCATCAACCTCGTCGAGGTTTCCCGTTGCCTCCTTCTCGCCCATGAGAATACCGATACTGAACTTCTCGAGCGAAAGATGCTCGAATTGCTGCCTCCAGAACACAACGATGATCTTGGCGACATTGACTTCACCAACTGTGTTTCTATTCATTTAAGGGATTTTAGACGCATTGTTCATCAAGAGCTCTCTGTGTCCTACCGAGATCGAGTTTGCATTACGACATCGGAGTCTCAAATCAAGCTATCCGTCGGCGACAAAAAGACCATTCTTACTCGAGAGAGAGGAGAATATGTGAATATCAATCCTCAAGGAGTCGAGACTCGATTTGAATTCAGTATCCATCCCACTTCGTTTTTCAATAATCTGACTGATAAATCCAGAAGGAAAGAATTAGATTAA

Protein sequence

MLGIMIAPVFPLVNAVSPLTQIATQADVDISPVSFTLTVSQYFPRFLTVLQLTPHFFASFLVTQNLNARICLDSFHTTLISAHQLSAVSINLVEVSRCLLLAHENTDTELLERKMLELLPPEHNDDLGDIDFTNCVSIHLRDFRRIVHQELSVSYRDRVCITTSESQIKLSVGDKKTILTRERGEYVNINPQGVETRFEFSIHPTSFFNNLTDKSRRKELD
Homology
BLAST of Carg11114 vs. NCBI nr
Match: KAG7026022.1 (hypothetical protein SDJN02_12520, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 428.3 bits (1100), Expect = 3.9e-116
Identity = 221/221 (100.00%), Postives = 221/221 (100.00%), Query Frame = 0

Query: 1   MLGIMIAPVFPLVNAVSPLTQIATQADVDISPVSFTLTVSQYFPRFLTVLQLTPHFFASF 60
           MLGIMIAPVFPLVNAVSPLTQIATQADVDISPVSFTLTVSQYFPRFLTVLQLTPHFFASF
Sbjct: 1   MLGIMIAPVFPLVNAVSPLTQIATQADVDISPVSFTLTVSQYFPRFLTVLQLTPHFFASF 60

Query: 61  LVTQNLNARICLDSFHTTLISAHQLSAVSINLVEVSRCLLLAHENTDTELLERKMLELLP 120
           LVTQNLNARICLDSFHTTLISAHQLSAVSINLVEVSRCLLLAHENTDTELLERKMLELLP
Sbjct: 61  LVTQNLNARICLDSFHTTLISAHQLSAVSINLVEVSRCLLLAHENTDTELLERKMLELLP 120

Query: 121 PEHNDDLGDIDFTNCVSIHLRDFRRIVHQELSVSYRDRVCITTSESQIKLSVGDKKTILT 180
           PEHNDDLGDIDFTNCVSIHLRDFRRIVHQELSVSYRDRVCITTSESQIKLSVGDKKTILT
Sbjct: 121 PEHNDDLGDIDFTNCVSIHLRDFRRIVHQELSVSYRDRVCITTSESQIKLSVGDKKTILT 180

Query: 181 RERGEYVNINPQGVETRFEFSIHPTSFFNNLTDKSRRKELD 222
           RERGEYVNINPQGVETRFEFSIHPTSFFNNLTDKSRRKELD
Sbjct: 181 RERGEYVNINPQGVETRFEFSIHPTSFFNNLTDKSRRKELD 221

BLAST of Carg11114 vs. NCBI nr
Match: XP_022999836.1 (uncharacterized protein LOC111494189 [Cucurbita maxima])

HSP 1 Score: 305.4 bits (781), Expect = 3.9e-79
Identity = 153/156 (98.08%), Postives = 156/156 (100.00%), Query Frame = 0

Query: 62  VTQNLNARICLDSFHTTLISAHQLSAVSINLVEVSRCLLLAHENTDTELLERKMLELLPP 121
           VTQNLNARICLDSFHTTLISAHQLSAVSINL+EVSRCLLLAHENTDTELLERKML+LLPP
Sbjct: 80  VTQNLNARICLDSFHTTLISAHQLSAVSINLLEVSRCLLLAHENTDTELLERKMLKLLPP 139

Query: 122 EHNDDLGDIDFTNCVSIHLRDFRRIVHQELSVSYRDRVCITTSESQIKLSVGDKKTILTR 181
           EHNDDLGDIDFTNCVSIHLRDFRRIVHQELSVSY+DRVCITTSESQIKLSVGDKKTILTR
Sbjct: 140 EHNDDLGDIDFTNCVSIHLRDFRRIVHQELSVSYQDRVCITTSESQIKLSVGDKKTILTR 199

Query: 182 ERGEYVNINPQGVETRFEFSIHPTSFFNNLTDKSRR 218
           ERGEYVNINPQGVETRFEFSIHPTSFFNNLTDKSRR
Sbjct: 200 ERGEYVNINPQGVETRFEFSIHPTSFFNNLTDKSRR 235

BLAST of Carg11114 vs. NCBI nr
Match: XP_022964069.1 (uncharacterized protein LOC111464206 [Cucurbita moschata])

HSP 1 Score: 305.1 bits (780), Expect = 5.0e-79
Identity = 156/157 (99.36%), Postives = 156/157 (99.36%), Query Frame = 0

Query: 62  VTQNLNARICLDSFHTTLISAHQLSAVSINLVEVSRCLLLAHENTDTELLERKMLELLPP 121
           VTQNLNARICLDSFHTTLISAHQLSAVSINLVEVSRCLLLAHENTDTELLERKMLELLPP
Sbjct: 60  VTQNLNARICLDSFHTTLISAHQLSAVSINLVEVSRCLLLAHENTDTELLERKMLELLPP 119

Query: 122 EHNDDLGDIDFTNCVSIHLRDFRRIVHQELSVSYRDRVCITTSESQIKLSVGDKKTILTR 181
           EHNDDLGDIDFTNCVSIHLRDFRRIVHQELSVSYRDRVCITTSESQIKLSVGDKKTILTR
Sbjct: 120 EHNDDLGDIDFTNCVSIHLRDFRRIVHQELSVSYRDRVCITTSESQIKLSVGDKKTILTR 179

Query: 182 ERGEYVNINPQ-GVETRFEFSIHPTSFFNNLTDKSRR 218
           ERGEYVNINPQ GVETRFEFSIHPTSFFNNLTDKSRR
Sbjct: 180 ERGEYVNINPQEGVETRFEFSIHPTSFFNNLTDKSRR 216

BLAST of Carg11114 vs. NCBI nr
Match: XP_023514482.1 (uncharacterized protein LOC111778741 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 303.1 bits (775), Expect = 1.9e-78
Identity = 154/157 (98.09%), Postives = 156/157 (99.36%), Query Frame = 0

Query: 62  VTQNLNARICLDSFHTTLISAHQLSAVSINLVEVSRCLLLAHENTDTELLERKMLELLPP 121
           VTQNLNARICLDSFHTTLISAHQLSAVSINL+EVSRCLLLAHENTDTELLERKMLELLPP
Sbjct: 97  VTQNLNARICLDSFHTTLISAHQLSAVSINLIEVSRCLLLAHENTDTELLERKMLELLPP 156

Query: 122 EHNDDLGDIDFTNCVSIHLRDFRRIVHQELSVSYRDRVCITTSESQIKLSVGDKKTILTR 181
           EHNDDLGDIDFTNCVSIHLRDFRRIVHQELSVSY+DRVCITTSESQIKLSVGDKKTILTR
Sbjct: 157 EHNDDLGDIDFTNCVSIHLRDFRRIVHQELSVSYQDRVCITTSESQIKLSVGDKKTILTR 216

Query: 182 ERGEYVNINP-QGVETRFEFSIHPTSFFNNLTDKSRR 218
           ERGEYVNINP QGVETRFEFSIHPTSFFNNLTDKSRR
Sbjct: 217 ERGEYVNINPQQGVETRFEFSIHPTSFFNNLTDKSRR 253

BLAST of Carg11114 vs. NCBI nr
Match: XP_022145570.1 (uncharacterized protein LOC111014988 [Momordica charantia])

HSP 1 Score: 169.9 bits (429), Expect = 2.5e-38
Identity = 98/215 (45.58%), Postives = 140/215 (65.12%), Query Frame = 0

Query: 1   MLGIMIAPVFPLVNAVSPLTQIATQADVDISPVSFTLTVSQYFPRFLTVLQLTPHFFASF 60
           M  I + P+ PL +A+  LT+IAT+ADV  SP  F + VSQ  P F+  LQ++P FF SF
Sbjct: 1   MFLIRLQPIAPLFDAICSLTRIATRADVKFSPTKFCIIVSQISPPFIAALQMSPEFFTSF 60

Query: 61  LVTQNLNARICLDSFHTTLISAHQLSAVSINLVEVSRCLLLAHENTDTELLERKMLELLP 120
            V  N  +RICLDS H+ L+      A++ +L+E    LLL  EN+      R+ L+L P
Sbjct: 61  AVDGNHTSRICLDSLHSILMDGRLYPAMTFHLLENQNRLLLRFENSRNLPRGRRELDLSP 120

Query: 121 PEHNDDLGDIDFTNCVSIHLRDFRRIVHQELSVSYRDRVCITTSESQIKLSVGDKKTILT 180
            E  +D+G+ID+ NCVSI   +FR IV  +LS  +  R+C T ++SQ+K SV +++ ILT
Sbjct: 121 SE-EEDVGEIDYGNCVSIGSDEFRSIV-TKLSAYFNHRICATLTDSQVKFSVANEEIILT 180

Query: 181 RERGEYVNINPQ-GVETRFEFSIHPTSFFNNLTDK 215
           +E G+ + I P+ GVET+FEF++HPTSFF +L DK
Sbjct: 181 KEGGQCLIIAPERGVETKFEFTLHPTSFFYDLADK 213

BLAST of Carg11114 vs. ExPASy TrEMBL
Match: A0A6J1KE78 (uncharacterized protein LOC111494189 OS=Cucurbita maxima OX=3661 GN=LOC111494189 PE=4 SV=1)

HSP 1 Score: 305.4 bits (781), Expect = 1.9e-79
Identity = 153/156 (98.08%), Postives = 156/156 (100.00%), Query Frame = 0

Query: 62  VTQNLNARICLDSFHTTLISAHQLSAVSINLVEVSRCLLLAHENTDTELLERKMLELLPP 121
           VTQNLNARICLDSFHTTLISAHQLSAVSINL+EVSRCLLLAHENTDTELLERKML+LLPP
Sbjct: 80  VTQNLNARICLDSFHTTLISAHQLSAVSINLLEVSRCLLLAHENTDTELLERKMLKLLPP 139

Query: 122 EHNDDLGDIDFTNCVSIHLRDFRRIVHQELSVSYRDRVCITTSESQIKLSVGDKKTILTR 181
           EHNDDLGDIDFTNCVSIHLRDFRRIVHQELSVSY+DRVCITTSESQIKLSVGDKKTILTR
Sbjct: 140 EHNDDLGDIDFTNCVSIHLRDFRRIVHQELSVSYQDRVCITTSESQIKLSVGDKKTILTR 199

Query: 182 ERGEYVNINPQGVETRFEFSIHPTSFFNNLTDKSRR 218
           ERGEYVNINPQGVETRFEFSIHPTSFFNNLTDKSRR
Sbjct: 200 ERGEYVNINPQGVETRFEFSIHPTSFFNNLTDKSRR 235

BLAST of Carg11114 vs. ExPASy TrEMBL
Match: A0A6J1HM20 (uncharacterized protein LOC111464206 OS=Cucurbita moschata OX=3662 GN=LOC111464206 PE=4 SV=1)

HSP 1 Score: 305.1 bits (780), Expect = 2.4e-79
Identity = 156/157 (99.36%), Postives = 156/157 (99.36%), Query Frame = 0

Query: 62  VTQNLNARICLDSFHTTLISAHQLSAVSINLVEVSRCLLLAHENTDTELLERKMLELLPP 121
           VTQNLNARICLDSFHTTLISAHQLSAVSINLVEVSRCLLLAHENTDTELLERKMLELLPP
Sbjct: 60  VTQNLNARICLDSFHTTLISAHQLSAVSINLVEVSRCLLLAHENTDTELLERKMLELLPP 119

Query: 122 EHNDDLGDIDFTNCVSIHLRDFRRIVHQELSVSYRDRVCITTSESQIKLSVGDKKTILTR 181
           EHNDDLGDIDFTNCVSIHLRDFRRIVHQELSVSYRDRVCITTSESQIKLSVGDKKTILTR
Sbjct: 120 EHNDDLGDIDFTNCVSIHLRDFRRIVHQELSVSYRDRVCITTSESQIKLSVGDKKTILTR 179

Query: 182 ERGEYVNINPQ-GVETRFEFSIHPTSFFNNLTDKSRR 218
           ERGEYVNINPQ GVETRFEFSIHPTSFFNNLTDKSRR
Sbjct: 180 ERGEYVNINPQEGVETRFEFSIHPTSFFNNLTDKSRR 216

BLAST of Carg11114 vs. ExPASy TrEMBL
Match: A0A6J1CUU8 (uncharacterized protein LOC111014988 OS=Momordica charantia OX=3673 GN=LOC111014988 PE=4 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 1.2e-38
Identity = 98/215 (45.58%), Postives = 140/215 (65.12%), Query Frame = 0

Query: 1   MLGIMIAPVFPLVNAVSPLTQIATQADVDISPVSFTLTVSQYFPRFLTVLQLTPHFFASF 60
           M  I + P+ PL +A+  LT+IAT+ADV  SP  F + VSQ  P F+  LQ++P FF SF
Sbjct: 1   MFLIRLQPIAPLFDAICSLTRIATRADVKFSPTKFCIIVSQISPPFIAALQMSPEFFTSF 60

Query: 61  LVTQNLNARICLDSFHTTLISAHQLSAVSINLVEVSRCLLLAHENTDTELLERKMLELLP 120
            V  N  +RICLDS H+ L+      A++ +L+E    LLL  EN+      R+ L+L P
Sbjct: 61  AVDGNHTSRICLDSLHSILMDGRLYPAMTFHLLENQNRLLLRFENSRNLPRGRRELDLSP 120

Query: 121 PEHNDDLGDIDFTNCVSIHLRDFRRIVHQELSVSYRDRVCITTSESQIKLSVGDKKTILT 180
            E  +D+G+ID+ NCVSI   +FR IV  +LS  +  R+C T ++SQ+K SV +++ ILT
Sbjct: 121 SE-EEDVGEIDYGNCVSIGSDEFRSIV-TKLSAYFNHRICATLTDSQVKFSVANEEIILT 180

Query: 181 RERGEYVNINPQ-GVETRFEFSIHPTSFFNNLTDK 215
           +E G+ + I P+ GVET+FEF++HPTSFF +L DK
Sbjct: 181 KEGGQCLIIAPERGVETKFEFTLHPTSFFYDLADK 213

BLAST of Carg11114 vs. ExPASy TrEMBL
Match: A0A1S3C8J1 (uncharacterized protein LOC103498010 OS=Cucumis melo OX=3656 GN=LOC103498010 PE=4 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 2.6e-20
Identity = 63/208 (30.29%), Postives = 117/208 (56.25%), Query Frame = 0

Query: 11  PLVNAVSPLTQIATQADVDISPVSFTLTVSQYFPRFLTVLQLTPHFFASFLVTQNLNARI 70
           PL++A S L Q+A  ADV  +P+   + VS   P+F+  LQL+   F +F V  N ++++
Sbjct: 11  PLIDATSLLAQVAKDADVKFTPLMLMIIVSNRSPQFVATLQLSRRLFTNFSVDHNKSSKV 70

Query: 71  CLDSFHTTLISAHQLSAVSINLVEVSRCLLLAHENTDTELLERKMLELLPPEHNDDLGDI 130
            L  FH  ++     S+++I+L++ +  ++L  E    ++        L P   ++LG +
Sbjct: 71  SLQPFHDAMLDGGSFSSMTIHLLDTTNQMVLRFETPSHDVPPLHHELALSPPQAENLGQV 130

Query: 131 DFTNCVSIHLRDFRRIVHQELSVSYRDRVCITTSESQIKLSVGDKKTILTRERGEYVNIN 190
           ++ N  ++  R+ RRI+ +EL + ++D V +T + SQ+K S+  K+ ILT+E G    + 
Sbjct: 131 EYGNFFTVTSRELRRII-KELPLFHQDTVSVTVTGSQVKFSIQSKEIILTKEGGHCKIVG 190

Query: 191 PQG-VETRFEFSIHPTSFFNNLTDKSRR 218
            +G VET+ +  + P  FF N T ++ +
Sbjct: 191 YEGEVETKLQVVLRPMMFFLNFTYRANK 217

BLAST of Carg11114 vs. ExPASy TrEMBL
Match: A0A6J1KIW5 (uncharacterized protein LOC111494874 OS=Cucurbita maxima OX=3661 GN=LOC111494874 PE=4 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 6.3e-19
Identity = 64/203 (31.53%), Postives = 114/203 (56.16%), Query Frame = 0

Query: 11  PLVNAVSPLTQIATQADVDISPVSFTLTVSQYFPRFLTVLQLTPHFFASFLVTQNLNARI 70
           PLV+  S L QIA ++D+  +P+S  LT S+  PRF+  LQ+    F  + V  +  +RI
Sbjct: 14  PLVDGTSRLAQIARESDIIFTPLSLKLTTSRPSPRFIATLQIFHQCFTVYSVNIDHCSRI 73

Query: 71  CLDSFHTTLISAHQLSAVSINLVEVSRCLLLAHENTDTELLERKMLELLPPEHNDDLGDI 130
            L+S H  L+     SA++I+L+E +  ++L  E  + E   R    LLPP+    + +I
Sbjct: 74  SLESLHDALLDCGSSSAMTIHLLENTNLMVLRFETPNHEPQLRHDFVLLPPQ-EQSIEEI 133

Query: 131 DFTNCVSIHLRDFRRIVHQELSVSYRDRVCITTSESQIKLSVGDKKTILTRERGEYVNIN 190
           +++  +++  RD R+++ +EL + + D VC+T + S+++ S+  ++ I  +E+G    + 
Sbjct: 134 EYSKSLALDSRDLRQVI-KELPLFHGDSVCVTVTSSRVRFSIASRELIFKKEKGRCEILG 193

Query: 191 PQG-VETRFEFSIHPTSFFNNLT 213
             G   T F   ++P  FF NLT
Sbjct: 194 HDGDAVTEFRIVLYPMLFFLNLT 214

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAG7026022.13.9e-116100.00hypothetical protein SDJN02_12520, partial [Cucurbita argyrosperma subsp. argyro... [more]
XP_022999836.13.9e-7998.08uncharacterized protein LOC111494189 [Cucurbita maxima][more]
XP_022964069.15.0e-7999.36uncharacterized protein LOC111464206 [Cucurbita moschata][more]
XP_023514482.11.9e-7898.09uncharacterized protein LOC111778741 [Cucurbita pepo subsp. pepo][more]
XP_022145570.12.5e-3845.58uncharacterized protein LOC111014988 [Momordica charantia][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1KE781.9e-7998.08uncharacterized protein LOC111494189 OS=Cucurbita maxima OX=3661 GN=LOC111494189... [more]
A0A6J1HM202.4e-7999.36uncharacterized protein LOC111464206 OS=Cucurbita moschata OX=3662 GN=LOC1114642... [more]
A0A6J1CUU81.2e-3845.58uncharacterized protein LOC111014988 OS=Momordica charantia OX=3673 GN=LOC111014... [more]
A0A1S3C8J12.6e-2030.29uncharacterized protein LOC103498010 OS=Cucumis melo OX=3656 GN=LOC103498010 PE=... [more]
A0A6J1KIW56.3e-1931.53uncharacterized protein LOC111494874 OS=Cucurbita maxima OX=3661 GN=LOC111494874... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.70.10.10coord: 9..220
e-value: 7.0E-13
score: 50.6

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg11114-RACarg11114-RAmRNA