Carg10911 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg10911
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Tetratricopeptide repeat (TPR)-like superfamily protein
Location	Carg_Chr05: 11405805 .. 11408441 (-)
RNA-Seq Expression	Carg10911
Synteny	Carg10911

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGAGAGAAAGAGGGTTTTGTGGAATCCTAAAACCCTTTTCTTCTTCGTTCCCTCACAAGCTTCGATCGTTAATCATGCTTCTCAGAAGTGCGTCGACCTCAATTCTCAATCCATGGAAACCCCATTTGAAAGAAGCTTCCATGGAGGCCGAAATCGTCCACCAAATTCCTAAATCACGGTCCCTCACACTCTGTGCTTCTTCGAAATTGTTGCCGCCGCCGCCGATGATTGGTGGACCGGCGATTAACATGATGCGGACCCTCTCTGTGCCTGATCTGAGTAACCTCTCGGCGGTGGCGAAGAGGAGTCCGTTTTTGGATGGGGGATTGTGCTGTGGTGTTGCCGAAGTCGGGGAGAGTTCCGATTGCGGTGGCGGGATGGTCGGTGTTTCGGTTGATGGAGGAATCGGCTGCGATGGTTGCGGTGGCGATGGTGGTGGTTCGGATGGTGGCGATGATGGCTGCTTTGGTTCTTGGGATGCGGATCGTGAGAACGATTGGGCGGATCTGTATTATCAGAAAATGATAGAAGCGAATCCAGAGAATTCGTTGTTACTAAGCAATTATGCTCGATTCTTGATGGAGGTACATGATTTTAACATTGAAATCCCATCTTCTTTAATTTCTTGAAATTCTTTACAGTACATTTGGTTCTGTTTATTGCGTTTTGTTTGGTTCCTGAAGGAAATGATCCTTTGTTCTTCTCTGTTAAGTACGGAAATGAAAATCTCGCAAAATCTTGTTCTGATCCTTTACCATTGCCTGAACTGATGCTATTTTGAAGATCTTTAATCTGCTTTTGTTTCTTACAACTGTTGGCTTAGAATAGACCTGATGTGAAACACTGGAAGATGAACAGAGTGGATTTTAGGAATCAATTTGTGTTTAGAAAAATACCCAATAAAGCTGATAATATCTTGTTAGCATCTTTTAAAAGTTGTCCTCCCTTCGATTATGGCTCAAAGGGAAGCGTTTTTCATTGCAAAACTATGTTCTTGTTCTTGGTAAAAAGAAAAAAAAAAAAAAAAAACTAAGTATTAGATTTAGTCCTCGAGCTTATAGTTTACATCAAATTAAGTGTTTAAACTTCACTTTGTCCTTGGATGTCACGGTCATGCTCGTTTAGGGTGTGTTGCTCATGGCTGCATGCCCATGCCACACCGAACCCTTTATATTATTCCACTTGTATTGATTTACGAAATCATGTCTATGTCTGCTAAACTTGAATTGCCCCAAAATGTACTATAGGGGGAGTGACTAGTTGTCAACTCCTCTCCTTAATTTTGATTGACTGTTTGGTGAAATCACACTTAGGTCTGTCAGACCTGAATCGCCTCAAAATGTACTAAAGGGGGATGCGACTAGTTGTCAAATTCTCCCTATCCGGAAAAGTTATCAAGTTATATGCTAATGCTTCTTAACAATTCTCATTAACACTTCTTCTAAGTCCATTTGGACCAGGATTGTCCACATTTTAGCTTACCATAATAAAACTAGCACCGGGATCCAAAAGTGGTACTGTGCTTTTCACAATTACCATACCCATGAGATCTCAACGAACGAACTAATGAACAGAATGACTTATGTGGACAATGAGTTATTTCTACTATGTTCAACTTAGTTTGTAACAATTTGGTCCTTGAACTATAGTTTACAGTTCGACCTTTGAACTTTAGTTAGTAACAATTTGATCTCTAATCAATTTATTGATCGATACTGTTCTGTATTAAAGTTGAGAAAGTTAATTGGACTAAATCTTTACCAACTAAAGTTTAGGACTGAATTGTTACTCGGAAGAACGAATAAATCAAAGAAGTGTTCTTCAACCATTGTTTTCTTTTTATACAGAAGTTGTTACATGAATGTGGAATGCCTTTGGTAAAAGCTTGTGGTTAATCCTAGCAATTTGTCGATTTTCGTTGCTAAACAGGTTCGTGGAGACCTGCTAAAAGCTGAAGAGTATTGTGGAAGATCAATCTCTGCAAATCCTAATGATGGAAATGTGATATCAATTTATGCTGATTTGATATGGAAGAATCACAAGGATGCCTCCCGTGCTGAGAGCTACCATCTTCAAGCTGCTAAAACTTCCCCTGATGATAGGTAAGAAACAACAAGATACAATCATAAATCAAAGCTATATTGAAATTTTGTGGGAATCTGAAATTTTGATCTGCAATGAAGTCCTCTCTCTGCAAATTTGTTGCTATGTGGGACATTTTAATGGATTTGTGGGGCTAATGTTGTTTTTATTTGTTGAACTGGTGCAGTTTTGTTTTAGCCTCGTATGCGCGGTTCCTTTGGGATGCTGGAGAAGAAGTCGAGGACGACGACGACAACGAAGAAGATGGATTCGATAGCTTTGGCGAGCCATATTCTTCACGTCCTTTTGATTTTGGAGTTCAGCCTCTCAACTCACTCCTCTAACTGGTGCTTCTTAGTTTCTCTCTCAGGTACATTCATAGTTGCAGATGTTGTTAGGTAGTATTCTTTAACCATGAAAGCATAATAAGTTTGCTTACAGAAAGCTGTGGCAAGCACTAGGGATTTTCTTTTTCCCTCGCCTCTTTGATCCTCAGTTTGTGTTTTGTATAGAACAATGAAACAAATTGCTGATTGAAGGAAAATCCCAATTTGC

mRNA sequence

GGAGAGAAAGAGGGTTTTGTGGAATCCTAAAACCCTTTTCTTCTTCGTTCCCTCACAAGCTTCGATCGTTAATCATGCTTCTCAGAAGTGCGTCGACCTCAATTCTCAATCCATGGAAACCCCATTTGAAAGAAGCTTCCATGGAGGCCGAAATCGTCCACCAAATTCCTAAATCACGGTCCCTCACACTCTGTGCTTCTTCGAAATTGTTGCCGCCGCCGCCGATGATTGGTGGACCGGCGATTAACATGATGCGGACCCTCTCTGTGCCTGATCTGAGTAACCTCTCGGCGGTGGCGAAGAGGAGTCCGTTTTTGGATGGGGGATTGTGCTGTGGTGTTGCCGAAGTCGGGGAGAGTTCCGATTGCGGTGGCGGGATGGTCGGTGTTTCGGTTGATGGAGGAATCGGCTGCGATGGTTGCGGTGGCGATGGTGGTGGTTCGGATGGTGGCGATGATGGCTGCTTTGGTTCTTGGGATGCGGATCGTGAGAACGATTGGGCGGATCTGTATTATCAGAAAATGATAGAAGCGAATCCAGAGAATTCGTTGTTACTAAGCAATTATGCTCGATTCTTGATGGAGGTTCGTGGAGACCTGCTAAAAGCTGAAGAGTATTGTGGAAGATCAATCTCTGCAAATCCTAATGATGGAAATGTGATATCAATTTATGCTGATTTGATATGGAAGAATCACAAGGATGCCTCCCGTGCTGAGAGCTACCATCTTCAAGCTGCTAAAACTTCCCCTGATGATAGTTTTGTTTTAGCCTCGTATGCGCGGTTCCTTTGGGATGCTGGAGAAGAAGTCGAGGACGACGACGACAACGAAGAAGATGGATTCGATAGCTTTGGCGAGCCATATTCTTCACGTCCTTTTGATTTTGGAGTTCAGCCTCTCAACTCACTCCTCTAACTGGTGCTTCTTAGTTTCTCTCTCAGGTACATTCATAGTTGCAGATGTTGTTAGGTAGTATTCTTTAACCATGAAAGCATAATAAGTTTGCTTACAGAAAGCTGTGGCAAGCACTAGGGATTTTCTTTTTCCCTCGCCTCTTTGATCCTCAGTTTGTGTTTTGTATAGAACAATGAAACAAATTGCTGATTGAAGGAAAATCCCAATTTGC

Coding sequence (CDS)

ATGCTTCTCAGAAGTGCGTCGACCTCAATTCTCAATCCATGGAAACCCCATTTGAAAGAAGCTTCCATGGAGGCCGAAATCGTCCACCAAATTCCTAAATCACGGTCCCTCACACTCTGTGCTTCTTCGAAATTGTTGCCGCCGCCGCCGATGATTGGTGGACCGGCGATTAACATGATGCGGACCCTCTCTGTGCCTGATCTGAGTAACCTCTCGGCGGTGGCGAAGAGGAGTCCGTTTTTGGATGGGGGATTGTGCTGTGGTGTTGCCGAAGTCGGGGAGAGTTCCGATTGCGGTGGCGGGATGGTCGGTGTTTCGGTTGATGGAGGAATCGGCTGCGATGGTTGCGGTGGCGATGGTGGTGGTTCGGATGGTGGCGATGATGGCTGCTTTGGTTCTTGGGATGCGGATCGTGAGAACGATTGGGCGGATCTGTATTATCAGAAAATGATAGAAGCGAATCCAGAGAATTCGTTGTTACTAAGCAATTATGCTCGATTCTTGATGGAGGTTCGTGGAGACCTGCTAAAAGCTGAAGAGTATTGTGGAAGATCAATCTCTGCAAATCCTAATGATGGAAATGTGATATCAATTTATGCTGATTTGATATGGAAGAATCACAAGGATGCCTCCCGTGCTGAGAGCTACCATCTTCAAGCTGCTAAAACTTCCCCTGATGATAGTTTTGTTTTAGCCTCGTATGCGCGGTTCCTTTGGGATGCTGGAGAAGAAGTCGAGGACGACGACGACAACGAAGAAGATGGATTCGATAGCTTTGGCGAGCCATATTCTTCACGTCCTTTTGATTTTGGAGTTCAGCCTCTCAACTCACTCCTCTAA

Protein sequence

MLLRSASTSILNPWKPHLKEASMEAEIVHQIPKSRSLTLCASSKLLPPPPMIGGPAINMMRTLSVPDLSNLSAVAKRSPFLDGGLCCGVAEVGESSDCGGGMVGVSVDGGIGCDGCGGDGGGSDGGDDGCFGSWDADRENDWADLYYQKMIEANPENSLLLSNYARFLMEVRGDLLKAEEYCGRSISANPNDGNVISIYADLIWKNHKDASRAESYHLQAAKTSPDDSFVLASYARFLWDAGEEVEDDDDNEEDGFDSFGEPYSSRPFDFGVQPLNSLL

Homology

[Close]

BLAST of Carg10911 vs. NCBI nr
Match: KAG6599396.1 (hypothetical protein SDJN03_09174, partial [Cucurbita argyrosperma subsp. sororia] >KAG7030381.1 hypothetical protein SDJN02_08728 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 556.6 bits (1433), Expect = 1.2e-154
Identity = 279/279 (100.00%), Postives = 279/279 (100.00%), Query Frame = 0


Query: 1   MLLRSASTSILNPWKPHLKEASMEAEIVHQIPKSRSLTLCASSKLLPPPPMIGGPAINMM 60
           MLLRSASTSILNPWKPHLKEASMEAEIVHQIPKSRSLTLCASSKLLPPPPMIGGPAINMM
Sbjct: 1   MLLRSASTSILNPWKPHLKEASMEAEIVHQIPKSRSLTLCASSKLLPPPPMIGGPAINMM 60

Query: 61  RTLSVPDLSNLSAVAKRSPFLDGGLCCGVAEVGESSDCGGGMVGVSVDGGIGCDGCGGDG 120
           RTLSVPDLSNLSAVAKRSPFLDGGLCCGVAEVGESSDCGGGMVGVSVDGGIGCDGCGGDG
Sbjct: 61  RTLSVPDLSNLSAVAKRSPFLDGGLCCGVAEVGESSDCGGGMVGVSVDGGIGCDGCGGDG 120

Query: 121 GGSDGGDDGCFGSWDADRENDWADLYYQKMIEANPENSLLLSNYARFLMEVRGDLLKAEE 180
           GGSDGGDDGCFGSWDADRENDWADLYYQKMIEANPENSLLLSNYARFLMEVRGDLLKAEE
Sbjct: 121 GGSDGGDDGCFGSWDADRENDWADLYYQKMIEANPENSLLLSNYARFLMEVRGDLLKAEE 180

Query: 181 YCGRSISANPNDGNVISIYADLIWKNHKDASRAESYHLQAAKTSPDDSFVLASYARFLWD 240
           YCGRSISANPNDGNVISIYADLIWKNHKDASRAESYHLQAAKTSPDDSFVLASYARFLWD
Sbjct: 181 YCGRSISANPNDGNVISIYADLIWKNHKDASRAESYHLQAAKTSPDDSFVLASYARFLWD 240

Query: 241 AGEEVEDDDDNEEDGFDSFGEPYSSRPFDFGVQPLNSLL 280
           AGEEVEDDDDNEEDGFDSFGEPYSSRPFDFGVQPLNSLL
Sbjct: 241 AGEEVEDDDDNEEDGFDSFGEPYSSRPFDFGVQPLNSLL 279

[Close]

BLAST of Carg10911 vs. NCBI nr
Match: XP_023545630.1 (uncharacterized protein LOC111805006 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 533.1 bits (1372), Expect = 1.4e-147
Identity = 271/281 (96.44%), Postives = 275/281 (97.86%), Query Frame = 0


Query: 1   MLLRSASTSILNPWKPHLKEASMEAEIVHQIPKSRSLTLCASSKLLPPPPMIGGPAINMM 60
           MLLRSASTSILNPWKPHLKEASMEAEI HQIPKSR LTLCASSKLLPPPPMIGGPAINMM
Sbjct: 1   MLLRSASTSILNPWKPHLKEASMEAEIAHQIPKSRPLTLCASSKLLPPPPMIGGPAINMM 60

Query: 61  RTLSVPDLSNLSAVAKRSPFLDGGLCCGVAEVGESSDCGGGMVGVSVDGGIGCDGCGGDG 120
           RTLSVPDLSNLSAVAKRSPFL+GGL CGVAEVGESSDCGGGMVGVSVDGGIG DGCGGDG
Sbjct: 61  RTLSVPDLSNLSAVAKRSPFLNGGLFCGVAEVGESSDCGGGMVGVSVDGGIGRDGCGGDG 120

Query: 121 GGSDGGDDGCFGSWDADRENDWADLYYQKMIEANPENSLLLSNYARFLMEVRGDLLKAEE 180
           GGSDGGDDGCFGSWDADRENDWADLYYQKMIEANPENSLLLSNYARFLMEVRGDLLKAEE
Sbjct: 121 GGSDGGDDGCFGSWDADRENDWADLYYQKMIEANPENSLLLSNYARFLMEVRGDLLKAEE 180

Query: 181 YCGRSISANPNDGNVISIYADLIWKNHKDASRAESYHLQAAKTSPDDSFVLASYARFLWD 240
           YCGRSISANPNDGNVIS+YADLIWKNHKDASRAESYHLQAAKTSPDDSFVLASYARFLWD
Sbjct: 181 YCGRSISANPNDGNVISMYADLIWKNHKDASRAESYHLQAAKTSPDDSFVLASYARFLWD 240

Query: 241 AGEEVEDDDDNE--EDGFDSFGEPYSSRPFDFGVQPLNSLL 280
           AGEEVEDDDD++  EDGFDSFGEPYSSRPFDFGVQPLNSLL
Sbjct: 241 AGEEVEDDDDDDDKEDGFDSFGEPYSSRPFDFGVQPLNSLL 281

[Close]

BLAST of Carg10911 vs. NCBI nr
Match: XP_022946073.1 (uncharacterized protein LOC111450271 [Cucurbita moschata])

HSP 1 Score: 505.0 bits (1299), Expect = 4.2e-139
Identity = 259/280 (92.50%), Postives = 260/280 (92.86%), Query Frame = 0


Query: 1   MLLRSASTSILNPWKPHLKEASMEAEIVHQIPKSRSLTLCASSKLLPPPPMIGGPAINMM 60
           MLLRSASTSILNPWKPHLKEASMEAEIVHQIPKSRSLTLCASSKLLPPPPMIGGPAINMM
Sbjct: 1   MLLRSASTSILNPWKPHLKEASMEAEIVHQIPKSRSLTLCASSKLLPPPPMIGGPAINMM 60

Query: 61  RTLSVPDLSNLSAVAKRSPFLDGGLCCGVAEVGESSDCGGGMVGVSVDGGIGCDGCGGDG 120
           RTLSVPDLSNLSAVAKRSPFLDGGLCCGVAEVGESSD                  CGGDG
Sbjct: 61  RTLSVPDLSNLSAVAKRSPFLDGGLCCGVAEVGESSD------------------CGGDG 120

Query: 121 GGSDGGDDGCFGSWDADRENDWADLYYQKMIEANPENSLLLSNYARFLMEVRGDLLKAEE 180
           GGSDGGDDGCFGSWDADRENDWADLYYQKMIEANPENSLLLSNYARFLMEVRGDLLKAEE
Sbjct: 121 GGSDGGDDGCFGSWDADRENDWADLYYQKMIEANPENSLLLSNYARFLMEVRGDLLKAEE 180

Query: 181 YCGRSISANPNDGNVISIYADLIWKNHKDASRAESYHLQAAKTSPDDSFVLASYARFLWD 240
           YCGRSISANPNDGNVISIYADLIWKNHKDASRAESYHLQAAKTSPDDSFVLASYARFLWD
Sbjct: 181 YCGRSISANPNDGNVISIYADLIWKNHKDASRAESYHLQAAKTSPDDSFVLASYARFLWD 240

Query: 241 AGEEV-EDDDDNEEDGFDSFGEPYSSRPFDFGVQPLNSLL 280
           AGEEV +DDDD EEDGFDSFGEPYSSRPFDFGVQPLNSLL
Sbjct: 241 AGEEVKDDDDDEEEDGFDSFGEPYSSRPFDFGVQPLNSLL 262

[Close]

BLAST of Carg10911 vs. NCBI nr
Match: XP_022999169.1 (uncharacterized protein LOC111493633 isoform X1 [Cucurbita maxima])

HSP 1 Score: 501.1 bits (1289), Expect = 6.1e-138
Identity = 255/274 (93.07%), Postives = 267/274 (97.45%), Query Frame = 0


Query: 1   MLLRSASTSILNPWKPHLKEASMEAEIVHQIPKSRSLTLCASSKLLPPPPMIGGPAINMM 60
           MLLRSASTSILNPWKPHLKE+SMEAEIV+QI KSRSLTLCASSKLLPPP +IGGPAINMM
Sbjct: 1   MLLRSASTSILNPWKPHLKESSMEAEIVNQISKSRSLTLCASSKLLPPPLIIGGPAINMM 60

Query: 61  RTLSVPDLSNLSAVAKRSPFLDGGLCCGVAEVGESSDCGGGMVGVSVDGGIGCDGCGGDG 120
           RTLSVPDLSNLSAVAKRSPFL+GGLCCG+A+V  SSDCGGG+VGVSVDGGIG DGCGGDG
Sbjct: 61  RTLSVPDLSNLSAVAKRSPFLNGGLCCGIAKVRGSSDCGGGVVGVSVDGGIGRDGCGGDG 120

Query: 121 GGSDGGDDGCFGSWDADRENDWADLYYQKMIEANPENSLLLSNYARFLMEVRGDLLKAEE 180
           GGSDGGDDGCFGSWDADRENDWADLYYQKMIEANPENSLLLSNYARFLMEVRGDLLKAEE
Sbjct: 121 GGSDGGDDGCFGSWDADRENDWADLYYQKMIEANPENSLLLSNYARFLMEVRGDLLKAEE 180

Query: 181 YCGRSISANPNDGNVISIYADLIWKNHKDASRAESYHLQAAKTSPDDSFVLASYARFLWD 240
           YCGRSISANPNDGNVIS+YADLIWKNHKDASRAESYHLQAAKTSPDDSFVLASYA+FLWD
Sbjct: 181 YCGRSISANPNDGNVISMYADLIWKNHKDASRAESYHLQAAKTSPDDSFVLASYAQFLWD 240

Query: 241 AGEEVEDDDDNEEDGFDSFGEPYSSRPFDFGVQP 275
           AGEEV+DD+D EEDGFDSFG+P SSRPFDFGVQP
Sbjct: 241 AGEEVKDDND-EEDGFDSFGKPCSSRPFDFGVQP 273

[Close]

BLAST of Carg10911 vs. NCBI nr
Match: XP_022999170.1 (uncharacterized protein LOC111493633 isoform X2 [Cucurbita maxima])

HSP 1 Score: 463.8 bits (1192), Expect = 1.1e-126
Identity = 239/274 (87.23%), Postives = 250/274 (91.24%), Query Frame = 0


Query: 1   MLLRSASTSILNPWKPHLKEASMEAEIVHQIPKSRSLTLCASSKLLPPPPMIGGPAINMM 60
           MLLRSASTSILNPWKPHLKE+SMEAEIV+QI KSRSLTLCASSKLLPPP +IGGPAINMM
Sbjct: 1   MLLRSASTSILNPWKPHLKESSMEAEIVNQISKSRSLTLCASSKLLPPPLIIGGPAINMM 60

Query: 61  RTLSVPDLSNLSAVAKRSPFLDGGLCCGVAEVGESSDCGGGMVGVSVDGGIGCDGCGGDG 120
           RTLSVPDLSNLSAVAKRSPFL+GGLCCG+A+V  SSD                  CGGDG
Sbjct: 61  RTLSVPDLSNLSAVAKRSPFLNGGLCCGIAKVRGSSD------------------CGGDG 120

Query: 121 GGSDGGDDGCFGSWDADRENDWADLYYQKMIEANPENSLLLSNYARFLMEVRGDLLKAEE 180
           GGSDGGDDGCFGSWDADRENDWADLYYQKMIEANPENSLLLSNYARFLMEVRGDLLKAEE
Sbjct: 121 GGSDGGDDGCFGSWDADRENDWADLYYQKMIEANPENSLLLSNYARFLMEVRGDLLKAEE 180

Query: 181 YCGRSISANPNDGNVISIYADLIWKNHKDASRAESYHLQAAKTSPDDSFVLASYARFLWD 240
           YCGRSISANPNDGNVIS+YADLIWKNHKDASRAESYHLQAAKTSPDDSFVLASYA+FLWD
Sbjct: 181 YCGRSISANPNDGNVISMYADLIWKNHKDASRAESYHLQAAKTSPDDSFVLASYAQFLWD 240

Query: 241 AGEEVEDDDDNEEDGFDSFGEPYSSRPFDFGVQP 275
           AGEEV+DD+D EEDGFDSFG+P SSRPFDFGVQP
Sbjct: 241 AGEEVKDDND-EEDGFDSFGKPCSSRPFDFGVQP 255

[Close]

BLAST of Carg10911 vs. ExPASy TrEMBL
Match: A0A6J1G2S9 (uncharacterized protein LOC111450271 OS=Cucurbita moschata OX=3662 GN=LOC111450271 PE=4 SV=1)

HSP 1 Score: 505.0 bits (1299), Expect = 2.0e-139
Identity = 259/280 (92.50%), Postives = 260/280 (92.86%), Query Frame = 0


Query: 1   MLLRSASTSILNPWKPHLKEASMEAEIVHQIPKSRSLTLCASSKLLPPPPMIGGPAINMM 60
           MLLRSASTSILNPWKPHLKEASMEAEIVHQIPKSRSLTLCASSKLLPPPPMIGGPAINMM
Sbjct: 1   MLLRSASTSILNPWKPHLKEASMEAEIVHQIPKSRSLTLCASSKLLPPPPMIGGPAINMM 60

Query: 61  RTLSVPDLSNLSAVAKRSPFLDGGLCCGVAEVGESSDCGGGMVGVSVDGGIGCDGCGGDG 120
           RTLSVPDLSNLSAVAKRSPFLDGGLCCGVAEVGESSD                  CGGDG
Sbjct: 61  RTLSVPDLSNLSAVAKRSPFLDGGLCCGVAEVGESSD------------------CGGDG 120

Query: 121 GGSDGGDDGCFGSWDADRENDWADLYYQKMIEANPENSLLLSNYARFLMEVRGDLLKAEE 180
           GGSDGGDDGCFGSWDADRENDWADLYYQKMIEANPENSLLLSNYARFLMEVRGDLLKAEE
Sbjct: 121 GGSDGGDDGCFGSWDADRENDWADLYYQKMIEANPENSLLLSNYARFLMEVRGDLLKAEE 180

Query: 181 YCGRSISANPNDGNVISIYADLIWKNHKDASRAESYHLQAAKTSPDDSFVLASYARFLWD 240
           YCGRSISANPNDGNVISIYADLIWKNHKDASRAESYHLQAAKTSPDDSFVLASYARFLWD
Sbjct: 181 YCGRSISANPNDGNVISIYADLIWKNHKDASRAESYHLQAAKTSPDDSFVLASYARFLWD 240

Query: 241 AGEEV-EDDDDNEEDGFDSFGEPYSSRPFDFGVQPLNSLL 280
           AGEEV +DDDD EEDGFDSFGEPYSSRPFDFGVQPLNSLL
Sbjct: 241 AGEEVKDDDDDEEEDGFDSFGEPYSSRPFDFGVQPLNSLL 262

[Close]

BLAST of Carg10911 vs. ExPASy TrEMBL
Match: A0A6J1KGA4 (uncharacterized protein LOC111493633 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111493633 PE=4 SV=1)

HSP 1 Score: 501.1 bits (1289), Expect = 2.9e-138
Identity = 255/274 (93.07%), Postives = 267/274 (97.45%), Query Frame = 0


Query: 1   MLLRSASTSILNPWKPHLKEASMEAEIVHQIPKSRSLTLCASSKLLPPPPMIGGPAINMM 60
           MLLRSASTSILNPWKPHLKE+SMEAEIV+QI KSRSLTLCASSKLLPPP +IGGPAINMM
Sbjct: 1   MLLRSASTSILNPWKPHLKESSMEAEIVNQISKSRSLTLCASSKLLPPPLIIGGPAINMM 60

Query: 61  RTLSVPDLSNLSAVAKRSPFLDGGLCCGVAEVGESSDCGGGMVGVSVDGGIGCDGCGGDG 120
           RTLSVPDLSNLSAVAKRSPFL+GGLCCG+A+V  SSDCGGG+VGVSVDGGIG DGCGGDG
Sbjct: 61  RTLSVPDLSNLSAVAKRSPFLNGGLCCGIAKVRGSSDCGGGVVGVSVDGGIGRDGCGGDG 120

Query: 121 GGSDGGDDGCFGSWDADRENDWADLYYQKMIEANPENSLLLSNYARFLMEVRGDLLKAEE 180
           GGSDGGDDGCFGSWDADRENDWADLYYQKMIEANPENSLLLSNYARFLMEVRGDLLKAEE
Sbjct: 121 GGSDGGDDGCFGSWDADRENDWADLYYQKMIEANPENSLLLSNYARFLMEVRGDLLKAEE 180

Query: 181 YCGRSISANPNDGNVISIYADLIWKNHKDASRAESYHLQAAKTSPDDSFVLASYARFLWD 240
           YCGRSISANPNDGNVIS+YADLIWKNHKDASRAESYHLQAAKTSPDDSFVLASYA+FLWD
Sbjct: 181 YCGRSISANPNDGNVISMYADLIWKNHKDASRAESYHLQAAKTSPDDSFVLASYAQFLWD 240

Query: 241 AGEEVEDDDDNEEDGFDSFGEPYSSRPFDFGVQP 275
           AGEEV+DD+D EEDGFDSFG+P SSRPFDFGVQP
Sbjct: 241 AGEEVKDDND-EEDGFDSFGKPCSSRPFDFGVQP 273

[Close]

BLAST of Carg10911 vs. ExPASy TrEMBL
Match: A0A6J1KEK4 (uncharacterized protein LOC111493633 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111493633 PE=4 SV=1)

HSP 1 Score: 463.8 bits (1192), Expect = 5.2e-127
Identity = 239/274 (87.23%), Postives = 250/274 (91.24%), Query Frame = 0


Query: 1   MLLRSASTSILNPWKPHLKEASMEAEIVHQIPKSRSLTLCASSKLLPPPPMIGGPAINMM 60
           MLLRSASTSILNPWKPHLKE+SMEAEIV+QI KSRSLTLCASSKLLPPP +IGGPAINMM
Sbjct: 1   MLLRSASTSILNPWKPHLKESSMEAEIVNQISKSRSLTLCASSKLLPPPLIIGGPAINMM 60

Query: 61  RTLSVPDLSNLSAVAKRSPFLDGGLCCGVAEVGESSDCGGGMVGVSVDGGIGCDGCGGDG 120
           RTLSVPDLSNLSAVAKRSPFL+GGLCCG+A+V  SSD                  CGGDG
Sbjct: 61  RTLSVPDLSNLSAVAKRSPFLNGGLCCGIAKVRGSSD------------------CGGDG 120

Query: 121 GGSDGGDDGCFGSWDADRENDWADLYYQKMIEANPENSLLLSNYARFLMEVRGDLLKAEE 180
           GGSDGGDDGCFGSWDADRENDWADLYYQKMIEANPENSLLLSNYARFLMEVRGDLLKAEE
Sbjct: 121 GGSDGGDDGCFGSWDADRENDWADLYYQKMIEANPENSLLLSNYARFLMEVRGDLLKAEE 180

Query: 181 YCGRSISANPNDGNVISIYADLIWKNHKDASRAESYHLQAAKTSPDDSFVLASYARFLWD 240
           YCGRSISANPNDGNVIS+YADLIWKNHKDASRAESYHLQAAKTSPDDSFVLASYA+FLWD
Sbjct: 181 YCGRSISANPNDGNVISMYADLIWKNHKDASRAESYHLQAAKTSPDDSFVLASYAQFLWD 240

Query: 241 AGEEVEDDDDNEEDGFDSFGEPYSSRPFDFGVQP 275
           AGEEV+DD+D EEDGFDSFG+P SSRPFDFGVQP
Sbjct: 241 AGEEVKDDND-EEDGFDSFGKPCSSRPFDFGVQP 255

[Close]

BLAST of Carg10911 vs. ExPASy TrEMBL
Match: A0A6J1CN93 (uncharacterized protein LOC111013150 OS=Momordica charantia OX=3673 GN=LOC111013150 PE=4 SV=1)

HSP 1 Score: 315.1 bits (806), Expect = 3.0e-82
Identity = 183/298 (61.41%), Postives = 206/298 (69.13%), Query Frame = 0


Query: 1   MLLRSASTSILNPWKPHLKEASMEAEIVHQIPKSRSLTLCASSKLLPPPPMIGGPAIN-M 60
           MLLRSAST ILN WKP LKE S EAEIV Q PKSR ++LCASSK  PP PMIGG   + M
Sbjct: 1   MLLRSASTPILNSWKPQLKETSPEAEIVLQFPKSRPVSLCASSKSSPPHPMIGGSGNHKM 60

Query: 61  MRTLSVPDLSNL-----------------------SAVAKRSPFLDGGLCCGVAEVGESS 120
           MR  S  DLSNL                       +  + R  FLDGGLCC V E     
Sbjct: 61  MRIRSESDLSNLPVEKNTPSMELLRRFHEIEEREEAVESTRMAFLDGGLCCSVDE----- 120

Query: 121 DCGGGMVGVSVDGGIGCDGCGGDGGGSDGGDDGCFGSWDADRENDWADLYYQKMIEANPE 180
                       GG+G  GCG  GGGSDGG DGC GSWD++ END  DLYYQKMIEANPE
Sbjct: 121 ------------GGVGGVGCG--GGGSDGGGDGCSGSWDSNHENDRTDLYYQKMIEANPE 180

Query: 181 NSLLLSNYARFLMEVRGDLLKAEEYCGRSISANPNDGNVISIYADLIWKNHKDASRAESY 240
           NSLLLSNYA FL EV GDL+KAEEYCG++I ANPNDG+V+S+YADLIW+NHKDASRAESY
Sbjct: 181 NSLLLSNYALFLKEVCGDLIKAEEYCGKAILANPNDGDVLSMYADLIWENHKDASRAESY 240

Query: 241 HLQAAKTSPDDSFVLASYARFLWDAGEEVEDDDDNEEDGFDSFGEPYSSRPFDFGVQP 275
           + QA K SPD+ +VLASYARFLWDA EE ++D++  ED  DSFG+P SS PF FGVQP
Sbjct: 241 YDQATKASPDNCYVLASYARFLWDAEEEEDEDNEEVEDRVDSFGKP-SSPPFVFGVQP 278

[Close]

BLAST of Carg10911 vs. ExPASy TrEMBL
Match: A0A0A0LL02 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G006810 PE=4 SV=1)

HSP 1 Score: 297.0 bits (759), Expect = 8.4e-77
Identity = 171/276 (61.96%), Postives = 198/276 (71.74%), Query Frame = 0


Query: 1   MLLRSASTSILNPWKPHLKEASMEAEIVHQIPKSRSLTLCASSKLLPPPPMIGGPAINMM 60
           MLL+S ST ILN WKPH KE+S E  I+HQ  KSR  TL ASSKLLP P MIGG AI  M
Sbjct: 1   MLLKSPSTPILNTWKPHFKESSPETVILHQFCKSRLPTLSASSKLLPAPCMIGGQAIKTM 60

Query: 61  RTLSVPDLSNLSAVAKRSP---FLDGGLCCGVAEVGESSDCGGGMVGVSVDGGIGCDGCG 120
                  LSN+S VAKR P    LD GLCCGV +VGESSDCGG MVG  VDG +  DGC 
Sbjct: 61  -------LSNISVVAKRIPRMAVLDEGLCCGVDDVGESSDCGGEMVGGFVDGKVNRDGC- 120

Query: 121 GDGGGSDGGDDGCFGSWDADRENDWADLYYQKMIEANPENSLLLSNYARFLMEVRGDLLK 180
               G+D G+ GCF SWD D E D A++++Q+MI+ NP++SLLLSNYA+FL EVRGDL+K
Sbjct: 121 ---NGNDNGNGGCFVSWDGDTEEDMAEMHFQRMIKTNPKDSLLLSNYAQFLKEVRGDLIK 180

Query: 181 AEEYCGRSISANPNDGNVISIYADLIWKNHKDASRAESYHLQAAKTSPDDSFVLASYARF 240
           AEEYCGR++ A  N+G+VIS+YADLIW N+ DASRAESYHLQA KTSPD+SFV A+YARF
Sbjct: 181 AEEYCGRAMLARGNNGSVISMYADLIWSNYMDASRAESYHLQATKTSPDNSFVFAAYARF 240

Query: 241 LWDAGEEVEDDDDNEEDGFDSFGEPYSSRPFDFGVQ 274
           LW    EVE + D  E   DSFG    S P  FG Q
Sbjct: 241 LW----EVEKEVDKGEAETDSFGGNPFSPPPCFGPQ 261

[Close]

BLAST of Carg10911 vs. TAIR 10
Match: AT5G20190.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 172.2 bits (435), Expect = 6.0e-43
Identity = 129/306 (42.16%), Postives = 170/306 (55.56%), Query Frame = 0


Query: 1   MLLRSASTSILNPWKPHL---KEASME-AEIVHQIPKSRSLTLCASSKLLPPPPM----I 60
           MLLRSAST +LN    H+   +++ +E  E VHQI + RS+TL ASS      PM     
Sbjct: 1   MLLRSASTPLLNS-LVHVSSPRDSPIETVESVHQIQRHRSITLSASSSSCCYSPMSVHSS 60

Query: 61  GGPAINMMRTLSVPDLSNLSAVAKR-SPFLDGGLCCGVAEVG------------------ 120
              +  M RT S  DL +L++     S FL GG      + G                  
Sbjct: 61  DDSSRRMKRTASDSDLRHLTSTKPPVSKFLSGGALMEDVDEGIGFGLIRTSSYDGISWAL 120

Query: 121 -ESSDCGGGMVGVSVDGGIGCDGCGGDGGGSDGGDDGCFGSWDADRENDWADLYYQKMIE 180
            E ++  GG  G    GG    G G  GG SDGGD G          +D  D++Y+KMIE
Sbjct: 121 DEDTEVAGGGGGGMFHGG----GKGRSGGRSDGGDGG----------DDNTDVHYRKMIE 180

Query: 181 ANPENSLLLSNYARFLMEVRGDLLKAEEYCGRSISANPNDGNVISIYADLIWKNHKDASR 240
           ANP N + LSNYA+FL EVR D LKAEEYCGR+I  +PNDGNV+++YA+L+WK HKD+SR
Sbjct: 181 ANPGNGIFLSNYAKFLKEVRKDYLKAEEYCGRAILVSPNDGNVLAMYAELVWKIHKDSSR 240

Query: 241 AESYHLQAAKTSPDDSFVLASYARFLWDAGEEVEDDDDNEEDGFDSFGEPYSSRPFDFGV 279
           AE+Y  QA   +P+D +V ASYARFLWDA  E E++++ EE   +      S   F  G 
Sbjct: 241 AENYFNQAVAAAPEDCYVQASYARFLWDA--EEEEEEEKEERHEEELEHQTSRMNFFTGP 289

[Close]

BLAST of Carg10911 vs. TAIR 10
Match: AT1G80130.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 147.9 bits (372), Expect = 1.2e-35
Identity = 118/288 (40.97%), Postives = 147/288 (51.04%), Query Frame = 0


Query: 1   MLLRSASTSILNPWKPH--LKEASMEAEIVHQIPKSRSLTLCASS--------------- 60
           MLLRS S  ILN W P    +E+S E E      +S SL+L +S                
Sbjct: 1   MLLRSTSAPILNSWLPQHCSRESSPEPE-SQLWRRSTSLSLFSSKSIDGHTGEQLHQALS 60

Query: 61  --------KLLPPPPMIGGPAINMMRTLSVPDLSNLSAVAKR-SPFLDGGL--CCGVAEV 120
                   K          P  +  R  S+ +         R SPFL   L    G  + 
Sbjct: 61  DNKEIIILKSKSNEHSYKTPTSSRQRRSSLDETRYTKKTLDRSSPFLVERLFSSSGQGDK 120

Query: 121 GESSD-----CGGGMVGVSVDGGIGCDGCGGDGG-GSDGGDDGCFGSWDADRENDWADLY 180
             S+D       GG  G+   GG  C+G GG GG G DGG           R  D  D Y
Sbjct: 121 ASSNDRLETLVSGGGGGMGGSGGNICNGGGGVGGSGVDGG-----------RSEDATDTY 180

Query: 181 YQKMIEANPENSLLLSNYARFLMEVRGDLLKAEEYCGRSISANPNDGNVISIYADLIWKN 240
           Y++MI++NP NSLL  NYA+FL EV+GD+ KAEEYC R+I  N NDGNV+S+YADLI  N
Sbjct: 181 YREMIDSNPGNSLLTGNYAKFLKEVKGDMKKAEEYCERAILGNTNDGNVLSLYADLILHN 240

Query: 241 HKDASRAESYHLQAAKTSPDDSFVLASYARFLWDAGEEVEDDDDNEED 255
           H+D  RA SY+ QA K SP+D +V ASYARFLWD  E+ ED+   EE+
Sbjct: 241 HQDRQRAHSYYKQAVKMSPEDCYVQASYARFLWDVDEDEEDEALGEEE 276

[Close]

BLAST of Carg10911 vs. TAIR 10
Match: AT4G32340.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 138.7 bits (348), Expect = 7.4e-33
Identity = 82/150 (54.67%), Postives = 102/150 (68.00%), Query Frame = 0


Query: 109 GGIGCDGCGGDGGGSDGGDDGCFGSWDADRENDWADLYYQKMIEANPENSLLLSNYARFL 168
           GG G DG GG GGG  G  DG                YY++MI+  P ++LLLSNYARFL
Sbjct: 92  GGRGGDGAGGGGGGGGGSVDG----------------YYEEMIQRYPGDTLLLSNYARFL 151

Query: 169 MEVRGDLLKAEEYCGRS-ISANPNDGNVISIYADLIWKNHKDASRAESYHLQAAKTSPDD 228
            EV+GD  KAEEYC R+ +S +  DG ++S+Y DLIWKNH D  RA+SY+ QA ++SPDD
Sbjct: 152 KEVKGDGRKAEEYCERAMLSESGRDGELLSMYGDLIWKNHGDGVRAQSYYDQAVQSSPDD 211

Query: 229 SFVLASYARFLWDAGEEVEDDDD-NEEDGF 257
             VLASYARFLWDA EEVE+++  + EDGF
Sbjct: 212 CNVLASYARFLWDAEEEVEEEESKHHEDGF 225

[Close]

BLAST of Carg10911 vs. TAIR 10
Match: AT4G17940.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 114.8 bits (286), Expect = 1.1e-25
Identity = 73/172 (42.44%), Postives = 95/172 (55.23%), Query Frame = 0


Query: 83  GGLCCGVAEVGESSDCGGGMVGVSVDGGIGCDGCGGDGGGSDGGDDGCFGSWDADRENDW 142
           G +  G   V E    GGG     V GG G  G  G+GGG    D    G          
Sbjct: 107 GSMISGGLPVEEKCFTGGG-----VGGGSGYSGGYGNGGGGGYEDKSKIGD--------- 166

Query: 143 ADLYYQKMIEANPENSLLLSNYARFLMEVRGDLLKAEEYCGRSISANPNDGNVISIYADL 202
              YY++M+ +NP NSLLL NY +FL EV  D   AEEY GR+I  NP DG  +S+Y  L
Sbjct: 167 ---YYREMLRSNPNNSLLLMNYGKFLYEVEKDAEGAEEYYGRAILENPGDGEALSMYGRL 226

Query: 203 IWKNHKDASRAESYHLQAAKTSPDDSFVLASYARFLWDAGEEVEDDDDNEED 255
           IW+  +D  RA+ Y  QA   SP+D  VL SYARF+W+A ++ +DD++ EE+
Sbjct: 227 IWETKRDEKRAQGYFDQAVNASPNDCMVLGSYARFMWEAEDDDDDDEEEEEE 261

[Close]

BLAST of Carg10911 vs. TAIR 10
Match: AT1G04530.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 102.1 bits (253), Expect = 7.6e-22
Identity = 51/109 (46.79%), Postives = 73/109 (66.97%), Query Frame = 0


Query: 146 YYQKMIEANPENSLLLSNYARFLMEVRGDLLKAEEYCGRSISANPNDGNVISIYADLIWK 205
           YY+ M+E  P + LLL NYA+FL E +GDL  AEEY  +     P+DG  ++ Y  L+ K
Sbjct: 124 YYKGMLEEYPLHPLLLKNYAKFL-EYKGDLSGAEEYYHKCTVVEPSDGVALANYGRLVMK 183

Query: 206 NHKDASRAESYHLQAAKTSPDDSFVLASYARFLWDAGEEVEDDDDNEED 255
            H+D ++A SY  +A + SPDDS VLA+YA FLW+   + +D+DD+E+D
Sbjct: 184 LHQDEAKAMSYFERAVQASPDDSIVLAAYASFLWEINADDDDEDDDEDD 231

The following BLAST results are available for this feature:

BLAST of Carg10911 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6599396.1	1.2e-154	100.00	hypothetical protein SDJN03_09174, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023545630.1	1.4e-147	96.44	uncharacterized protein LOC111805006 [Cucurbita pepo subsp. pepo]	[more]
XP_022946073.1	4.2e-139	92.50	uncharacterized protein LOC111450271 [Cucurbita moschata]	[more]
XP_022999169.1	6.1e-138	93.07	uncharacterized protein LOC111493633 isoform X1 [Cucurbita maxima]	[more]
XP_022999170.1	1.1e-126	87.23	uncharacterized protein LOC111493633 isoform X2 [Cucurbita maxima]	[more]

BLAST of Carg10911 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg10911 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G2S9	2.0e-139	92.50	uncharacterized protein LOC111450271 OS=Cucurbita moschata OX=3662 GN=LOC1114502...	[more]
A0A6J1KGA4	2.9e-138	93.07	uncharacterized protein LOC111493633 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1KEK4	5.2e-127	87.23	uncharacterized protein LOC111493633 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1CN93	3.0e-82	61.41	uncharacterized protein LOC111013150 OS=Momordica charantia OX=3673 GN=LOC111013...	[more]
A0A0A0LL02	8.4e-77	61.96	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G006810 PE=4 SV=1	[more]

BLAST of Carg10911 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G20190.1	6.0e-43	42.16	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G80130.1	1.2e-35	40.97	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G32340.1	7.4e-33	54.67	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G17940.1	1.1e-25	42.44	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G04530.1	7.6e-22	46.79	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 137..251 e-value: 9.4E-12 score: 46.7
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 143..243
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 244..279
None	No IPR available	PANTHER	PTHR26312:SF73	TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN	coord: 1..251
None	No IPR available	PANTHER	PTHR26312	TETRATRICOPEPTIDE REPEAT PROTEIN 5	coord: 1..251

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg10911-RA	Carg10911-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding