Carg10950 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg10950
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	AT-hook motif nuclear-localized protein 20-like
Location	Carg_Chr08: 6470855 .. 6471436 (+)
RNA-Seq Expression	Carg10950
Synteny	Carg10950

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCACGTGATCGAGATCGCCGGAGGAGCCGACGTCGCCGACAGCATAAACCAATTTTCTCGCCGCCGGCAGCGTGGGGTTGGTGTTCTCAGCGGTAGGGGCATGGTGGACGACGTCACTCTCCGGCAATCCGCTGCTGTGATTCCACTTCATGGGCGGTTCGAGATGCCGTCTTTGACCGGCTCTTTTCTTCCCGGTCGAGCCCCTCCCGGTTCGAGCGGGCTGACCGTATACCTCGCTGGCGGGCAGGGGCAGGCGGTCGGAGGGACAGTCGTGGGACCGCTGTTGGCGGCTGGGCCTGTAGTGTTGATTGCTGCTTCTTTTGCTAATGTAACATATGAGAGATTGCCTTTAGAAAACGATCATAAAGAAGATGAGGTTTATCCGGCCACCGCAGGTAGCGGAGAAGTGGAGGCGCCGCCGTCGCTGCCGTATCCTCCGACGGTAGCTTCAATTCATGAGATGATGGTACCAAATAATCATGGGGAACACCTTGGAATTGCTGGGCATCTTTGGGCACATGGAGACCATCTCATTGATCAAACTCGAATTTCTTCAGCAATCCCAAGCGCAACAGTGTAG

mRNA sequence

ATGCACGTGATCGAGATCGCCGGAGGAGCCGACGTCGCCGACAGCATAAACCAATTTTCTCGCCGCCGGCAGCGTGGGGTTGGTGTTCTCAGCGGTAGGGGCATGGTGGACGACGTCACTCTCCGGCAATCCGCTGCTGTGATTCCACTTCATGGGCGGTTCGAGATGCCGTCTTTGACCGGCTCTTTTCTTCCCGGTCGAGCCCCTCCCGGTTCGAGCGGGCTGACCGTATACCTCGCTGGCGGGCAGGGGCAGGCGGTCGGAGGGACAGTCGTGGGACCGCTGTTGGCGGCTGGGCCTGTAGTGTTGATTGCTGCTTCTTTTGCTAATGTAACATATGAGAGATTGCCTTTAGAAAACGATCATAAAGAAGATGAGGTTTATCCGGCCACCGCAGGTAGCGGAGAAGTGGAGGCGCCGCCGTCGCTGCCGTATCCTCCGACGGTAGCTTCAATTCATGAGATGATGGTACCAAATAATCATGGGGAACACCTTGGAATTGCTGGGCATCTTTGGGCACATGGAGACCATCTCATTGATCAAACTCGAATTTCTTCAGCAATCCCAAGCGCAACAGTGTAG

Coding sequence (CDS)

ATGCACGTGATCGAGATCGCCGGAGGAGCCGACGTCGCCGACAGCATAAACCAATTTTCTCGCCGCCGGCAGCGTGGGGTTGGTGTTCTCAGCGGTAGGGGCATGGTGGACGACGTCACTCTCCGGCAATCCGCTGCTGTGATTCCACTTCATGGGCGGTTCGAGATGCCGTCTTTGACCGGCTCTTTTCTTCCCGGTCGAGCCCCTCCCGGTTCGAGCGGGCTGACCGTATACCTCGCTGGCGGGCAGGGGCAGGCGGTCGGAGGGACAGTCGTGGGACCGCTGTTGGCGGCTGGGCCTGTAGTGTTGATTGCTGCTTCTTTTGCTAATGTAACATATGAGAGATTGCCTTTAGAAAACGATCATAAAGAAGATGAGGTTTATCCGGCCACCGCAGGTAGCGGAGAAGTGGAGGCGCCGCCGTCGCTGCCGTATCCTCCGACGGTAGCTTCAATTCATGAGATGATGGTACCAAATAATCATGGGGAACACCTTGGAATTGCTGGGCATCTTTGGGCACATGGAGACCATCTCATTGATCAAACTCGAATTTCTTCAGCAATCCCAAGCGCAACAGTGTAG

Protein sequence

MHVIEIAGGADVADSINQFSRRRQRGVGVLSGRGMVDDVTLRQSAAVIPLHGRFEMPSLTGSFLPGRAPPGSSGLTVYLAGGQGQAVGGTVVGPLLAAGPVVLIAASFANVTYERLPLENDHKEDEVYPATAGSGEVEAPPSLPYPPTVASIHEMMVPNNHGEHLGIAGHLWAHGDHLIDQTRISSAIPSATV

Homology

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BLAST of Carg10950 vs. NCBI nr
Match: KAG6593851.1 (AT-hook motif nuclear-localized protein 20, partial [Cucurbita argyrosperma subsp. sororia] >KAG7026183.1 AT-hook motif nuclear-localized protein 20, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 384.4 bits (986), Expect = 5.7e-103
Identity = 193/193 (100.00%), Postives = 193/193 (100.00%), Query Frame = 0


Query: 1   MHVIEIAGGADVADSINQFSRRRQRGVGVLSGRGMVDDVTLRQSAAVIPLHGRFEMPSLT 60
           MHVIEIAGGADVADSINQFSRRRQRGVGVLSGRGMVDDVTLRQSAAVIPLHGRFEMPSLT
Sbjct: 1   MHVIEIAGGADVADSINQFSRRRQRGVGVLSGRGMVDDVTLRQSAAVIPLHGRFEMPSLT 60

Query: 61  GSFLPGRAPPGSSGLTVYLAGGQGQAVGGTVVGPLLAAGPVVLIAASFANVTYERLPLEN 120
           GSFLPGRAPPGSSGLTVYLAGGQGQAVGGTVVGPLLAAGPVVLIAASFANVTYERLPLEN
Sbjct: 61  GSFLPGRAPPGSSGLTVYLAGGQGQAVGGTVVGPLLAAGPVVLIAASFANVTYERLPLEN 120

Query: 121 DHKEDEVYPATAGSGEVEAPPSLPYPPTVASIHEMMVPNNHGEHLGIAGHLWAHGDHLID 180
           DHKEDEVYPATAGSGEVEAPPSLPYPPTVASIHEMMVPNNHGEHLGIAGHLWAHGDHLID
Sbjct: 121 DHKEDEVYPATAGSGEVEAPPSLPYPPTVASIHEMMVPNNHGEHLGIAGHLWAHGDHLID 180

Query: 181 QTRISSAIPSATV 194
           QTRISSAIPSATV
Sbjct: 181 QTRISSAIPSATV 193

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BLAST of Carg10950 vs. NCBI nr
Match: XP_023000621.1 (AT-hook motif nuclear-localized protein 20-like, partial [Cucurbita maxima])

HSP 1 Score: 320.9 bits (821), Expect = 7.8e-84
Identity = 162/178 (91.01%), Postives = 166/178 (93.26%), Query Frame = 0


Query: 2   HVIEIAGGADVADSINQFSRRRQRGVGVLSGRGMVDDVTLRQSAAVIPLHGRFEMPSLTG 61
           HVIEIAGG DVAD INQFSRRRQ GV VLSGRGMVDDVTLRQSAAVIPLHGRFEM SLTG
Sbjct: 96  HVIEIAGGDDVADIINQFSRRRQCGVCVLSGRGMVDDVTLRQSAAVIPLHGRFEMLSLTG 155

Query: 62  SFLPGRAPPGSSGLTVYLAGGQGQAVGGTVVGPLLAAGPVVLIAASFANVTYERLPLEND 121
           SFLPGRA PGSSGLTVYLAGGQGQ +GGTVVGPLLA+GPVVLIAASFAN  YERLP END
Sbjct: 156 SFLPGRAAPGSSGLTVYLAGGQGQVIGGTVVGPLLASGPVVLIAASFANAIYERLPSEND 215

Query: 122 HKEDEVYPATAGSGEVEAPPSLPYPPTVASIHEMMVPNNHGEHLGIAGHLWAHGDHLI 180
           HKEDEVYPATAGSGEVEAPPSLPYP TVASIHEMMVPNNHGEHLGI GHLWAHGD+L+
Sbjct: 216 HKEDEVYPATAGSGEVEAPPSLPYPLTVASIHEMMVPNNHGEHLGIGGHLWAHGDNLV 273

[Close]

BLAST of Carg10950 vs. NCBI nr
Match: XP_023514449.1 (AT-hook motif nuclear-localized protein 20-like, partial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 266.2 bits (679), Expect = 2.3e-67
Identity = 139/147 (94.56%), Postives = 140/147 (95.24%), Query Frame = 0


Query: 1   MHVIEIAGGADVADSINQFSRRRQRGVGVLSGRGMVDDVTLRQSAAVIPLHGRFEMPSLT 60
           MHVIEIAGGADVADSINQFSRRRQRGV VLSGRGMVDDVTLR SAAVIPLHGRF+M SLT
Sbjct: 96  MHVIEIAGGADVADSINQFSRRRQRGVCVLSGRGMVDDVTLRLSAAVIPLHGRFDMLSLT 155

Query: 61  GSFLPGRAPPGSSGLTVYLAGGQGQAVGGTVVGPLLAAGPVVLIAASFANVTYERLPLEN 120
           GSFLPGRAPPGSSGLTV LAGGQGQ V GTVVGPLLAAGPVVLIAASFA VTYERLPLEN
Sbjct: 156 GSFLPGRAPPGSSGLTVNLAGGQGQVVRGTVVGPLLAAGPVVLIAASFAIVTYERLPLEN 215

Query: 121 DHKEDEVYPATAGSGEVEAPPSLPYPP 148
           DHKEDEVYPATAGSGEVEAPPSLPYPP
Sbjct: 216 DHKEDEVYPATAGSGEVEAPPSLPYPP 242

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BLAST of Carg10950 vs. NCBI nr
Match: XP_038875026.1 (AT-hook motif nuclear-localized protein 20-like [Benincasa hispida])

HSP 1 Score: 235.7 bits (600), Expect = 3.3e-58
Identity = 127/178 (71.35%), Postives = 145/178 (81.46%), Query Frame = 0


Query: 2   HVIEIAGGADVADSINQFSRRRQRGVGVLSGRGMVDDVTLRQ---SAAVIPLHGRFEMPS 61
           HVIEI GGADVADSINQFS R+QRGV VLSGRG V DVTLRQ   SAAVI LHGRFE+ S
Sbjct: 100 HVIEIVGGADVADSINQFSNRQQRGVCVLSGRGTVVDVTLRQSAASAAVIQLHGRFEILS 159

Query: 62  LTGSFLPGRAPPGSSGLTVYLAGGQGQAVGGTVVGPLLAAGPVVLIAASFANVTYERLPL 121
           L+GSFLPGRAPPGS+GLTVY+AGGQGQ +GGTVVGPLLAAGP++LIAA+FAN TYERLPL
Sbjct: 160 LSGSFLPGRAPPGSTGLTVYMAGGQGQVIGGTVVGPLLAAGPIILIAATFANATYERLPL 219

Query: 122 END--HKEDEVYPATAGSGEVEAPPSLPYPPTVASIHEMMVPNNHGEHLGIAGHLWAH 175
           ++D  ++E EV PAT   GEVE PP  PYP    SI++++ PNN   H GI G+ WAH
Sbjct: 220 QDDLNYQEKEVSPATTCGGEVEEPP--PYPRMATSIYDLVAPNN---HQGIDGYAWAH 272

[Close]

BLAST of Carg10950 vs. NCBI nr
Match: KAG6574929.1 (AT-hook motif nuclear-localized protein 20, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 218.0 bits (554), Expect = 7.1e-53
Identity = 120/165 (72.73%), Postives = 132/165 (80.00%), Query Frame = 0


Query: 2   HVIEIAGGADVADSINQFSRRRQRGVGVLSGRGMVDDVTLRQSAAVIPLHGRFEMPSLTG 61
           HVIEIAGGADVADSINQFS RRQRGV VLSG G V DVTLRQSA VI LHG F++ SL+G
Sbjct: 85  HVIEIAGGADVADSINQFSSRRQRGVCVLSGNGTVADVTLRQSATVIQLHGLFDILSLSG 144

Query: 62  SFLPGRAPPGSSGLTVYLAGGQGQAVGGTVVGPLLAAGPVVLIAASFANVTYERLPLEND 121
           SFLPG A P S+ LTVYLAGGQGQ VGGTVVGPLLAAGPV+LIAA+FAN  YERLPL++D
Sbjct: 145 SFLPGPAIPCSTRLTVYLAGGQGQVVGGTVVGPLLAAGPVILIAATFANAIYERLPLQDD 204

Query: 122 H--KEDEVYPATAGSGEVEAPP-SLPYPPTVASIHEMMVPNNHGE 164
           H  +E EV PA   SGEVE PP   PYP T  SI+++M PNN  E
Sbjct: 205 HDYQETEVSPAAIDSGEVEEPPLPPPYPRTTTSIYDLMTPNNDHE 249

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BLAST of Carg10950 vs. ExPASy Swiss-Prot
Match: O22130 (AT-hook motif nuclear-localized protein 22 OS=Arabidopsis thaliana OX=3702 GN=AHL22 PE=1 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 9.3e-40
Identity = 84/140 (60.00%), Postives = 107/140 (76.43%), Query Frame = 0


Query: 2   HVIEIAGGADVADSINQFSRRRQRGVGVLSGRGMVDDVTLRQSA-------AVIPLHGRF 61
           HV+E+A G DV +S+  F+RRRQRG+ VLSG G V +VT+RQ A       +V+ LHGRF
Sbjct: 119 HVMEVANGCDVMESVTVFARRRQRGICVLSGNGAVTNVTIRQPASVPGGGSSVVNLHGRF 178

Query: 62  EMPSLTGSFLPGRAPPGSSGLTVYLAGGQGQAVGGTVVGPLLAAGPVVLIAASFANVTYE 121
           E+ SL+GSFLP  APP +SGLT+YLAGGQGQ VGG+VVGPL+A+GPVV++AASF N  YE
Sbjct: 179 EILSLSGSFLPPPAPPAASGLTIYLAGGQGQVVGGSVVGPLMASGPVVIMAASFGNAAYE 238

Query: 122 RLPLENDHKEDEVYPATAGS 135
           RLPLE D +E++   A A +
Sbjct: 239 RLPLEEDDQEEQTAGAVANN 258

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BLAST of Carg10950 vs. ExPASy Swiss-Prot
Match: Q9SR17 (AT-hook motif nuclear-localized protein 19 OS=Arabidopsis thaliana OX=3702 GN=AHL19 PE=2 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 2.1e-39
Identity = 89/145 (61.38%), Postives = 107/145 (73.79%), Query Frame = 0


Query: 2   HVIEIAGGADVADSINQFSRRRQRGVGVLSGRGMVDDVTLRQ-----------SAAVIPL 61
           HV+EIA G DV +++  F+RRRQRG+ +LSG G V +VTLRQ            AAV+ L
Sbjct: 110 HVMEIASGTDVIETLATFARRRQRGICILSGNGTVANVTLRQPSTAAVAAAPGGAAVLAL 169

Query: 62  HGRFEMPSLTGSFLPGRAPPGSSGLTVYLAGGQGQAVGGTVVGPLLAAGPVVLIAASFAN 121
            GRFE+ SLTGSFLPG APPGS+GLT+YLAGGQGQ VGG+VVGPL+AAGPV+LIAA+F+N
Sbjct: 170 QGRFEILSLTGSFLPGPAPPGSTGLTIYLAGGQGQVVGGSVVGPLMAAGPVMLIAATFSN 229

Query: 122 VTYERLPLENDHKEDEVYPATAGSG 136
            TYERLPLE    E+E      G G
Sbjct: 230 ATYERLPLE----EEEAAERGGGGG 250

[Close]

BLAST of Carg10950 vs. ExPASy Swiss-Prot
Match: Q8GWQ2 (AT-hook motif nuclear-localized protein 20 OS=Arabidopsis thaliana OX=3702 GN=AHL20 PE=2 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 3.5e-39
Identity = 99/184 (53.80%), Postives = 130/184 (70.65%), Query Frame = 0


Query: 2   HVIEIAGGADVADSINQFSRRRQRGVGVLSGRGMVDDVTLRQSAA---VIPLHGRFEMPS 61
           HV+EI+ G+DVAD+I  FSRRRQRGV VLSG G V +VTLRQ+AA   V+ L GRFE+ S
Sbjct: 97  HVLEISDGSDVADTIAHFSRRRQRGVCVLSGTGSVANVTLRQAAAPGGVVSLQGRFEILS 156

Query: 62  LTGSFLPGRAPPGSSGLTVYLAGGQGQAVGGTVVGPLLAAGPVVLIAASFANVTYERLPL 121
           LTG+FLPG +PPGS+GLTVYLAG QGQ VGG+VVGPLLA G V++IAA+F+N TYERLP+
Sbjct: 157 LTGAFLPGPSPPGSTGLTVYLAGVQGQVVGGSVVGPLLAIGSVMVIAATFSNATYERLPM 216

Query: 122 ENDHKEDEVYPATAGSGEVEAPP----SLPYPPTVA----SIHEMMVPNNHGEHLGIAGH 175
           E   +E++   +    G  ++PP    +LP    +A    ++   ++PN  G+ LG   +
Sbjct: 217 E---EEEDGGGSRQIHGGGDSPPRIGSNLPDLSGMAGPGYNMPPHLIPNGAGQ-LGHEPY 276

[Close]

BLAST of Carg10950 vs. ExPASy Swiss-Prot
Match: O49662 (AT-hook motif nuclear-localized protein 24 OS=Arabidopsis thaliana OX=3702 GN=AHL24 PE=2 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 3.5e-39
Identity = 90/168 (53.57%), Postives = 116/168 (69.05%), Query Frame = 0


Query: 2   HVIEIAGGADVADSINQFSRRRQRGVGVLSGRGMVDDVTLRQ------SAAVIPLHGRFE 61
           HV+EI  G D+ +S+  F+RRRQRGV V+SG G V +VT+RQ        +V+ LHGRFE
Sbjct: 135 HVMEIGDGCDLVESVATFARRRQRGVCVMSGTGNVTNVTIRQPGSHPSPGSVVSLHGRFE 194

Query: 62  MPSLTGSFLPGRAPPGSSGLTVYLAGGQGQAVGGTVVGPLLAAGPVVLIAASFANVTYER 121
           + SL+GSFLP  APP ++GL+VYLAGGQGQ VGG+VVGPLL AGPVV++AASF+N  YER
Sbjct: 195 ILSLSGSFLPPPAPPTATGLSVYLAGGQGQVVGGSVVGPLLCAGPVVVMAASFSNAAYER 254

Query: 122 LPLENDHKEDEVYPATAGSGEVEAPP----SLPYPPTVASIHEMMVPN 160
           LPLE D  +  V+    G G +E+PP     L +     S H+ + PN
Sbjct: 255 LPLEEDEMQTPVH-GGGGGGSLESPPMMGQQLQHQQQAMSGHQGLPPN 301

[Close]

BLAST of Carg10950 vs. ExPASy Swiss-Prot
Match: Q9SZ70 (AT-hook motif nuclear-localized protein 26 OS=Arabidopsis thaliana OX=3702 GN=AHL26 PE=2 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 7.4e-37
Identity = 84/158 (53.16%), Postives = 110/158 (69.62%), Query Frame = 0


Query: 2   HVIEIAGGADVADSINQFSRRRQRGVGVLSGRGMVDDVTLRQ----SAAVIPLHGRFEMP 61
           HV+EI  G D+ D +  F+RRRQRGV V+SG G V +VT+RQ      +V+ LHGRFE+ 
Sbjct: 148 HVMEIGDGCDIVDCMATFARRRQRGVCVMSGTGSVTNVTIRQPGSPPGSVVSLHGRFEIL 207

Query: 62  SLTGSFLPGRAPPGSSGLTVYLAGGQGQAVGGTVVGPLLAAGPVVLIAASFANVTYERLP 121
           SL+GSFLP  APP ++GL+VYLAGGQGQ VGG+VVGPLL +GPVV++AASF+N  YERLP
Sbjct: 208 SLSGSFLPPPAPPAATGLSVYLAGGQGQVVGGSVVGPLLCSGPVVVMAASFSNAAYERLP 267

Query: 122 LENDHKEDEVY---PATAGSGEVEAPPSLPYPPTVASI 153
           LE D  +  V        G G + +PP +     +A++
Sbjct: 268 LEEDEMQTPVQGGGGGGGGGGGMGSPPMMGQQQAMAAM 305

[Close]

BLAST of Carg10950 vs. ExPASy TrEMBL
Match: A0A6J1KGB6 (AT-hook motif nuclear-localized protein 20-like OS=Cucurbita maxima OX=3661 GN=LOC111494863 PE=4 SV=1)

HSP 1 Score: 320.9 bits (821), Expect = 3.8e-84
Identity = 162/178 (91.01%), Postives = 166/178 (93.26%), Query Frame = 0


Query: 2   HVIEIAGGADVADSINQFSRRRQRGVGVLSGRGMVDDVTLRQSAAVIPLHGRFEMPSLTG 61
           HVIEIAGG DVAD INQFSRRRQ GV VLSGRGMVDDVTLRQSAAVIPLHGRFEM SLTG
Sbjct: 96  HVIEIAGGDDVADIINQFSRRRQCGVCVLSGRGMVDDVTLRQSAAVIPLHGRFEMLSLTG 155

Query: 62  SFLPGRAPPGSSGLTVYLAGGQGQAVGGTVVGPLLAAGPVVLIAASFANVTYERLPLEND 121
           SFLPGRA PGSSGLTVYLAGGQGQ +GGTVVGPLLA+GPVVLIAASFAN  YERLP END
Sbjct: 156 SFLPGRAAPGSSGLTVYLAGGQGQVIGGTVVGPLLASGPVVLIAASFANAIYERLPSEND 215

Query: 122 HKEDEVYPATAGSGEVEAPPSLPYPPTVASIHEMMVPNNHGEHLGIAGHLWAHGDHLI 180
           HKEDEVYPATAGSGEVEAPPSLPYP TVASIHEMMVPNNHGEHLGI GHLWAHGD+L+
Sbjct: 216 HKEDEVYPATAGSGEVEAPPSLPYPLTVASIHEMMVPNNHGEHLGIGGHLWAHGDNLV 273

[Close]

BLAST of Carg10950 vs. ExPASy TrEMBL
Match: A0A5D3C9P2 (AT-hook motif nuclear-localized protein 20-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1503G00340 PE=4 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 1.7e-52
Identity = 118/179 (65.92%), Postives = 139/179 (77.65%), Query Frame = 0


Query: 2   HVIEIAGGADVADSINQFSRRRQRGVGVLSGRGMVDDVTLRQ---SAAVIPLHGRFEMPS 61
           H+IEI GGADVA+SINQF  RRQRGV VLSG G V DVTLRQ   SAAVI L GRFE+ S
Sbjct: 73  HLIEIVGGADVAESINQFCCRRQRGVCVLSGSGTVVDVTLRQSAASAAVIQLRGRFEILS 132

Query: 62  LTGSFLPGRAPPGSSGLTVYLAGGQGQAVGGTVVGPLLAAGPVVLIAASFANVTYERLPL 121
           ++GSFLPGRAPPGS+GLTVYLAGGQGQ +GGTVVGPLLA GPV+L+AA+FAN TYERLPL
Sbjct: 133 VSGSFLPGRAPPGSTGLTVYLAGGQGQVIGGTVVGPLLAGGPVMLVAATFANATYERLPL 192

Query: 122 ENDH--KEDEVYPATAGSGEV-EAPPSLPYPPTVASIHEMMVPNNHGEHLGIAGHLWAH 175
           ++ H  +E E  PA   +GEV E PP  PYP    SI++++ PNN+    G+ G+ WAH
Sbjct: 193 QDHHNCEEREASPAATSAGEVEEPPPPPPYPRMETSIYDLIAPNNNH---GLDGYAWAH 248

[Close]

BLAST of Carg10950 vs. ExPASy TrEMBL
Match: A0A1S3CCN1 (AT-hook motif nuclear-localized protein 20-like OS=Cucumis melo OX=3656 GN=LOC103499492 PE=4 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 1.7e-52
Identity = 118/179 (65.92%), Postives = 139/179 (77.65%), Query Frame = 0


Query: 2   HVIEIAGGADVADSINQFSRRRQRGVGVLSGRGMVDDVTLRQ---SAAVIPLHGRFEMPS 61
           H+IEI GGADVA+SINQF  RRQRGV VLSG G V DVTLRQ   SAAVI L GRFE+ S
Sbjct: 102 HLIEIVGGADVAESINQFCCRRQRGVCVLSGSGTVVDVTLRQSAASAAVIQLRGRFEILS 161

Query: 62  LTGSFLPGRAPPGSSGLTVYLAGGQGQAVGGTVVGPLLAAGPVVLIAASFANVTYERLPL 121
           ++GSFLPGRAPPGS+GLTVYLAGGQGQ +GGTVVGPLLA GPV+L+AA+FAN TYERLPL
Sbjct: 162 VSGSFLPGRAPPGSTGLTVYLAGGQGQVIGGTVVGPLLAGGPVMLVAATFANATYERLPL 221

Query: 122 ENDH--KEDEVYPATAGSGEV-EAPPSLPYPPTVASIHEMMVPNNHGEHLGIAGHLWAH 175
           ++ H  +E E  PA   +GEV E PP  PYP    SI++++ PNN+    G+ G+ WAH
Sbjct: 222 QDHHNCEEREASPAATSAGEVEEPPPPPPYPRMETSIYDLIAPNNNH---GLDGYAWAH 277

[Close]

BLAST of Carg10950 vs. ExPASy TrEMBL
Match: A0A0A0LKP1 (PPC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G190760 PE=4 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 2.2e-52
Identity = 118/178 (66.29%), Postives = 138/178 (77.53%), Query Frame = 0


Query: 2   HVIEIAGGADVADSINQFSRRRQRGVGVLSGRGMVDDVTLRQSA---AVIPLHGRFEMPS 61
           HVIEI GGADVADSINQF  RRQRGV VLSG G V DVT+RQSA   AVI L GRFE+ S
Sbjct: 105 HVIEIVGGADVADSINQFCCRRQRGVCVLSGSGTVVDVTVRQSAGSGAVIQLRGRFEILS 164

Query: 62  LTGSFLPGRAPPGSSGLTVYLAGGQGQAVGGTVVGPLLAAGPVVLIAASFANVTYERLPL 121
           ++GSFLPGR PP S+GLTVYLAGGQGQ +GGTVVGPLLA GPV+LIAA+FAN TYERLPL
Sbjct: 165 VSGSFLPGRDPPCSTGLTVYLAGGQGQVIGGTVVGPLLAGGPVILIAATFANATYERLPL 224

Query: 122 ENDH--KEDEVYPATAGSGEVEAPPSLPYPPTVASIHEMMVPNNHGEHLGIAGHLWAH 175
           ++ H  +E EV PAT  +GE+E P  LPYP    SI++++ PNN+  H  + G+ W H
Sbjct: 225 QHHHNYEEREVSPATTSAGELEEP--LPYPRIETSIYDLIPPNNNNNH-ALDGYAWTH 279

[Close]

BLAST of Carg10950 vs. ExPASy TrEMBL
Match: A0A6J1H4F5 (AT-hook motif nuclear-localized protein 20-like OS=Cucurbita moschata OX=3662 GN=LOC111459949 PE=4 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 2.2e-52
Identity = 118/165 (71.52%), Postives = 131/165 (79.39%), Query Frame = 0


Query: 2   HVIEIAGGADVADSINQFSRRRQRGVGVLSGRGMVDDVTLRQSAAVIPLHGRFEMPSLTG 61
           HVIEIAGGADVADSINQFS RRQRGV VLSG G V DVTLRQSA VI LHG F++ SL+G
Sbjct: 98  HVIEIAGGADVADSINQFSSRRQRGVCVLSGNGTVADVTLRQSATVIQLHGLFDILSLSG 157

Query: 62  SFLPGRAPPGSSGLTVYLAGGQGQAVGGTVVGPLLAAGPVVLIAASFANVTYERLPLEND 121
           SFLPG A P S+ LTVYLAGGQGQ VGGTVVGPLLAAGPV+LIAA+FAN  YERLPL++D
Sbjct: 158 SFLPGPAIPCSTRLTVYLAGGQGQVVGGTVVGPLLAAGPVILIAATFANAIYERLPLQDD 217

Query: 122 H--KEDEVYPATAGSGEVEAPP-SLPYPPTVASIHEMMVPNNHGE 164
           H  ++ EV PA    GEVE PP   PYP T  SI+++M PNN  E
Sbjct: 218 HDYQQTEVSPAAIDGGEVEEPPLPPPYPRTTTSIYDLMTPNNDHE 262

[Close]

BLAST of Carg10950 vs. TAIR 10
Match: AT2G45430.1 (AT-hook motif nuclear-localized protein 22 )

HSP 1 Score: 164.9 bits (416), Expect = 6.6e-41
Identity = 84/140 (60.00%), Postives = 107/140 (76.43%), Query Frame = 0


Query: 2   HVIEIAGGADVADSINQFSRRRQRGVGVLSGRGMVDDVTLRQSA-------AVIPLHGRF 61
           HV+E+A G DV +S+  F+RRRQRG+ VLSG G V +VT+RQ A       +V+ LHGRF
Sbjct: 119 HVMEVANGCDVMESVTVFARRRQRGICVLSGNGAVTNVTIRQPASVPGGGSSVVNLHGRF 178

Query: 62  EMPSLTGSFLPGRAPPGSSGLTVYLAGGQGQAVGGTVVGPLLAAGPVVLIAASFANVTYE 121
           E+ SL+GSFLP  APP +SGLT+YLAGGQGQ VGG+VVGPL+A+GPVV++AASF N  YE
Sbjct: 179 EILSLSGSFLPPPAPPAASGLTIYLAGGQGQVVGGSVVGPLMASGPVVIMAASFGNAAYE 238

Query: 122 RLPLENDHKEDEVYPATAGS 135
           RLPLE D +E++   A A +
Sbjct: 239 RLPLEEDDQEEQTAGAVANN 258

[Close]

BLAST of Carg10950 vs. TAIR 10
Match: AT3G04570.1 (AT-hook motif nuclear-localized protein 19 )

HSP 1 Score: 163.7 bits (413), Expect = 1.5e-40
Identity = 89/145 (61.38%), Postives = 107/145 (73.79%), Query Frame = 0


Query: 2   HVIEIAGGADVADSINQFSRRRQRGVGVLSGRGMVDDVTLRQ-----------SAAVIPL 61
           HV+EIA G DV +++  F+RRRQRG+ +LSG G V +VTLRQ            AAV+ L
Sbjct: 110 HVMEIASGTDVIETLATFARRRQRGICILSGNGTVANVTLRQPSTAAVAAAPGGAAVLAL 169

Query: 62  HGRFEMPSLTGSFLPGRAPPGSSGLTVYLAGGQGQAVGGTVVGPLLAAGPVVLIAASFAN 121
            GRFE+ SLTGSFLPG APPGS+GLT+YLAGGQGQ VGG+VVGPL+AAGPV+LIAA+F+N
Sbjct: 170 QGRFEILSLTGSFLPGPAPPGSTGLTIYLAGGQGQVVGGSVVGPLMAAGPVMLIAATFSN 229

Query: 122 VTYERLPLENDHKEDEVYPATAGSG 136
            TYERLPLE    E+E      G G
Sbjct: 230 ATYERLPLE----EEEAAERGGGGG 250

[Close]

BLAST of Carg10950 vs. TAIR 10
Match: AT4G22810.1 (Predicted AT-hook DNA-binding family protein )

HSP 1 Score: 162.9 bits (411), Expect = 2.5e-40
Identity = 90/168 (53.57%), Postives = 116/168 (69.05%), Query Frame = 0


Query: 2   HVIEIAGGADVADSINQFSRRRQRGVGVLSGRGMVDDVTLRQ------SAAVIPLHGRFE 61
           HV+EI  G D+ +S+  F+RRRQRGV V+SG G V +VT+RQ        +V+ LHGRFE
Sbjct: 135 HVMEIGDGCDLVESVATFARRRQRGVCVMSGTGNVTNVTIRQPGSHPSPGSVVSLHGRFE 194

Query: 62  MPSLTGSFLPGRAPPGSSGLTVYLAGGQGQAVGGTVVGPLLAAGPVVLIAASFANVTYER 121
           + SL+GSFLP  APP ++GL+VYLAGGQGQ VGG+VVGPLL AGPVV++AASF+N  YER
Sbjct: 195 ILSLSGSFLPPPAPPTATGLSVYLAGGQGQVVGGSVVGPLLCAGPVVVMAASFSNAAYER 254

Query: 122 LPLENDHKEDEVYPATAGSGEVEAPP----SLPYPPTVASIHEMMVPN 160
           LPLE D  +  V+    G G +E+PP     L +     S H+ + PN
Sbjct: 255 LPLEEDEMQTPVH-GGGGGGSLESPPMMGQQLQHQQQAMSGHQGLPPN 301

[Close]

BLAST of Carg10950 vs. TAIR 10
Match: AT4G14465.1 (AT-hook motif nuclear-localized protein 20 )

HSP 1 Score: 162.9 bits (411), Expect = 2.5e-40
Identity = 99/184 (53.80%), Postives = 130/184 (70.65%), Query Frame = 0


Query: 2   HVIEIAGGADVADSINQFSRRRQRGVGVLSGRGMVDDVTLRQSAA---VIPLHGRFEMPS 61
           HV+EI+ G+DVAD+I  FSRRRQRGV VLSG G V +VTLRQ+AA   V+ L GRFE+ S
Sbjct: 97  HVLEISDGSDVADTIAHFSRRRQRGVCVLSGTGSVANVTLRQAAAPGGVVSLQGRFEILS 156

Query: 62  LTGSFLPGRAPPGSSGLTVYLAGGQGQAVGGTVVGPLLAAGPVVLIAASFANVTYERLPL 121
           LTG+FLPG +PPGS+GLTVYLAG QGQ VGG+VVGPLLA G V++IAA+F+N TYERLP+
Sbjct: 157 LTGAFLPGPSPPGSTGLTVYLAGVQGQVVGGSVVGPLLAIGSVMVIAATFSNATYERLPM 216

Query: 122 ENDHKEDEVYPATAGSGEVEAPP----SLPYPPTVA----SIHEMMVPNNHGEHLGIAGH 175
           E   +E++   +    G  ++PP    +LP    +A    ++   ++PN  G+ LG   +
Sbjct: 217 E---EEEDGGGSRQIHGGGDSPPRIGSNLPDLSGMAGPGYNMPPHLIPNGAGQ-LGHEPY 276

[Close]

BLAST of Carg10950 vs. TAIR 10
Match: AT4G12050.1 (Predicted AT-hook DNA-binding family protein )

HSP 1 Score: 155.2 bits (391), Expect = 5.2e-38
Identity = 84/158 (53.16%), Postives = 110/158 (69.62%), Query Frame = 0


Query: 2   HVIEIAGGADVADSINQFSRRRQRGVGVLSGRGMVDDVTLRQ----SAAVIPLHGRFEMP 61
           HV+EI  G D+ D +  F+RRRQRGV V+SG G V +VT+RQ      +V+ LHGRFE+ 
Sbjct: 148 HVMEIGDGCDIVDCMATFARRRQRGVCVMSGTGSVTNVTIRQPGSPPGSVVSLHGRFEIL 207

Query: 62  SLTGSFLPGRAPPGSSGLTVYLAGGQGQAVGGTVVGPLLAAGPVVLIAASFANVTYERLP 121
           SL+GSFLP  APP ++GL+VYLAGGQGQ VGG+VVGPLL +GPVV++AASF+N  YERLP
Sbjct: 208 SLSGSFLPPPAPPAATGLSVYLAGGQGQVVGGSVVGPLLCSGPVVVMAASFSNAAYERLP 267

Query: 122 LENDHKEDEVY---PATAGSGEVEAPPSLPYPPTVASI 153
           LE D  +  V        G G + +PP +     +A++
Sbjct: 268 LEEDEMQTPVQGGGGGGGGGGGMGSPPMMGQQQAMAAM 305

The following BLAST results are available for this feature:

BLAST of Carg10950 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6593851.1	5.7e-103	100.00	AT-hook motif nuclear-localized protein 20, partial [Cucurbita argyrosperma subs...	[more]
XP_023000621.1	7.8e-84	91.01	AT-hook motif nuclear-localized protein 20-like, partial [Cucurbita maxima]	[more]
XP_023514449.1	2.3e-67	94.56	AT-hook motif nuclear-localized protein 20-like, partial [Cucurbita pepo subsp. ...	[more]
XP_038875026.1	3.3e-58	71.35	AT-hook motif nuclear-localized protein 20-like [Benincasa hispida]	[more]
KAG6574929.1	7.1e-53	72.73	AT-hook motif nuclear-localized protein 20, partial [Cucurbita argyrosperma subs...	[more]

BLAST of Carg10950 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O22130	9.3e-40	60.00	AT-hook motif nuclear-localized protein 22 OS=Arabidopsis thaliana OX=3702 GN=AH...	[more]
Q9SR17	2.1e-39	61.38	AT-hook motif nuclear-localized protein 19 OS=Arabidopsis thaliana OX=3702 GN=AH...	[more]
Q8GWQ2	3.5e-39	53.80	AT-hook motif nuclear-localized protein 20 OS=Arabidopsis thaliana OX=3702 GN=AH...	[more]
O49662	3.5e-39	53.57	AT-hook motif nuclear-localized protein 24 OS=Arabidopsis thaliana OX=3702 GN=AH...	[more]
Q9SZ70	7.4e-37	53.16	AT-hook motif nuclear-localized protein 26 OS=Arabidopsis thaliana OX=3702 GN=AH...	[more]

BLAST of Carg10950 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KGB6	3.8e-84	91.01	AT-hook motif nuclear-localized protein 20-like OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A5D3C9P2	1.7e-52	65.92	AT-hook motif nuclear-localized protein 20-like OS=Cucumis melo var. makuwa OX=1...	[more]
A0A1S3CCN1	1.7e-52	65.92	AT-hook motif nuclear-localized protein 20-like OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A0A0LKP1	2.2e-52	66.29	PPC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G190760 PE=4 SV...	[more]
A0A6J1H4F5	2.2e-52	71.52	AT-hook motif nuclear-localized protein 20-like OS=Cucurbita moschata OX=3662 GN...	[more]

BLAST of Carg10950 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G45430.1	6.6e-41	60.00	AT-hook motif nuclear-localized protein 22	[more]
AT3G04570.1	1.5e-40	61.38	AT-hook motif nuclear-localized protein 19	[more]
AT4G22810.1	2.5e-40	53.57	Predicted AT-hook DNA-binding family protein	[more]
AT4G14465.1	2.5e-40	53.80	AT-hook motif nuclear-localized protein 20	[more]
AT4G12050.1	5.2e-38	53.16	Predicted AT-hook DNA-binding family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005175	PPC domain	PFAM	PF03479	PCC	coord: 2..109 e-value: 3.1E-24 score: 85.5
IPR005175	PPC domain	PROSITE	PS51742	PPC	coord: 1..130 score: 30.464302
IPR005175	PPC domain	CDD	cd11378	DUF296	coord: 1..108 e-value: 6.03651E-15 score: 65.6846
None	No IPR available	GENE3D	3.30.1330.80		coord: 1..127 e-value: 4.8E-18 score: 67.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 122..142
None	No IPR available	PANTHER	PTHR31100:SF58	DNA-BINDING PROTEIN-LIKE	coord: 2..159
None	No IPR available	SUPERFAMILY	117856	AF0104/ALDC/Ptd012-like	coord: 1..120
IPR014476	AT-hook motif nuclear-localized protein 15-29	PANTHER	PTHR31100	AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15	coord: 2..159

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg10950-RA	Carg10950-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0050789	regulation of biological process
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0003680	minor groove of adenine-thymine-rich DNA binding