Carg10972 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg10972
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	casein kinase 1-like protein 10
Location	Carg_Chr08: 6360844 .. 6362455 (-)
RNA-Seq Expression	Carg10972
Synteny	Carg10972

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTCGTGTCGAGGTCTTGTAGCATTTGGGTCGTTCATGTTCGACTGGATTGTCTATTAGTTCCTTTAATTTGTTTAGTTGAACATACTCTCTTTGAATGTCATTTAGTGGGACAAGATCTCCGTGATAAATTTTCGGGTGCCGTGGAGGCTTTTGCTAGAAGGAATGGCACTGGACATGGTCTACACAGTGATCACTCCAGACATAGATCCTCTGATGATGTGCCTTCCTCCAAGGATGTGGTGAGTTGAATCATCCACAAGAAAATCATATACTAGAATTCTTTGCCTTTGGTTGCTATCCAGTTCTCTGGTAATATTATCTCCAGTTATAGTATTTCTCTACCTCCTCCAATATTGCAGCAACCGGATTCGGAAAGAGCACGGAGTTCTTCTCGACAAGGGAGTGCTTCTAAGAGACCTATCTTATCCAGCAGCCGGCCTAGCTCCTCTGGGGAGCCAAGTGAACTCCGCTCAAGCCGACTTTTCTCAAGCAGCAGTCGACTGTCTGCTTCTACTCAACGAGTTGAGCCAAAATCATCCTTCCTCCGTTCTTCGGTTACAAAAGGCAGCCACGATGATGCCCTTCGAAGCTTTGAACTATTATCGATTGGCACCGGAAAGAAGAAATAAGAAGCAATCATCGGGTGAGGGAATGCATGCTTTCTCTCTGTTGTTCCCGTTGGATTGCATCAATATGATGATGATTTCTAACATTTGTATGGTGTCTTCATATTCATCTCTGGATTCCATCCTCAGGTATGGAACTTAAAAAAACTATCTCCCGCCTCCCCCGACCCGCCCCCAGTATGTATATGTGCCTCTTCAGGGGTTCATATTAGTTTATATAAACCTTTTAGACTCATGAAACAGAGAGAAATTAACAAAGCTCCGGGAAATTGTTGATACATTTGAGGCAGCTGTAACTGTAATAAGTACCTCTAGCATATTCATTCTTTCATGGTAAAGAGTTTCGACATGGAACCCGGGAGACTTCGATGATAATGATGATGATGATGATGATGCAACGGATGGAGATGACTCGTTTGAACTCGTTTTTTTTTGTTCTTGGATGATGAATAGAAAGAAACCTCAGCTTTAACTTTCTGTGTTAATTATACATCTGCTGCTGCATACTGTTTTCTTATGAGGATCTGATTTTCCAATGACTTTTACTTTCCCTTTCAATTTCAAATAATATGCCTGTAATGGGGTGAACAAATATTTGCCTTTATGGATGATAGTGTGCTCGAACAGTTCAAACTAGTTCGGATGAACTCATCCGAACTAATGTTTTATTTTTAATCGTTCAACATAAATAGGTTGAGATTCTTTTAGAACTCTGTAACTCACTGTAGCTCGAGAAACGGAGACAAGATGTGTATGAACGAGATATACAACAGAAAGAAGAACTGAATAGAATTTTTGAATGTTTGGTGATCTTAGATGTGTTGATATCGATGATAACTCCTCGACTCGATGAATCATTTCATCCGAACAAAAAAGATTGTGTAAATACTTACGTAAAATCTCACTTATTAAATTCTATTGTTGAACACAACTTTTTTTTTTTTTTTTTGAAAAGAAAGGAATGGTCCTACGTTTTAGCAAT

mRNA sequence

ATGGTCGTGTCGAGGTCTTGTAGCATTTGGGTCGTTCATGTTCGACTGGATTGTCTATTAGTTCCTTTAATTTGTTTAGTTGAACATACTCTCTTTGAATGTCATTTAGTGGGACAAGATCTCCGTGATAAATTTTCGGGTGCCGTGGAGGCTTTTGCTAGAAGGAATGGCACTGGACATGGTCTACACAGTGATCACTCCAGACATAGATCCTCTGATGATGTGCCTTCCTCCAAGGATGTGCAACCGGATTCGGAAAGAGCACGGAGTTCTTCTCGACAAGGGAGTGCTTCTAAGAGACCTATCTTATCCAGCAGCCGGCCTAGCTCCTCTGGGGAGCCAAGTGAACTCCGCTCAAGCCGACTTTTCTCAAGCAGCAGTCGACTGTCTGCTTCTACTCAACGAGTTGAGCCAAAATCATCCTTCCTCCGTTCTTCGGTTACAAAAGGCAGCCACGATGATGCCCTTCGAAGCTTTGAACTATTATCGATTGGCACCGGAAAGAAGAAATAAGAAGCAATCATCGGGTGAGGGAATGCATGCTTTCTCTCTGTTGTTCCCGTTGGATTGCATCAATATGATGATGATTTCTAACATTTGTATGGTGTCTTCATATTCATCTCTGGATTCCATCCTCAGGTATGGAACTTAAAAAAACTATCTCCCGCCTCCCCCGACCCGCCCCCAGTATGTATATGTGCCTCTTCAGGGGTTCATATTAGTTTATATAAACCTTTTAGACTCATGAAACAGAGAGAAATTAACAAAGCTCCGGGAAATTGTTGATACATTTGAGGCAGCTGTAACTGTAATAAGTACCTCTAGCATATTCATTCTTTCATGGTAAAGAGTTTCGACATGGAACCCGGGAGACTTCGATGATAATGATGATGATGATGATGATGCAACGGATGGAGATGACTCGTTTGAACTCGTTTTTTTTTGTTCTTGGATGATGAATAGAAAGAAACCTCAGCTTTAACTTTCTGTGTTAATTATACATCTGCTGCTGCATACTGTTTTCTTATGAGGATCTGATTTTCCAATGACTTTTACTTTCCCTTTCAATTTCAAATAATATGCCTGTAATGGGGTGAACAAATATTTGCCTTTATGGATGATAGTGTGCTCGAACAGTTCAAACTAGTTCGGATGAACTCATCCGAACTAATGTTTTATTTTTAATCGTTCAACATAAATAGGTTGAGATTCTTTTAGAACTCTGTAACTCACTGTAGCTCGAGAAACGGAGACAAGATGTGTATGAACGAGATATACAACAGAAAGAAGAACTGAATAGAATTTTTGAATGTTTGGTGATCTTAGATGTGTTGATATCGATGATAACTCCTCGACTCGATGAATCATTTCATCCGAACAAAAAAGATTGTGTAAATACTTACGTAAAATCTCACTTATTAAATTCTATTGTTGAACACAACTTTTTTTTTTTTTTTTTGAAAAGAAAGGAATGGTCCTACGTTTTAGCAAT

Coding sequence (CDS)

ATGGTCGTGTCGAGGTCTTGTAGCATTTGGGTCGTTCATGTTCGACTGGATTGTCTATTAGTTCCTTTAATTTGTTTAGTTGAACATACTCTCTTTGAATGTCATTTAGTGGGACAAGATCTCCGTGATAAATTTTCGGGTGCCGTGGAGGCTTTTGCTAGAAGGAATGGCACTGGACATGGTCTACACAGTGATCACTCCAGACATAGATCCTCTGATGATGTGCCTTCCTCCAAGGATGTGCAACCGGATTCGGAAAGAGCACGGAGTTCTTCTCGACAAGGGAGTGCTTCTAAGAGACCTATCTTATCCAGCAGCCGGCCTAGCTCCTCTGGGGAGCCAAGTGAACTCCGCTCAAGCCGACTTTTCTCAAGCAGCAGTCGACTGTCTGCTTCTACTCAACGAGTTGAGCCAAAATCATCCTTCCTCCGTTCTTCGGTTACAAAAGGCAGCCACGATGATGCCCTTCGAAGCTTTGAACTATTATCGATTGGCACCGGAAAGAAGAAATAA

Protein sequence

MVVSRSCSIWVVHVRLDCLLVPLICLVEHTLFECHLVGQDLRDKFSGAVEAFARRNGTGHGLHSDHSRHRSSDDVPSSKDVQPDSERARSSSRQGSASKRPILSSSRPSSSGEPSELRSSRLFSSSSRLSASTQRVEPKSSFLRSSVTKGSHDDALRSFELLSIGTGKKK

Homology

[Close]

BLAST of Carg10972 vs. NCBI nr
Match: KAG7026162.1 (Casein kinase 1-like protein 11, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 313.9 bits (803), Expect = 8.4e-82
Identity = 170/170 (100.00%), Postives = 170/170 (100.00%), Query Frame = 0


Query: 1   MVVSRSCSIWVVHVRLDCLLVPLICLVEHTLFECHLVGQDLRDKFSGAVEAFARRNGTGH 60
           MVVSRSCSIWVVHVRLDCLLVPLICLVEHTLFECHLVGQDLRDKFSGAVEAFARRNGTGH
Sbjct: 1   MVVSRSCSIWVVHVRLDCLLVPLICLVEHTLFECHLVGQDLRDKFSGAVEAFARRNGTGH 60

Query: 61  GLHSDHSRHRSSDDVPSSKDVQPDSERARSSSRQGSASKRPILSSSRPSSSGEPSELRSS 120
           GLHSDHSRHRSSDDVPSSKDVQPDSERARSSSRQGSASKRPILSSSRPSSSGEPSELRSS
Sbjct: 61  GLHSDHSRHRSSDDVPSSKDVQPDSERARSSSRQGSASKRPILSSSRPSSSGEPSELRSS 120

Query: 121 RLFSSSSRLSASTQRVEPKSSFLRSSVTKGSHDDALRSFELLSIGTGKKK 171
           RLFSSSSRLSASTQRVEPKSSFLRSSVTKGSHDDALRSFELLSIGTGKKK
Sbjct: 121 RLFSSSSRLSASTQRVEPKSSFLRSSVTKGSHDDALRSFELLSIGTGKKK 170

[Close]

BLAST of Carg10972 vs. NCBI nr
Match: XP_022964246.1 (casein kinase 1-like protein 10 isoform X2 [Cucurbita moschata])

HSP 1 Score: 242.7 bits (618), Expect = 2.4e-60
Identity = 135/135 (100.00%), Postives = 135/135 (100.00%), Query Frame = 0


Query: 36  LVGQDLRDKFSGAVEAFARRNGTGHGLHSDHSRHRSSDDVPSSKDVQPDSERARSSSRQG 95
           LVGQDLRDKFSGAVEAFARRNGTGHGLHSDHSRHRSSDDVPSSKDVQPDSERARSSSRQG
Sbjct: 325 LVGQDLRDKFSGAVEAFARRNGTGHGLHSDHSRHRSSDDVPSSKDVQPDSERARSSSRQG 384

Query: 96  SASKRPILSSSRPSSSGEPSELRSSRLFSSSSRLSASTQRVEPKSSFLRSSVTKGSHDDA 155
           SASKRPILSSSRPSSSGEPSELRSSRLFSSSSRLSASTQRVEPKSSFLRSSVTKGSHDDA
Sbjct: 385 SASKRPILSSSRPSSSGEPSELRSSRLFSSSSRLSASTQRVEPKSSFLRSSVTKGSHDDA 444

Query: 156 LRSFELLSIGTGKKK 171
           LRSFELLSIGTGKKK
Sbjct: 445 LRSFELLSIGTGKKK 459

[Close]

BLAST of Carg10972 vs. NCBI nr
Match: XP_023000502.1 (casein kinase 1-like protein 10 isoform X2 [Cucurbita maxima])

HSP 1 Score: 242.7 bits (618), Expect = 2.4e-60
Identity = 135/135 (100.00%), Postives = 135/135 (100.00%), Query Frame = 0


Query: 36  LVGQDLRDKFSGAVEAFARRNGTGHGLHSDHSRHRSSDDVPSSKDVQPDSERARSSSRQG 95
           LVGQDLRDKFSGAVEAFARRNGTGHGLHSDHSRHRSSDDVPSSKDVQPDSERARSSSRQG
Sbjct: 325 LVGQDLRDKFSGAVEAFARRNGTGHGLHSDHSRHRSSDDVPSSKDVQPDSERARSSSRQG 384

Query: 96  SASKRPILSSSRPSSSGEPSELRSSRLFSSSSRLSASTQRVEPKSSFLRSSVTKGSHDDA 155
           SASKRPILSSSRPSSSGEPSELRSSRLFSSSSRLSASTQRVEPKSSFLRSSVTKGSHDDA
Sbjct: 385 SASKRPILSSSRPSSSGEPSELRSSRLFSSSSRLSASTQRVEPKSSFLRSSVTKGSHDDA 444

Query: 156 LRSFELLSIGTGKKK 171
           LRSFELLSIGTGKKK
Sbjct: 445 LRSFELLSIGTGKKK 459

[Close]

BLAST of Carg10972 vs. NCBI nr
Match: XP_023000500.1 (casein kinase 1-like protein 10 isoform X1 [Cucurbita maxima] >XP_023000501.1 casein kinase 1-like protein 10 isoform X1 [Cucurbita maxima])

HSP 1 Score: 242.7 bits (618), Expect = 2.4e-60
Identity = 135/135 (100.00%), Postives = 135/135 (100.00%), Query Frame = 0


Query: 36  LVGQDLRDKFSGAVEAFARRNGTGHGLHSDHSRHRSSDDVPSSKDVQPDSERARSSSRQG 95
           LVGQDLRDKFSGAVEAFARRNGTGHGLHSDHSRHRSSDDVPSSKDVQPDSERARSSSRQG
Sbjct: 326 LVGQDLRDKFSGAVEAFARRNGTGHGLHSDHSRHRSSDDVPSSKDVQPDSERARSSSRQG 385

Query: 96  SASKRPILSSSRPSSSGEPSELRSSRLFSSSSRLSASTQRVEPKSSFLRSSVTKGSHDDA 155
           SASKRPILSSSRPSSSGEPSELRSSRLFSSSSRLSASTQRVEPKSSFLRSSVTKGSHDDA
Sbjct: 386 SASKRPILSSSRPSSSGEPSELRSSRLFSSSSRLSASTQRVEPKSSFLRSSVTKGSHDDA 445

Query: 156 LRSFELLSIGTGKKK 171
           LRSFELLSIGTGKKK
Sbjct: 446 LRSFELLSIGTGKKK 460

[Close]

BLAST of Carg10972 vs. NCBI nr
Match: XP_022964243.1 (casein kinase 1-like protein 10 isoform X1 [Cucurbita moschata] >XP_022964244.1 casein kinase 1-like protein 10 isoform X1 [Cucurbita moschata] >XP_022964245.1 casein kinase 1-like protein 10 isoform X1 [Cucurbita moschata])

HSP 1 Score: 242.7 bits (618), Expect = 2.4e-60
Identity = 135/135 (100.00%), Postives = 135/135 (100.00%), Query Frame = 0


Query: 36  LVGQDLRDKFSGAVEAFARRNGTGHGLHSDHSRHRSSDDVPSSKDVQPDSERARSSSRQG 95
           LVGQDLRDKFSGAVEAFARRNGTGHGLHSDHSRHRSSDDVPSSKDVQPDSERARSSSRQG
Sbjct: 326 LVGQDLRDKFSGAVEAFARRNGTGHGLHSDHSRHRSSDDVPSSKDVQPDSERARSSSRQG 385

Query: 96  SASKRPILSSSRPSSSGEPSELRSSRLFSSSSRLSASTQRVEPKSSFLRSSVTKGSHDDA 155
           SASKRPILSSSRPSSSGEPSELRSSRLFSSSSRLSASTQRVEPKSSFLRSSVTKGSHDDA
Sbjct: 386 SASKRPILSSSRPSSSGEPSELRSSRLFSSSSRLSASTQRVEPKSSFLRSSVTKGSHDDA 445

Query: 156 LRSFELLSIGTGKKK 171
           LRSFELLSIGTGKKK
Sbjct: 446 LRSFELLSIGTGKKK 460

[Close]

BLAST of Carg10972 vs. ExPASy Swiss-Prot
Match: Q39050 (Casein kinase 1-like protein 11 OS=Arabidopsis thaliana OX=3702 GN=CKL11 PE=1 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 5.7e-25
Identity = 75/135 (55.56%), Postives = 95/135 (70.37%), Query Frame = 0


Query: 37  VGQDLRDKFSGAVEAFARRNGTGHGLHSDHSRHRSSDDVPSS-KDVQPDSERARSSSRQG 96
           VGQDLR +F+GA+EAF RRN +  G   D SRHRSSDD+PSS K+V          SR G
Sbjct: 333 VGQDLRGRFTGAIEAFTRRNVSSQGALGDRSRHRSSDDIPSSAKEVH--------ESRNG 392

Query: 97  SASKRPILSSSRPSSSGEPSELRSSRLFSSSSRLSASTQRVEPKSSFLRSSVTKGSHDDA 156
           S SKR ++SS+RP SS EPSE  SSRLFSS SR  A+TQRV    S+  ++  +  H+DA
Sbjct: 393 STSKRGVISSTRPGSSAEPSENHSSRLFSSGSR-HATTQRV--PQSYESAAAARPGHEDA 452

Query: 157 LRSFELLSIGTGKKK 171
           +R+FELL+IG+GKK+
Sbjct: 453 IRNFELLTIGSGKKR 456

[Close]

BLAST of Carg10972 vs. ExPASy Swiss-Prot
Match: Q8LPJ1 (Casein kinase 1-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=CKL6 PE=1 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 4.4e-17
Identity = 70/141 (49.65%), Postives = 92/141 (65.25%), Query Frame = 0


Query: 40  DLRDKFSGAVEAFARRNGTGHGLHSDHSRHRSSDDVPSSKD-VQPDSERARSSSRQGSAS 99
           ++RDKFSGAVEAFARRN  G   H +H+RHR+ D++PS K  V   SE+ R++SR GSAS
Sbjct: 337 NIRDKFSGAVEAFARRNVRGPSPHQNHTRHRTLDEIPSMKPAVNMVSEKGRNTSRYGSAS 396

Query: 100 KRPILSSSRPSSSGEPSELR-SSRLFSSS----------SRLSASTQRVEPK--SSFLRS 159
           +R + S SRPSSSGE  E R SSR+ SS           ++ +A+    E K  S+F R 
Sbjct: 397 RRAVASGSRPSSSGEQRESRDSSRVASSGGGVRPSVFQRTQAAAAVSGYESKTASAFNRD 456

Query: 160 SV--TKGSHDDALRSFELLSI 165
            V  ++ + D+ALRSFELLSI
Sbjct: 457 RVAASRTARDEALRSFELLSI 477

[Close]

BLAST of Carg10972 vs. ExPASy Swiss-Prot
Match: Q9LSX4 (Casein kinase 1-like protein 8 OS=Arabidopsis thaliana OX=3702 GN=CKL8 PE=2 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 7.5e-17
Identity = 67/148 (45.27%), Postives = 99/148 (66.89%), Query Frame = 0


Query: 38  GQDLRDKFSGAVEAFARRNGTGHG-LHSDHSRHRSSDDV-PSSKDVQPDS----ERARSS 97
           GQD RD+FSGA+EA+ARRNG+G G + +D SR R+S++V  SSKD  P +    ER  SS
Sbjct: 334 GQDSRDRFSGALEAYARRNGSGSGVVQADRSRPRTSENVLASSKDTTPQNYERVERPISS 393

Query: 98  SRQGSASKRPILSSSRPSSSGEPSELRSSRLFSSSSRLSASTQRVE---------PKSSF 157
           +R  S+S++ ++SS R +SS + +E RSSR+  S+ R S++ QR +           SSF
Sbjct: 394 TRHASSSRKAVVSSVRATSSADFTENRSSRVVPSNGR-SSTAQRTQLVPDPTTRPSSSSF 453

Query: 158 LRSSVTKGSHDDALRSFELLSIGTGKKK 171
            R++ ++ + D  L+SFELL+IG GK+K
Sbjct: 454 TRAAPSRTARDITLQSFELLTIGNGKRK 480

[Close]

BLAST of Carg10972 vs. ExPASy Swiss-Prot
Match: Q9LW62 (Casein kinase 1-like protein 10 OS=Arabidopsis thaliana OX=3702 GN=CKL10 PE=2 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 3.7e-16
Identity = 66/135 (48.89%), Postives = 91/135 (67.41%), Query Frame = 0


Query: 36  LVGQDLRDKFSGAVEAFARRNGTGHGLHSDHSRHRSSDDVPSSKDVQPDSERARSSSRQG 95
           +VGQDLR++FSGAVEAFARRN   HG+     +H  SDD  +SK+VQ  SE+ R+     
Sbjct: 326 IVGQDLRERFSGAVEAFARRNVPSHGI---RPKHIFSDD--ASKEVQV-SEKTRNE---- 385

Query: 96  SASKRPILSSSRPSSSGEPSELRSSRLFSSSSRLSASTQRVEPKSSFLRSSVTKGSHDDA 155
            A+K  ++SSS+P SSGE SE RSS+LFSSS+      Q+++P      S+  +   DD 
Sbjct: 386 IATKMAVMSSSQPGSSGELSENRSSKLFSSSA------QKIQPVQETKLSA--RLGRDDG 442

Query: 156 LRSFELLSIGTGKKK 171
           LRSF++L+IG+GK+K
Sbjct: 446 LRSFDMLTIGSGKRK 442

[Close]

BLAST of Carg10972 vs. ExPASy Swiss-Prot
Match: Q9FFH8 (Casein kinase 1-like protein 7 OS=Arabidopsis thaliana OX=3702 GN=CKL7 PE=2 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 3.8e-13
Identity = 68/139 (48.92%), Postives = 86/139 (61.87%), Query Frame = 0


Query: 42  RDKFSGAVEAFARRNGTGHGLHSDHSRHRSSDDVPSSKDVQPDSERARSSSRQGSASKRP 101
           R K  GAVEAF+RR+ T      D SR R+SDD P SK    DSERA SSSR  ++S R 
Sbjct: 336 RYKIPGAVEAFSRRHPTTTSSPRDRSRSRNSDDGPFSKQTHGDSERANSSSRYRASSSRK 395

Query: 102 IL--SSSRPSSSGEPSELR-SSRLFSSS--------SRLSASTQRV----EPKS-SFLRS 161
            +  SSSRPSS+G PSE R SSRL SSS        +   +++QRV    E K+ SF R+
Sbjct: 396 AVAASSSRPSSAGGPSESRTSSRLVSSSGGGGSGSGNGRPSTSQRVQAGYESKTLSFSRA 455

Query: 162 SVTKGSHDDALRSFELLSI 165
           +  + + +D LRSFELLS+
Sbjct: 456 TAARNTREDQLRSFELLSL 474

[Close]

BLAST of Carg10972 vs. ExPASy TrEMBL
Match: A0A6J1KII8 (casein kinase 1-like protein 10 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111494752 PE=3 SV=1)

HSP 1 Score: 242.7 bits (618), Expect = 1.1e-60
Identity = 135/135 (100.00%), Postives = 135/135 (100.00%), Query Frame = 0


Query: 36  LVGQDLRDKFSGAVEAFARRNGTGHGLHSDHSRHRSSDDVPSSKDVQPDSERARSSSRQG 95
           LVGQDLRDKFSGAVEAFARRNGTGHGLHSDHSRHRSSDDVPSSKDVQPDSERARSSSRQG
Sbjct: 326 LVGQDLRDKFSGAVEAFARRNGTGHGLHSDHSRHRSSDDVPSSKDVQPDSERARSSSRQG 385

Query: 96  SASKRPILSSSRPSSSGEPSELRSSRLFSSSSRLSASTQRVEPKSSFLRSSVTKGSHDDA 155
           SASKRPILSSSRPSSSGEPSELRSSRLFSSSSRLSASTQRVEPKSSFLRSSVTKGSHDDA
Sbjct: 386 SASKRPILSSSRPSSSGEPSELRSSRLFSSSSRLSASTQRVEPKSSFLRSSVTKGSHDDA 445

Query: 156 LRSFELLSIGTGKKK 171
           LRSFELLSIGTGKKK
Sbjct: 446 LRSFELLSIGTGKKK 460

[Close]

BLAST of Carg10972 vs. ExPASy TrEMBL
Match: A0A6J1HKA3 (casein kinase 1-like protein 10 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111464323 PE=3 SV=1)

HSP 1 Score: 242.7 bits (618), Expect = 1.1e-60
Identity = 135/135 (100.00%), Postives = 135/135 (100.00%), Query Frame = 0


Query: 36  LVGQDLRDKFSGAVEAFARRNGTGHGLHSDHSRHRSSDDVPSSKDVQPDSERARSSSRQG 95
           LVGQDLRDKFSGAVEAFARRNGTGHGLHSDHSRHRSSDDVPSSKDVQPDSERARSSSRQG
Sbjct: 326 LVGQDLRDKFSGAVEAFARRNGTGHGLHSDHSRHRSSDDVPSSKDVQPDSERARSSSRQG 385

Query: 96  SASKRPILSSSRPSSSGEPSELRSSRLFSSSSRLSASTQRVEPKSSFLRSSVTKGSHDDA 155
           SASKRPILSSSRPSSSGEPSELRSSRLFSSSSRLSASTQRVEPKSSFLRSSVTKGSHDDA
Sbjct: 386 SASKRPILSSSRPSSSGEPSELRSSRLFSSSSRLSASTQRVEPKSSFLRSSVTKGSHDDA 445

Query: 156 LRSFELLSIGTGKKK 171
           LRSFELLSIGTGKKK
Sbjct: 446 LRSFELLSIGTGKKK 460

[Close]

BLAST of Carg10972 vs. ExPASy TrEMBL
Match: A0A6J1KDT6 (casein kinase 1-like protein 10 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111494752 PE=3 SV=1)

HSP 1 Score: 242.7 bits (618), Expect = 1.1e-60
Identity = 135/135 (100.00%), Postives = 135/135 (100.00%), Query Frame = 0


Query: 36  LVGQDLRDKFSGAVEAFARRNGTGHGLHSDHSRHRSSDDVPSSKDVQPDSERARSSSRQG 95
           LVGQDLRDKFSGAVEAFARRNGTGHGLHSDHSRHRSSDDVPSSKDVQPDSERARSSSRQG
Sbjct: 325 LVGQDLRDKFSGAVEAFARRNGTGHGLHSDHSRHRSSDDVPSSKDVQPDSERARSSSRQG 384

Query: 96  SASKRPILSSSRPSSSGEPSELRSSRLFSSSSRLSASTQRVEPKSSFLRSSVTKGSHDDA 155
           SASKRPILSSSRPSSSGEPSELRSSRLFSSSSRLSASTQRVEPKSSFLRSSVTKGSHDDA
Sbjct: 385 SASKRPILSSSRPSSSGEPSELRSSRLFSSSSRLSASTQRVEPKSSFLRSSVTKGSHDDA 444

Query: 156 LRSFELLSIGTGKKK 171
           LRSFELLSIGTGKKK
Sbjct: 445 LRSFELLSIGTGKKK 459

[Close]

BLAST of Carg10972 vs. ExPASy TrEMBL
Match: A0A6J1HID5 (casein kinase 1-like protein 10 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111464323 PE=3 SV=1)

HSP 1 Score: 242.7 bits (618), Expect = 1.1e-60
Identity = 135/135 (100.00%), Postives = 135/135 (100.00%), Query Frame = 0


Query: 36  LVGQDLRDKFSGAVEAFARRNGTGHGLHSDHSRHRSSDDVPSSKDVQPDSERARSSSRQG 95
           LVGQDLRDKFSGAVEAFARRNGTGHGLHSDHSRHRSSDDVPSSKDVQPDSERARSSSRQG
Sbjct: 325 LVGQDLRDKFSGAVEAFARRNGTGHGLHSDHSRHRSSDDVPSSKDVQPDSERARSSSRQG 384

Query: 96  SASKRPILSSSRPSSSGEPSELRSSRLFSSSSRLSASTQRVEPKSSFLRSSVTKGSHDDA 155
           SASKRPILSSSRPSSSGEPSELRSSRLFSSSSRLSASTQRVEPKSSFLRSSVTKGSHDDA
Sbjct: 385 SASKRPILSSSRPSSSGEPSELRSSRLFSSSSRLSASTQRVEPKSSFLRSSVTKGSHDDA 444

Query: 156 LRSFELLSIGTGKKK 171
           LRSFELLSIGTGKKK
Sbjct: 445 LRSFELLSIGTGKKK 459

[Close]

BLAST of Carg10972 vs. ExPASy TrEMBL
Match: A0A0A0LII2 (Protein kinase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G174100 PE=3 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 4.7e-54
Identity = 126/139 (90.65%), Postives = 130/139 (93.53%), Query Frame = 0


Query: 36  LVGQDLRDKFSGAVEAFARRNGTGHGLHSDHSRHRSSDDVPSSKDVQPDSERARSSSRQG 95
           LVGQDLRDKFSG VEAFARRNGTG GLHSDHSRHRSSDDVPSSKDVQPD+ERARSSSRQG
Sbjct: 325 LVGQDLRDKFSGPVEAFARRNGTGIGLHSDHSRHRSSDDVPSSKDVQPDAERARSSSRQG 384

Query: 96  SASKRPILSSSRPSSSGEPSELRSSRLFSSSSRLSASTQRVEP----KSSFLRSSVTKGS 155
           SASKRPILSSSRPSSSGEPSELRSSRLFSSSSRLS STQR++P    KSSFLRSS TKGS
Sbjct: 385 SASKRPILSSSRPSSSGEPSELRSSRLFSSSSRLSGSTQRIQPGVESKSSFLRSSATKGS 444

Query: 156 HDDALRSFELLSIGTGKKK 171
            DDALRSFELL+IGTGKKK
Sbjct: 445 RDDALRSFELLTIGTGKKK 463

[Close]

BLAST of Carg10972 vs. TAIR 10
Match: AT4G14340.1 (casein kinase I )

HSP 1 Score: 115.5 bits (288), Expect = 4.1e-26
Identity = 75/135 (55.56%), Postives = 95/135 (70.37%), Query Frame = 0


Query: 37  VGQDLRDKFSGAVEAFARRNGTGHGLHSDHSRHRSSDDVPSS-KDVQPDSERARSSSRQG 96
           VGQDLR +F+GA+EAF RRN +  G   D SRHRSSDD+PSS K+V          SR G
Sbjct: 333 VGQDLRGRFTGAIEAFTRRNVSSQGALGDRSRHRSSDDIPSSAKEVH--------ESRNG 392

Query: 97  SASKRPILSSSRPSSSGEPSELRSSRLFSSSSRLSASTQRVEPKSSFLRSSVTKGSHDDA 156
           S SKR ++SS+RP SS EPSE  SSRLFSS SR  A+TQRV    S+  ++  +  H+DA
Sbjct: 393 STSKRGVISSTRPGSSAEPSENHSSRLFSSGSR-HATTQRV--PQSYESAAAARPGHEDA 452

Query: 157 LRSFELLSIGTGKKK 171
           +R+FELL+IG+GKK+
Sbjct: 453 IRNFELLTIGSGKKR 456

[Close]

BLAST of Carg10972 vs. TAIR 10
Match: AT4G28540.1 (casein kinase I-like 6 )

HSP 1 Score: 89.4 bits (220), Expect = 3.1e-18
Identity = 70/141 (49.65%), Postives = 92/141 (65.25%), Query Frame = 0


Query: 40  DLRDKFSGAVEAFARRNGTGHGLHSDHSRHRSSDDVPSSKD-VQPDSERARSSSRQGSAS 99
           ++RDKFSGAVEAFARRN  G   H +H+RHR+ D++PS K  V   SE+ R++SR GSAS
Sbjct: 337 NIRDKFSGAVEAFARRNVRGPSPHQNHTRHRTLDEIPSMKPAVNMVSEKGRNTSRYGSAS 396

Query: 100 KRPILSSSRPSSSGEPSELR-SSRLFSSS----------SRLSASTQRVEPK--SSFLRS 159
           +R + S SRPSSSGE  E R SSR+ SS           ++ +A+    E K  S+F R 
Sbjct: 397 RRAVASGSRPSSSGEQRESRDSSRVASSGGGVRPSVFQRTQAAAAVSGYESKTASAFNRD 456

Query: 160 SV--TKGSHDDALRSFELLSI 165
            V  ++ + D+ALRSFELLSI
Sbjct: 457 RVAASRTARDEALRSFELLSI 477

[Close]

BLAST of Carg10972 vs. TAIR 10
Match: AT5G43320.1 (casein kinase I-like 8 )

HSP 1 Score: 88.6 bits (218), Expect = 5.3e-18
Identity = 67/148 (45.27%), Postives = 99/148 (66.89%), Query Frame = 0


Query: 38  GQDLRDKFSGAVEAFARRNGTGHG-LHSDHSRHRSSDDV-PSSKDVQPDS----ERARSS 97
           GQD RD+FSGA+EA+ARRNG+G G + +D SR R+S++V  SSKD  P +    ER  SS
Sbjct: 334 GQDSRDRFSGALEAYARRNGSGSGVVQADRSRPRTSENVLASSKDTTPQNYERVERPISS 393

Query: 98  SRQGSASKRPILSSSRPSSSGEPSELRSSRLFSSSSRLSASTQRVE---------PKSSF 157
           +R  S+S++ ++SS R +SS + +E RSSR+  S+ R S++ QR +           SSF
Sbjct: 394 TRHASSSRKAVVSSVRATSSADFTENRSSRVVPSNGR-SSTAQRTQLVPDPTTRPSSSSF 453

Query: 158 LRSSVTKGSHDDALRSFELLSIGTGKKK 171
            R++ ++ + D  L+SFELL+IG GK+K
Sbjct: 454 TRAAPSRTARDITLQSFELLTIGNGKRK 480

[Close]

BLAST of Carg10972 vs. TAIR 10
Match: AT3G23340.1 (casein kinase I-like 10 )

HSP 1 Score: 86.3 bits (212), Expect = 2.6e-17
Identity = 66/135 (48.89%), Postives = 91/135 (67.41%), Query Frame = 0


Query: 36  LVGQDLRDKFSGAVEAFARRNGTGHGLHSDHSRHRSSDDVPSSKDVQPDSERARSSSRQG 95
           +VGQDLR++FSGAVEAFARRN   HG+     +H  SDD  +SK+VQ  SE+ R+     
Sbjct: 326 IVGQDLRERFSGAVEAFARRNVPSHGI---RPKHIFSDD--ASKEVQV-SEKTRNE---- 385

Query: 96  SASKRPILSSSRPSSSGEPSELRSSRLFSSSSRLSASTQRVEPKSSFLRSSVTKGSHDDA 155
            A+K  ++SSS+P SSGE SE RSS+LFSSS+      Q+++P      S+  +   DD 
Sbjct: 386 IATKMAVMSSSQPGSSGELSENRSSKLFSSSA------QKIQPVQETKLSA--RLGRDDG 442

Query: 156 LRSFELLSIGTGKKK 171
           LRSF++L+IG+GK+K
Sbjct: 446 LRSFDMLTIGSGKRK 442

[Close]

BLAST of Carg10972 vs. TAIR 10
Match: AT5G44100.1 (casein kinase I-like 7 )

HSP 1 Score: 76.3 bits (186), Expect = 2.7e-14
Identity = 68/139 (48.92%), Postives = 86/139 (61.87%), Query Frame = 0


Query: 42  RDKFSGAVEAFARRNGTGHGLHSDHSRHRSSDDVPSSKDVQPDSERARSSSRQGSASKRP 101
           R K  GAVEAF+RR+ T      D SR R+SDD P SK    DSERA SSSR  ++S R 
Sbjct: 336 RYKIPGAVEAFSRRHPTTTSSPRDRSRSRNSDDGPFSKQTHGDSERANSSSRYRASSSRK 395

Query: 102 IL--SSSRPSSSGEPSELR-SSRLFSSS--------SRLSASTQRV----EPKS-SFLRS 161
            +  SSSRPSS+G PSE R SSRL SSS        +   +++QRV    E K+ SF R+
Sbjct: 396 AVAASSSRPSSAGGPSESRTSSRLVSSSGGGGSGSGNGRPSTSQRVQAGYESKTLSFSRA 455

Query: 162 SVTKGSHDDALRSFELLSI 165
           +  + + +D LRSFELLS+
Sbjct: 456 TAARNTREDQLRSFELLSL 474

The following BLAST results are available for this feature:

BLAST of Carg10972 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7026162.1	8.4e-82	100.00	Casein kinase 1-like protein 11, partial [Cucurbita argyrosperma subsp. argyrosp...	[more]
XP_022964246.1	2.4e-60	100.00	casein kinase 1-like protein 10 isoform X2 [Cucurbita moschata]	[more]
XP_023000502.1	2.4e-60	100.00	casein kinase 1-like protein 10 isoform X2 [Cucurbita maxima]	[more]
XP_023000500.1	2.4e-60	100.00	casein kinase 1-like protein 10 isoform X1 [Cucurbita maxima] >XP_023000501.1 ca...	[more]
XP_022964243.1	2.4e-60	100.00	casein kinase 1-like protein 10 isoform X1 [Cucurbita moschata] >XP_022964244.1 ...	[more]

BLAST of Carg10972 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q39050	5.7e-25	55.56	Casein kinase 1-like protein 11 OS=Arabidopsis thaliana OX=3702 GN=CKL11 PE=1 SV...	[more]
Q8LPJ1	4.4e-17	49.65	Casein kinase 1-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=CKL6 PE=1 SV=1	[more]
Q9LSX4	7.5e-17	45.27	Casein kinase 1-like protein 8 OS=Arabidopsis thaliana OX=3702 GN=CKL8 PE=2 SV=1	[more]
Q9LW62	3.7e-16	48.89	Casein kinase 1-like protein 10 OS=Arabidopsis thaliana OX=3702 GN=CKL10 PE=2 SV...	[more]
Q9FFH8	3.8e-13	48.92	Casein kinase 1-like protein 7 OS=Arabidopsis thaliana OX=3702 GN=CKL7 PE=2 SV=1	[more]

BLAST of Carg10972 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KII8	1.1e-60	100.00	casein kinase 1-like protein 10 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A6J1HKA3	1.1e-60	100.00	casein kinase 1-like protein 10 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A6J1KDT6	1.1e-60	100.00	casein kinase 1-like protein 10 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A6J1HID5	1.1e-60	100.00	casein kinase 1-like protein 10 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A0A0LII2	4.7e-54	90.65	Protein kinase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G174...	[more]

BLAST of Carg10972 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G14340.1	4.1e-26	55.56	casein kinase I	[more]
AT4G28540.1	3.1e-18	49.65	casein kinase I-like 6	[more]
AT5G43320.1	5.3e-18	45.27	casein kinase I-like 8	[more]
AT3G23340.1	2.6e-17	48.89	casein kinase I-like 10	[more]
AT5G44100.1	2.7e-14	48.92	casein kinase I-like 7	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 56..151
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 88..148
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 59..87
None	No IPR available	PANTHER	PTHR11909	CASEIN KINASE-RELATED	coord: 42..155
None	No IPR available	PANTHER	PTHR11909:SF351	CASEIN KINASE I-LIKE	coord: 42..155

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg10972-RA	Carg10972-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006897	endocytosis
biological_process	GO:0018105	peptidyl-serine phosphorylation
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0004674	protein serine/threonine kinase activity