Carg10957 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg10957
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	CASP-like protein
Location	Carg_Chr08: 6439509 .. 6441704 (-)
RNA-Seq Expression	Carg10957
Synteny	Carg10957

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTGAGGGGTTTCTGTGGCTTGTGGATGGAGTATTGTGGGAGAAGAAAATGGGGGGTTTTGTTGCATTTGGGATCTGTGATTGAGTGCGTTTTGATTTGGAGAAAAGGGGAAATATGTTGGATTTTCCTGGGACTCCAGGGACTTTGACTGCCTTTGTTTTGAGGATTTTGCAATGCGTTTTTGCTGCTGGTTCTGTTGCTTCCATGGCTACTGCTGTTGGCTTCTATAACTTCACAGCTTTTTGGTATCTATTGATTCTTACCCTTCTCTTCTCTTTCTTTTGGCTTTGATTGTTCTTGATTGTGATTGGAATCGAATATTCTTCAAGGGTTTTTGTTCTCCATTTCAATGGAGCATAAGGATTTTATGACTGGATGTGATCCTTGCCTTCTGCTGTGGTTTGGCTCCTTTTTGTTTGGAAATAGCTATACTTTTGAATAATTGAACAGGGCATTTGGGGTTTTGGGATGGGGTTAGAGTTCTTTGTTTGTTTATCTAGAGCTGTTCTTGCAGGGCTATCAAACATCCTCTTGTGTTCTTGAGCTTAGCATTAACTCTATCTATTCTTCTTTATTCATTTGATGTGAGTAAACTTTGTGACAAGTTCAATGTAGATTATGCTTTATATTAATGCTTATAAACATCCCTTAGGTGAAGCTTATTAGGAAAGAAACTGGCTATATCTTAACTTTCTAGATTGTCTCCGACCTGAATATAACTTAATTGGTTGAGATATATTTCTTCGATCAAGAGATCAAATGTTCAAATCTCTCGAGCATACCAACTCTTCCTTTGATGTATTTCTCTCTCAAGTACTACAATTGCTTCCTCAAGGGGATTTTGTGTAACCACCCAAGCCTACCGCTAGTTGATATTGTTTTCTTTGGGCTTTCCCTCAAGGTTTTAAAATGTGTCTACTAGGGAGAGGTTTGTGCATACCCTTATAAGTAATGTTTTGTTCTCTCCAATTGATGTGAGACCTTACAATCCACCCCCTTGGGAGCTCGACGTCCTTGCTGGCACACTGCCCGGTGTTTGACTCTAATACCATTTGTAACAGCCCAAGCCCATTGCTAGCTGATATTGTCCTTTTTGGGCTTCCCCTCAAGGTTTTAAAACGCGTCTACTAGGGAGAAGTTTCCATACTCTTATAAGGAATGTTTCGTTATCCTCTTCAACCGATGTGGGACCTTACAATCCAACCCTCCTTGGGGGCCCAACATCCTCGCTAGTACACCACCCGGTGTTTGGCTCTGATGCCATTTATAACAGCTCAAATCCATCGCTAGTAGATATTGTTCTCTTTTGGGTTTCTCTTCTGGGCTTCTTCTCAAGGTTTTAAAACGAGTCTACTAGGGAGAGGTTTCCACATCCATATAAGAAATGTTTCGTTCTCCTCTCCAACCGATGTGGGACCTCACATTTTGTGATCATTCATTGAATGCAATAAAATTTCTACCTTATAGTAAAGTGATCAAGTTTGACAGGACATACGACACAAATTTAAACGTATTGATGCCGTTTTCTTTGGATGTATCTTCATCTATCCCAAATGAACTCTTAGTTTGTGATATGACATGCAGCTATGTGATTGCATCAATGGGTCTGCAAGTGACATGGAGTTTCATGTTGGCATTGTTAGATGCATATGCATTGCTAAGAAAGAAGATGCTTCATAACCCCATTCTTGTCAGCCTCTTTGTAGTTGGGGATTGGGTGAGAACTGAGCACCTACAAAATTCTTAGTTTCTTTAGATTTTGTCTTGTGATTACTACTAGAAGTTCAACCATTTCTCCATCGATTGGTTTGCAGGTGACAGCAACCTTGTCTCTTGCCGCAGCTTCCGCCTCAGGTGGCGTAGCCGTCTTGTTCTTCAGCAATTTGGGACACTGTAGTTTCGGCGACGAATGTCGAAAGTTTCAAATCTCCGTTGTTTTAGCCTTTCTAAGCTGGATAACCATAGCCATTTCAGCTCTGATCATGCTCTGGATATTGGCTGCAGGTTGAAGACGACTTCAGCCACGCAATTTCGTGTAGTTTTCGTACATCTGTCTAATCTTTCTTCATTGTTCTACAATGCAAAAGAATGAAGACATGAGATAGAATGATGCTAATGTGCAGTTTGTTAAAGAACCGTGTTTTTTCTTGATGAGACTTGAAAGAAATAGAAGTAAAGTTGTATGGTTTTGGGCT

mRNA sequence

ATTTGAGGGGTTTCTGTGGCTTGTGGATGGAGTATTGTGGGAGAAGAAAATGGGGGGTTTTGTTGCATTTGGGATCTGTGATTGAGTGCGTTTTGATTTGGAGAAAAGGGGAAATATGTTGGATTTTCCTGGGACTCCAGGGACTTTGACTGCCTTTGTTTTGAGGATTTTGCAATGCGTTTTTGCTGCTGGTTCTGTTGCTTCCATGGCTACTGCTGTTGGCTTCTATAACTTCACAGCTTTTTGCTATGTGATTGCATCAATGGGTCTGCAAGTGACATGGAGTTTCATGTTGGCATTGTTAGATGCATATGCATTGCTAAGAAAGAAGATGCTTCATAACCCCATTCTTGTCAGCCTCTTTGTAGTTGGGGATTGGGTGACAGCAACCTTGTCTCTTGCCGCAGCTTCCGCCTCAGGTGGCGTAGCCGTCTTGTTCTTCAGCAATTTGGGACACTGTAGTTTCGGCGACGAATGTCGAAAGTTTCAAATCTCCGTTGTTTTAGCCTTTCTAAGCTGGATAACCATAGCCATTTCAGCTCTGATCATGCTCTGGATATTGGCTGCAGGTTGAAGACGACTTCAGCCACGCAATTTCGTGTAGTTTTCGTACATCTGTCTAATCTTTCTTCATTGTTCTACAATGCAAAAGAATGAAGACATGAGATAGAATGATGCTAATGTGCAGTTTGTTAAAGAACCGTGTTTTTTCTTGATGAGACTTGAAAGAAATAGAAGTAAAGTTGTATGGTTTTGGGCT

Coding sequence (CDS)

ATGTTGGATTTTCCTGGGACTCCAGGGACTTTGACTGCCTTTGTTTTGAGGATTTTGCAATGCGTTTTTGCTGCTGGTTCTGTTGCTTCCATGGCTACTGCTGTTGGCTTCTATAACTTCACAGCTTTTTGCTATGTGATTGCATCAATGGGTCTGCAAGTGACATGGAGTTTCATGTTGGCATTGTTAGATGCATATGCATTGCTAAGAAAGAAGATGCTTCATAACCCCATTCTTGTCAGCCTCTTTGTAGTTGGGGATTGGGTGACAGCAACCTTGTCTCTTGCCGCAGCTTCCGCCTCAGGTGGCGTAGCCGTCTTGTTCTTCAGCAATTTGGGACACTGTAGTTTCGGCGACGAATGTCGAAAGTTTCAAATCTCCGTTGTTTTAGCCTTTCTAAGCTGGATAACCATAGCCATTTCAGCTCTGATCATGCTCTGGATATTGGCTGCAGGTTGA

Protein sequence

MLDFPGTPGTLTAFVLRILQCVFAAGSVASMATAVGFYNFTAFCYVIASMGLQVTWSFMLALLDAYALLRKKMLHNPILVSLFVVGDWVTATLSLAAASASGGVAVLFFSNLGHCSFGDECRKFQISVVLAFLSWITIAISALIMLWILAAG

Homology

[Close]

BLAST of Carg10957 vs. NCBI nr
Match: XP_022930413.1 (CASP-like protein 5B3 [Cucurbita moschata] >XP_023000558.1 CASP-like protein 5B3 [Cucurbita maxima] >XP_023514001.1 CASP-like protein 5B3 [Cucurbita pepo subsp. pepo] >KAG7026176.1 CASP-like protein 5B3 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 287.0 bits (733), Expect = 9.8e-74
Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0


Query: 1   MLDFPGTPGTLTAFVLRILQCVFAAGSVASMATAVGFYNFTAFCYVIASMGLQVTWSFML 60
           MLDFPGTPGTLTAFVLRILQCVFAAGSVASMATAVGFYNFTAFCYVIASMGLQVTWSFML
Sbjct: 1   MLDFPGTPGTLTAFVLRILQCVFAAGSVASMATAVGFYNFTAFCYVIASMGLQVTWSFML 60

Query: 61  ALLDAYALLRKKMLHNPILVSLFVVGDWVTATLSLAAASASGGVAVLFFSNLGHCSFGDE 120
           ALLDAYALLRKKMLHNPILVSLFVVGDWVTATLSLAAASASGGVAVLFFSNLGHCSFGDE
Sbjct: 61  ALLDAYALLRKKMLHNPILVSLFVVGDWVTATLSLAAASASGGVAVLFFSNLGHCSFGDE 120

Query: 121 CRKFQISVVLAFLSWITIAISALIMLWILAAG 153
           CRKFQISVVLAFLSWITIAISALIMLWILAAG
Sbjct: 121 CRKFQISVVLAFLSWITIAISALIMLWILAAG 152

[Close]

BLAST of Carg10957 vs. NCBI nr
Match: KAG6593844.1 (1-aminocyclopropane-1-carboxylate oxidase-like 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 287.0 bits (733), Expect = 9.8e-74
Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0


Query: 1   MLDFPGTPGTLTAFVLRILQCVFAAGSVASMATAVGFYNFTAFCYVIASMGLQVTWSFML 60
           MLDFPGTPGTLTAFVLRILQCVFAAGSVASMATAVGFYNFTAFCYVIASMGLQVTWSFML
Sbjct: 320 MLDFPGTPGTLTAFVLRILQCVFAAGSVASMATAVGFYNFTAFCYVIASMGLQVTWSFML 379

Query: 61  ALLDAYALLRKKMLHNPILVSLFVVGDWVTATLSLAAASASGGVAVLFFSNLGHCSFGDE 120
           ALLDAYALLRKKMLHNPILVSLFVVGDWVTATLSLAAASASGGVAVLFFSNLGHCSFGDE
Sbjct: 380 ALLDAYALLRKKMLHNPILVSLFVVGDWVTATLSLAAASASGGVAVLFFSNLGHCSFGDE 439

Query: 121 CRKFQISVVLAFLSWITIAISALIMLWILAAG 153
           CRKFQISVVLAFLSWITIAISALIMLWILAAG
Sbjct: 440 CRKFQISVVLAFLSWITIAISALIMLWILAAG 471

[Close]

BLAST of Carg10957 vs. NCBI nr
Match: XP_038875242.1 (CASP-like protein 5B3 isoform X1 [Benincasa hispida])

HSP 1 Score: 275.4 bits (703), Expect = 2.9e-70
Identity = 143/151 (94.70%), Postives = 149/151 (98.68%), Query Frame = 0


Query: 1   MLDFPGTPGTLTAFVLRILQCVFAAGSVASMATAVGFYNFTAFCYVIASMGLQVTWSFML 60
           MLDFPGTPGTLT FVLRILQCVFAAGS+ASMAT+VGFYNFTAFCYVIASMGLQVTWSFML
Sbjct: 1   MLDFPGTPGTLTGFVLRILQCVFAAGSIASMATSVGFYNFTAFCYVIASMGLQVTWSFML 60

Query: 61  ALLDAYALLRKKMLHNPILVSLFVVGDWVTATLSLAAASASGGVAVLFFSNLGHCSFGDE 120
           ALLDAYAL+RKKMLHNPILVSLFVVGDWVTATLSLAAASASGGVAVLFFS+LGHC+FGDE
Sbjct: 61  ALLDAYALVRKKMLHNPILVSLFVVGDWVTATLSLAAASASGGVAVLFFSDLGHCNFGDE 120

Query: 121 CRKFQISVVLAFLSWITIAISALIMLWILAA 152
           CRKFQISVVLAFLSWITIA+SALIMLWIL A
Sbjct: 121 CRKFQISVVLAFLSWITIAVSALIMLWILVA 151

[Close]

BLAST of Carg10957 vs. NCBI nr
Match: XP_004142183.1 (CASP-like protein 5B3 isoform X1 [Cucumis sativus])

HSP 1 Score: 271.2 bits (692), Expect = 5.5e-69
Identity = 141/151 (93.38%), Postives = 147/151 (97.35%), Query Frame = 0


Query: 1   MLDFPGTPGTLTAFVLRILQCVFAAGSVASMATAVGFYNFTAFCYVIASMGLQVTWSFML 60
           MLDFPGTPGTLT FVLRILQCVFAAGS+ASMAT++GFYNFTAFCYVIASMGLQVTWS ML
Sbjct: 1   MLDFPGTPGTLTGFVLRILQCVFAAGSIASMATSIGFYNFTAFCYVIASMGLQVTWSLML 60

Query: 61  ALLDAYALLRKKMLHNPILVSLFVVGDWVTATLSLAAASASGGVAVLFFSNLGHCSFGDE 120
           ALLDAYAL+RKKMLHNPILVSLFVVGDWVTATLSLAAASASGGVAVLFFS+LGHCSFG E
Sbjct: 61  ALLDAYALVRKKMLHNPILVSLFVVGDWVTATLSLAAASASGGVAVLFFSDLGHCSFGKE 120

Query: 121 CRKFQISVVLAFLSWITIAISALIMLWILAA 152
           CRKFQISVVLAFLSWIT+ ISALIMLWILAA
Sbjct: 121 CRKFQISVVLAFLSWITVTISALIMLWILAA 151

[Close]

BLAST of Carg10957 vs. NCBI nr
Match: KAA0065678.1 (CASP-like protein 5B3 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 270.8 bits (691), Expect = 7.2e-69
Identity = 142/151 (94.04%), Postives = 148/151 (98.01%), Query Frame = 0


Query: 1   MLDFPGTPGTLTAFVLRILQCVFAAGSVASMATAVGFYNFTAFCYVIASMGLQVTWSFML 60
           ML FPGTPGTLT FVLRILQCVFAAGS+ASMAT+VGFYNFTAFCYVIASMGLQVTWS ML
Sbjct: 7   MLAFPGTPGTLTGFVLRILQCVFAAGSIASMATSVGFYNFTAFCYVIASMGLQVTWSLML 66

Query: 61  ALLDAYALLRKKMLHNPILVSLFVVGDWVTATLSLAAASASGGVAVLFFSNLGHCSFGDE 120
           ALLDAYAL+RKKMLHNPILVSLFVVGDWVTATLSLAAASASGGVAVLFFS+LGHCSFG+E
Sbjct: 67  ALLDAYALVRKKMLHNPILVSLFVVGDWVTATLSLAAASASGGVAVLFFSDLGHCSFGNE 126

Query: 121 CRKFQISVVLAFLSWITIAISALIMLWILAA 152
           CRKFQISVVLAFLSWIT+AISALIMLWILAA
Sbjct: 127 CRKFQISVVLAFLSWITVAISALIMLWILAA 157

[Close]

BLAST of Carg10957 vs. ExPASy Swiss-Prot
Match: Q8L7R5 (CASP-like protein 5B3 OS=Arabidopsis thaliana OX=3702 GN=At3g23200 PE=2 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 3.2e-51
Identity = 103/151 (68.21%), Postives = 127/151 (84.11%), Query Frame = 0


Query: 1   MLDFPGTPGTLTAFVLRILQCVFAAGSVASMATAVGFYNFTAFCYVIASMGLQVTWSFML 60
           M+D PGTPGTLT  VLRI QCVFAAGS++ M T+ GF++FTAFCY+IA+MGLQV WSF L
Sbjct: 1   MIDIPGTPGTLTGLVLRISQCVFAAGSISYMVTSGGFFSFTAFCYLIAAMGLQVIWSFGL 60

Query: 61  ALLDAYALLRKKMLHNPILVSLFVVGDWVTATLSLAAASASGGVAVLFFSNLGHCSFGDE 120
           A+LD +AL+RKK L +P+LVSLFVVGDWVT+TLSLA AS+S G+ VL+F +LG CSF  E
Sbjct: 61  AILDTFALVRKKTLLSPVLVSLFVVGDWVTSTLSLAGASSSAGITVLYFGDLGSCSFEAE 120

Query: 121 CRKFQISVVLAFLSWITIAISALIMLWILAA 152
           C K+Q+SV LAFL WITIA+S+L  LW+LA+
Sbjct: 121 CWKYQLSVALAFLCWITIAVSSLTTLWLLAS 151

[Close]

BLAST of Carg10957 vs. ExPASy Swiss-Prot
Match: B8BD96 (CASP-like protein 5B3 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_30532 PE=3 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 3.6e-39
Identity = 88/153 (57.52%), Postives = 113/153 (73.86%), Query Frame = 0


Query: 1   MLDFPGTPGTLTAFVLRILQCVFAAGSVASMATAVGFYNFTAFCYVIASMGLQVTWSFML 60
           M D  G+PGT +   LR+ QCVFA  SV +MA+A GF N+TAFCY+IASMGLQ+ WSF L
Sbjct: 1   MKDVVGSPGTWSGMSLRVSQCVFAGASVVAMASAYGFSNYTAFCYLIASMGLQLLWSFGL 60

Query: 61  ALLDAYALLRKKMLHNPILVSLFVVGDWVTATLSLAAASASGGVAVLFFSNLGHCSFGDE 120
           A LD Y+L  K+ LHNP+LVSLFVVGDWVTA LS AAASAS GV +LF  ++  C    +
Sbjct: 61  ACLDIYSLQTKRDLHNPVLVSLFVVGDWVTAILSFAAASASAGVTILFERDVHFCRMYPQ 120

Query: 121 --CRKFQISVVLAFLSWITIAISALIMLWILAA 152
             C ++++SV+LAF++W  IA SA+ M W+LA+
Sbjct: 121 LSCGRYELSVILAFITWSFIATSAVSMFWLLAS 153

[Close]

BLAST of Carg10957 vs. ExPASy Swiss-Prot
Match: Q6K478 (CASP-like protein 5B3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os09g0249400 PE=2 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 3.6e-39
Identity = 88/153 (57.52%), Postives = 113/153 (73.86%), Query Frame = 0


Query: 1   MLDFPGTPGTLTAFVLRILQCVFAAGSVASMATAVGFYNFTAFCYVIASMGLQVTWSFML 60
           M D  G+PGT +   LR+ QCVFA  SV +MA+A GF N+TAFCY+IASMGLQ+ WSF L
Sbjct: 1   MKDVVGSPGTWSGMSLRVSQCVFAGASVVAMASAYGFSNYTAFCYLIASMGLQLLWSFGL 60

Query: 61  ALLDAYALLRKKMLHNPILVSLFVVGDWVTATLSLAAASASGGVAVLFFSNLGHCSFGDE 120
           A LD Y+L  K+ LHNP+LVSLFVVGDWVTA LS AAASAS GV +LF  ++  C    +
Sbjct: 61  ACLDIYSLQTKRDLHNPVLVSLFVVGDWVTAILSFAAASASAGVTILFERDVHFCRMYPQ 120

Query: 121 --CRKFQISVVLAFLSWITIAISALIMLWILAA 152
             C ++++SV+LAF++W  IA SA+ M W+LA+
Sbjct: 121 LSCGRYELSVILAFITWSFIATSAVSMFWLLAS 153

[Close]

BLAST of Carg10957 vs. ExPASy Swiss-Prot
Match: B6T990 (CASP-like protein 5B3 OS=Zea mays OX=4577 PE=2 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 9.0e-38
Identity = 87/151 (57.62%), Postives = 109/151 (72.19%), Query Frame = 0


Query: 1   MLDFPGTPGTLTAFVLRILQCVFAAGSVASMATAVGFYNFTAFCYVIASMGLQVTWSFML 60
           M D  G+PGT +   LR+ QCV A  S+ +MATA GF N+TAFCY+IASMGLQ+ WSF L
Sbjct: 1   MKDVVGSPGTWSGMALRLSQCVSAGASMGAMATAYGFSNYTAFCYLIASMGLQLLWSFGL 60

Query: 61  ALLDAYALLRKKMLHNPILVSLFVVGDWVTATLSLAAASASGGVAVLFFSNLGHCSFGDE 120
           A LD Y+L  K+ LHNP+LVSLFVVGDWVTA LS AAASAS GV +LF  ++  C    +
Sbjct: 61  ACLDVYSLKTKRDLHNPVLVSLFVVGDWVTAILSFAAASASAGVTILFERDVHFCRMYPQ 120

Query: 121 --CRKFQISVVLAFLSWITIAISALIMLWIL 150
             C ++ +SVVLAF++W  IA SA+ M W+L
Sbjct: 121 LSCGRYALSVVLAFITWSFIATSAVSMFWLL 151

[Close]

BLAST of Carg10957 vs. ExPASy Swiss-Prot
Match: D5ACW4 (CASP-like protein 5B1 (Fragment) OS=Picea sitchensis OX=3332 PE=2 SV=2)

HSP 1 Score: 152.1 bits (383), Expect = 4.9e-36
Identity = 85/151 (56.29%), Postives = 108/151 (71.52%), Query Frame = 0


Query: 1   MLDFPGTPGTLTAFVLRILQCVFAAGSVASMATAVGFYNFTAFCYVIASMGLQVTWSFML 60
           M D PGTPGT+    LR+ Q +FAA SV  M T+  F NFTAFCY+ A+M LQ  WSF+L
Sbjct: 32  MKDLPGTPGTVGGLALRMGQFIFAAASVVIMVTSDEFINFTAFCYLAAAMALQFLWSFVL 91

Query: 61  ALLDAYALLRKKMLHNPILVSLFVVGDWVTATLSLAAASASGGVAVLFFSNLGHCSFGDE 120
           A +D YALL K+ L N IL+SLFVVGDWVTATLSLAAA ++ G+ VLF  +L +C     
Sbjct: 92  ATIDVYALLIKRGLPNSILLSLFVVGDWVTATLSLAAACSTAGITVLFDKDLNYCD-QMH 151

Query: 121 CRKFQISVVLAFLSWITIAISALIMLWILAA 152
           CR++Q+S  +AF SW+ IAIS+LI L +L +
Sbjct: 152 CRRYQLSATMAFFSWVLIAISSLITLLLLVS 181

[Close]

BLAST of Carg10957 vs. ExPASy TrEMBL
Match: A0A6J1KMZ0 (CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111494799 PE=3 SV=1)

HSP 1 Score: 287.0 bits (733), Expect = 4.7e-74
Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0


Query: 1   MLDFPGTPGTLTAFVLRILQCVFAAGSVASMATAVGFYNFTAFCYVIASMGLQVTWSFML 60
           MLDFPGTPGTLTAFVLRILQCVFAAGSVASMATAVGFYNFTAFCYVIASMGLQVTWSFML
Sbjct: 1   MLDFPGTPGTLTAFVLRILQCVFAAGSVASMATAVGFYNFTAFCYVIASMGLQVTWSFML 60

Query: 61  ALLDAYALLRKKMLHNPILVSLFVVGDWVTATLSLAAASASGGVAVLFFSNLGHCSFGDE 120
           ALLDAYALLRKKMLHNPILVSLFVVGDWVTATLSLAAASASGGVAVLFFSNLGHCSFGDE
Sbjct: 61  ALLDAYALLRKKMLHNPILVSLFVVGDWVTATLSLAAASASGGVAVLFFSNLGHCSFGDE 120

Query: 121 CRKFQISVVLAFLSWITIAISALIMLWILAAG 153
           CRKFQISVVLAFLSWITIAISALIMLWILAAG
Sbjct: 121 CRKFQISVVLAFLSWITIAISALIMLWILAAG 152

[Close]

BLAST of Carg10957 vs. ExPASy TrEMBL
Match: A0A6J1EV36 (CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111436867 PE=3 SV=1)

HSP 1 Score: 287.0 bits (733), Expect = 4.7e-74
Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0


Query: 1   MLDFPGTPGTLTAFVLRILQCVFAAGSVASMATAVGFYNFTAFCYVIASMGLQVTWSFML 60
           MLDFPGTPGTLTAFVLRILQCVFAAGSVASMATAVGFYNFTAFCYVIASMGLQVTWSFML
Sbjct: 1   MLDFPGTPGTLTAFVLRILQCVFAAGSVASMATAVGFYNFTAFCYVIASMGLQVTWSFML 60

Query: 61  ALLDAYALLRKKMLHNPILVSLFVVGDWVTATLSLAAASASGGVAVLFFSNLGHCSFGDE 120
           ALLDAYALLRKKMLHNPILVSLFVVGDWVTATLSLAAASASGGVAVLFFSNLGHCSFGDE
Sbjct: 61  ALLDAYALLRKKMLHNPILVSLFVVGDWVTATLSLAAASASGGVAVLFFSNLGHCSFGDE 120

Query: 121 CRKFQISVVLAFLSWITIAISALIMLWILAAG 153
           CRKFQISVVLAFLSWITIAISALIMLWILAAG
Sbjct: 121 CRKFQISVVLAFLSWITIAISALIMLWILAAG 152

[Close]

BLAST of Carg10957 vs. ExPASy TrEMBL
Match: A0A0A0LIJ4 (CASP-like protein OS=Cucumis sativus OX=3659 GN=Csa_2G179230 PE=3 SV=1)

HSP 1 Score: 271.2 bits (692), Expect = 2.7e-69
Identity = 141/151 (93.38%), Postives = 147/151 (97.35%), Query Frame = 0


Query: 1   MLDFPGTPGTLTAFVLRILQCVFAAGSVASMATAVGFYNFTAFCYVIASMGLQVTWSFML 60
           MLDFPGTPGTLT FVLRILQCVFAAGS+ASMAT++GFYNFTAFCYVIASMGLQVTWS ML
Sbjct: 1   MLDFPGTPGTLTGFVLRILQCVFAAGSIASMATSIGFYNFTAFCYVIASMGLQVTWSLML 60

Query: 61  ALLDAYALLRKKMLHNPILVSLFVVGDWVTATLSLAAASASGGVAVLFFSNLGHCSFGDE 120
           ALLDAYAL+RKKMLHNPILVSLFVVGDWVTATLSLAAASASGGVAVLFFS+LGHCSFG E
Sbjct: 61  ALLDAYALVRKKMLHNPILVSLFVVGDWVTATLSLAAASASGGVAVLFFSDLGHCSFGKE 120

Query: 121 CRKFQISVVLAFLSWITIAISALIMLWILAA 152
           CRKFQISVVLAFLSWIT+ ISALIMLWILAA
Sbjct: 121 CRKFQISVVLAFLSWITVTISALIMLWILAA 151

[Close]

BLAST of Carg10957 vs. ExPASy TrEMBL
Match: A0A5A7VDG4 (CASP-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold90G001420 PE=3 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 3.5e-69
Identity = 142/151 (94.04%), Postives = 148/151 (98.01%), Query Frame = 0


Query: 1   MLDFPGTPGTLTAFVLRILQCVFAAGSVASMATAVGFYNFTAFCYVIASMGLQVTWSFML 60
           ML FPGTPGTLT FVLRILQCVFAAGS+ASMAT+VGFYNFTAFCYVIASMGLQVTWS ML
Sbjct: 7   MLAFPGTPGTLTGFVLRILQCVFAAGSIASMATSVGFYNFTAFCYVIASMGLQVTWSLML 66

Query: 61  ALLDAYALLRKKMLHNPILVSLFVVGDWVTATLSLAAASASGGVAVLFFSNLGHCSFGDE 120
           ALLDAYAL+RKKMLHNPILVSLFVVGDWVTATLSLAAASASGGVAVLFFS+LGHCSFG+E
Sbjct: 67  ALLDAYALVRKKMLHNPILVSLFVVGDWVTATLSLAAASASGGVAVLFFSDLGHCSFGNE 126

Query: 121 CRKFQISVVLAFLSWITIAISALIMLWILAA 152
           CRKFQISVVLAFLSWIT+AISALIMLWILAA
Sbjct: 127 CRKFQISVVLAFLSWITVAISALIMLWILAA 157

[Close]

BLAST of Carg10957 vs. ExPASy TrEMBL
Match: A0A5D3CAJ7 (CASP-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1503G00480 PE=3 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 3.5e-69
Identity = 142/151 (94.04%), Postives = 148/151 (98.01%), Query Frame = 0


Query: 1   MLDFPGTPGTLTAFVLRILQCVFAAGSVASMATAVGFYNFTAFCYVIASMGLQVTWSFML 60
           ML FPGTPGTLT FVLRILQCVFAAGS+ASMAT+VGFYNFTAFCYVIASMGLQVTWS ML
Sbjct: 61  MLAFPGTPGTLTGFVLRILQCVFAAGSIASMATSVGFYNFTAFCYVIASMGLQVTWSLML 120

Query: 61  ALLDAYALLRKKMLHNPILVSLFVVGDWVTATLSLAAASASGGVAVLFFSNLGHCSFGDE 120
           ALLDAYAL+RKKMLHNPILVSLFVVGDWVTATLSLAAASASGGVAVLFFS+LGHCSFG+E
Sbjct: 121 ALLDAYALVRKKMLHNPILVSLFVVGDWVTATLSLAAASASGGVAVLFFSDLGHCSFGNE 180

Query: 121 CRKFQISVVLAFLSWITIAISALIMLWILAA 152
           CRKFQISVVLAFLSWIT+AISALIMLWILAA
Sbjct: 181 CRKFQISVVLAFLSWITVAISALIMLWILAA 211

[Close]

BLAST of Carg10957 vs. TAIR 10
Match: AT3G23200.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 202.6 bits (514), Expect = 2.3e-52
Identity = 103/151 (68.21%), Postives = 127/151 (84.11%), Query Frame = 0


Query: 1   MLDFPGTPGTLTAFVLRILQCVFAAGSVASMATAVGFYNFTAFCYVIASMGLQVTWSFML 60
           M+D PGTPGTLT  VLRI QCVFAAGS++ M T+ GF++FTAFCY+IA+MGLQV WSF L
Sbjct: 1   MIDIPGTPGTLTGLVLRISQCVFAAGSISYMVTSGGFFSFTAFCYLIAAMGLQVIWSFGL 60

Query: 61  ALLDAYALLRKKMLHNPILVSLFVVGDWVTATLSLAAASASGGVAVLFFSNLGHCSFGDE 120
           A+LD +AL+RKK L +P+LVSLFVVGDWVT+TLSLA AS+S G+ VL+F +LG CSF  E
Sbjct: 61  AILDTFALVRKKTLLSPVLVSLFVVGDWVTSTLSLAGASSSAGITVLYFGDLGSCSFEAE 120

Query: 121 CRKFQISVVLAFLSWITIAISALIMLWILAA 152
           C K+Q+SV LAFL WITIA+S+L  LW+LA+
Sbjct: 121 CWKYQLSVALAFLCWITIAVSSLTTLWLLAS 151

[Close]

BLAST of Carg10957 vs. TAIR 10
Match: AT3G53850.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 143.7 bits (361), Expect = 1.2e-34
Identity = 81/148 (54.73%), Postives = 106/148 (71.62%), Query Frame = 0


Query: 6   GTPGTLTAFVLRILQCVFAAGSVASMATAVGFYNFTAFCYVIASMGLQVTWSFMLALLDA 65
           G PGT+   +LRI QC  AA S+  M +A  F   TAFCY+IASMGLQ+ WSF LA LD 
Sbjct: 6   GGPGTVCGLLLRIGQCASAAASIGVMVSAKEFSVHTAFCYLIASMGLQLLWSFGLACLDV 65

Query: 66  YALLRKKMLHNPILVSLFVVGDWVTATLSLAAASASGGVAVLFFSNLGHCSFGDE--CRK 125
           YAL  KK L NPILVSLFVVGDWVTA LSLAAA +S GV VL+  ++ +C+   +  C +
Sbjct: 66  YALRGKKDLQNPILVSLFVVGDWVTAMLSLAAACSSAGVVVLYEKDIKYCNTQSQYPCLR 125

Query: 126 FQISVVLAFLSWITIAISALIMLWILAA 152
           ++++V L+F++WI IA+S+ +  WILA+
Sbjct: 126 YEVAVALSFVTWIQIAVSSHVTFWILAS 153

[Close]

BLAST of Carg10957 vs. TAIR 10
Match: AT5G02060.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 138.3 bits (347), Expect = 5.2e-33
Identity = 77/146 (52.74%), Postives = 100/146 (68.49%), Query Frame = 0


Query: 6   GTPGTLTAFVLRILQCVFAAGSVASMATAVGFYNFTAFCYVIASMGLQVTWSFMLALLDA 65
           G+PGT++  +LR+ QC  AA S+  M ++  F N+TAFC+++ASMGLQ+ WSF LA LD 
Sbjct: 6   GSPGTMSGLILRLGQCATAAASIGVMVSSYDFSNYTAFCFLVASMGLQLIWSFGLACLDV 65

Query: 66  YALLRKKMLHNPILVSLFVVGDWVTATLSLAAASASGGVAVLFFSNLGHCSFGD--ECRK 125
           YA+ RK  L +PIL+SLF VGDWVTA L+LAAA +S GV VLF  +   C       C +
Sbjct: 66  YAIRRKSDLRSPILLSLFTVGDWVTALLALAAACSSAGVTVLFTKDTEFCRQQPALSCDR 125

Query: 126 FQISVVLAFLSWITIAISALIMLWIL 150
           FQISV L+F +W   AIS+  M WIL
Sbjct: 126 FQISVGLSFFNWFLAAISSHTMFWIL 151

[Close]

BLAST of Carg10957 vs. TAIR 10
Match: AT2G28370.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 117.9 bits (294), Expect = 7.3e-27
Identity = 69/151 (45.70%), Postives = 94/151 (62.25%), Query Frame = 0


Query: 1   MLDFPGTPGTLTAFVLRILQCVFAAGSVASMATAVGFYNFTAFCYVIASMGLQVTWSFML 60
           M D  G PGTL    LR  Q +FAA ++  MA+   F + TAFCY++A+ GLQ  WS  L
Sbjct: 29  MDDMEGMPGTLLGLALRFFQFLFAAAALCVMASTSDFPSVTAFCYLVAATGLQSLWSLAL 88

Query: 61  ALLDAYALLRKKMLHNPILVSLFVVGDWVTATLSLAAASASGGVAVLFFSNLGHCSFGDE 120
           A++D YA++ K+ L N  LVSLF +GD VT+TL+ AAA AS G+ VL  ++L  C+  + 
Sbjct: 89  AMVDVYAIMVKRSLQNRRLVSLFAIGDGVTSTLTFAAACASAGITVLIDNDLNSCA-QNH 148

Query: 121 CRKFQISVVLAFLSWITIAISALIMLWILAA 152
           C +F+ S  LAF+SW     S L   W LA+
Sbjct: 149 CVQFETSTALAFISWFAALPSFLFNFWSLAS 178

[Close]

BLAST of Carg10957 vs. TAIR 10
Match: AT2G37200.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 105.1 bits (261), Expect = 4.9e-23
Identity = 63/150 (42.00%), Postives = 93/150 (62.00%), Query Frame = 0


Query: 1   MLDFPGTPGTLTAFVLRILQCVFAAGSVASMATAVGFYNFTAFCYVIASMGLQVTWSFML 60
           M D  G PGT    +LR+ Q V A  SV+ M T   F + TAFC ++ ++ LQ  WS  L
Sbjct: 31  MKDVQGMPGTTGGLILRLSQFVPALISVSVMVTTSDFRSATAFCCLVLAVSLQSLWSLSL 90

Query: 61  ALLDAYALLRKKMLHNPILVSLFVVGDWVTATLSLAAASASGGVAVLFFSNLGHCSFGDE 120
            ++DAYALL ++ L N  +V  F +GD VT+TL+ AAASAS G+ VL  ++LG C+  + 
Sbjct: 91  FIIDAYALLVRRSLRNHSVVQCFTIGDGVTSTLTFAAASASAGITVL-INDLGQCNV-NH 150

Query: 121 CRKFQISVVLAFLSWITIAISALIMLWILA 151
           C +F+ +  +AF+SW  ++ S ++  W LA
Sbjct: 151 CTRFETATAMAFISWFAVSPSFILNFWSLA 178

The following BLAST results are available for this feature:

BLAST of Carg10957 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022930413.1	9.8e-74	100.00	CASP-like protein 5B3 [Cucurbita moschata] >XP_023000558.1 CASP-like protein 5B3...	[more]
KAG6593844.1	9.8e-74	100.00	1-aminocyclopropane-1-carboxylate oxidase-like 1, partial [Cucurbita argyrosperm...	[more]
XP_038875242.1	2.9e-70	94.70	CASP-like protein 5B3 isoform X1 [Benincasa hispida]	[more]
XP_004142183.1	5.5e-69	93.38	CASP-like protein 5B3 isoform X1 [Cucumis sativus]	[more]
KAA0065678.1	7.2e-69	94.04	CASP-like protein 5B3 isoform X1 [Cucumis melo var. makuwa]	[more]

BLAST of Carg10957 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L7R5	3.2e-51	68.21	CASP-like protein 5B3 OS=Arabidopsis thaliana OX=3702 GN=At3g23200 PE=2 SV=1	[more]
B8BD96	3.6e-39	57.52	CASP-like protein 5B3 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_30532 PE=3 S...	[more]
Q6K478	3.6e-39	57.52	CASP-like protein 5B3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os09g0249400 P...	[more]
B6T990	9.0e-38	57.62	CASP-like protein 5B3 OS=Zea mays OX=4577 PE=2 SV=1	[more]
D5ACW4	4.9e-36	56.29	CASP-like protein 5B1 (Fragment) OS=Picea sitchensis OX=3332 PE=2 SV=2	[more]

BLAST of Carg10957 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KMZ0	4.7e-74	100.00	CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111494799 PE=3 SV=1	[more]
A0A6J1EV36	4.7e-74	100.00	CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111436867 PE=3 SV=1	[more]
A0A0A0LIJ4	2.7e-69	93.38	CASP-like protein OS=Cucumis sativus OX=3659 GN=Csa_2G179230 PE=3 SV=1	[more]
A0A5A7VDG4	3.5e-69	94.04	CASP-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold90G001...	[more]
A0A5D3CAJ7	3.5e-69	94.04	CASP-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1503G0...	[more]

BLAST of Carg10957 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G23200.1	2.3e-52	68.21	Uncharacterised protein family (UPF0497)	[more]
AT3G53850.1	1.2e-34	54.73	Uncharacterised protein family (UPF0497)	[more]
AT5G02060.1	5.2e-33	52.74	Uncharacterised protein family (UPF0497)	[more]
AT2G28370.1	7.3e-27	45.70	Uncharacterised protein family (UPF0497)	[more]
AT2G37200.1	4.9e-23	42.00	Uncharacterised protein family (UPF0497)	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006702	Casparian strip membrane protein domain	PFAM	PF04535	DUF588	coord: 8..136 e-value: 3.8E-25 score: 88.4
None	No IPR available	PANTHER	PTHR32021:SF5	CASP-LIKE PROTEIN 5B3	coord: 1..151
IPR045009	CASP-like protein 5	PANTHER	PTHR32021	CASP-LIKE PROTEIN 5B3	coord: 1..151

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg10957-RA	Carg10957-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane