Carg10959 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg10959
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	RING-H2 finger protein ATL16-like
Location	Carg_Chr08: 6432507 .. 6433421 (+)
RNA-Seq Expression	Carg10959
Synteny	Carg10959

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCCGAAATCCTCATCGGTCCGTCGTTTGGTTCGCTTCATTCTTCCACCTATGTTTCCAGTTTTCCGATCATCGCCGTTGCCGTCGTCGTATTCTGCGCCACCGCAATTTTCCTCGTCGGCTATTATATCTTCGCCATCAGAGGCTGTTTCAACTGGCACCCAATTGAAATCCTCCACCAGTTTTCCCTCTCCGACAGCCGTGAAGACACCGTAATACTGCAGGAGCCGGTGGAGCCACATGGGTTGGACCCATTAACCATCCAATCAATCCCACTGATTCGTTACAAAAAACCCACCAACGAATCAACCGCCGGCAGCGAATGCGCCGTTTGCCTGATGGAATTTCAGCCGGAGGAGGAATTGAGAAAGATTCCGATCTGCAGCCATCTCTTTCACGTTGATTGCATCGACATTTGGTTTCAGAACAATTCTAACTGCCCACTTTGCAGAGCCACAATCTCCGCCAAAAATTGGCTGATTCCGGCAGATCAACCCCCTTCCCCTCAAGATTCCGCCCCCAATTTCATCCCCATCGCCGCCGCCATTGAGGAATTCCCTGTAATTGAGGTTGTTCGGAATCCCAACCGCAGCCGCCCTCATTCGTCGATCTTCAGGGAGGCGTCGAAATCAGGGAGGAAGCTAACGAAGGTAACGAGTATGGGGGATGAGTGCATTGACATGAGGAAGAAAGATGAGGAGTTTTTTCTAATGCAGCCGATTAGAAGGTCGTTTTCGATGGATTCTTCCAGCAACCGGAAGATGTTTGTGGTGGTGCAGGCGGCGGTGCGGCAGAATTGCGGCGGTGAGAATGAGATTGAAGGTTGCAGTAACAGAATTCGAAGATCTTTCTTCTCGTTTGGAAAGGGCAAAGGATCTAGAAATGCAATTTTGCCCATTCAGATTCAACCTTAA

mRNA sequence

ATGCCCGAAATCCTCATCGGTCCGTCGTTTGGTTCGCTTCATTCTTCCACCTATGTTTCCAGTTTTCCGATCATCGCCGTTGCCGTCGTCGTATTCTGCGCCACCGCAATTTTCCTCGTCGGCTATTATATCTTCGCCATCAGAGGCTGTTTCAACTGGCACCCAATTGAAATCCTCCACCAGTTTTCCCTCTCCGACAGCCGTGAAGACACCGTAATACTGCAGGAGCCGGTGGAGCCACATGGGTTGGACCCATTAACCATCCAATCAATCCCACTGATTCGTTACAAAAAACCCACCAACGAATCAACCGCCGGCAGCGAATGCGCCGTTTGCCTGATGGAATTTCAGCCGGAGGAGGAATTGAGAAAGATTCCGATCTGCAGCCATCTCTTTCACGTTGATTGCATCGACATTTGGTTTCAGAACAATTCTAACTGCCCACTTTGCAGAGCCACAATCTCCGCCAAAAATTGGCTGATTCCGGCAGATCAACCCCCTTCCCCTCAAGATTCCGCCCCCAATTTCATCCCCATCGCCGCCGCCATTGAGGAATTCCCTGTAATTGAGGTTGTTCGGAATCCCAACCGCAGCCGCCCTCATTCGTCGATCTTCAGGGAGGCGTCGAAATCAGGGAGGAAGCTAACGAAGGTAACGAGTATGGGGGATGAGTGCATTGACATGAGGAAGAAAGATGAGGAGTTTTTTCTAATGCAGCCGATTAGAAGGTCGTTTTCGATGGATTCTTCCAGCAACCGGAAGATGTTTGTGGTGGTGCAGGCGGCGGTGCGGCAGAATTGCGGCGGTGAGAATGAGATTGAAGGTTGCAGTAACAGAATTCGAAGATCTTTCTTCTCGTTTGGAAAGGGCAAAGGATCTAGAAATGCAATTTTGCCCATTCAGATTCAACCTTAA

Coding sequence (CDS)

ATGCCCGAAATCCTCATCGGTCCGTCGTTTGGTTCGCTTCATTCTTCCACCTATGTTTCCAGTTTTCCGATCATCGCCGTTGCCGTCGTCGTATTCTGCGCCACCGCAATTTTCCTCGTCGGCTATTATATCTTCGCCATCAGAGGCTGTTTCAACTGGCACCCAATTGAAATCCTCCACCAGTTTTCCCTCTCCGACAGCCGTGAAGACACCGTAATACTGCAGGAGCCGGTGGAGCCACATGGGTTGGACCCATTAACCATCCAATCAATCCCACTGATTCGTTACAAAAAACCCACCAACGAATCAACCGCCGGCAGCGAATGCGCCGTTTGCCTGATGGAATTTCAGCCGGAGGAGGAATTGAGAAAGATTCCGATCTGCAGCCATCTCTTTCACGTTGATTGCATCGACATTTGGTTTCAGAACAATTCTAACTGCCCACTTTGCAGAGCCACAATCTCCGCCAAAAATTGGCTGATTCCGGCAGATCAACCCCCTTCCCCTCAAGATTCCGCCCCCAATTTCATCCCCATCGCCGCCGCCATTGAGGAATTCCCTGTAATTGAGGTTGTTCGGAATCCCAACCGCAGCCGCCCTCATTCGTCGATCTTCAGGGAGGCGTCGAAATCAGGGAGGAAGCTAACGAAGGTAACGAGTATGGGGGATGAGTGCATTGACATGAGGAAGAAAGATGAGGAGTTTTTTCTAATGCAGCCGATTAGAAGGTCGTTTTCGATGGATTCTTCCAGCAACCGGAAGATGTTTGTGGTGGTGCAGGCGGCGGTGCGGCAGAATTGCGGCGGTGAGAATGAGATTGAAGGTTGCAGTAACAGAATTCGAAGATCTTTCTTCTCGTTTGGAAAGGGCAAAGGATCTAGAAATGCAATTTTGCCCATTCAGATTCAACCTTAA

Protein sequence

MPEILIGPSFGSLHSSTYVSSFPIIAVAVVVFCATAIFLVGYYIFAIRGCFNWHPIEILHQFSLSDSREDTVILQEPVEPHGLDPLTIQSIPLIRYKKPTNESTAGSECAVCLMEFQPEEELRKIPICSHLFHVDCIDIWFQNNSNCPLCRATISAKNWLIPADQPPSPQDSAPNFIPIAAAIEEFPVIEVVRNPNRSRPHSSIFREASKSGRKLTKVTSMGDECIDMRKKDEEFFLMQPIRRSFSMDSSSNRKMFVVVQAAVRQNCGGENEIEGCSNRIRRSFFSFGKGKGSRNAILPIQIQP

Homology

[Close]

BLAST of Carg10959 vs. NCBI nr
Match: XP_022930409.1 (RING-H2 finger protein ATL16-like [Cucurbita moschata] >XP_023514893.1 RING-H2 finger protein ATL16-like [Cucurbita pepo subsp. pepo] >KAG7026174.1 RING-H2 finger protein ATL16, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 617.8 bits (1592), Expect = 4.8e-173
Identity = 304/304 (100.00%), Postives = 304/304 (100.00%), Query Frame = 0


Query: 1   MPEILIGPSFGSLHSSTYVSSFPIIAVAVVVFCATAIFLVGYYIFAIRGCFNWHPIEILH 60
           MPEILIGPSFGSLHSSTYVSSFPIIAVAVVVFCATAIFLVGYYIFAIRGCFNWHPIEILH
Sbjct: 1   MPEILIGPSFGSLHSSTYVSSFPIIAVAVVVFCATAIFLVGYYIFAIRGCFNWHPIEILH 60

Query: 61  QFSLSDSREDTVILQEPVEPHGLDPLTIQSIPLIRYKKPTNESTAGSECAVCLMEFQPEE 120
           QFSLSDSREDTVILQEPVEPHGLDPLTIQSIPLIRYKKPTNESTAGSECAVCLMEFQPEE
Sbjct: 61  QFSLSDSREDTVILQEPVEPHGLDPLTIQSIPLIRYKKPTNESTAGSECAVCLMEFQPEE 120

Query: 121 ELRKIPICSHLFHVDCIDIWFQNNSNCPLCRATISAKNWLIPADQPPSPQDSAPNFIPIA 180
           ELRKIPICSHLFHVDCIDIWFQNNSNCPLCRATISAKNWLIPADQPPSPQDSAPNFIPIA
Sbjct: 121 ELRKIPICSHLFHVDCIDIWFQNNSNCPLCRATISAKNWLIPADQPPSPQDSAPNFIPIA 180

Query: 181 AAIEEFPVIEVVRNPNRSRPHSSIFREASKSGRKLTKVTSMGDECIDMRKKDEEFFLMQP 240
           AAIEEFPVIEVVRNPNRSRPHSSIFREASKSGRKLTKVTSMGDECIDMRKKDEEFFLMQP
Sbjct: 181 AAIEEFPVIEVVRNPNRSRPHSSIFREASKSGRKLTKVTSMGDECIDMRKKDEEFFLMQP 240

Query: 241 IRRSFSMDSSSNRKMFVVVQAAVRQNCGGENEIEGCSNRIRRSFFSFGKGKGSRNAILPI 300
           IRRSFSMDSSSNRKMFVVVQAAVRQNCGGENEIEGCSNRIRRSFFSFGKGKGSRNAILPI
Sbjct: 241 IRRSFSMDSSSNRKMFVVVQAAVRQNCGGENEIEGCSNRIRRSFFSFGKGKGSRNAILPI 300

Query: 301 QIQP 305
           QIQP
Sbjct: 301 QIQP 304

[Close]

BLAST of Carg10959 vs. NCBI nr
Match: KAG6593842.1 (RING-H2 finger protein ATL16, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 608.6 bits (1568), Expect = 2.9e-170
Identity = 302/308 (98.05%), Postives = 304/308 (98.70%), Query Frame = 0


Query: 1   MPEILIGPSFGSLHSSTYVSSFPIIAVAVVVFCATAIFLVGYYIFAIRGCFNWHPIEILH 60
           MPEILIGPSFGSLHSSTYVSSFPIIAVAVVVFCATAIFLVGYYIFAIRGCFNWHPIEILH
Sbjct: 1   MPEILIGPSFGSLHSSTYVSSFPIIAVAVVVFCATAIFLVGYYIFAIRGCFNWHPIEILH 60

Query: 61  QFSLSDSREDTVILQEPVEPHGLDPLTIQSIPLIRYKKPTNESTAGSECAVCLMEFQPEE 120
           QFSLSDSREDTVILQEPVEPHGLDPLTIQSIPLIRY+KPTNESTAGSECAVCLMEFQPEE
Sbjct: 61  QFSLSDSREDTVILQEPVEPHGLDPLTIQSIPLIRYRKPTNESTAGSECAVCLMEFQPEE 120

Query: 121 ELRKIPICSHLFHVDCIDIWFQNNSNCPLCRATISAKNWLIPADQPPSPQDSAPNFIPIA 180
           ELRKIPICSHLFHVDCIDIWFQNNSNCPLCRATISAKNWLIPADQPPSPQDSAPNFIPIA
Sbjct: 121 ELRKIPICSHLFHVDCIDIWFQNNSNCPLCRATISAKNWLIPADQPPSPQDSAPNFIPIA 180

Query: 181 AAIEEFPVIEVVRNPNRSRPHSSIFREASKSGRKLTKVTSMGDECIDMRKKDEEFFLMQP 240
           AAIEEFPVIEVVRNPNRSRP+SSIFREASKSGRKLTKVTSMGDECIDMRKKDEEFFLMQP
Sbjct: 181 AAIEEFPVIEVVRNPNRSRPYSSIFREASKSGRKLTKVTSMGDECIDMRKKDEEFFLMQP 240

Query: 241 IRRSFSMDSSSNRKMFVV----VQAAVRQNCGGENEIEGCSNRIRRSFFSFGKGKGSRNA 300
           IRRSFSMDSSSNRKMFVV    VQAAVRQNCGGENEIEGCSNRIRRSFFSFGKGKGSRNA
Sbjct: 241 IRRSFSMDSSSNRKMFVVVQAAVQAAVRQNCGGENEIEGCSNRIRRSFFSFGKGKGSRNA 300

Query: 301 ILPIQIQP 305
           ILPIQIQP
Sbjct: 301 ILPIQIQP 308

[Close]

BLAST of Carg10959 vs. NCBI nr
Match: XP_023000529.1 (RING-H2 finger protein ATL16-like [Cucurbita maxima])

HSP 1 Score: 583.9 bits (1504), Expect = 7.7e-163
Identity = 290/304 (95.39%), Postives = 294/304 (96.71%), Query Frame = 0


Query: 1   MPEILIGPSFGSLHSSTYVSSFPIIAVAVVVFCATAIFLVGYYIFAIRGCFNWHPIEILH 60
           MPEILIGPSFGSLHSSTYVSSFPIIAVAVVVFCATAIFLVGYYIFAI+GCFNWHPIEILH
Sbjct: 1   MPEILIGPSFGSLHSSTYVSSFPIIAVAVVVFCATAIFLVGYYIFAIKGCFNWHPIEILH 60

Query: 61  QFSLSDSREDTVILQEPVEPHGLDPLTIQSIPLIRYKKPTNESTAGSECAVCLMEFQPEE 120
           QFSLSDSREDTVILQEPVEP GLDPLTIQSIPLIRYKKPTNE+TAG ECAVCLMEFQPEE
Sbjct: 61  QFSLSDSREDTVILQEPVEPRGLDPLTIQSIPLIRYKKPTNETTAGRECAVCLMEFQPEE 120

Query: 121 ELRKIPICSHLFHVDCIDIWFQNNSNCPLCRATISAKNWLIPADQPPSPQDSAPNFIPIA 180
           ELRKIPICSHLFHVDCIDIWFQNNSNCPLCRATISAKNWLIPADQPPSP+DS PNFIPIA
Sbjct: 121 ELRKIPICSHLFHVDCIDIWFQNNSNCPLCRATISAKNWLIPADQPPSPRDSTPNFIPIA 180

Query: 181 AAIEEFPVIEVVRNPNRSRPHSSIFREASKSGRKLTKVTSMGDECIDMRKKDEEFFLMQP 240
           AA EEFPVIEVVRNPNRSRPHSSIFREA KSG KLTKVTSMGDECIDMRKKDEE FLMQP
Sbjct: 181 AANEEFPVIEVVRNPNRSRPHSSIFREAPKSGSKLTKVTSMGDECIDMRKKDEE-FLMQP 240

Query: 241 IRRSFSMDSSSNRKMFVVVQAAVRQNCGGENEIEGCSNRIRRSFFSFGKGKGSRNAILPI 300
           IRRSFSMDSSSNRKM+VVVQA VRQN GGENEIEGCSNRIRRSFFSFGK KGSRNAILPI
Sbjct: 241 IRRSFSMDSSSNRKMYVVVQAVVRQNGGGENEIEGCSNRIRRSFFSFGKSKGSRNAILPI 300

Query: 301 QIQP 305
           QIQP
Sbjct: 301 QIQP 303

[Close]

BLAST of Carg10959 vs. NCBI nr
Match: XP_038875603.1 (RING-H2 finger protein ATL16-like [Benincasa hispida])

HSP 1 Score: 406.0 bits (1042), Expect = 2.9e-109
Identity = 207/307 (67.43%), Postives = 242/307 (78.83%), Query Frame = 0


Query: 1   MPEILIGPSFGSLHSSTYVSSFPIIAVAVVVFCATAIFLVGYYIFAIRGCFNWHPIEILH 60
           M + LI PS   LHSS  VSSFPIIAVAV+  CATA  LV YY+F I+ C NW  IEIL 
Sbjct: 1   MAQTLISPSTSPLHSSNPVSSFPIIAVAVIGICATAFLLVTYYVFVIKCCLNWQRIEILR 60

Query: 61  QFSLSDSREDTVILQEPVEPHGLDPLTIQSIPLIRYKKPTNESTAGSECAVCLMEFQPEE 120
           +FSLS  RE+T+IL++P EP GLDP TIQSIPLI YKKP NE+T+G ECAVCL EFQ EE
Sbjct: 61  RFSLSRRREETLILRQPAEPRGLDPSTIQSIPLISYKKPINETTSGGECAVCLTEFQTEE 120

Query: 121 ELRKIPICSHLFHVDCIDIWFQNNSNCPLCRATISAKNWLIPADQPPSPQDSAPNF-IPI 180
           +LRKIPICSHLFH+DCIDIW QNNSNCPLCR +ISA+NWLIP DQ PSPQD   N    I
Sbjct: 121 QLRKIPICSHLFHIDCIDIWLQNNSNCPLCRTSISAQNWLIPTDQAPSPQDLGLNTGSHI 180

Query: 181 AAAIEEFPVIEVVRNPNRSRPHSSIFREASKSGRKLTKVTSMGDECIDMRKKDEEFFLMQ 240
           + A E F VIE+ RN +R R  +    EA++SGRK  KVTSMGDECIDMR+KDEE F++Q
Sbjct: 181 SVADENFVVIELGRNLDRRRHPALGSSEAAESGRKFKKVTSMGDECIDMREKDEE-FIVQ 240

Query: 241 PIRRSFSMDSSSNRKMFVVVQAAVRQNCGGEN--EIEGCSNRIRRSFFSFGKGKGSRNAI 300
           PIRRSFSMDSS +R++++ VQAAVR+   GEN  E+EGCS+R+RRSFFSFG G+GSRNA+
Sbjct: 241 PIRRSFSMDSSGDRQLYMAVQAAVREKGDGENGVEVEGCSSRVRRSFFSFGSGRGSRNAV 300

Query: 301 LPIQIQP 305
           LPIQ QP
Sbjct: 301 LPIQFQP 306

[Close]

BLAST of Carg10959 vs. NCBI nr
Match: XP_008460634.1 (PREDICTED: RING-H2 finger protein ATL16 [Cucumis melo] >KAA0065677.1 RING-H2 finger protein ATL16 [Cucumis melo var. makuwa] >TYK08225.1 RING-H2 finger protein ATL16 [Cucumis melo var. makuwa])

HSP 1 Score: 398.7 bits (1023), Expect = 4.6e-107
Identity = 203/307 (66.12%), Postives = 238/307 (77.52%), Query Frame = 0


Query: 1   MPEILIGPSFGSLHSSTYVSSFPIIAVAVVVFCATAIFLVGYYIFAIRGCFNWHPIEILH 60
           M + LI PS   LHSS  VSSFPIIAVAV+  CATA  LV YYIF I+ C NW  IEIL 
Sbjct: 1   MAQPLISPSTSPLHSSNPVSSFPIIAVAVIGICATAFLLVSYYIFVIKCCLNWQRIEILR 60

Query: 61  QFSLSDSREDTVILQEPVEPHGLDPLTIQSIPLIRYKKPTNESTAGSECAVCLMEFQPEE 120
           +FSLS  REDT+IL++  EP GLDP  IQSIPLI YKKP  E+T G ECAVCL EFQ EE
Sbjct: 61  RFSLSRRREDTLILRQQAEPRGLDPSIIQSIPLINYKKPIGETTTGGECAVCLTEFQTEE 120

Query: 121 ELRKIPICSHLFHVDCIDIWFQNNSNCPLCRATISAKNWLIPADQPPSPQDSAPNF-IPI 180
           +LRKIPICSHLFH+DCIDIW QNNSNCPLCR +IS +NWLIP DQ PS +D A N  IPI
Sbjct: 121 QLRKIPICSHLFHIDCIDIWLQNNSNCPLCRTSISNQNWLIPTDQAPSRRDLALNTGIPI 180

Query: 181 AAAIEEFPVIEVVRNPNRSRPHSSIFREASKSGRKLTKVTSMGDECIDMRKKDEEFFLMQ 240
           +A  E F VIE+  N +R +P   +  E +KS RK  KVTSMGDECI+MR+KDEE F++Q
Sbjct: 181 SAGDENFVVIELGGNLDRRQPPGLVSGEVAKSERKFKKVTSMGDECINMREKDEE-FIVQ 240

Query: 241 PIRRSFSMDSSSNRKMFVVVQAAVRQNCGGEN--EIEGCSNRIRRSFFSFGKGKGSRNAI 300
           PIRRSFSMDSS +R++++ VQAAVR+  GGEN  E+EGCS+R++RSFFSFG G+GSRNA+
Sbjct: 241 PIRRSFSMDSSGDRQLYMAVQAAVREKSGGENGVEVEGCSSRVKRSFFSFGSGRGSRNAV 300

Query: 301 LPIQIQP 305
           LPIQ QP
Sbjct: 301 LPIQFQP 306

[Close]

BLAST of Carg10959 vs. ExPASy Swiss-Prot
Match: Q9LSW9 (RING-H2 finger protein ATL16 OS=Arabidopsis thaliana OX=3702 GN=ATL16 PE=2 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 2.0e-57
Identity = 141/351 (40.17%), Postives = 201/351 (57.26%), Query Frame = 0


Query: 15  SSTYVSSFPIIAVAVVVFCATAIFLVGYYIFAIRGCFNWHPIEILHQFSLSDSR---EDT 74
           +S+  +SFPI+AVAV+   ATA  LV YY+F I+ C NWH I+IL +FSLS  R   +D 
Sbjct: 27  ASSTGTSFPILAVAVIGILATAFLLVSYYVFVIKCCLNWHRIDILGRFSLSRRRRNDQDP 86

Query: 75  VILQEP-VEPHGLDPLTIQSIPLIRYKK-------------PTNESTAGSECAVCLMEFQ 134
           +++  P +   GLD   I++IP+ ++KK                E     EC+VCL EFQ
Sbjct: 87  LMVYSPELRSRGLDESVIRAIPIFKFKKRYDQNDGVFTGEGEEEEEKRSQECSVCLSEFQ 146

Query: 135 PEEELRKIPICSHLFHVDCIDIWFQNNSNCPLCRATISAKNWLIPADQPPSPQDSAPNFI 194
            EE+LR IP CSHLFH+DCID+W QNN+NCPLCR  +S  +   P D+  +P  S  N +
Sbjct: 147 DEEKLRIIPNCSHLFHIDCIDVWLQNNANCPLCRTRVSC-DTSFPPDRVSAPSTSPENLV 206

Query: 195 PIAAAIEEFPVIEV---VRNPNRSRPHSSIF--REASKSG-------------------- 254
            +     E+ VIE+   + +   S  H  +   +E S SG                    
Sbjct: 207 MLRGE-NEYVVIELGSSIGSDRDSPRHGRLLTGQERSNSGYLLNENTQNSISPSPKKLDR 266

Query: 255 -------RKLTKVTSMGDECIDMRK-KDEEFFLMQPIRRSFSMDSSSNRKMFVVVQAAVR 305
                  RKL K+TSMGDECID+R+ KDE+F  +QPIRRS SMDSS++R++++ VQ A+R
Sbjct: 267 GGLPRKFRKLHKMTSMGDECIDIRRGKDEQFGSIQPIRRSISMDSSADRQLYLAVQEAIR 326

[Close]

BLAST of Carg10959 vs. ExPASy Swiss-Prot
Match: P93823 (RING-H2 finger protein ATL1 OS=Arabidopsis thaliana OX=3702 GN=ATL1 PE=2 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 3.2e-50
Identity = 134/348 (38.51%), Postives = 187/348 (53.74%), Query Frame = 0


Query: 15  SSTYVSSFPIIAVAVVVFCATAIFLVGYYIFAIRGCFNWHPIEILHQFSLSDSREDTVIL 74
           +S+  ++FPI+A+AV+   ATA  LV YYIF I+ C NWH I+I  +   S  +   +I 
Sbjct: 34  TSSSGTNFPILAIAVIGILATAFLLVSYYIFVIKCCLNWHQIDIFRRRRRSSDQNPLMIY 93

Query: 75  QEPVEPHGLDPLTIQSIPLIRYKK------PTNESTAGSECAVCLMEFQPEEELRKIPIC 134
                  GLD   I++IP+ ++KK        ++S    EC+VCL EFQ +E+LR IP C
Sbjct: 94  SPHEVNRGLDESAIRAIPVFKFKKRDVVAGEEDQSKNSQECSVCLNEFQEDEKLRIIPNC 153

Query: 135 SHLFHVDCIDIWFQNNSNCPLCRATIS--AKNWLIPADQPPSPQDSAP-----NFIP--I 194
            H+FH+DCIDIW Q N+NCPLCR ++S  A   L     P SP++++P     N  P  +
Sbjct: 154 CHVFHIDCIDIWLQGNANCPLCRTSVSCEASFTLDLISAPSSPRENSPHSRNRNLEPGLV 213

Query: 195 AAAIEEFPVIEV----------VRN--------------------PNRSRPHSSIF--RE 254
               ++F VIE+          VRN                    P    P    F  R 
Sbjct: 214 LGGDDDFVVIELGASNGNNRESVRNIDFLTEQERVTSNEVSTGNSPKSVSPLPIKFGNRG 273

Query: 255 ASKSGRKLTKVTSMGDECIDMRKKDEEFFLMQPIRRSFSMDSSSNRKMFVVVQAAV-RQN 305
             K  RK  KVTSMGDECID R KD  F  +QPIRRS SMDSS +R++++ VQ  + R+N
Sbjct: 274 MYKKERKFHKVTSMGDECIDTRGKDGHFGEIQPIRRSISMDSSVDRQLYLAVQEEISRRN 333

[Close]

BLAST of Carg10959 vs. ExPASy Swiss-Prot
Match: Q9LF64 (RING-H2 finger protein ATL52 OS=Arabidopsis thaliana OX=3702 GN=ATL52 PE=2 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 8.4e-19
Identity = 51/146 (34.93%), Postives = 81/146 (55.48%), Query Frame = 0


Query: 15  SSTYVSSFPIIAVAVVVFCATAIFLVGYYIFAIRGCFNWHPIEILHQFSLSDSREDTVIL 74
           SS+  SSF  + +A++    +A+ LV YY    + C   H        +L+ + E     
Sbjct: 47  SSSSSSSFSPLLIALIGILTSALILVSYYTLISKYCHRHHQTSSSETLNLNHNGEGFFSS 106

Query: 75  QEPVEPH--GLDPLTIQSIPLIRYKKPTNESTAGSECAVCLMEFQPEEELRKIPICSHLF 134
            + +  +  GL+   I+SI + +YK   +    GS+C+VCL EF+  E LR +P C+H F
Sbjct: 107 TQRISTNGDGLNESMIKSITVYKYKS-GDGFVDGSDCSVCLSEFEENESLRLLPKCNHAF 166

Query: 135 HVDCIDIWFQNNSNCPLCRATISAKN 159
           H+ CID W +++SNCPLCRA ++  N
Sbjct: 167 HLPCIDTWLKSHSNCPLCRAFVTGVN 191

[Close]

BLAST of Carg10959 vs. ExPASy Swiss-Prot
Match: Q9LZJ6 (RING-H2 finger protein ATL5 OS=Arabidopsis thaliana OX=3702 GN=ATL5 PE=2 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 2.1e-17
Identity = 65/200 (32.50%), Postives = 99/200 (49.50%), Query Frame = 0


Query: 15  SSTYVSSFPIIAVAVVVFCATAIFLVGYYIFAIRGCFNWHPIEI-----LHQFSLSDSRE 74
           SS Y  +  I+  +V++     I ++ ++ +A R  F      I      H  SL+ +R+
Sbjct: 19  SSRYSLNGKIMLASVIILFVAVILILCFHSYA-RWLFRRQNRRIRRRISAHLRSLAAARD 78

Query: 75  DTVILQEPVEPHGLDPLTIQSIPLIRYKKPTNESTAGSECAVCLMEFQPEEELRKIPICS 134
            T   Q       LDP  ++ IP+  Y   T+ES    EC+VCL EF+ ++E R +P C 
Sbjct: 79  PT---QSSSSLSPLDPTVLEKIPIFVYSVKTHESPL-EECSVCLSEFEEDDEGRVLPKCG 138

Query: 135 HLFHVDCIDIWFQNNSNCPLCRATISAKNWLIPADQPPSPQDSAPNFIPIAAAIEEFPVI 194
           H+FHVDCID WF++ S+CPLCRA +       PA     P+       P+AA    FP +
Sbjct: 139 HVFHVDCIDTWFRSRSSCPLCRAPVQ------PAQPVTEPE-------PVAAV---FPSV 197

Query: 195 EVVRNPNRSRPHSSIFREAS 210
           + + +       SS   E+S
Sbjct: 199 KPIEDTEAGSSSSSDESESS 197

[Close]

BLAST of Carg10959 vs. ExPASy Swiss-Prot
Match: Q8GW38 (RING-H2 finger protein ATL47 OS=Arabidopsis thaliana OX=3702 GN=ATL47 PE=2 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 2.7e-17
Identity = 56/138 (40.58%), Postives = 75/138 (54.35%), Query Frame = 0


Query: 22  FPIIAVAVVVF-CATAIFLVGYYIFAIRGCFNWHPIEILHQFSLSDSREDTVILQEPVEP 81
           F I+ ++V+ F C+    LV YY+   R   +  P E       SDS      LQ+    
Sbjct: 55  FIIVLLSVIFFICSILHLLVRYYLKKKRSNLSSSPNESNQNPEFSDSDTYQRQLQQLFHL 114

Query: 82  H--GLDPLTIQSIPLIRYK--KPTNESTAGSECAVCLMEFQPEEELRKIPICSHLFHVDC 141
           H  GLD   I ++P+  YK  K T E     +CAVCL EF  +++LR +P CSH FH+DC
Sbjct: 115 HDSGLDQALIDALPVFLYKEIKGTKEP---FDCAVCLCEFSEDDKLRLLPNCSHAFHIDC 174

Query: 142 IDIWFQNNSNCPLCRATI 155
           ID W  +NS CPLCR T+
Sbjct: 175 IDTWLLSNSTCPLCRGTL 189

[Close]

BLAST of Carg10959 vs. ExPASy TrEMBL
Match: A0A6J1ERC0 (RING-H2 finger protein ATL16-like OS=Cucurbita moschata OX=3662 GN=LOC111436863 PE=4 SV=1)

HSP 1 Score: 617.8 bits (1592), Expect = 2.3e-173
Identity = 304/304 (100.00%), Postives = 304/304 (100.00%), Query Frame = 0


Query: 1   MPEILIGPSFGSLHSSTYVSSFPIIAVAVVVFCATAIFLVGYYIFAIRGCFNWHPIEILH 60
           MPEILIGPSFGSLHSSTYVSSFPIIAVAVVVFCATAIFLVGYYIFAIRGCFNWHPIEILH
Sbjct: 1   MPEILIGPSFGSLHSSTYVSSFPIIAVAVVVFCATAIFLVGYYIFAIRGCFNWHPIEILH 60

Query: 61  QFSLSDSREDTVILQEPVEPHGLDPLTIQSIPLIRYKKPTNESTAGSECAVCLMEFQPEE 120
           QFSLSDSREDTVILQEPVEPHGLDPLTIQSIPLIRYKKPTNESTAGSECAVCLMEFQPEE
Sbjct: 61  QFSLSDSREDTVILQEPVEPHGLDPLTIQSIPLIRYKKPTNESTAGSECAVCLMEFQPEE 120

Query: 121 ELRKIPICSHLFHVDCIDIWFQNNSNCPLCRATISAKNWLIPADQPPSPQDSAPNFIPIA 180
           ELRKIPICSHLFHVDCIDIWFQNNSNCPLCRATISAKNWLIPADQPPSPQDSAPNFIPIA
Sbjct: 121 ELRKIPICSHLFHVDCIDIWFQNNSNCPLCRATISAKNWLIPADQPPSPQDSAPNFIPIA 180

Query: 181 AAIEEFPVIEVVRNPNRSRPHSSIFREASKSGRKLTKVTSMGDECIDMRKKDEEFFLMQP 240
           AAIEEFPVIEVVRNPNRSRPHSSIFREASKSGRKLTKVTSMGDECIDMRKKDEEFFLMQP
Sbjct: 181 AAIEEFPVIEVVRNPNRSRPHSSIFREASKSGRKLTKVTSMGDECIDMRKKDEEFFLMQP 240

Query: 241 IRRSFSMDSSSNRKMFVVVQAAVRQNCGGENEIEGCSNRIRRSFFSFGKGKGSRNAILPI 300
           IRRSFSMDSSSNRKMFVVVQAAVRQNCGGENEIEGCSNRIRRSFFSFGKGKGSRNAILPI
Sbjct: 241 IRRSFSMDSSSNRKMFVVVQAAVRQNCGGENEIEGCSNRIRRSFFSFGKGKGSRNAILPI 300

Query: 301 QIQP 305
           QIQP
Sbjct: 301 QIQP 304

[Close]

BLAST of Carg10959 vs. ExPASy TrEMBL
Match: A0A6J1KK90 (RING-H2 finger protein ATL16-like OS=Cucurbita maxima OX=3661 GN=LOC111494770 PE=4 SV=1)

HSP 1 Score: 583.9 bits (1504), Expect = 3.7e-163
Identity = 290/304 (95.39%), Postives = 294/304 (96.71%), Query Frame = 0


Query: 1   MPEILIGPSFGSLHSSTYVSSFPIIAVAVVVFCATAIFLVGYYIFAIRGCFNWHPIEILH 60
           MPEILIGPSFGSLHSSTYVSSFPIIAVAVVVFCATAIFLVGYYIFAI+GCFNWHPIEILH
Sbjct: 1   MPEILIGPSFGSLHSSTYVSSFPIIAVAVVVFCATAIFLVGYYIFAIKGCFNWHPIEILH 60

Query: 61  QFSLSDSREDTVILQEPVEPHGLDPLTIQSIPLIRYKKPTNESTAGSECAVCLMEFQPEE 120
           QFSLSDSREDTVILQEPVEP GLDPLTIQSIPLIRYKKPTNE+TAG ECAVCLMEFQPEE
Sbjct: 61  QFSLSDSREDTVILQEPVEPRGLDPLTIQSIPLIRYKKPTNETTAGRECAVCLMEFQPEE 120

Query: 121 ELRKIPICSHLFHVDCIDIWFQNNSNCPLCRATISAKNWLIPADQPPSPQDSAPNFIPIA 180
           ELRKIPICSHLFHVDCIDIWFQNNSNCPLCRATISAKNWLIPADQPPSP+DS PNFIPIA
Sbjct: 121 ELRKIPICSHLFHVDCIDIWFQNNSNCPLCRATISAKNWLIPADQPPSPRDSTPNFIPIA 180

Query: 181 AAIEEFPVIEVVRNPNRSRPHSSIFREASKSGRKLTKVTSMGDECIDMRKKDEEFFLMQP 240
           AA EEFPVIEVVRNPNRSRPHSSIFREA KSG KLTKVTSMGDECIDMRKKDEE FLMQP
Sbjct: 181 AANEEFPVIEVVRNPNRSRPHSSIFREAPKSGSKLTKVTSMGDECIDMRKKDEE-FLMQP 240

Query: 241 IRRSFSMDSSSNRKMFVVVQAAVRQNCGGENEIEGCSNRIRRSFFSFGKGKGSRNAILPI 300
           IRRSFSMDSSSNRKM+VVVQA VRQN GGENEIEGCSNRIRRSFFSFGK KGSRNAILPI
Sbjct: 241 IRRSFSMDSSSNRKMYVVVQAVVRQNGGGENEIEGCSNRIRRSFFSFGKSKGSRNAILPI 300

Query: 301 QIQP 305
           QIQP
Sbjct: 301 QIQP 303

[Close]

BLAST of Carg10959 vs. ExPASy TrEMBL
Match: A0A5A7VEZ8 (RING-H2 finger protein ATL16 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1503G00490 PE=4 SV=1)

HSP 1 Score: 398.7 bits (1023), Expect = 2.2e-107
Identity = 203/307 (66.12%), Postives = 238/307 (77.52%), Query Frame = 0


Query: 1   MPEILIGPSFGSLHSSTYVSSFPIIAVAVVVFCATAIFLVGYYIFAIRGCFNWHPIEILH 60
           M + LI PS   LHSS  VSSFPIIAVAV+  CATA  LV YYIF I+ C NW  IEIL 
Sbjct: 1   MAQPLISPSTSPLHSSNPVSSFPIIAVAVIGICATAFLLVSYYIFVIKCCLNWQRIEILR 60

Query: 61  QFSLSDSREDTVILQEPVEPHGLDPLTIQSIPLIRYKKPTNESTAGSECAVCLMEFQPEE 120
           +FSLS  REDT+IL++  EP GLDP  IQSIPLI YKKP  E+T G ECAVCL EFQ EE
Sbjct: 61  RFSLSRRREDTLILRQQAEPRGLDPSIIQSIPLINYKKPIGETTTGGECAVCLTEFQTEE 120

Query: 121 ELRKIPICSHLFHVDCIDIWFQNNSNCPLCRATISAKNWLIPADQPPSPQDSAPNF-IPI 180
           +LRKIPICSHLFH+DCIDIW QNNSNCPLCR +IS +NWLIP DQ PS +D A N  IPI
Sbjct: 121 QLRKIPICSHLFHIDCIDIWLQNNSNCPLCRTSISNQNWLIPTDQAPSRRDLALNTGIPI 180

Query: 181 AAAIEEFPVIEVVRNPNRSRPHSSIFREASKSGRKLTKVTSMGDECIDMRKKDEEFFLMQ 240
           +A  E F VIE+  N +R +P   +  E +KS RK  KVTSMGDECI+MR+KDEE F++Q
Sbjct: 181 SAGDENFVVIELGGNLDRRQPPGLVSGEVAKSERKFKKVTSMGDECINMREKDEE-FIVQ 240

Query: 241 PIRRSFSMDSSSNRKMFVVVQAAVRQNCGGEN--EIEGCSNRIRRSFFSFGKGKGSRNAI 300
           PIRRSFSMDSS +R++++ VQAAVR+  GGEN  E+EGCS+R++RSFFSFG G+GSRNA+
Sbjct: 241 PIRRSFSMDSSGDRQLYMAVQAAVREKSGGENGVEVEGCSSRVKRSFFSFGSGRGSRNAV 300

Query: 301 LPIQIQP 305
           LPIQ QP
Sbjct: 301 LPIQFQP 306

[Close]

BLAST of Carg10959 vs. ExPASy TrEMBL
Match: A0A1S3CD01 (RING-H2 finger protein ATL16 OS=Cucumis melo OX=3656 GN=LOC103499411 PE=4 SV=1)

HSP 1 Score: 398.7 bits (1023), Expect = 2.2e-107
Identity = 203/307 (66.12%), Postives = 238/307 (77.52%), Query Frame = 0


Query: 1   MPEILIGPSFGSLHSSTYVSSFPIIAVAVVVFCATAIFLVGYYIFAIRGCFNWHPIEILH 60
           M + LI PS   LHSS  VSSFPIIAVAV+  CATA  LV YYIF I+ C NW  IEIL 
Sbjct: 1   MAQPLISPSTSPLHSSNPVSSFPIIAVAVIGICATAFLLVSYYIFVIKCCLNWQRIEILR 60

Query: 61  QFSLSDSREDTVILQEPVEPHGLDPLTIQSIPLIRYKKPTNESTAGSECAVCLMEFQPEE 120
           +FSLS  REDT+IL++  EP GLDP  IQSIPLI YKKP  E+T G ECAVCL EFQ EE
Sbjct: 61  RFSLSRRREDTLILRQQAEPRGLDPSIIQSIPLINYKKPIGETTTGGECAVCLTEFQTEE 120

Query: 121 ELRKIPICSHLFHVDCIDIWFQNNSNCPLCRATISAKNWLIPADQPPSPQDSAPNF-IPI 180
           +LRKIPICSHLFH+DCIDIW QNNSNCPLCR +IS +NWLIP DQ PS +D A N  IPI
Sbjct: 121 QLRKIPICSHLFHIDCIDIWLQNNSNCPLCRTSISNQNWLIPTDQAPSRRDLALNTGIPI 180

Query: 181 AAAIEEFPVIEVVRNPNRSRPHSSIFREASKSGRKLTKVTSMGDECIDMRKKDEEFFLMQ 240
           +A  E F VIE+  N +R +P   +  E +KS RK  KVTSMGDECI+MR+KDEE F++Q
Sbjct: 181 SAGDENFVVIELGGNLDRRQPPGLVSGEVAKSERKFKKVTSMGDECINMREKDEE-FIVQ 240

Query: 241 PIRRSFSMDSSSNRKMFVVVQAAVRQNCGGEN--EIEGCSNRIRRSFFSFGKGKGSRNAI 300
           PIRRSFSMDSS +R++++ VQAAVR+  GGEN  E+EGCS+R++RSFFSFG G+GSRNA+
Sbjct: 241 PIRRSFSMDSSGDRQLYMAVQAAVREKSGGENGVEVEGCSSRVKRSFFSFGSGRGSRNAV 300

Query: 301 LPIQIQP 305
           LPIQ QP
Sbjct: 301 LPIQFQP 306

[Close]

BLAST of Carg10959 vs. ExPASy TrEMBL
Match: A0A6J1L4L0 (RING-H2 finger protein ATL16-like OS=Cucurbita maxima OX=3661 GN=LOC111499094 PE=4 SV=1)

HSP 1 Score: 393.7 bits (1010), Expect = 7.2e-106
Identity = 202/309 (65.37%), Postives = 236/309 (76.38%), Query Frame = 0


Query: 1   MPEILIGPSFGSLHSSTYVSSFPIIAVAVVVFCATAIFLVGYYIFAIRGCFNWHPIEILH 60
           M + LI PS   LHSST VSSFPIIAVAV+  CATA  LVGYYIF I+ C NW  IEIL 
Sbjct: 1   MEKPLISPSATPLHSSTSVSSFPIIAVAVIGICATAFLLVGYYIFVIKCCLNWQRIEILR 60

Query: 61  QFSLSDSREDTVILQEPVEPHGLDPLTIQSIPLIRYKKPTNESTAGSECAVCLMEFQPEE 120
           +FSLS  RE+T+IL++P +P GLDP TIQSIPLI YKKP  E+ +G ECAVCL EF+PEE
Sbjct: 61  RFSLSRRREETLILRQPADPRGLDPSTIQSIPLINYKKPIKETASGGECAVCLTEFRPEE 120

Query: 121 ELRKIPICSHLFHVDCIDIWFQNNSNCPLCRATISAKNWLIPADQPPSPQDSAPN---FI 180
           +LRKIPICSHLFH+DCIDIW QNN NCPLCR +ISA+NWLIP DQ PSP+D A N    +
Sbjct: 121 QLRKIPICSHLFHIDCIDIWLQNNPNCPLCRTSISAQNWLIPVDQAPSPRDLALNSGSSV 180

Query: 181 PIAAAIEEFPVIEVVRNPNRSRPHSSIFREASKSGRKLTKVTSMGDECIDMRKKDEEFFL 240
               A E F VIE+ RNP+R RP                KVTSMGDECIDMR+KD+E FL
Sbjct: 181 DATTADENFVVIELGRNPDRRRP------------PPFGKVTSMGDECIDMREKDKE-FL 240

Query: 241 MQPIRRSFSMDSSSNRKMFVVVQAAVRQNCGGEN--EIEGCSNRIRRSFFSFGKGKGSRN 300
           +QPIRRSFSMDSS +R++++ VQAAVRQ+ GGE+  E EGCSNR+RRSFFSFG G+GSRN
Sbjct: 241 VQPIRRSFSMDSSGDRQLYMAVQAAVRQSGGGESRVEAEGCSNRVRRSFFSFGSGRGSRN 296

Query: 301 AILPIQIQP 305
            +LPIQ+QP
Sbjct: 301 GVLPIQLQP 296

[Close]

BLAST of Carg10959 vs. TAIR 10
Match: AT5G43420.1 (RING/U-box superfamily protein )

HSP 1 Score: 224.2 bits (570), Expect = 1.4e-58
Identity = 141/351 (40.17%), Postives = 201/351 (57.26%), Query Frame = 0


Query: 15  SSTYVSSFPIIAVAVVVFCATAIFLVGYYIFAIRGCFNWHPIEILHQFSLSDSR---EDT 74
           +S+  +SFPI+AVAV+   ATA  LV YY+F I+ C NWH I+IL +FSLS  R   +D 
Sbjct: 27  ASSTGTSFPILAVAVIGILATAFLLVSYYVFVIKCCLNWHRIDILGRFSLSRRRRNDQDP 86

Query: 75  VILQEP-VEPHGLDPLTIQSIPLIRYKK-------------PTNESTAGSECAVCLMEFQ 134
           +++  P +   GLD   I++IP+ ++KK                E     EC+VCL EFQ
Sbjct: 87  LMVYSPELRSRGLDESVIRAIPIFKFKKRYDQNDGVFTGEGEEEEEKRSQECSVCLSEFQ 146

Query: 135 PEEELRKIPICSHLFHVDCIDIWFQNNSNCPLCRATISAKNWLIPADQPPSPQDSAPNFI 194
            EE+LR IP CSHLFH+DCID+W QNN+NCPLCR  +S  +   P D+  +P  S  N +
Sbjct: 147 DEEKLRIIPNCSHLFHIDCIDVWLQNNANCPLCRTRVSC-DTSFPPDRVSAPSTSPENLV 206

Query: 195 PIAAAIEEFPVIEV---VRNPNRSRPHSSIF--REASKSG-------------------- 254
            +     E+ VIE+   + +   S  H  +   +E S SG                    
Sbjct: 207 MLRGE-NEYVVIELGSSIGSDRDSPRHGRLLTGQERSNSGYLLNENTQNSISPSPKKLDR 266

Query: 255 -------RKLTKVTSMGDECIDMRK-KDEEFFLMQPIRRSFSMDSSSNRKMFVVVQAAVR 305
                  RKL K+TSMGDECID+R+ KDE+F  +QPIRRS SMDSS++R++++ VQ A+R
Sbjct: 267 GGLPRKFRKLHKMTSMGDECIDIRRGKDEQFGSIQPIRRSISMDSSADRQLYLAVQEAIR 326

[Close]

BLAST of Carg10959 vs. TAIR 10
Match: AT1G04360.1 (RING/U-box superfamily protein )

HSP 1 Score: 200.3 bits (508), Expect = 2.2e-51
Identity = 134/348 (38.51%), Postives = 187/348 (53.74%), Query Frame = 0


Query: 15  SSTYVSSFPIIAVAVVVFCATAIFLVGYYIFAIRGCFNWHPIEILHQFSLSDSREDTVIL 74
           +S+  ++FPI+A+AV+   ATA  LV YYIF I+ C NWH I+I  +   S  +   +I 
Sbjct: 34  TSSSGTNFPILAIAVIGILATAFLLVSYYIFVIKCCLNWHQIDIFRRRRRSSDQNPLMIY 93

Query: 75  QEPVEPHGLDPLTIQSIPLIRYKK------PTNESTAGSECAVCLMEFQPEEELRKIPIC 134
                  GLD   I++IP+ ++KK        ++S    EC+VCL EFQ +E+LR IP C
Sbjct: 94  SPHEVNRGLDESAIRAIPVFKFKKRDVVAGEEDQSKNSQECSVCLNEFQEDEKLRIIPNC 153

Query: 135 SHLFHVDCIDIWFQNNSNCPLCRATIS--AKNWLIPADQPPSPQDSAP-----NFIP--I 194
            H+FH+DCIDIW Q N+NCPLCR ++S  A   L     P SP++++P     N  P  +
Sbjct: 154 CHVFHIDCIDIWLQGNANCPLCRTSVSCEASFTLDLISAPSSPRENSPHSRNRNLEPGLV 213

Query: 195 AAAIEEFPVIEV----------VRN--------------------PNRSRPHSSIF--RE 254
               ++F VIE+          VRN                    P    P    F  R 
Sbjct: 214 LGGDDDFVVIELGASNGNNRESVRNIDFLTEQERVTSNEVSTGNSPKSVSPLPIKFGNRG 273

Query: 255 ASKSGRKLTKVTSMGDECIDMRKKDEEFFLMQPIRRSFSMDSSSNRKMFVVVQAAV-RQN 305
             K  RK  KVTSMGDECID R KD  F  +QPIRRS SMDSS +R++++ VQ  + R+N
Sbjct: 274 MYKKERKFHKVTSMGDECIDTRGKDGHFGEIQPIRRSISMDSSVDRQLYLAVQEEISRRN 333

[Close]

BLAST of Carg10959 vs. TAIR 10
Match: AT5G17600.1 (RING/U-box superfamily protein )

HSP 1 Score: 95.9 bits (237), Expect = 6.0e-20
Identity = 51/146 (34.93%), Postives = 81/146 (55.48%), Query Frame = 0


Query: 15  SSTYVSSFPIIAVAVVVFCATAIFLVGYYIFAIRGCFNWHPIEILHQFSLSDSREDTVIL 74
           SS+  SSF  + +A++    +A+ LV YY    + C   H        +L+ + E     
Sbjct: 47  SSSSSSSFSPLLIALIGILTSALILVSYYTLISKYCHRHHQTSSSETLNLNHNGEGFFSS 106

Query: 75  QEPVEPH--GLDPLTIQSIPLIRYKKPTNESTAGSECAVCLMEFQPEEELRKIPICSHLF 134
            + +  +  GL+   I+SI + +YK   +    GS+C+VCL EF+  E LR +P C+H F
Sbjct: 107 TQRISTNGDGLNESMIKSITVYKYKS-GDGFVDGSDCSVCLSEFEENESLRLLPKCNHAF 166

Query: 135 HVDCIDIWFQNNSNCPLCRATISAKN 159
           H+ CID W +++SNCPLCRA ++  N
Sbjct: 167 HLPCIDTWLKSHSNCPLCRAFVTGVN 191

[Close]

BLAST of Carg10959 vs. TAIR 10
Match: AT3G62690.1 (AtL5 )

HSP 1 Score: 91.3 bits (225), Expect = 1.5e-18
Identity = 65/200 (32.50%), Postives = 99/200 (49.50%), Query Frame = 0


Query: 15  SSTYVSSFPIIAVAVVVFCATAIFLVGYYIFAIRGCFNWHPIEI-----LHQFSLSDSRE 74
           SS Y  +  I+  +V++     I ++ ++ +A R  F      I      H  SL+ +R+
Sbjct: 19  SSRYSLNGKIMLASVIILFVAVILILCFHSYA-RWLFRRQNRRIRRRISAHLRSLAAARD 78

Query: 75  DTVILQEPVEPHGLDPLTIQSIPLIRYKKPTNESTAGSECAVCLMEFQPEEELRKIPICS 134
            T   Q       LDP  ++ IP+  Y   T+ES    EC+VCL EF+ ++E R +P C 
Sbjct: 79  PT---QSSSSLSPLDPTVLEKIPIFVYSVKTHESPL-EECSVCLSEFEEDDEGRVLPKCG 138

Query: 135 HLFHVDCIDIWFQNNSNCPLCRATISAKNWLIPADQPPSPQDSAPNFIPIAAAIEEFPVI 194
           H+FHVDCID WF++ S+CPLCRA +       PA     P+       P+AA    FP +
Sbjct: 139 HVFHVDCIDTWFRSRSSCPLCRAPVQ------PAQPVTEPE-------PVAAV---FPSV 197

Query: 195 EVVRNPNRSRPHSSIFREAS 210
           + + +       SS   E+S
Sbjct: 199 KPIEDTEAGSSSSSDESESS 197

[Close]

BLAST of Carg10959 vs. TAIR 10
Match: AT1G23980.1 (RING/U-box superfamily protein )

HSP 1 Score: 90.9 bits (224), Expect = 1.9e-18
Identity = 56/138 (40.58%), Postives = 75/138 (54.35%), Query Frame = 0


Query: 22  FPIIAVAVVVF-CATAIFLVGYYIFAIRGCFNWHPIEILHQFSLSDSREDTVILQEPVEP 81
           F I+ ++V+ F C+    LV YY+   R   +  P E       SDS      LQ+    
Sbjct: 55  FIIVLLSVIFFICSILHLLVRYYLKKKRSNLSSSPNESNQNPEFSDSDTYQRQLQQLFHL 114

Query: 82  H--GLDPLTIQSIPLIRYK--KPTNESTAGSECAVCLMEFQPEEELRKIPICSHLFHVDC 141
           H  GLD   I ++P+  YK  K T E     +CAVCL EF  +++LR +P CSH FH+DC
Sbjct: 115 HDSGLDQALIDALPVFLYKEIKGTKEP---FDCAVCLCEFSEDDKLRLLPNCSHAFHIDC 174

Query: 142 IDIWFQNNSNCPLCRATI 155
           ID W  +NS CPLCR T+
Sbjct: 175 IDTWLLSNSTCPLCRGTL 189

The following BLAST results are available for this feature:

BLAST of Carg10959 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022930409.1	4.8e-173	100.00	RING-H2 finger protein ATL16-like [Cucurbita moschata] >XP_023514893.1 RING-H2 f...	[more]
KAG6593842.1	2.9e-170	98.05	RING-H2 finger protein ATL16, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023000529.1	7.7e-163	95.39	RING-H2 finger protein ATL16-like [Cucurbita maxima]	[more]
XP_038875603.1	2.9e-109	67.43	RING-H2 finger protein ATL16-like [Benincasa hispida]	[more]
XP_008460634.1	4.6e-107	66.12	PREDICTED: RING-H2 finger protein ATL16 [Cucumis melo] >KAA0065677.1 RING-H2 fin...	[more]

BLAST of Carg10959 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LSW9	2.0e-57	40.17	RING-H2 finger protein ATL16 OS=Arabidopsis thaliana OX=3702 GN=ATL16 PE=2 SV=1	[more]
P93823	3.2e-50	38.51	RING-H2 finger protein ATL1 OS=Arabidopsis thaliana OX=3702 GN=ATL1 PE=2 SV=1	[more]
Q9LF64	8.4e-19	34.93	RING-H2 finger protein ATL52 OS=Arabidopsis thaliana OX=3702 GN=ATL52 PE=2 SV=1	[more]
Q9LZJ6	2.1e-17	32.50	RING-H2 finger protein ATL5 OS=Arabidopsis thaliana OX=3702 GN=ATL5 PE=2 SV=1	[more]
Q8GW38	2.7e-17	40.58	RING-H2 finger protein ATL47 OS=Arabidopsis thaliana OX=3702 GN=ATL47 PE=2 SV=1	[more]

BLAST of Carg10959 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1ERC0	2.3e-173	100.00	RING-H2 finger protein ATL16-like OS=Cucurbita moschata OX=3662 GN=LOC111436863 ...	[more]
A0A6J1KK90	3.7e-163	95.39	RING-H2 finger protein ATL16-like OS=Cucurbita maxima OX=3661 GN=LOC111494770 PE...	[more]
A0A5A7VEZ8	2.2e-107	66.12	RING-H2 finger protein ATL16 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A1S3CD01	2.2e-107	66.12	RING-H2 finger protein ATL16 OS=Cucumis melo OX=3656 GN=LOC103499411 PE=4 SV=1	[more]
A0A6J1L4L0	7.2e-106	65.37	RING-H2 finger protein ATL16-like OS=Cucurbita maxima OX=3661 GN=LOC111499094 PE...	[more]

BLAST of Carg10959 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G43420.1	1.4e-58	40.17	RING/U-box superfamily protein	[more]
AT1G04360.1	2.2e-51	38.51	RING/U-box superfamily protein	[more]
AT5G17600.1	6.0e-20	34.93	RING/U-box superfamily protein	[more]
AT3G62690.1	1.5e-18	32.50	AtL5	[more]
AT1G23980.1	1.9e-18	40.58	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 109..150 e-value: 1.6E-5 score: 34.4
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 108..151 e-value: 4.5E-12 score: 46.1
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 109..151 score: 11.972923
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 71..157 e-value: 9.3E-22 score: 78.5
IPR044600	RING-H2 finger protein ATL1/ATL16	PANTHER	PTHR46913	RING-H2 FINGER PROTEIN ATL16	coord: 14..303
None	No IPR available	PANTHER	PTHR46913:SF1	RING-H2 FINGER PROTEIN ATL16	coord: 14..303
None	No IPR available	CDD	cd16461	RING-H2_EL5_like	coord: 108..151 e-value: 8.03826E-17 score: 70.8019
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 88..157

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg10959-RA	Carg10959-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0016740	transferase activity