Carg11101 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg11101
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	TCP family transcription factor
Location	Carg_Chr08: 5492001 .. 5493026 (+)
RNA-Seq Expression	Carg11101
Synteny	Carg11101

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCGATATTCAGAAGCAGGAATACAACGACGACGACGACGAAGACTCTCCGGTTACCGATCTCCGGATGAATGATTCCGACTCCTCTCGAATGGACCTTCTTGCCCTTGCTCCCAAGCAGGAGGATCCCGACGACTCCCATGATTCCGACCCCCCGCCATCCCAAATTCAGGTCGTTAACTTCGCGCCGGAGATTGCTAAAACCGTCTCCGTTCTCCCGCCTAAGAGAGCCTCCACCAAGGATCGCCATACTAAGGTCGAGGGCCGCGGCAGGAGGATTCGGATTCCGGCTACCTGTGCGGCGCGTATCTTCCAGTTGACTCGAGAGCTTGGCCACAAGTCTGACGGCGAAACCATACGGTGGCTTCTCGAACGGGCTGAGCCGGCGATCATCGCTGCTACTGGAACTGGTACCATTCCCGCCATCGCTATGTCTGTTAATGGCACTCTCAAAATTCCCACCACCACTTCTTCTAATCAAGATTCTGCCGACCAATCCGCTGGTAAGAAGCGGCGTAAACGTCCTGCTAATAGTGATTACGTCGACGTAAACGATGCCGTTTCCGTCTCAGTCTCCAACGGCGTCGTTCATTCAGGTAGCAGTACCACCGCGGCCGTGCAACAGGCTTTACCGCCAGGGTTCGTTCCGGTGTGGGCCATCCCATCGAACGCTATAATTCCCGGGGCGGTTTTCATGGTTCCATCCGTGGCTTGCTCTTCCACCCGTCCTCAGTTGTTTTCATTTCCTGCTCCGGGGGCGCCGCTCGTCAATACGACGGCGCGGCCCATTTCCACCGTCGTATCGAAGGCGGACACATCACACATTCAATCCAGCACCACGAATCAAAGCTCGAGCAGTTCTAGCGCTTCCACCTCGAAGTCAGAATCCGTGATGGCACCGATCTCGAGCTCCACCGTTCCGACGAGCAGCAAAACGACGACGCGGATGCTTAGAGACTTCTCGTTGGAGATATACGATAAGAAAGAGCTTCAATTCATGTCTCGCTCAGCTTCAAAACATTGA

mRNA sequence

ATGGCCGATATTCAGAAGCAGGAATACAACGACGACGACGACGAAGACTCTCCGGTTACCGATCTCCGGATGAATGATTCCGACTCCTCTCGAATGGACCTTCTTGCCCTTGCTCCCAAGCAGGAGGATCCCGACGACTCCCATGATTCCGACCCCCCGCCATCCCAAATTCAGGTCGTTAACTTCGCGCCGGAGATTGCTAAAACCGTCTCCGTTCTCCCGCCTAAGAGAGCCTCCACCAAGGATCGCCATACTAAGGTCGAGGGCCGCGGCAGGAGGATTCGGATTCCGGCTACCTGTGCGGCGCGTATCTTCCAGTTGACTCGAGAGCTTGGCCACAAGTCTGACGGCGAAACCATACGGTGGCTTCTCGAACGGGCTGAGCCGGCGATCATCGCTGCTACTGGAACTGGTACCATTCCCGCCATCGCTATGTCTGTTAATGGCACTCTCAAAATTCCCACCACCACTTCTTCTAATCAAGATTCTGCCGACCAATCCGCTGGTAAGAAGCGGCGTAAACGTCCTGCTAATAGTGATTACGTCGACGTAAACGATGCCGTTTCCGTCTCAGTCTCCAACGGCGTCGTTCATTCAGGTAGCAGTACCACCGCGGCCGTGCAACAGGCTTTACCGCCAGGGTTCGTTCCGGTGTGGGCCATCCCATCGAACGCTATAATTCCCGGGGCGGTTTTCATGGTTCCATCCGTGGCTTGCTCTTCCACCCGTCCTCAGTTGTTTTCATTTCCTGCTCCGGGGGCGCCGCTCGTCAATACGACGGCGCGGCCCATTTCCACCGTCGTATCGAAGGCGGACACATCACACATTCAATCCAGCACCACGAATCAAAGCTCGAGCAGTTCTAGCGCTTCCACCTCGAAGTCAGAATCCGTGATGGCACCGATCTCGAGCTCCACCGTTCCGACGAGCAGCAAAACGACGACGCGGATGCTTAGAGACTTCTCGTTGGAGATATACGATAAGAAAGAGCTTCAATTCATGTCTCGCTCAGCTTCAAAACATTGA

Coding sequence (CDS)

ATGGCCGATATTCAGAAGCAGGAATACAACGACGACGACGACGAAGACTCTCCGGTTACCGATCTCCGGATGAATGATTCCGACTCCTCTCGAATGGACCTTCTTGCCCTTGCTCCCAAGCAGGAGGATCCCGACGACTCCCATGATTCCGACCCCCCGCCATCCCAAATTCAGGTCGTTAACTTCGCGCCGGAGATTGCTAAAACCGTCTCCGTTCTCCCGCCTAAGAGAGCCTCCACCAAGGATCGCCATACTAAGGTCGAGGGCCGCGGCAGGAGGATTCGGATTCCGGCTACCTGTGCGGCGCGTATCTTCCAGTTGACTCGAGAGCTTGGCCACAAGTCTGACGGCGAAACCATACGGTGGCTTCTCGAACGGGCTGAGCCGGCGATCATCGCTGCTACTGGAACTGGTACCATTCCCGCCATCGCTATGTCTGTTAATGGCACTCTCAAAATTCCCACCACCACTTCTTCTAATCAAGATTCTGCCGACCAATCCGCTGGTAAGAAGCGGCGTAAACGTCCTGCTAATAGTGATTACGTCGACGTAAACGATGCCGTTTCCGTCTCAGTCTCCAACGGCGTCGTTCATTCAGGTAGCAGTACCACCGCGGCCGTGCAACAGGCTTTACCGCCAGGGTTCGTTCCGGTGTGGGCCATCCCATCGAACGCTATAATTCCCGGGGCGGTTTTCATGGTTCCATCCGTGGCTTGCTCTTCCACCCGTCCTCAGTTGTTTTCATTTCCTGCTCCGGGGGCGCCGCTCGTCAATACGACGGCGCGGCCCATTTCCACCGTCGTATCGAAGGCGGACACATCACACATTCAATCCAGCACCACGAATCAAAGCTCGAGCAGTTCTAGCGCTTCCACCTCGAAGTCAGAATCCGTGATGGCACCGATCTCGAGCTCCACCGTTCCGACGAGCAGCAAAACGACGACGCGGATGCTTAGAGACTTCTCGTTGGAGATATACGATAAGAAAGAGCTTCAATTCATGTCTCGCTCAGCTTCAAAACATTGA

Protein sequence

MADIQKQEYNDDDDEDSPVTDLRMNDSDSSRMDLLALAPKQEDPDDSHDSDPPPSQIQVVNFAPEIAKTVSVLPPKRASTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSNQDSADQSAGKKRRKRPANSDYVDVNDAVSVSVSNGVVHSGSSTTAAVQQALPPGFVPVWAIPSNAIIPGAVFMVPSVACSSTRPQLFSFPAPGAPLVNTTARPISTVVSKADTSHIQSSTTNQSSSSSSASTSKSESVMAPISSSTVPTSSKTTTRMLRDFSLEIYDKKELQFMSRSASKH

Homology

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BLAST of Carg11101 vs. NCBI nr
Match: KAG7026035.1 (Transcription factor TCP9, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 625.5 bits (1612), Expect = 2.6e-175
Identity = 341/341 (100.00%), Postives = 341/341 (100.00%), Query Frame = 0


Query: 1   MADIQKQEYNDDDDEDSPVTDLRMNDSDSSRMDLLALAPKQEDPDDSHDSDPPPSQIQVV 60
           MADIQKQEYNDDDDEDSPVTDLRMNDSDSSRMDLLALAPKQEDPDDSHDSDPPPSQIQVV
Sbjct: 1   MADIQKQEYNDDDDEDSPVTDLRMNDSDSSRMDLLALAPKQEDPDDSHDSDPPPSQIQVV 60

Query: 61  NFAPEIAKTVSVLPPKRASTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETI 120
           NFAPEIAKTVSVLPPKRASTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETI
Sbjct: 61  NFAPEIAKTVSVLPPKRASTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETI 120

Query: 121 RWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSNQDSADQSAGKKRRKRPANSD 180
           RWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSNQDSADQSAGKKRRKRPANSD
Sbjct: 121 RWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSNQDSADQSAGKKRRKRPANSD 180

Query: 181 YVDVNDAVSVSVSNGVVHSGSSTTAAVQQALPPGFVPVWAIPSNAIIPGAVFMVPSVACS 240
           YVDVNDAVSVSVSNGVVHSGSSTTAAVQQALPPGFVPVWAIPSNAIIPGAVFMVPSVACS
Sbjct: 181 YVDVNDAVSVSVSNGVVHSGSSTTAAVQQALPPGFVPVWAIPSNAIIPGAVFMVPSVACS 240

Query: 241 STRPQLFSFPAPGAPLVNTTARPISTVVSKADTSHIQSSTTNQSSSSSSASTSKSESVMA 300
           STRPQLFSFPAPGAPLVNTTARPISTVVSKADTSHIQSSTTNQSSSSSSASTSKSESVMA
Sbjct: 241 STRPQLFSFPAPGAPLVNTTARPISTVVSKADTSHIQSSTTNQSSSSSSASTSKSESVMA 300

Query: 301 PISSSTVPTSSKTTTRMLRDFSLEIYDKKELQFMSRSASKH 342
           PISSSTVPTSSKTTTRMLRDFSLEIYDKKELQFMSRSASKH
Sbjct: 301 PISSSTVPTSSKTTTRMLRDFSLEIYDKKELQFMSRSASKH 341

[Close]

BLAST of Carg11101 vs. NCBI nr
Match: XP_022964565.1 (transcription factor TCP9 [Cucurbita moschata])

HSP 1 Score: 624.4 bits (1609), Expect = 5.8e-175
Identity = 340/341 (99.71%), Postives = 341/341 (100.00%), Query Frame = 0


Query: 1   MADIQKQEYNDDDDEDSPVTDLRMNDSDSSRMDLLALAPKQEDPDDSHDSDPPPSQIQVV 60
           MADIQKQEYNDDDDEDSPVTDLRMNDSDSSRMDLLALAPKQEDPDDSHDSDPPPSQIQVV
Sbjct: 1   MADIQKQEYNDDDDEDSPVTDLRMNDSDSSRMDLLALAPKQEDPDDSHDSDPPPSQIQVV 60

Query: 61  NFAPEIAKTVSVLPPKRASTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETI 120
           NFAPEIAKTVSVLPPKRASTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETI
Sbjct: 61  NFAPEIAKTVSVLPPKRASTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETI 120

Query: 121 RWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSNQDSADQSAGKKRRKRPANSD 180
           RWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSNQDSADQSAGKKRRKRPANSD
Sbjct: 121 RWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSNQDSADQSAGKKRRKRPANSD 180

Query: 181 YVDVNDAVSVSVSNGVVHSGSSTTAAVQQALPPGFVPVWAIPSNAIIPGAVFMVPSVACS 240
           YVDVNDAVSVSVSNGVVHSG+STTAAVQQALPPGFVPVWAIPSNAIIPGAVFMVPSVACS
Sbjct: 181 YVDVNDAVSVSVSNGVVHSGTSTTAAVQQALPPGFVPVWAIPSNAIIPGAVFMVPSVACS 240

Query: 241 STRPQLFSFPAPGAPLVNTTARPISTVVSKADTSHIQSSTTNQSSSSSSASTSKSESVMA 300
           STRPQLFSFPAPGAPLVNTTARPISTVVSKADTSHIQSSTTNQSSSSSSASTSKSESVMA
Sbjct: 241 STRPQLFSFPAPGAPLVNTTARPISTVVSKADTSHIQSSTTNQSSSSSSASTSKSESVMA 300

Query: 301 PISSSTVPTSSKTTTRMLRDFSLEIYDKKELQFMSRSASKH 342
           PISSSTVPTSSKTTTRMLRDFSLEIYDKKELQFMSRSASKH
Sbjct: 301 PISSSTVPTSSKTTTRMLRDFSLEIYDKKELQFMSRSASKH 341

[Close]

BLAST of Carg11101 vs. NCBI nr
Match: KAG6593695.1 (Transcription factor TCP9, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 624.4 bits (1609), Expect = 5.8e-175
Identity = 340/341 (99.71%), Postives = 341/341 (100.00%), Query Frame = 0


Query: 1   MADIQKQEYNDDDDEDSPVTDLRMNDSDSSRMDLLALAPKQEDPDDSHDSDPPPSQIQVV 60
           MADIQKQEYNDDDDEDSPVTDLRMNDSDSSRMDLLALAPKQEDPDDSHDSDPPPSQIQVV
Sbjct: 1   MADIQKQEYNDDDDEDSPVTDLRMNDSDSSRMDLLALAPKQEDPDDSHDSDPPPSQIQVV 60

Query: 61  NFAPEIAKTVSVLPPKRASTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETI 120
           NFAPEIAKTVSVLPPKRASTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETI
Sbjct: 61  NFAPEIAKTVSVLPPKRASTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETI 120

Query: 121 RWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSNQDSADQSAGKKRRKRPANSD 180
           RWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSNQDSADQSAGKKRRKRPANSD
Sbjct: 121 RWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSNQDSADQSAGKKRRKRPANSD 180

Query: 181 YVDVNDAVSVSVSNGVVHSGSSTTAAVQQALPPGFVPVWAIPSNAIIPGAVFMVPSVACS 240
           YVDVNDAVSVSVSNGV+HSGSSTTAAVQQALPPGFVPVWAIPSNAIIPGAVFMVPSVACS
Sbjct: 181 YVDVNDAVSVSVSNGVLHSGSSTTAAVQQALPPGFVPVWAIPSNAIIPGAVFMVPSVACS 240

Query: 241 STRPQLFSFPAPGAPLVNTTARPISTVVSKADTSHIQSSTTNQSSSSSSASTSKSESVMA 300
           STRPQLFSFPAPGAPLVNTTARPISTVVSKADTSHIQSSTTNQSSSSSSASTSKSESVMA
Sbjct: 241 STRPQLFSFPAPGAPLVNTTARPISTVVSKADTSHIQSSTTNQSSSSSSASTSKSESVMA 300

Query: 301 PISSSTVPTSSKTTTRMLRDFSLEIYDKKELQFMSRSASKH 342
           PISSSTVPTSSKTTTRMLRDFSLEIYDKKELQFMSRSASKH
Sbjct: 301 PISSSTVPTSSKTTTRMLRDFSLEIYDKKELQFMSRSASKH 341

[Close]

BLAST of Carg11101 vs. NCBI nr
Match: XP_023515272.1 (transcription factor TCP9 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 619.0 bits (1595), Expect = 2.4e-173
Identity = 338/341 (99.12%), Postives = 339/341 (99.41%), Query Frame = 0


Query: 1   MADIQKQEYNDDDDEDSPVTDLRMNDSDSSRMDLLALAPKQEDPDDSHDSDPPPSQIQVV 60
           MADIQKQEYNDDDDEDSPVTDLRMNDSDSSRMDLLALAPKQEDPDDSHDSD PPSQIQVV
Sbjct: 1   MADIQKQEYNDDDDEDSPVTDLRMNDSDSSRMDLLALAPKQEDPDDSHDSDLPPSQIQVV 60

Query: 61  NFAPEIAKTVSVLPPKRASTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETI 120
           NFAPEIAKTVSVLPPKRASTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETI
Sbjct: 61  NFAPEIAKTVSVLPPKRASTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETI 120

Query: 121 RWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSNQDSADQSAGKKRRKRPANSD 180
           RWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSNQDSADQS GKKRRKRPANSD
Sbjct: 121 RWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSNQDSADQSVGKKRRKRPANSD 180

Query: 181 YVDVNDAVSVSVSNGVVHSGSSTTAAVQQALPPGFVPVWAIPSNAIIPGAVFMVPSVACS 240
           YVDVNDAVSVSVSNGVVHSG+STTAAVQQALPPGFVPVWAIPSNAIIPGAVFMVPSVACS
Sbjct: 181 YVDVNDAVSVSVSNGVVHSGTSTTAAVQQALPPGFVPVWAIPSNAIIPGAVFMVPSVACS 240

Query: 241 STRPQLFSFPAPGAPLVNTTARPISTVVSKADTSHIQSSTTNQSSSSSSASTSKSESVMA 300
           STRPQLFSFPAPGAPLVNTTARPISTVVSKADTSHIQSSTTNQSSSSSSASTSKSESVMA
Sbjct: 241 STRPQLFSFPAPGAPLVNTTARPISTVVSKADTSHIQSSTTNQSSSSSSASTSKSESVMA 300

Query: 301 PISSSTVPTSSKTTTRMLRDFSLEIYDKKELQFMSRSASKH 342
           PISSSTVPTSSKTTTRMLRDFSLEIYDKKELQFMSRSASKH
Sbjct: 301 PISSSTVPTSSKTTTRMLRDFSLEIYDKKELQFMSRSASKH 341

[Close]

BLAST of Carg11101 vs. NCBI nr
Match: XP_022999831.1 (transcription factor TCP9 [Cucurbita maxima])

HSP 1 Score: 616.3 bits (1588), Expect = 1.6e-172
Identity = 337/341 (98.83%), Postives = 338/341 (99.12%), Query Frame = 0


Query: 1   MADIQKQEYNDDDDEDSPVTDLRMNDSDSSRMDLLALAPKQEDPDDSHDSDPPPSQIQVV 60
           MADIQKQEYNDDDDEDSPVTDLRMNDSDSSRMDLLALAPKQEDPDDSHDSD PPSQIQVV
Sbjct: 1   MADIQKQEYNDDDDEDSPVTDLRMNDSDSSRMDLLALAPKQEDPDDSHDSDLPPSQIQVV 60

Query: 61  NFAPEIAKTVSVLPPKRASTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETI 120
           NFAPEIAKTVSVLPPKRASTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETI
Sbjct: 61  NFAPEIAKTVSVLPPKRASTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETI 120

Query: 121 RWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSNQDSADQSAGKKRRKRPANSD 180
           RWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSNQDSADQSAGKKRRKRPANSD
Sbjct: 121 RWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSNQDSADQSAGKKRRKRPANSD 180

Query: 181 YVDVNDAVSVSVSNGVVHSGSSTTAAVQQALPPGFVPVWAIPSNAIIPGAVFMVPSVACS 240
           YVDVNDAVSVSVSNGVVHSG+STTAAVQQALPPGFVPVWAIPSNAIIPGAVFMVPSVACS
Sbjct: 181 YVDVNDAVSVSVSNGVVHSGTSTTAAVQQALPPGFVPVWAIPSNAIIPGAVFMVPSVACS 240

Query: 241 STRPQLFSFPAPGAPLVNTTARPISTVVSKADTSHIQSSTTNQSSSSSSASTSKSESVMA 300
           STRPQLFSFPAPG PLVNTTARPISTVVSKADTSHIQSSTTNQSSSSSSA TSKSESVMA
Sbjct: 241 STRPQLFSFPAPGPPLVNTTARPISTVVSKADTSHIQSSTTNQSSSSSSAFTSKSESVMA 300

Query: 301 PISSSTVPTSSKTTTRMLRDFSLEIYDKKELQFMSRSASKH 342
           PISSSTVPTSSKTTTRMLRDFSLEIYDKKELQFMSRSASKH
Sbjct: 301 PISSSTVPTSSKTTTRMLRDFSLEIYDKKELQFMSRSASKH 341

[Close]

BLAST of Carg11101 vs. ExPASy Swiss-Prot
Match: O64647 (Transcription factor TCP9 OS=Arabidopsis thaliana OX=3702 GN=TCP9 PE=1 SV=1)

HSP 1 Score: 253.8 bits (647), Expect = 2.7e-66
Identity = 185/365 (50.68%), Postives = 235/365 (64.38%), Query Frame = 0


Query: 1   MADIQKQEYNDDDDEDSPVTDLR----MNDSDSSRMDLLALAPKQEDPDDSHDSDPPPSQ 60
           MA IQK E     D+     DL     + + ++SR       P Q +P  S +   P ++
Sbjct: 1   MATIQKLEEVAGKDQTLRAVDLTIINGVRNVETSR-------PFQVNPTVSLE---PKAE 60

Query: 61  IQVVNFAPEIAKTVSVLPP-KRASTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKS 120
             + +F+  +A   S  PP KRASTKDRHTKVEGRGRRIR+PATCAARIFQLTRELGHKS
Sbjct: 61  PVMPSFSMSLAPPSSTGPPLKRASTKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKS 120

Query: 121 DGETIRWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSNQDSADQSAGKKRRKR 180
           DGETIRWLLE AEPAIIAATGTGT+PAIAMSVNGTLKIPTTT+++ D   ++  KK+RKR
Sbjct: 121 DGETIRWLLENAEPAIIAATGTGTVPAIAMSVNGTLKIPTTTNADSDMG-ENLMKKKRKR 180

Query: 181 PANSDYVDVNDAVSVSVSNGVVHSGSSTT----------AAVQQALPPGFVPVWAIPSNA 240
           P+NS+Y+D++DA  VS S+G+    ++TT             QQ LP G  P+WAIPSNA
Sbjct: 181 PSNSEYIDISDA--VSASSGLAPIATTTTIQPPQALASSTVAQQLLPQGMYPMWAIPSNA 240

Query: 241 IIP--GAVFMVPSVACSSTRPQLFSFPAPGAPLVNTTA--RPISTVVSKADTSHIQSSTT 300
           +IP  GA F++P +A  S +PQL +FPA  A   +  A  +  ST+        + SS  
Sbjct: 241 MIPTVGAFFLIPQIAGPSNQPQLLAFPAAAASPSSYVAAVQQASTMARPPPLQVVPSSGF 300

Query: 301 NQSSSSSSASTSKSESVMAPISSSTVPTSSK-----TTTRMLRDFSLEIYDKKEL-QFMS 341
              S  S ++ S++ SVMAP SSS V T S      TTT  LRDFSLEIY+K+EL QFMS
Sbjct: 301 VSVSDVSGSNLSRATSVMAPSSSSGVTTGSSSSIATTTTHTLRDFSLEIYEKQELHQFMS 352

[Close]

BLAST of Carg11101 vs. ExPASy Swiss-Prot
Match: Q9LT89 (Transcription factor TCP19 OS=Arabidopsis thaliana OX=3702 GN=TCP19 PE=1 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 3.9e-49
Identity = 139/302 (46.03%), Postives = 177/302 (58.61%), Query Frame = 0


Query: 47  SHDSDPPPSQ---IQVVNFAPEIAKTVSVLP-PKRASTKDRHTKVEGRGRRIRIPATCAA 106
           +H SDP P     + ++       + V   P PKR ++KDRHTKVEGRGRRIR+PA CAA
Sbjct: 20  THLSDPNPKTKPGMMLMKQEDGYLQPVKTKPAPKRPTSKDRHTKVEGRGRRIRMPAGCAA 79

Query: 107 RIFQLTRELGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSNQD 166
           R+FQLTRELGHKSDGETIRWLLERAEPAII ATGTGT+PAIA+SVNGTLKIPT++    D
Sbjct: 80  RVFQLTRELGHKSDGETIRWLLERAEPAIIEATGTGTVPAIAVSVNGTLKIPTSSPVLND 139

Query: 167 SADQSAG---KKRRKRPANSDYVDVNDAVSVSVSNGVVH-SGSSTTAAVQQALPPGFVPV 226
                 G   KKRRKR   SD+VDVND+   SV++G+   + S+    +      GFVP 
Sbjct: 140 GGRDGDGDLIKKRRKRNCTSDFVDVNDSCHSSVTSGLAPITASNYGVNILNVNTQGFVPF 199

Query: 227 WAIPSNAIIPGAVFMVPSVACSSTRPQLFSFPAPG-APLVNTTARPISTVVSKADTSHIQ 286
           W +       G  F+           Q+++ P    AP +N  ARP+S+ V         
Sbjct: 200 WPMGM-----GTAFVTGG---PDQMGQMWAIPTVATAPFLNVGARPVSSYV--------- 259

Query: 287 SSTTNQSSSSSSASTSKSESVMAPISSSTVPTSSKTTTRMLRDFSLEIYDKKELQFMSRS 340
                     S+AS +++E          + TS   TT+ LRDFSLEIYDK+ELQF+  S
Sbjct: 260 ----------SNASDAEAE----------METSGGGTTQPLRDFSLEIYDKRELQFLGGS 284

[Close]

BLAST of Carg11101 vs. ExPASy Swiss-Prot
Match: A2YXQ1 (Transcription factor PCF2 OS=Oryza sativa subsp. indica OX=39946 GN=PCF2 PE=4 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 3.3e-32
Identity = 112/255 (43.92%), Postives = 142/255 (55.69%), Query Frame = 0


Query: 74  PPKRASTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWLLERAEPAIIA 133
           PP R   +DRHTKVEGRGRRIR+PA CAARIFQLTRELGHKSDGETIRWLL+++EPAIIA
Sbjct: 71  PPPR--NRDRHTKVEGRGRRIRMPAACAARIFQLTRELGHKSDGETIRWLLQQSEPAIIA 130

Query: 134 ATGTGTIPAIAMSVNGTLKIPTTTSSNQDSA-------DQSAGKKRRK------------ 193
           ATGTGT+PAIA +V+G L+IPT +SS+   A       ++S+ K+RRK            
Sbjct: 131 ATGTGTVPAIATTVDGVLRIPTQSSSSSGPASSAVVDGEESSAKRRRKLQPTRAVAGASP 190

Query: 194 --RPANSDYVDVNDAVSVSVSNGVVHSGSSTTAAV-QQALPPGFVPVWAIPS-------- 253
               A + Y  V     +  S G   S  S  A +     P G VPV+A+P+        
Sbjct: 191 LATAAPAAYYPVIADPLLQGSGGAAISVPSGLAPITATGAPQGLVPVFAVPATGSPAVAG 250

Query: 254 -NAIIP--GAVFMVP---SVACSSTRPQLFSFPAPGAPLVNTTARPISTVVSKADTSHIQ 288
            N +IP   AV+MVP     A +  +P  F        LVN       T ++ AD    Q
Sbjct: 251 GNRMIPQATAVWMVPQPAGAAGAGNQPTQFWAIQSAPQLVNFAGAQFPTAINVADFQQQQ 310

[Close]

BLAST of Carg11101 vs. ExPASy Swiss-Prot
Match: Q6ZBH6 (Transcription factor PCF2 OS=Oryza sativa subsp. japonica OX=39947 GN=PCF2 PE=1 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 3.3e-32
Identity = 112/255 (43.92%), Postives = 142/255 (55.69%), Query Frame = 0


Query: 74  PPKRASTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWLLERAEPAIIA 133
           PP R   +DRHTKVEGRGRRIR+PA CAARIFQLTRELGHKSDGETIRWLL+++EPAIIA
Sbjct: 71  PPPR--NRDRHTKVEGRGRRIRMPAACAARIFQLTRELGHKSDGETIRWLLQQSEPAIIA 130

Query: 134 ATGTGTIPAIAMSVNGTLKIPTTTSSNQDSA-------DQSAGKKRRK------------ 193
           ATGTGT+PAIA +V+G L+IPT +SS+   A       ++S+ K+RRK            
Sbjct: 131 ATGTGTVPAIATTVDGVLRIPTQSSSSSGPASSAVVDGEESSAKRRRKLQPTRAVAGASP 190

Query: 194 --RPANSDYVDVNDAVSVSVSNGVVHSGSSTTAAV-QQALPPGFVPVWAIPS-------- 253
               A + Y  V     +  S G   S  S  A +     P G VPV+A+P+        
Sbjct: 191 LATAAPAAYYPVIADPLLQGSGGAAISVPSGLAPITATGAPQGLVPVFAVPATGSPAVAG 250

Query: 254 -NAIIP--GAVFMVP---SVACSSTRPQLFSFPAPGAPLVNTTARPISTVVSKADTSHIQ 288
            N +IP   AV+MVP     A +  +P  F        LVN       T ++ AD    Q
Sbjct: 251 GNRMIPQATAVWMVPQPAGAAGAGNQPTQFWAIQSAPQLVNFAGAQFPTAINVADFQQQQ 310

[Close]

BLAST of Carg11101 vs. ExPASy Swiss-Prot
Match: Q93Z00 (Transcription factor TCP14 OS=Arabidopsis thaliana OX=3702 GN=TCP14 PE=1 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 2.2e-28
Identity = 78/148 (52.70%), Postives = 97/148 (65.54%), Query Frame = 0


Query: 11  DDDDEDSPVTDLRMNDSDSSRMDLLALAPKQ-----EDPDDSHDSDPPPSQIQVVNFAPE 70
           DD+ +  P        S SS   L +L   Q     +    S  S P  +Q +++    E
Sbjct: 50  DDNHQQQP--------SPSSSSSLFSLHQHQQLSQSQPQSQSQKSQPQTTQKELLQTQEE 109

Query: 71  IAKTVSVLPP-KRASTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWLL 130
            A   +  PP KRASTKDRHTKV+GRGRRIR+PA CAAR+FQLTRELGHKSDGETI WLL
Sbjct: 110 SAVVAAKKPPLKRASTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLL 169

Query: 131 ERAEPAIIAATGTGTIPAIAMSVNGTLK 153
           ++AEP++IAATGTGTIPA   S+N +L+
Sbjct: 170 QQAEPSVIAATGTGTIPANFTSLNISLR 189

[Close]

BLAST of Carg11101 vs. ExPASy TrEMBL
Match: A0A6J1HL63 (transcription factor TCP9 OS=Cucurbita moschata OX=3662 GN=LOC111464552 PE=4 SV=1)

HSP 1 Score: 624.4 bits (1609), Expect = 2.8e-175
Identity = 340/341 (99.71%), Postives = 341/341 (100.00%), Query Frame = 0


Query: 1   MADIQKQEYNDDDDEDSPVTDLRMNDSDSSRMDLLALAPKQEDPDDSHDSDPPPSQIQVV 60
           MADIQKQEYNDDDDEDSPVTDLRMNDSDSSRMDLLALAPKQEDPDDSHDSDPPPSQIQVV
Sbjct: 1   MADIQKQEYNDDDDEDSPVTDLRMNDSDSSRMDLLALAPKQEDPDDSHDSDPPPSQIQVV 60

Query: 61  NFAPEIAKTVSVLPPKRASTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETI 120
           NFAPEIAKTVSVLPPKRASTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETI
Sbjct: 61  NFAPEIAKTVSVLPPKRASTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETI 120

Query: 121 RWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSNQDSADQSAGKKRRKRPANSD 180
           RWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSNQDSADQSAGKKRRKRPANSD
Sbjct: 121 RWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSNQDSADQSAGKKRRKRPANSD 180

Query: 181 YVDVNDAVSVSVSNGVVHSGSSTTAAVQQALPPGFVPVWAIPSNAIIPGAVFMVPSVACS 240
           YVDVNDAVSVSVSNGVVHSG+STTAAVQQALPPGFVPVWAIPSNAIIPGAVFMVPSVACS
Sbjct: 181 YVDVNDAVSVSVSNGVVHSGTSTTAAVQQALPPGFVPVWAIPSNAIIPGAVFMVPSVACS 240

Query: 241 STRPQLFSFPAPGAPLVNTTARPISTVVSKADTSHIQSSTTNQSSSSSSASTSKSESVMA 300
           STRPQLFSFPAPGAPLVNTTARPISTVVSKADTSHIQSSTTNQSSSSSSASTSKSESVMA
Sbjct: 241 STRPQLFSFPAPGAPLVNTTARPISTVVSKADTSHIQSSTTNQSSSSSSASTSKSESVMA 300

Query: 301 PISSSTVPTSSKTTTRMLRDFSLEIYDKKELQFMSRSASKH 342
           PISSSTVPTSSKTTTRMLRDFSLEIYDKKELQFMSRSASKH
Sbjct: 301 PISSSTVPTSSKTTTRMLRDFSLEIYDKKELQFMSRSASKH 341

[Close]

BLAST of Carg11101 vs. ExPASy TrEMBL
Match: A0A6J1KE73 (transcription factor TCP9 OS=Cucurbita maxima OX=3661 GN=LOC111494185 PE=4 SV=1)

HSP 1 Score: 616.3 bits (1588), Expect = 7.6e-173
Identity = 337/341 (98.83%), Postives = 338/341 (99.12%), Query Frame = 0


Query: 1   MADIQKQEYNDDDDEDSPVTDLRMNDSDSSRMDLLALAPKQEDPDDSHDSDPPPSQIQVV 60
           MADIQKQEYNDDDDEDSPVTDLRMNDSDSSRMDLLALAPKQEDPDDSHDSD PPSQIQVV
Sbjct: 1   MADIQKQEYNDDDDEDSPVTDLRMNDSDSSRMDLLALAPKQEDPDDSHDSDLPPSQIQVV 60

Query: 61  NFAPEIAKTVSVLPPKRASTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETI 120
           NFAPEIAKTVSVLPPKRASTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETI
Sbjct: 61  NFAPEIAKTVSVLPPKRASTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETI 120

Query: 121 RWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSNQDSADQSAGKKRRKRPANSD 180
           RWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSNQDSADQSAGKKRRKRPANSD
Sbjct: 121 RWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSNQDSADQSAGKKRRKRPANSD 180

Query: 181 YVDVNDAVSVSVSNGVVHSGSSTTAAVQQALPPGFVPVWAIPSNAIIPGAVFMVPSVACS 240
           YVDVNDAVSVSVSNGVVHSG+STTAAVQQALPPGFVPVWAIPSNAIIPGAVFMVPSVACS
Sbjct: 181 YVDVNDAVSVSVSNGVVHSGTSTTAAVQQALPPGFVPVWAIPSNAIIPGAVFMVPSVACS 240

Query: 241 STRPQLFSFPAPGAPLVNTTARPISTVVSKADTSHIQSSTTNQSSSSSSASTSKSESVMA 300
           STRPQLFSFPAPG PLVNTTARPISTVVSKADTSHIQSSTTNQSSSSSSA TSKSESVMA
Sbjct: 241 STRPQLFSFPAPGPPLVNTTARPISTVVSKADTSHIQSSTTNQSSSSSSAFTSKSESVMA 300

Query: 301 PISSSTVPTSSKTTTRMLRDFSLEIYDKKELQFMSRSASKH 342
           PISSSTVPTSSKTTTRMLRDFSLEIYDKKELQFMSRSASKH
Sbjct: 301 PISSSTVPTSSKTTTRMLRDFSLEIYDKKELQFMSRSASKH 341

[Close]

BLAST of Carg11101 vs. ExPASy TrEMBL
Match: A0A1S3CBF3 (transcription factor TCP9 OS=Cucumis melo OX=3656 GN=LOC103499048 PE=4 SV=1)

HSP 1 Score: 469.9 bits (1208), Expect = 8.8e-129
Identity = 272/342 (79.53%), Postives = 293/342 (85.67%), Query Frame = 0


Query: 1   MADIQKQEYNDDDDEDSPVTDLRMNDSDSSRMDLLALAPKQEDPDDSHDSDPPPSQIQVV 60
           MAD QKQE   DDD+DSP T LR+NDSDSSRMDLL L PKQE PD +   D       ++
Sbjct: 1   MADNQKQEL--DDDDDSPPTHLRINDSDSSRMDLLPLTPKQEHPDSNLPHD-------LL 60

Query: 61  NFAPEIAKTVSVLPPKRASTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETI 120
            F P+I KT+S LPPKR STKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETI
Sbjct: 61  TFNPDIPKTLSSLPPKRPSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETI 120

Query: 121 RWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTT-SSNQDSADQSAGKKRRKRPANS 180
           RWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTT SSNQDSAD SA KKRRKRPANS
Sbjct: 121 RWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSSNQDSADPSAVKKRRKRPANS 180

Query: 181 DYVDVNDAVSVSVSNGVVHSGSSTTAAVQQALPPGFVPVWAIPSNAIIPGAVFMVPSVAC 240
           DYVDVNDA+SVS+S     S  + + AVQQA PPGFVPVWAIPSNAIIPGAVFMVPSVAC
Sbjct: 181 DYVDVNDALSVSIS----ASNVAGSPAVQQAFPPGFVPVWAIPSNAIIPGAVFMVPSVAC 240

Query: 241 SSTRPQLFSFPAPGAPLVNTTARPISTVVSKADTSHIQSSTTNQSSSSSSASTSKSESVM 300
           SSTRPQLFSF AP AP++NTTARPIS   SK DTSHIQSS TNQSSS+SS+S SKS+SVM
Sbjct: 241 SSTRPQLFSFSAPAAPVINTTARPISAFPSKPDTSHIQSSPTNQSSSTSSSSASKSQSVM 300

Query: 301 APISSSTVPTSSKTTTRMLRDFSLEIYDKKELQFMSRSASKH 342
           APISSS+V  S KTTT+MLRDFSLEIYDK+ELQFM+RS+SKH
Sbjct: 301 APISSSSVQRSGKTTTQMLRDFSLEIYDKEELQFMTRSSSKH 329

[Close]

BLAST of Carg11101 vs. ExPASy TrEMBL
Match: A0A6J1L1L3 (transcription factor TCP9-like OS=Cucurbita maxima OX=3661 GN=LOC111499026 PE=4 SV=1)

HSP 1 Score: 464.5 bits (1194), Expect = 3.7e-127
Identity = 268/353 (75.92%), Postives = 297/353 (84.14%), Query Frame = 0


Query: 1   MADIQKQEYNDDDDED---SPVTDLRMNDSDSSRMDLLALAPKQEDPDDSHDSDPPPSQI 60
           MADI KQE +DD+D+D   SP T L +N+SDSS M+LL LAPK+E PD+ H++       
Sbjct: 74  MADIHKQELDDDEDDDHHHSPPTHLCINNSDSSPMNLLPLAPKREHPDNDHET------- 133

Query: 61  QVVNFAPEIAKTVSVLPPKRASTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDG 120
           QV+ F  EI KTVS +PPKR STKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDG
Sbjct: 134 QVLKFTAEIPKTVSSIPPKRPSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDG 193

Query: 121 ETIRWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTT-SSNQDSADQSAGKKRRKRP 180
           ETIRWLLERAEPAIIAATGTGT+PAIAMSVNGTLKIPTTT SSNQDS DQSA KKRRKRP
Sbjct: 194 ETIRWLLERAEPAIIAATGTGTVPAIAMSVNGTLKIPTTTSSSNQDSTDQSASKKRRKRP 253

Query: 181 ANSDYVDVNDAVSVSVS--------NGVVHSGS-STTAAVQQALPPGFVPVWAIPSNAII 240
            NSDYVDVNDAVSVSVS        NG V + + + + AVQQ  PPGFVPVWAIPSNAII
Sbjct: 254 TNSDYVDVNDAVSVSVSVSASASAPNGAVQAATVAGSPAVQQPFPPGFVPVWAIPSNAII 313

Query: 241 PGAVFMVPSVACSSTRPQLFSFPAPGAPLVNTTARPISTVVSKADTSHIQSSTTNQSSSS 300
           PGAVFMVPSV CSSTRPQ FSFP P APL+NTTARPISTV SK  TSHIQ++TTNQSSS+
Sbjct: 314 PGAVFMVPSVDCSSTRPQFFSFPTPAAPLINTTARPISTVPSKLHTSHIQANTTNQSSST 373

Query: 301 SSASTSKSESVMAPISSSTVPTSSKTTTRMLRDFSLEIYDKKELQFMSRSASK 341
           S++S SKSESVMAPISSSTVPT+ KTT +MLR+FSLEIYDK+ELQFMSRS+ +
Sbjct: 374 SNSSASKSESVMAPISSSTVPTNDKTTKQMLREFSLEIYDKEELQFMSRSSER 419

[Close]

BLAST of Carg11101 vs. ExPASy TrEMBL
Match: A0A0A0KCU1 (TCP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G075180 PE=4 SV=1)

HSP 1 Score: 464.2 bits (1193), Expect = 4.9e-127
Identity = 274/342 (80.12%), Postives = 292/342 (85.38%), Query Frame = 0


Query: 1   MADIQKQEYNDDDDEDSPVTDLRMNDSDSSRMDLLALAPKQEDPDDSHDSDPPPSQIQVV 60
           MAD QKQE   DDD+DSP T LR+NDSDSSRMDLL L PKQE PD +   D       ++
Sbjct: 1   MADNQKQEL--DDDDDSPPTHLRINDSDSSRMDLLPLTPKQEHPDSNLPHD-------LL 60

Query: 61  NFAPEIAKTVSVLPPKRASTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETI 120
            F P+I KT+S LPPKR STKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETI
Sbjct: 61  TFNPDIPKTLSSLPPKRPSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETI 120

Query: 121 RWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTT-SSNQDSADQSAGKKRRKRPANS 180
           RWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTT SSNQDSAD SA KKRRKRPANS
Sbjct: 121 RWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSSNQDSADPSAVKKRRKRPANS 180

Query: 181 DYVDVNDAVSVSVSNGVVHSGSSTTAAVQQALPPGFVPVWAIPSNAIIPGAVFMVPSVAC 240
           DYVDVNDA+SVS+S   V +GSS   AVQQA PPGFVPVWAIPSNAIIPGAVFMVPSVAC
Sbjct: 181 DYVDVNDALSVSISASNV-AGSS---AVQQAFPPGFVPVWAIPSNAIIPGAVFMVPSVAC 240

Query: 241 SSTRPQLFSFPAPGAPLVNTTARPISTVVSKADTSHIQSSTTNQSSSSSSASTSKSESVM 300
           SSTRPQLFSF  P APL+NTTARPIS   SKA+TSHIQSS TNQSSS+SS+S SKS+SVM
Sbjct: 241 SSTRPQLFSFSTPAAPLINTTARPISAFPSKAETSHIQSSPTNQSSSTSSSSASKSQSVM 300

Query: 301 APISSSTVPTSSKTTTRMLRDFSLEIYDKKELQFMSRSASKH 342
           APISSS    S KTTT+MLRDFSLEIYDK+ELQFMS S+SKH
Sbjct: 301 APISSS----SGKTTTQMLRDFSLEIYDKEELQFMSSSSSKH 325

[Close]

BLAST of Carg11101 vs. TAIR 10
Match: AT2G45680.1 (TCP family transcription factor )

HSP 1 Score: 253.8 bits (647), Expect = 1.9e-67
Identity = 185/365 (50.68%), Postives = 235/365 (64.38%), Query Frame = 0


Query: 1   MADIQKQEYNDDDDEDSPVTDLR----MNDSDSSRMDLLALAPKQEDPDDSHDSDPPPSQ 60
           MA IQK E     D+     DL     + + ++SR       P Q +P  S +   P ++
Sbjct: 1   MATIQKLEEVAGKDQTLRAVDLTIINGVRNVETSR-------PFQVNPTVSLE---PKAE 60

Query: 61  IQVVNFAPEIAKTVSVLPP-KRASTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKS 120
             + +F+  +A   S  PP KRASTKDRHTKVEGRGRRIR+PATCAARIFQLTRELGHKS
Sbjct: 61  PVMPSFSMSLAPPSSTGPPLKRASTKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKS 120

Query: 121 DGETIRWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSNQDSADQSAGKKRRKR 180
           DGETIRWLLE AEPAIIAATGTGT+PAIAMSVNGTLKIPTTT+++ D   ++  KK+RKR
Sbjct: 121 DGETIRWLLENAEPAIIAATGTGTVPAIAMSVNGTLKIPTTTNADSDMG-ENLMKKKRKR 180

Query: 181 PANSDYVDVNDAVSVSVSNGVVHSGSSTT----------AAVQQALPPGFVPVWAIPSNA 240
           P+NS+Y+D++DA  VS S+G+    ++TT             QQ LP G  P+WAIPSNA
Sbjct: 181 PSNSEYIDISDA--VSASSGLAPIATTTTIQPPQALASSTVAQQLLPQGMYPMWAIPSNA 240

Query: 241 IIP--GAVFMVPSVACSSTRPQLFSFPAPGAPLVNTTA--RPISTVVSKADTSHIQSSTT 300
           +IP  GA F++P +A  S +PQL +FPA  A   +  A  +  ST+        + SS  
Sbjct: 241 MIPTVGAFFLIPQIAGPSNQPQLLAFPAAAASPSSYVAAVQQASTMARPPPLQVVPSSGF 300

Query: 301 NQSSSSSSASTSKSESVMAPISSSTVPTSSK-----TTTRMLRDFSLEIYDKKEL-QFMS 341
              S  S ++ S++ SVMAP SSS V T S      TTT  LRDFSLEIY+K+EL QFMS
Sbjct: 301 VSVSDVSGSNLSRATSVMAPSSSSGVTTGSSSSIATTTTHTLRDFSLEIYEKQELHQFMS 352

[Close]

BLAST of Carg11101 vs. TAIR 10
Match: AT5G51910.1 (TCP family transcription factor )

HSP 1 Score: 196.8 bits (499), Expect = 2.8e-50
Identity = 139/302 (46.03%), Postives = 177/302 (58.61%), Query Frame = 0


Query: 47  SHDSDPPPSQ---IQVVNFAPEIAKTVSVLP-PKRASTKDRHTKVEGRGRRIRIPATCAA 106
           +H SDP P     + ++       + V   P PKR ++KDRHTKVEGRGRRIR+PA CAA
Sbjct: 20  THLSDPNPKTKPGMMLMKQEDGYLQPVKTKPAPKRPTSKDRHTKVEGRGRRIRMPAGCAA 79

Query: 107 RIFQLTRELGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSNQD 166
           R+FQLTRELGHKSDGETIRWLLERAEPAII ATGTGT+PAIA+SVNGTLKIPT++    D
Sbjct: 80  RVFQLTRELGHKSDGETIRWLLERAEPAIIEATGTGTVPAIAVSVNGTLKIPTSSPVLND 139

Query: 167 SADQSAG---KKRRKRPANSDYVDVNDAVSVSVSNGVVH-SGSSTTAAVQQALPPGFVPV 226
                 G   KKRRKR   SD+VDVND+   SV++G+   + S+    +      GFVP 
Sbjct: 140 GGRDGDGDLIKKRRKRNCTSDFVDVNDSCHSSVTSGLAPITASNYGVNILNVNTQGFVPF 199

Query: 227 WAIPSNAIIPGAVFMVPSVACSSTRPQLFSFPAPG-APLVNTTARPISTVVSKADTSHIQ 286
           W +       G  F+           Q+++ P    AP +N  ARP+S+ V         
Sbjct: 200 WPMGM-----GTAFVTGG---PDQMGQMWAIPTVATAPFLNVGARPVSSYV--------- 259

Query: 287 SSTTNQSSSSSSASTSKSESVMAPISSSTVPTSSKTTTRMLRDFSLEIYDKKELQFMSRS 340
                     S+AS +++E          + TS   TT+ LRDFSLEIYDK+ELQF+  S
Sbjct: 260 ----------SNASDAEAE----------METSGGGTTQPLRDFSLEIYDKRELQFLGGS 284

[Close]

BLAST of Carg11101 vs. TAIR 10
Match: AT5G51910.2 (TCP family transcription factor )

HSP 1 Score: 196.8 bits (499), Expect = 2.8e-50
Identity = 139/302 (46.03%), Postives = 177/302 (58.61%), Query Frame = 0


Query: 47  SHDSDPPPSQ---IQVVNFAPEIAKTVSVLP-PKRASTKDRHTKVEGRGRRIRIPATCAA 106
           +H SDP P     + ++       + V   P PKR ++KDRHTKVEGRGRRIR+PA CAA
Sbjct: 20  THLSDPNPKTKPGMMLMKQEDGYLQPVKTKPAPKRPTSKDRHTKVEGRGRRIRMPAGCAA 79

Query: 107 RIFQLTRELGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSNQD 166
           R+FQLTRELGHKSDGETIRWLLERAEPAII ATGTGT+PAIA+SVNGTLKIPT++    D
Sbjct: 80  RVFQLTRELGHKSDGETIRWLLERAEPAIIEATGTGTVPAIAVSVNGTLKIPTSSPVLND 139

Query: 167 SADQSAG---KKRRKRPANSDYVDVNDAVSVSVSNGVVH-SGSSTTAAVQQALPPGFVPV 226
                 G   KKRRKR   SD+VDVND+   SV++G+   + S+    +      GFVP 
Sbjct: 140 GGRDGDGDLIKKRRKRNCTSDFVDVNDSCHSSVTSGLAPITASNYGVNILNVNTQGFVPF 199

Query: 227 WAIPSNAIIPGAVFMVPSVACSSTRPQLFSFPAPG-APLVNTTARPISTVVSKADTSHIQ 286
           W +       G  F+           Q+++ P    AP +N  ARP+S+ V         
Sbjct: 200 WPMGM-----GTAFVTGG---PDQMGQMWAIPTVATAPFLNVGARPVSSYV--------- 259

Query: 287 SSTTNQSSSSSSASTSKSESVMAPISSSTVPTSSKTTTRMLRDFSLEIYDKKELQFMSRS 340
                     S+AS +++E          + TS   TT+ LRDFSLEIYDK+ELQF+  S
Sbjct: 260 ----------SNASDAEAE----------METSGGGTTQPLRDFSLEIYDKRELQFLGGS 284

[Close]

BLAST of Carg11101 vs. TAIR 10
Match: AT3G47620.1 (TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14 )

HSP 1 Score: 127.9 bits (320), Expect = 1.6e-29
Identity = 78/148 (52.70%), Postives = 97/148 (65.54%), Query Frame = 0


Query: 11  DDDDEDSPVTDLRMNDSDSSRMDLLALAPKQ-----EDPDDSHDSDPPPSQIQVVNFAPE 70
           DD+ +  P        S SS   L +L   Q     +    S  S P  +Q +++    E
Sbjct: 50  DDNHQQQP--------SPSSSSSLFSLHQHQQLSQSQPQSQSQKSQPQTTQKELLQTQEE 109

Query: 71  IAKTVSVLPP-KRASTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWLL 130
            A   +  PP KRASTKDRHTKV+GRGRRIR+PA CAAR+FQLTRELGHKSDGETI WLL
Sbjct: 110 SAVVAAKKPPLKRASTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLL 169

Query: 131 ERAEPAIIAATGTGTIPAIAMSVNGTLK 153
           ++AEP++IAATGTGTIPA   S+N +L+
Sbjct: 170 QQAEPSVIAATGTGTIPANFTSLNISLR 189

[Close]

BLAST of Carg11101 vs. TAIR 10
Match: AT3G27010.1 (TEOSINTE BRANCHED 1, cycloidea, PCF (TCP)-domain family protein 20 )

HSP 1 Score: 125.9 bits (315), Expect = 6.0e-29
Identity = 67/107 (62.62%), Postives = 81/107 (75.70%), Query Frame = 0


Query: 73  LPPKRASTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWLLERAEPAII 132
           L PKR+S KDRHTKVEGRGRRIR+PA CAARIFQLTRELGHKSDGETI+WLL++AEP+II
Sbjct: 71  LGPKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSII 130

Query: 133 AATGTGTIPAIAMSVN---------GTLKIPTTTSSNQDSADQSAGK 171
           AATG+GTIPA A++ +         G+L      S + D    S+G+
Sbjct: 131 AATGSGTIPASALASSAATSNHHQGGSLTAGLMISHDLDGGSSSSGR 177

The following BLAST results are available for this feature:

BLAST of Carg11101 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7026035.1	2.6e-175	100.00	Transcription factor TCP9, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022964565.1	5.8e-175	99.71	transcription factor TCP9 [Cucurbita moschata]	[more]
KAG6593695.1	5.8e-175	99.71	Transcription factor TCP9, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023515272.1	2.4e-173	99.12	transcription factor TCP9 [Cucurbita pepo subsp. pepo]	[more]
XP_022999831.1	1.6e-172	98.83	transcription factor TCP9 [Cucurbita maxima]	[more]

BLAST of Carg11101 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O64647	2.7e-66	50.68	Transcription factor TCP9 OS=Arabidopsis thaliana OX=3702 GN=TCP9 PE=1 SV=1	[more]
Q9LT89	3.9e-49	46.03	Transcription factor TCP19 OS=Arabidopsis thaliana OX=3702 GN=TCP19 PE=1 SV=1	[more]
A2YXQ1	3.3e-32	43.92	Transcription factor PCF2 OS=Oryza sativa subsp. indica OX=39946 GN=PCF2 PE=4 SV...	[more]
Q6ZBH6	3.3e-32	43.92	Transcription factor PCF2 OS=Oryza sativa subsp. japonica OX=39947 GN=PCF2 PE=1 ...	[more]
Q93Z00	2.2e-28	52.70	Transcription factor TCP14 OS=Arabidopsis thaliana OX=3702 GN=TCP14 PE=1 SV=1	[more]

BLAST of Carg11101 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HL63	2.8e-175	99.71	transcription factor TCP9 OS=Cucurbita moschata OX=3662 GN=LOC111464552 PE=4 SV=...	[more]
A0A6J1KE73	7.6e-173	98.83	transcription factor TCP9 OS=Cucurbita maxima OX=3661 GN=LOC111494185 PE=4 SV=1	[more]
A0A1S3CBF3	8.8e-129	79.53	transcription factor TCP9 OS=Cucumis melo OX=3656 GN=LOC103499048 PE=4 SV=1	[more]
A0A6J1L1L3	3.7e-127	75.92	transcription factor TCP9-like OS=Cucurbita maxima OX=3661 GN=LOC111499026 PE=4 ...	[more]
A0A0A0KCU1	4.9e-127	80.12	TCP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G075180 PE=4 SV...	[more]

BLAST of Carg11101 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G45680.1	1.9e-67	50.68	TCP family transcription factor	[more]
AT5G51910.1	2.8e-50	46.03	TCP family transcription factor	[more]
AT5G51910.2	2.8e-50	46.03	TCP family transcription factor	[more]
AT3G47620.1	1.6e-29	52.70	TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14	[more]
AT3G27010.1	6.0e-29	62.62	TEOSINTE BRANCHED 1, cycloidea, PCF (TCP)-domain family protein 20	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR017887	Transcription factor TCP subgroup	PFAM	PF03634	TCP	coord: 79..177 e-value: 3.8E-30 score: 105.5
IPR017887	Transcription factor TCP subgroup	PROSITE	PS51369	TCP	coord: 80..134 score: 26.203869
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..56
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 268..313
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 166..180
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 154..180
None	No IPR available	PANTHER	PTHR31072:SF83	TRANSCRIPTION FACTOR TCP9	coord: 18..339
IPR005333	Transcription factor, TCP	PANTHER	PTHR31072	TRANSCRIPTION FACTOR TCP4-RELATED	coord: 18..339

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg11101-RA	Carg11101-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:1900056	negative regulation of leaf senescence
biological_process	GO:0008361	regulation of cell size
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0048364	root development
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0000976	transcription cis-regulatory region binding